RLG00000003600

flavin-containing monooxygenase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
50562089 .. 50565351
3263 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003600

Sequence Viewer

Length: 1134 bp
ATGGAGTCCGACCCAATTGGTCTCCACCCAAACAAAAACATAGTCCACTCGAGCATGTACCAGTCTCTTAGGACCAACCTCCCGAGAGAGATCATGGGCTTCCAAGACTACCCATTTGCGGCCAAGGAACAAGATAAACATGGAGACCCGAGAAGGTTTCCGGGTCATAGAGAAGTGTTGAAGTACTTGAATGGTTTTGCTAAGGACTTTGGGATTTGTGAGATTGTGAGGTTTGAGAGTGAGGTGGTGTTTGTGGGTTTGGTAGAGGGTGGAAAATGGAAGGTGAAGTCCAAGAGGAAGAGAGGTGAGGATTTGGAAGAGGTTTATGATGCTGTGGTTGTCTGTAATGGTCATTTTACTGAGCCTCGTGTGGCCCAGATTCCAGGCATCAGCTCATGGAAAGGAAAGCAAGTTCACAGCCACAATTATCGAACTCCTGAGCCATTTCGAGATCAGGTTGTAATTTTGATAGGCAGCTCAGCCAGTGCTATTGATATTTCTTGGGACATAGCTGGAGTTGCCAAAGAAGTCCACATTGCATCTAGATCTATCAAAAGTGTCCACGAAGATGGTAGTGTGGTTTTCCCAGATGGGAGTGTTGTACTTGCTGACATCATTCTTCATTGCACAGGGTACAAATATCATTTTCCTTTTCTTGAAACCAATGGCATTGTAACTGTGGATGACAACCGTGTTGGGCGACTGTATAAACACATCTTTCAGCATTGGCTCCCTCACTTTCCTTTGTTGGGATACCTTTTAAGGTGTTCTGTTGTTCCTTTTGCCATGTACGAATTTCAAAGTAAGTGGATAGCAGGTATTTTGTCGAATCAAATTGCACTTCCATCTGAAGAGGAGATGATGGAGGATGTCCAAATTTTCTACTCGTTGCAGGAAGCTTCTGGTATACCTAAACGATTCACCCATATGATAGATGATTACCAGCTCAGTCTGGGTGTCCAGTCTCTGAGGAATGGGGGAGAGCAAATGTGGTTGGCAACTTTTAAGAATACTCGTCTCCGAGGACCGTTGTACCGGGAAGAGTGGGATGATCACCATTTAATATTGCAAGCTGACGAGGACTTCAGGAAATACACCTTCAATGGAGTTAGTATGATAAGAAATGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

378

Amino Acids

43.24

Weight (kDa)

6.38

Isoelectric Point (pI)

43.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 16 - 183 5.1e-28 Flavin-binding monooxygenase-like
Pyr_redox_3 PF13738 25 - 184 7.8e-12 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 183 - 292 7.4e-13 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 806
AccI GTMKAC 1 cut(s) 907
AciI CCGC 1 cut(s) 119
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 794, 876
AcuI CTGAAG 2 cut(s) 870, 1069
AfaI GTAC 6 cut(s) 59, 185, 603, 635, 791, 1034
AfiI CCNNNNNNNGG 2 cut(s) 118, 749
AgsI TTSAA 5 cut(s) 181, 190, 659, 800, 1102
AjnI CCWGG 1 cut(s) 382
AloI GAACNNNNNNTCC 2 cut(s) 396, 428
AluBI AGCT 6 cut(s) 393, 477, 512, 899, 946, 1073
AluI AGCT 6 cut(s) 393, 477, 512, 899, 946, 1073
Alw26I GTCTC 5 cut(s) 26, 69, 138, 969, 1022
AlwNI CAGNNNCTG 1 cut(s) 967
Ama87I CYCGRG 3 cut(s) 49, 82, 148
AoxI GGCC 2 cut(s) 120, 372
ApeKI GCWGC 1 cut(s) 474
ApoI RAATTY 2 cut(s) 794, 876
ArsI GACNNNNNNTTYG 4 cut(s) 27, 59, 98, 130
AspS9I GGNCC 3 cut(s) 72, 373, 1025
AsuC2I CCSGG 2 cut(s) 162, 1037
AsuHPI GGTGA 4 cut(s) 295, 317, 913, 1046
AvaI CYCGRG 3 cut(s) 49, 82, 148
AvaII GGWCC 2 cut(s) 72, 1025
BaeI ACNNNNGTAYC 2 cut(s) 1016, 1049
BauI CACGAG 1 cut(s) 366
BbvI GCAGC 1 cut(s) 486
BccI CCATC 4 cut(s) 563, 584, 853, 856
BciT130I CCWGG 1 cut(s) 384
BciVI GTATCC 1 cut(s) 746
BclI TGATCA 1 cut(s) 1051
BcnI CCSGG 2 cut(s) 162, 1037
BcoDI GTCTC 5 cut(s) 26, 69, 138, 969, 1022
BfaI CTAG 1 cut(s) 543
BfuAI ACCTGC 1 cut(s) 806
BfuI GTATCC 1 cut(s) 746
BglII AGATCT 1 cut(s) 545
BisI GCNGC 2 cut(s) 120, 475
BlpI GCTNAGC 1 cut(s) 478
BlsI GCNGC 2 cut(s) 121, 476
BmcAI AGTACT 1 cut(s) 185
Bme1390I CCNGG 3 cut(s) 162, 384, 1037
Bme18I GGWCC 2 cut(s) 72, 1025
BmeT110I CYCGRG 3 cut(s) 49, 82, 148
BmgT120I GGNCC 3 cut(s) 72, 373, 1025
BmiI GGNNCC 1 cut(s) 731
BmrFI CCNGG 3 cut(s) 162, 384, 1037
BmsI GCATC 3 cut(s) 319, 396, 548
BpmI CTGGAG 1 cut(s) 534
Bpu10I CCTNAGC 2 cut(s) 201, 438
Bpu1102I GCTNAGC 1 cut(s) 478
BpuMI CCSGG 2 cut(s) 162, 1037
BsaI GGTCTC 2 cut(s) 26, 138
BsaJI CCNNGG 2 cut(s) 123, 1021
Bsc4I CCNNNNNNNGG 2 cut(s) 118, 749
Bse1I ACTGG 3 cut(s) 61, 483, 961
Bse3DI GCAATG 2 cut(s) 534, 622
BseBI CCWGG 1 cut(s) 384
BseDI CCNNGG 2 cut(s) 123, 1021
BseGI GGATG 3 cut(s) 688, 874, 1054
BseLI CCNNNNNNNGG 2 cut(s) 118, 749
BseMI GCAATG 2 cut(s) 534, 622
BseMII CTCAG 5 cut(s) 351, 429, 492, 959, 961
BseNI ACTGG 3 cut(s) 61, 483, 961
BseRI GAGGAG 1 cut(s) 869
BseXI GCAGC 1 cut(s) 486
BshFI GGCC 2 cut(s) 122, 374
BsiHKCI CYCGRG 3 cut(s) 49, 82, 148
BsiSI CCGG 2 cut(s) 161, 1036
BslFI GGGAC 1 cut(s) 518
BslI CCNNNNNNNGG 2 cut(s) 118, 749
BsmAI GTCTC 5 cut(s) 26, 69, 138, 969, 1022
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 1 cut(s) 518
BsnI GGCC 2 cut(s) 122, 374
Bso31I GGTCTC 2 cut(s) 26, 138
BsoBI CYCGRG 3 cut(s) 49, 82, 148
Bsp143I GATC 4 cut(s) 90, 451, 545, 1051
Bsp1720I GCTNAGC 1 cut(s) 478
BspACI CCGC 1 cut(s) 119
BspANI GGCC 2 cut(s) 122, 374
BspCNI CTCAG 5 cut(s) 352, 430, 491, 960, 960
BspLI GGNNCC 1 cut(s) 731
BspMI ACCTGC 1 cut(s) 806
BspTNI GGTCTC 2 cut(s) 26, 138
BsrDI GCAATG 2 cut(s) 534, 622
BsrI ACTGG 3 cut(s) 61, 483, 961
BssECI CCNNGG 2 cut(s) 123, 1021
BssMI GATC 4 cut(s) 90, 451, 545, 1051
BssNAI GTATAC 1 cut(s) 908
BssSI CACGAG 1 cut(s) 366
BssT1I CCWWGG 1 cut(s) 123
Bst1107I GTATAC 1 cut(s) 908
Bst2BI CACGAG 1 cut(s) 366
Bst2UI CCWGG 1 cut(s) 384
Bst4CI ACNGT 4 cut(s) 679, 692, 705, 1029
Bst6I CTCTTC 4 cut(s) 293, 312, 846, 1035
BstC8I GCNNGC 1 cut(s) 1071
BstDEI CTNAG 7 cut(s) 68, 201, 360, 438, 478, 947, 968
BstF5I GGATG 3 cut(s) 688, 874, 1054
BstKTI GATC 4 cut(s) 93, 454, 548, 1054
BstMAI GTCTC 5 cut(s) 26, 69, 138, 969, 1022
BstMBI GATC 4 cut(s) 90, 451, 545, 1051
BstMWI GCNNNNNNNGC 1 cut(s) 518
BstNI CCWGG 1 cut(s) 384
BstNSI RCATGY 1 cut(s) 58
BstSCI CCNGG 3 cut(s) 160, 382, 1035
BstV1I GCAGC 1 cut(s) 486
BstX2I RGATCY 1 cut(s) 545
BstXI CCANNNNNNTGG 1 cut(s) 569
BstYI RGATCY 1 cut(s) 545
BstZ17I GTATAC 1 cut(s) 908
BsuI GTATCC 1 cut(s) 746
BsuRI GGCC 2 cut(s) 122, 374
BtsCI GGATG 3 cut(s) 688, 874, 1054
BtsIMutI CAGTG 1 cut(s) 490
BveI ACCTGC 1 cut(s) 806
Cac8I GCNNGC 1 cut(s) 1071
CaiI CAGNNNCTG 1 cut(s) 967
Cfr13I GGNCC 3 cut(s) 72, 373, 1025
Csp6I GTAC 6 cut(s) 58, 184, 602, 634, 790, 1033
CspCI CAANNNNNGTGG 2 cut(s) 788, 823
CviAII CATG 5 cut(s) 55, 94, 140, 396, 787
CviQI GTAC 6 cut(s) 58, 184, 602, 634, 790, 1033
DdeI CTNAG 7 cut(s) 68, 201, 360, 438, 478, 947, 968
DpnI GATC 4 cut(s) 92, 453, 547, 1053
DpnII GATC 4 cut(s) 90, 451, 545, 1051
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 4 cut(s) 293, 312, 846, 1035
EarI CTCTTC 4 cut(s) 293, 312, 846, 1035
Eco130I CCWWGG 1 cut(s) 123
Eco31I GGTCTC 2 cut(s) 26, 138
Eco47I GGWCC 2 cut(s) 72, 1025
Eco57I CTGAAG 2 cut(s) 870, 1069
Eco88I CYCGRG 3 cut(s) 49, 82, 148
EcoRII CCWGG 1 cut(s) 382
EcoT14I CCWWGG 1 cut(s) 123
ErhI CCWWGG 1 cut(s) 123
Esp3I CGTCTC 1 cut(s) 1022
FaeI CATG 5 cut(s) 58, 97, 143, 399, 790
FaqI GGGAC 1 cut(s) 518
FatI CATG 5 cut(s) 54, 93, 139, 395, 786
FauNDI CATATG 1 cut(s) 927
FbaI TGATCA 1 cut(s) 1051
FblI GTMKAC 1 cut(s) 907
Fnu4HI GCNGC 2 cut(s) 120, 475
FokI GGATG 3 cut(s) 695, 881, 1061
Fsp4HI GCNGC 2 cut(s) 120, 475
FspBI CTAG 1 cut(s) 543
GluI GCNGC 2 cut(s) 120, 475
GsuI CTGGAG 1 cut(s) 534
HaeIII GGCC 2 cut(s) 122, 374
HapII CCGG 2 cut(s) 161, 1036
Hin1II CATG 5 cut(s) 58, 97, 143, 399, 790
HindIII AAGCTT 1 cut(s) 897
HinfI GANTC 4 cut(s) 5, 379, 829, 918
HpaII CCGG 2 cut(s) 161, 1036
HphI GGTGA 4 cut(s) 295, 317, 913, 1046
Hpy166II GTNNAC 5 cut(s) 46, 415, 532, 562, 908
Hpy188I TCNGA 4 cut(s) 10, 850, 969, 1022
Hpy188III TCNNGA 6 cut(s) 82, 437, 449, 543, 656, 1087
Hpy8I GTNNAC 5 cut(s) 46, 415, 532, 562, 908
HpyAV CCTTC 3 cut(s) 147, 274, 1108
HpyCH4III ACNGT 4 cut(s) 679, 692, 705, 1029
HpyCH4V TGCA 5 cut(s) 539, 627, 839, 892, 1069
HpyF10VI GCNNNNNNNGC 1 cut(s) 518
HpyF3I CTNAG 7 cut(s) 68, 201, 360, 438, 478, 947, 968
Hsp92II CATG 5 cut(s) 58, 97, 143, 399, 790
Ksp22I TGATCA 1 cut(s) 1051
Kzo9I GATC 4 cut(s) 90, 451, 545, 1051
LmnI GCTCC 1 cut(s) 735
Lsp1109I GCAGC 1 cut(s) 486
LweI GCATC 3 cut(s) 319, 396, 548
MaeI CTAG 1 cut(s) 543
MaeIII GTNAC 1 cut(s) 673
MalI GATC 4 cut(s) 92, 453, 547, 1053
MboI GATC 4 cut(s) 90, 451, 545, 1051
MboII GAAGA 6 cut(s) 310, 329, 578, 611, 863, 1052
MfeI CAATTG 1 cut(s) 15
MflI RGATCY 1 cut(s) 545
MluCI AATT 6 cut(s) 15, 424, 462, 794, 834, 876
MlyI GAGTC 1 cut(s) 14
MmeI TCCRAC 1 cut(s) 33
MseI TTAA 3 cut(s) 761, 1005, 1061
MslI CAYNNNNRTG 2 cut(s) 567, 926
MspI CCGG 2 cut(s) 161, 1036
MspR9I CCNGG 3 cut(s) 162, 384, 1037
MunI CAATTG 1 cut(s) 15
MvaI CCWGG 1 cut(s) 384
MwoI GCNNNNNNNGC 1 cut(s) 518
NciI CCSGG 2 cut(s) 162, 1037
NdeI CATATG 1 cut(s) 927
NdeII GATC 4 cut(s) 90, 451, 545, 1051
NlaIII CATG 5 cut(s) 58, 97, 143, 399, 790
NlaIV GGNNCC 1 cut(s) 731
NspI RCATGY 1 cut(s) 58
PaeR7I CTCGAG 1 cut(s) 49
PfeI GAWTC 3 cut(s) 379, 829, 918
PkrI GCNGC 2 cut(s) 121, 476
PleI GAGTC 1 cut(s) 13
PpsI GAGTC 1 cut(s) 13
Psp6I CCWGG 1 cut(s) 382
PspGI CCWGG 1 cut(s) 382
PspN4I GGNNCC 1 cut(s) 731
PspPI GGNCC 3 cut(s) 72, 373, 1025
PspXI VCTCGAGB 1 cut(s) 49
PstNI CAGNNNCTG 1 cut(s) 967
PsuI RGATCY 1 cut(s) 545
RsaI GTAC 6 cut(s) 59, 185, 603, 635, 791, 1034
RsaNI GTAC 6 cut(s) 58, 184, 602, 634, 790, 1033
RseI CAYNNNNRTG 2 cut(s) 567, 926
SaqAI TTAA 3 cut(s) 761, 1005, 1061
SatI GCNGC 2 cut(s) 120, 475
Sau3AI GATC 4 cut(s) 90, 451, 545, 1051
Sau96I GGNCC 3 cut(s) 72, 373, 1025
ScaI AGTACT 1 cut(s) 185
SchI GAGTC 1 cut(s) 14
ScrFI CCNGG 3 cut(s) 162, 384, 1037
SfaNI GCATC 3 cut(s) 319, 396, 548
Sfr274I CTCGAG 1 cut(s) 49
SinI GGWCC 2 cut(s) 72, 1025
SlaI CTCGAG 1 cut(s) 49
SmiMI CAYNNNNRTG 2 cut(s) 567, 926
SmlI CTYRAG 1 cut(s) 49
SmoI CTYRAG 1 cut(s) 49
Sse9I AATT 6 cut(s) 15, 424, 462, 794, 834, 876
SsiI CCGC 1 cut(s) 119
SspI AATATT 1 cut(s) 1065
SspMI CTAG 1 cut(s) 543
StyD4I CCNGG 3 cut(s) 160, 382, 1035
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 4 cut(s) 679, 692, 705, 1029
TaqI TCGA 4 cut(s) 50, 430, 448, 827
TasI AATT 6 cut(s) 15, 424, 462, 794, 834, 876
TatI WGTACW 2 cut(s) 183, 601
TauI GCSGC 1 cut(s) 122
TfiI GAWTC 3 cut(s) 379, 829, 918
Tru1I TTAA 3 cut(s) 761, 1005, 1061
Tru9I TTAA 3 cut(s) 761, 1005, 1061
TscAI CASTG 1 cut(s) 490
TseI GCWGC 1 cut(s) 474
TspDTI ATGAA 1 cut(s) 611
TspRI CASTG 1 cut(s) 490
VpaK11BI GGWCC 2 cut(s) 72, 1025
XapI RAATTY 2 cut(s) 794, 876
XbaI TCTAGA 1 cut(s) 542
XceI RCATGY 1 cut(s) 58
XhoI CTCGAG 1 cut(s) 49
XmiI GTMKAC 1 cut(s) 907
XspI CTAG 1 cut(s) 543
ZrmI AGTACT 1 cut(s) 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.