26S proteasome non-ATPase regulatory subunit
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| JAB | PF01398 | 25 - 74 | 7.4e-10 | JAB1/Mov34/MPN/PAD-1 ubiquitin protease |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 73 |
| AccI | GTMKAC | 1 cut(s) | 87 |
| AjnI | CCWGG | 1 cut(s) | 134 |
| AoxI | GGCC | 2 cut(s) | 40, 102 |
| AspS9I | GGNCC | 2 cut(s) | 40, 103 |
| AsuHPI | GGTGA | 3 cut(s) | 51, 90, 182 |
| BccI | CCATC | 1 cut(s) | 157 |
| BceAI | ACGGC | 1 cut(s) | 205 |
| BciT130I | CCWGG | 1 cut(s) | 136 |
| BfuAI | ACCTGC | 1 cut(s) | 73 |
| Bme1390I | CCNGG | 1 cut(s) | 136 |
| BmgT120I | GGNCC | 2 cut(s) | 40, 103 |
| BmiI | GGNNCC | 1 cut(s) | 141 |
| BmrFI | CCNGG | 1 cut(s) | 136 |
| BmsI | GCATC | 1 cut(s) | 12 |
| BpuEI | CTTGAG | 1 cut(s) | 104 |
| BsaJI | CCNNGG | 1 cut(s) | 135 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 90, 120 |
| Bse118I | RCCGGY | 1 cut(s) | 100 |
| Bse3DI | GCAATG | 1 cut(s) | 222 |
| BseBI | CCWGG | 1 cut(s) | 136 |
| BseDI | CCNNGG | 1 cut(s) | 135 |
| BseGI | GGATG | 2 cut(s) | 10, 27 |
| BseMI | GCAATG | 1 cut(s) | 222 |
| BseRI | GAGGAG | 2 cut(s) | 85, 98 |
| BshFI | GGCC | 2 cut(s) | 42, 104 |
| BsiSI | CCGG | 1 cut(s) | 101 |
| BsnI | GGCC | 2 cut(s) | 42, 104 |
| BspANI | GGCC | 2 cut(s) | 42, 104 |
| BspLI | GGNNCC | 1 cut(s) | 141 |
| BspMI | ACCTGC | 1 cut(s) | 73 |
| BspQI | GCTCTTC | 1 cut(s) | 124 |
| BsrDI | GCAATG | 1 cut(s) | 222 |
| BsrFI | RCCGGY | 1 cut(s) | 100 |
| BssAI | RCCGGY | 1 cut(s) | 100 |
| BssECI | CCNNGG | 1 cut(s) | 135 |
| Bst2UI | CCWGG | 1 cut(s) | 136 |
| Bst4CI | ACNGT | 1 cut(s) | 193 |
| Bst6I | CTCTTC | 1 cut(s) | 124 |
| BstF5I | GGATG | 2 cut(s) | 10, 27 |
| BstNI | CCWGG | 1 cut(s) | 136 |
| BstSCI | CCNGG | 1 cut(s) | 134 |
| BsuRI | GGCC | 2 cut(s) | 42, 104 |
| BtsCI | GGATG | 2 cut(s) | 10, 27 |
| BveI | ACCTGC | 1 cut(s) | 73 |
| Cfr10I | RCCGGY | 1 cut(s) | 100 |
| Cfr13I | GGNCC | 2 cut(s) | 40, 103 |
| CviAII | CATG | 2 cut(s) | 125, 154 |
| CviJI | RGCY | 5 cut(s) | 13, 35, 42, 104, 134 |
| CviKI_1 | RGCY | 5 cut(s) | 13, 35, 42, 104, 134 |
| Eam1104I | CTCTTC | 1 cut(s) | 124 |
| EarI | CTCTTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 134 |
| FaeI | CATG | 2 cut(s) | 128, 157 |
| FaiI | YATR | 3 cut(s) | 126, 146, 155 |
| FatI | CATG | 2 cut(s) | 124, 153 |
| FblI | GTMKAC | 1 cut(s) | 87 |
| FokI | GGATG | 2 cut(s) | 17, 34 |
| HaeIII | GGCC | 2 cut(s) | 42, 104 |
| HapII | CCGG | 1 cut(s) | 101 |
| Hin1II | CATG | 2 cut(s) | 128, 157 |
| HinfI | GANTC | 1 cut(s) | 71 |
| HpaII | CCGG | 1 cut(s) | 101 |
| HphI | GGTGA | 3 cut(s) | 51, 90, 182 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 181 |
| Hpy188I | TCNGA | 2 cut(s) | 18, 79 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 181 |
| HpyCH4III | ACNGT | 1 cut(s) | 193 |
| HpyCH4V | TGCA | 1 cut(s) | 215 |
| Hsp92II | CATG | 2 cut(s) | 128, 157 |
| LguI | GCTCTTC | 1 cut(s) | 124 |
| LpnPI | CCDG | 4 cut(s) | 68, 114, 121, 148 |
| LweI | GCATC | 1 cut(s) | 12 |
| MboII | GAAGA | 1 cut(s) | 141 |
| MspI | CCGG | 1 cut(s) | 101 |
| MspR9I | CCNGG | 1 cut(s) | 136 |
| MvaI | CCWGG | 1 cut(s) | 136 |
| NlaIII | CATG | 2 cut(s) | 128, 157 |
| NlaIV | GGNNCC | 1 cut(s) | 141 |
| PciSI | GCTCTTC | 1 cut(s) | 124 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 75, 174 |
| PfeI | GAWTC | 1 cut(s) | 71 |
| Psp6I | CCWGG | 1 cut(s) | 134 |
| PspGI | CCWGG | 1 cut(s) | 134 |
| PspN4I | GGNNCC | 1 cut(s) | 141 |
| PspPI | GGNCC | 2 cut(s) | 40, 103 |
| SapI | GCTCTTC | 1 cut(s) | 124 |
| Sau96I | GGNCC | 2 cut(s) | 40, 103 |
| ScrFI | CCNGG | 1 cut(s) | 136 |
| SetI | ASST | 2 cut(s) | 87, 153 |
| SfaNI | GCATC | 1 cut(s) | 12 |
| SmlI | CTYRAG | 1 cut(s) | 119 |
| SmoI | CTYRAG | 1 cut(s) | 119 |
| StyD4I | CCNGG | 1 cut(s) | 134 |
| TaaI | ACNGT | 1 cut(s) | 193 |
| TaqI | TCGA | 1 cut(s) | 69 |
| TfiI | GAWTC | 1 cut(s) | 71 |
| XmiI | GTMKAC | 1 cut(s) | 87 |