DNA-directed RNA polymerase III subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 334 |
| Acc36I | ACCTGC | 1 cut(s) | 334 |
| AccB1I | GGYRCC | 1 cut(s) | 295 |
| AciI | CCGC | 1 cut(s) | 340 |
| AgsI | TTSAA | 3 cut(s) | 139, 233, 333 |
| AluBI | AGCT | 1 cut(s) | 112 |
| AluI | AGCT | 1 cut(s) | 112 |
| AseI | ATTAAT | 1 cut(s) | 155 |
| AsuHPI | GGTGA | 1 cut(s) | 358 |
| BaeGI | GKGCMC | 1 cut(s) | 300 |
| BanI | GGYRCC | 1 cut(s) | 295 |
| BanII | GRGCYC | 1 cut(s) | 57 |
| BfaI | CTAG | 3 cut(s) | 113, 312, 324 |
| BfuAI | ACCTGC | 1 cut(s) | 334 |
| BisI | GCNGC | 1 cut(s) | 341 |
| BlsI | GCNGC | 1 cut(s) | 342 |
| BmiI | GGNNCC | 1 cut(s) | 297 |
| BmrI | ACTGGG | 1 cut(s) | 294 |
| BmsI | GCATC | 1 cut(s) | 79 |
| BmuI | ACTGGG | 1 cut(s) | 294 |
| BplI | GAGNNNNNCTC | 3 cut(s) | 397, 429, 422 |
| Bpu10I | CCTNAGC | 1 cut(s) | 45 |
| Bse1I | ACTGG | 2 cut(s) | 300, 400 |
| BseGI | GGATG | 1 cut(s) | 232 |
| BseMII | CTCAG | 3 cut(s) | 99, 231, 428 |
| BseNI | ACTGG | 2 cut(s) | 300, 400 |
| BseSI | GKGCMC | 1 cut(s) | 300 |
| BshNI | GGYRCC | 1 cut(s) | 295 |
| BslFI | GGGAC | 1 cut(s) | 383 |
| BsmFI | GGGAC | 1 cut(s) | 383 |
| Bsp1286I | GDGCHC | 2 cut(s) | 57, 300 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspACI | CCGC | 1 cut(s) | 340 |
| BspCNI | CTCAG | 3 cut(s) | 100, 232, 427 |
| BspLI | GGNNCC | 1 cut(s) | 297 |
| BspMI | ACCTGC | 1 cut(s) | 334 |
| BspQI | GCTCTTC | 1 cut(s) | 45 |
| BspT107I | GGYRCC | 1 cut(s) | 295 |
| BsrI | ACTGG | 2 cut(s) | 300, 400 |
| BssMI | GATC | 1 cut(s) | 115 |
| Bst4CI | ACNGT | 1 cut(s) | 288 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstDEI | CTNAG | 5 cut(s) | 45, 108, 240, 261, 414 |
| BstF5I | GGATG | 1 cut(s) | 232 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 41, 61, 405, 432 |
| BstNSI | RCATGY | 2 cut(s) | 9, 35 |
| BstSLI | GKGCMC | 1 cut(s) | 300 |
| BtsCI | GGATG | 1 cut(s) | 232 |
| BveI | ACCTGC | 1 cut(s) | 334 |
| CviAII | CATG | 2 cut(s) | 6, 32 |
| CviJI | RGCY | 6 cut(s) | 55, 112, 178, 260, 399, 435 |
| CviKI_1 | RGCY | 6 cut(s) | 55, 112, 178, 260, 399, 435 |
| DdeI | CTNAG | 5 cut(s) | 45, 108, 240, 261, 414 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco24I | GRGCYC | 1 cut(s) | 57 |
| EcoT38I | GRGCYC | 1 cut(s) | 57 |
| FaeI | CATG | 2 cut(s) | 9, 35 |
| FaiI | YATR | 7 cut(s) | 7, 27, 33, 195, 305, 402, 404 |
| FaqI | GGGAC | 1 cut(s) | 383 |
| FatI | CATG | 2 cut(s) | 5, 31 |
| Fnu4HI | GCNGC | 1 cut(s) | 341 |
| FokI | GGATG | 1 cut(s) | 239 |
| FriOI | GRGCYC | 1 cut(s) | 57 |
| Fsp4HI | GCNGC | 1 cut(s) | 341 |
| FspBI | CTAG | 3 cut(s) | 113, 312, 324 |
| GluI | GCNGC | 1 cut(s) | 341 |
| Hin1II | CATG | 2 cut(s) | 9, 35 |
| HinfI | GANTC | 1 cut(s) | 275 |
| HphI | GGTGA | 1 cut(s) | 358 |
| Hpy188I | TCNGA | 6 cut(s) | 109, 161, 171, 190, 241, 417 |
| Hpy188III | TCNNGA | 2 cut(s) | 200, 391 |
| HpyAV | CCTTC | 2 cut(s) | 133, 451 |
| HpyCH4III | ACNGT | 1 cut(s) | 288 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 41, 61, 405, 432 |
| HpyF3I | CTNAG | 5 cut(s) | 45, 108, 240, 261, 414 |
| Hsp92II | CATG | 2 cut(s) | 9, 35 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LguI | GCTCTTC | 1 cut(s) | 45 |
| LpnPI | CCDG | 7 cut(s) | 84, 99, 106, 313, 329, 381, 404 |
| LweI | GCATC | 1 cut(s) | 79 |
| MaeI | CTAG | 3 cut(s) | 113, 312, 324 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 2 cut(s) | 62, 158 |
| MhlI | GDGCHC | 2 cut(s) | 57, 300 |
| MluCI | AATT | 2 cut(s) | 172, 270 |
| MnlI | CCTC | 6 cut(s) | 5, 14, 89, 136, 320, 424 |
| MseI | TTAA | 3 cut(s) | 155, 363, 422 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 41, 61, 405, 432 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 2 cut(s) | 9, 35 |
| NlaIV | GGNNCC | 1 cut(s) | 297 |
| NspI | RCATGY | 2 cut(s) | 9, 35 |
| PaqCI | CACCTGC | 1 cut(s) | 334 |
| PciSI | GCTCTTC | 1 cut(s) | 45 |
| PfeI | GAWTC | 1 cut(s) | 275 |
| PkrI | GCNGC | 1 cut(s) | 342 |
| PshBI | ATTAAT | 1 cut(s) | 155 |
| PspN4I | GGNNCC | 1 cut(s) | 297 |
| SapI | GCTCTTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 3 cut(s) | 155, 363, 422 |
| SatI | GCNGC | 1 cut(s) | 341 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| SduI | GDGCHC | 2 cut(s) | 57, 300 |
| SetI | ASST | 7 cut(s) | 16, 88, 100, 114, 136, 331, 348 |
| SfaNI | GCATC | 1 cut(s) | 79 |
| Sse9I | AATT | 2 cut(s) | 172, 270 |
| SsiI | CCGC | 1 cut(s) | 340 |
| SspMI | CTAG | 3 cut(s) | 113, 312, 324 |
| TaaI | ACNGT | 1 cut(s) | 288 |
| TasI | AATT | 2 cut(s) | 172, 270 |
| TauI | GCSGC | 1 cut(s) | 343 |
| TfiI | GAWTC | 1 cut(s) | 275 |
| Tru1I | TTAA | 3 cut(s) | 155, 363, 422 |
| Tru9I | TTAA | 3 cut(s) | 155, 363, 422 |
| TspDTI | ATGAA | 2 cut(s) | 68, 197 |
| TspGWI | ACGGA | 1 cut(s) | 391 |
| VspI | ATTAAT | 1 cut(s) | 155 |
| XceI | RCATGY | 2 cut(s) | 9, 35 |
| XspI | CTAG | 3 cut(s) | 113, 312, 324 |