AT1G63390

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000323
Physical Location & Seq
Reverse (-)
23506461 .. 23506967
507 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G63390.1

Sequence Viewer

Length: 507 bp
ATGGCGCCTTCCTTATCACCAATCAGATCACACCACGTGGCAGTTATCGGCGCCGGAGCCGCCGGATTAGTAGCGGCGCGAGAGCTTCGACGGGAAGGTCACTCGGTGGTCGTCTTCGAGAGACAAAAACAAGTCGGAGGAACCTGGATATACACCGATCATATCGAACCCGATCCATTAAGCGTTGACCCGACCCGATCCGTTGTTCATTCGAGCGTTTATGGCTCTCTCCGAACTAATCTCCCCCGTGAGTGTATGGGATACAGGGACTTCCCGTTCGTGGTTCGTTCCGGTGTATCGGAATCTAGAGATCCGAGGAGGTTTCCGAGTCATGGTGAAGTTTTGGCGTATTTACAAGATTTCGCTAAGGAGTTTGCGATCGAGGAGATGATTCGGTTTGATACGGCGGTTGTGAAGGTTGCTCCGGCGGCGGAAGAAGGAAGCGGGAAATGGAGAATTGAATCTACGGAGAAAGAGAAGAAAAAATGGGCACACCGGGCAGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000096 GO:0001101 GO:0003674 GO:0003824 GO:0004383 GO:0004497 GO:0004499 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0006082 GO:0006139 GO:0006163 GO:0006164 GO:0006182 GO:0006520 GO:0006725 GO:0006753 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008144 GO:0008150 GO:0008152 GO:0009058 GO:0009117 GO:0009150 GO:0009152 GO:0009165 GO:0009187 GO:0009190 GO:0009259 GO:0009260 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009725 GO:0009737 GO:0009751 GO:0009753 GO:0009975 GO:0009987 GO:0010033 GO:0010118 GO:0014070 GO:0016143 GO:0016144 GO:0016491 GO:0016705 GO:0016709 GO:0016829 GO:0016849 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019748 GO:0019752 GO:0019757 GO:0019758 GO:0019760 GO:0019761 GO:0019825 GO:0033321 GO:0033506 GO:0033993 GO:0034641 GO:0034654 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0046068 GO:0046390 GO:0046483 GO:0046677 GO:0050832 GO:0050896 GO:0051704 GO:0051707 GO:0052652 GO:0055086 GO:0055114 GO:0070026 GO:0071704 GO:0072521 GO:0072522 GO:0080102 GO:0080103 GO:0080104 GO:0080105 GO:0080106 GO:0080107 GO:0090332 GO:0090407 GO:0097305 GO:0098542 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901657 GO:1901659 GO:1901700
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like NAD_binding_8

Protein Analysis

168

Amino Acids

18.77

Weight (kDa)

8.76

Isoelectric Point (pI)

59.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 12 - 162 2.1e-17 Flavin-binding monooxygenase-like
DAO PF01266 12 - 48 8.7e-09 FAD dependent oxidoreductase
Pyr_redox_2 PF07992 12 - 51 2.8e-07 Pyridine nucleotide-disulphide oxidoreductase
HI0933_like PF03486 12 - 46 5.8e-07 HI0933-like protein Rossmann domain
FAD_binding_2 PF00890 13 - 48 1.2e-07 FAD binding domain
FAD_oxidored PF12831 13 - 49 8.3e-07 FAD dependent oxidoreductase
NAD_binding_8 PF13450 15 - 50 3e-11 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 21 - 136 4.2e-07 Flavin containing amine oxidoreductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 96
AccB1I GGYRCC 2 cut(s) 4, 50
AccII CGCG 1 cut(s) 79
AciI CCGC 6 cut(s) 60, 74, 407, 428, 431, 444
AclWI GGATC 3 cut(s) 167, 192, 305
AcvI CACGTG 1 cut(s) 37
AcyI GRCGYC 2 cut(s) 5, 51
AdeI CACNNNGTG 2 cut(s) 37, 106
AfiI CCNNNNNNNGG 2 cut(s) 280, 332
AgsI TTSAA 1 cut(s) 461
AjnI CCWGG 1 cut(s) 143
AloI GAACNNNNNNTCC 2 cut(s) 260, 292
AluBI AGCT 1 cut(s) 85
AluI AGCT 1 cut(s) 85
Alw26I GTCTC 1 cut(s) 115
AlwI GGATC 3 cut(s) 167, 192, 305
ArsI GACNNNNNNTTYG 2 cut(s) 260, 292
AspLEI GCGC 3 cut(s) 7, 53, 79
AsuC2I CCSGG 1 cut(s) 497
AsuHPI GGTGA 2 cut(s) 9, 347
BaeGI GKGCMC 1 cut(s) 493
BaeI ACNNNNGTAYC 2 cut(s) 393, 426
BanI GGYRCC 2 cut(s) 4, 50
BbrPI CACGTG 1 cut(s) 37
BbsI GAAGAC 1 cut(s) 106
BceAI ACGGC 1 cut(s) 420
BciT130I CCWGG 1 cut(s) 145
BciVI GTATCC 1 cut(s) 254
BcnI CCSGG 1 cut(s) 497
BcoDI GTCTC 1 cut(s) 115
BfaI CTAG 1 cut(s) 306
BfoI RGCGCY 2 cut(s) 8, 54
BfuI GTATCC 1 cut(s) 254
BisI GCNGC 3 cut(s) 60, 75, 429
BlsI GCNGC 3 cut(s) 61, 76, 430
Bme1390I CCNGG 2 cut(s) 145, 497
BmiI GGNNCC 4 cut(s) 6, 52, 58, 142
BmrFI CCNGG 2 cut(s) 145, 497
BpiI GAAGAC 1 cut(s) 106
Bpu10I CCTNAGC 1 cut(s) 366
BpuMI CCSGG 1 cut(s) 497
BsaAI YACGTR 1 cut(s) 37
BsaHI GRCGYC 2 cut(s) 5, 51
BsaJI CCNNGG 1 cut(s) 314
BsaWI WCCGGW 1 cut(s) 290
Bsc4I CCNNNNNNNGG 2 cut(s) 280, 332
BseBI CCWGG 1 cut(s) 145
BseDI CCNNGG 1 cut(s) 314
BseLI CCNNNNNNNGG 2 cut(s) 280, 332
BseRI GAGGAG 2 cut(s) 331, 398
BseSI GKGCMC 1 cut(s) 493
Bsh1236I CGCG 1 cut(s) 79
Bsh1285I CGRYCG 1 cut(s) 381
BshNI GGYRCC 2 cut(s) 4, 50
BsiEI CGRYCG 1 cut(s) 381
BsiSI CCGG 5 cut(s) 54, 63, 291, 425, 496
BslFI GGGAC 1 cut(s) 281
BslI CCNNNNNNNGG 2 cut(s) 280, 332
BsmAI GTCTC 1 cut(s) 115
BsmFI GGGAC 1 cut(s) 281
Bsp1286I GDGCHC 1 cut(s) 493
Bsp143I GATC 6 cut(s) 26, 157, 172, 197, 310, 378
BspACI CCGC 6 cut(s) 60, 74, 407, 428, 431, 444
BspFNI CGCG 1 cut(s) 79
BspLI GGNNCC 4 cut(s) 6, 52, 58, 142
BspPI GGATC 3 cut(s) 167, 192, 305
BspT107I GGYRCC 2 cut(s) 4, 50
BssECI CCNNGG 1 cut(s) 314
BssMI GATC 6 cut(s) 26, 157, 172, 197, 310, 378
BssNI GRCGYC 2 cut(s) 5, 51
Bst2UI CCWGG 1 cut(s) 145
BstACI GRCGYC 2 cut(s) 5, 51
BstBAI YACGTR 1 cut(s) 37
BstDEI CTNAG 1 cut(s) 366
BstFNI CGCG 1 cut(s) 79
BstH2I RGCGCY 2 cut(s) 8, 54
BstHHI GCGC 3 cut(s) 7, 53, 79
BstKTI GATC 6 cut(s) 29, 160, 175, 200, 313, 381
BstMAI GTCTC 1 cut(s) 115
BstMBI GATC 6 cut(s) 26, 157, 172, 197, 310, 378
BstMCI CGRYCG 1 cut(s) 381
BstMWI GCNNNNNNNGC 4 cut(s) 59, 222, 428, 497
BstNI CCWGG 1 cut(s) 145
BstSCI CCNGG 2 cut(s) 143, 495
BstSLI GKGCMC 1 cut(s) 493
BstUI CGCG 1 cut(s) 79
BstV2I GAAGAC 1 cut(s) 106
BstX2I RGATCY 1 cut(s) 310
BstYI RGATCY 1 cut(s) 310
BsuI GTATCC 1 cut(s) 254
BtsI GCAGTG 1 cut(s) 507
BtsIMutI CAGTG 1 cut(s) 507
CfoI GCGC 3 cut(s) 7, 53, 79
CviAII CATG 1 cut(s) 332
CviJI RGCY 3 cut(s) 59, 85, 225
CviKI_1 RGCY 3 cut(s) 59, 85, 225
DdeI CTNAG 1 cut(s) 366
DinI GGCGCC 2 cut(s) 6, 52
DpnI GATC 6 cut(s) 28, 159, 174, 199, 312, 380
DpnII GATC 6 cut(s) 26, 157, 172, 197, 310, 378
DraIII CACNNNGTG 2 cut(s) 37, 106
DrdI GACNNNNNNGTC 1 cut(s) 96
DseDI GACNNNNNNGTC 1 cut(s) 96
EciI GGCGGA 1 cut(s) 446
Eco72I CACGTG 1 cut(s) 37
EcoRII CCWGG 1 cut(s) 143
EgeI GGCGCC 2 cut(s) 6, 52
EheI GGCGCC 2 cut(s) 6, 52
FaeI CATG 1 cut(s) 335
FaiI YATR 5 cut(s) 151, 162, 222, 257, 333
FaqI GGGAC 1 cut(s) 281
FatI CATG 1 cut(s) 331
FauI CCCGC 1 cut(s) 437
Fnu4HI GCNGC 3 cut(s) 60, 75, 429
Fsp4HI GCNGC 3 cut(s) 60, 75, 429
FspBI CTAG 1 cut(s) 306
GlaI GCGC 3 cut(s) 6, 52, 78
GluI GCNGC 3 cut(s) 60, 75, 429
HaeII RGCGCY 2 cut(s) 8, 54
HapII CCGG 5 cut(s) 54, 63, 291, 425, 496
HhaI GCGC 3 cut(s) 7, 53, 79
Hin1I GRCGYC 2 cut(s) 5, 51
Hin1II CATG 1 cut(s) 335
Hin6I GCGC 3 cut(s) 5, 51, 77
HinP1I GCGC 3 cut(s) 5, 51, 77
HincII GTYRAC 1 cut(s) 187
HindII GTYRAC 1 cut(s) 187
HinfI GANTC 4 cut(s) 302, 328, 391, 461
HpaII CCGG 5 cut(s) 54, 63, 291, 425, 496
HphI GGTGA 2 cut(s) 9, 347
Hpy166II GTNNAC 1 cut(s) 187
Hpy188I TCNGA 6 cut(s) 26, 137, 233, 301, 315, 327
Hpy188III TCNNGA 2 cut(s) 118, 306
Hpy8I GTNNAC 1 cut(s) 187
Hpy99I CGWCG 1 cut(s) 93
HpyAV CCTTC 4 cut(s) 18, 89, 409, 431
HpyCH4IV ACGT 1 cut(s) 36
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 222, 428, 497
HpyF3I CTNAG 1 cut(s) 366
HpySE526I ACGT 1 cut(s) 36
Hsp92I GRCGYC 2 cut(s) 5, 51
Hsp92II CATG 1 cut(s) 335
HspAI GCGC 3 cut(s) 5, 51, 77
KasI GGCGCC 2 cut(s) 4, 50
Kzo9I GATC 6 cut(s) 26, 157, 172, 197, 310, 378
LmnI GCTCC 2 cut(s) 56, 427
LpnPI CCDG 7 cut(s) 67, 76, 130, 157, 250, 304, 438
MaeI CTAG 1 cut(s) 306
MaeII ACGT 1 cut(s) 36
MaeIII GTNAC 1 cut(s) 98
MalI GATC 6 cut(s) 28, 159, 174, 199, 312, 380
MboI GATC 6 cut(s) 26, 157, 172, 197, 310, 378
MboII GAAGA 3 cut(s) 106, 446, 490
MflI RGATCY 1 cut(s) 310
MhlI GDGCHC 1 cut(s) 493
MluCI AATT 1 cut(s) 456
Mly113I GGCGCC 2 cut(s) 5, 51
MlyI GAGTC 1 cut(s) 337
MmeI TCCRAC 1 cut(s) 115
MnlI CCTC 4 cut(s) 131, 309, 312, 376
MseI TTAA 1 cut(s) 179
MspI CCGG 5 cut(s) 54, 63, 291, 425, 496
MspR9I CCNGG 2 cut(s) 145, 497
MvaI CCWGG 1 cut(s) 145
MvnI CGCG 1 cut(s) 79
MwoI GCNNNNNNNGC 4 cut(s) 59, 222, 428, 497
NarI GGCGCC 2 cut(s) 5, 51
NciI CCSGG 1 cut(s) 497
NdeII GATC 6 cut(s) 26, 157, 172, 197, 310, 378
NlaIII CATG 1 cut(s) 335
NlaIV GGNNCC 4 cut(s) 6, 52, 58, 142
NmuCI GTSAC 1 cut(s) 98
PfeI GAWTC 3 cut(s) 302, 391, 461
PkrI GCNGC 3 cut(s) 61, 76, 430
Ple19I CGATCG 1 cut(s) 381
PleI GAGTC 1 cut(s) 336
PluTI GGCGCC 2 cut(s) 8, 54
PmaCI CACGTG 1 cut(s) 37
PmlI CACGTG 1 cut(s) 37
PpsI GAGTC 1 cut(s) 336
Ppu21I YACGTR 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 143
PspCI CACGTG 1 cut(s) 37
PspGI CCWGG 1 cut(s) 143
PspN4I GGNNCC 4 cut(s) 6, 52, 58, 142
PsuI RGATCY 1 cut(s) 310
PvuI CGATCG 1 cut(s) 381
SaqAI TTAA 1 cut(s) 179
SatI GCNGC 3 cut(s) 60, 75, 429
Sau3AI GATC 6 cut(s) 26, 157, 172, 197, 310, 378
SchI GAGTC 1 cut(s) 337
ScrFI CCNGG 2 cut(s) 145, 497
SduI GDGCHC 1 cut(s) 493
SetI ASST 6 cut(s) 39, 87, 100, 146, 323, 420
SfoI GGCGCC 2 cut(s) 6, 52
Sse9I AATT 1 cut(s) 456
SsiI CCGC 6 cut(s) 60, 74, 407, 428, 431, 444
SspDI GGCGCC 2 cut(s) 4, 50
SspMI CTAG 1 cut(s) 306
StyD4I CCNGG 2 cut(s) 143, 495
TaiI ACGT 1 cut(s) 39
TaqI TCGA 5 cut(s) 88, 117, 165, 212, 381
TasI AATT 1 cut(s) 456
TauI GCSGC 3 cut(s) 62, 77, 431
TfiI GAWTC 3 cut(s) 302, 391, 461
Tru1I TTAA 1 cut(s) 179
Tru9I TTAA 1 cut(s) 179
TscAI CASTG 1 cut(s) 507
TseFI GTSAC 1 cut(s) 98
Tsp45I GTSAC 1 cut(s) 98
TspDTI ATGAA 1 cut(s) 197
TspGWI ACGGA 2 cut(s) 190, 482
TspRI CASTG 1 cut(s) 507
XbaI TCTAGA 1 cut(s) 305
XspI CTAG 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.