Rroxscaffold_3G00254570

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000323
Physical Location & Seq
Forward (+)
48820305 .. 48823548
3244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254570.1

Sequence Viewer

Length: 1470 bp
ATGGTCATAAAAAAAAGGCATATTTTGCCCGGTCAACTCTTTGGCAAGTATGGTTGTCAGTTGACCAAAATAAAATGGCAAGTGTCTGCTATCTCTGCTCATCCGACAATGCAACCCCCATCCCGCCACGTAGCAGTGATCGGCGCCGGCGCCGCAGGCCTGGTCGCAGCACGTGAGCTCCGGCGGGAAGGTCACACTGTCGTCGTCTTCGAGCGAGGAGACCAAATCGGTGGCACGTGGGTGTACACTCCAGAAGTGGAGTCCGACCCAATTGGTCTCCACCCAAACAGAACTGTAGTCCACTCGAGCATGTACCAGTCTCTCAGGACCAACCTCCCGAGAGAGATCATGGGCTTCCGGGATTACCCATTTGCGGCCAAGGAACAAGATGAAGATGGAGACCCGAGAAGGTTTCCGGATCATAGAGAAGTGTTGAAGTACTTGAATGGTTTTGCTAAGGACTTTGGGATTTGTGAGATTGTGAGGTTTGAGAGTGAGGTGGTGTTTGTGGGTTTGGTGGAGGGTGGAAAATGGAAGGTGAAGTTCAAGAGGAAGAGAGGTGAGGATTTGGAGGAGGTTTATGATGCTGTGGTTGTCTGTAATGGTCATTTTACTGAGCCTCGTGTGGCCCAGATTCCAGGCATCAGCTCATGGAAAGGAAAGCAAGTTCACAGCCACAATTATCGGACTCCTGAGCCATTTCGAGATCAGATTGTAATTTTGATAGGCAGCTCAGCTAGTGCTATTGATATTTCTCGGGACATAGCTGGAGTTGCCAAAGAAGTCCACATTGCATCTAGATCTGTTGCCACTGAAACCATGGAAAAGAAGCCTGGCTATGATAACATGTGGCTTCATTCTATGATCAAAAGTGTCCGTGAAGATGGTAGTGTGGTTTTCCCAGATGGGAGTGTTGTACTTGCTGACATCATTCTTCATTGCACAGGGTACAAATATCATTTCCCTTTTCTTCAAACCAATGGCATTGTAACTGTGGATGACAACCGTGTTGGGCCACTGTATAAACATATCTTTCCTCCAGCATTGGCTCCCTCACTTTCCTTTGTTGGGATACCTTTTAAGGTTGTTCCTTTTGCCATGTATGAATTTCAAAGTAAGTGGATAGCAGGTATTTTGTCGAATCGAATTGCACTTCCATCTGAAGAGGAGATGATGGAGGATGTCCAAATTTTCTACTCGTTGCAGGAAGCTTCTGGTATTCCTAAACGATTCACCCATATGATAGATGATTACCAGTTTGAATATGATAACTGGCTTGCAGCTCAGTCTGGGTGTCCAGTCTCTGAGGAATGGAGAGAGCAAATGTGGTTGGCAACTTTTAAGAATGCTCGCCTCCGAGGACCGTTGTACCGGGAAGAGTGGGATGATCACCATTTAATATTGCAAGCTGACGAGGACTTCAGGAAATACACCTTCAATGGAGTCAGTATGATAAGTGATGTCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

489

Amino Acids

55.59

Weight (kDa)

6.33

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 42 - 268 8.9e-37 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 43 - 329 2.8e-15 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 43 - 79 1.1e-07 FAD dependent oxidoreductase
HI0933_like PF03486 43 - 77 9.3e-06 HI0933-like protein Rossmann domain
FAD_binding_2 PF00890 44 - 81 3.7e-07 FAD binding domain
FAD_oxidored PF12831 44 - 112 1.8e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 46 - 80 1.2e-10 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 52 - 188 6.9e-08 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 110 - 294 5.6e-12 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 285 - 396 8e-15 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1118
AccB1I GGYRCC 2 cut(s) 143, 149
AccIII TCCGGA 1 cut(s) 415
AciI CCGC 4 cut(s) 124, 153, 184, 374
AclWI GGATC 1 cut(s) 426
AcoI YGGCCR 1 cut(s) 375
AcsI RAATTY 2 cut(s) 1106, 1188
AcuI CTGAAG 2 cut(s) 1182, 1405
AcvI CACGTG 2 cut(s) 173, 237
AcyI GRCGYC 2 cut(s) 144, 150
AfaI GTAC 6 cut(s) 245, 314, 440, 918, 950, 1370
AfiI CCNNNNNNNGG 2 cut(s) 373, 1068
AflIII ACRYGT 1 cut(s) 846
AgsI TTSAA 7 cut(s) 436, 445, 547, 974, 1112, 1262, 1438
AjnI CCWGG 3 cut(s) 159, 637, 832
AleI CACNNNNGTG 1 cut(s) 239
AloI GAACNNNNNNTCC 2 cut(s) 651, 683
AluBI AGCT 8 cut(s) 178, 648, 732, 737, 767, 1211, 1283, 1409
AluI AGCT 8 cut(s) 178, 648, 732, 737, 767, 1211, 1283, 1409
Alw21I GWGCWC 1 cut(s) 180
Alw26I GTCTC 5 cut(s) 213, 281, 324, 393, 1306
AlwI GGATC 1 cut(s) 426
AlwNI CAGNNNCTG 1 cut(s) 1304
Ama87I CYCGRG 4 cut(s) 304, 337, 403, 756
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 4 cut(s) 157, 375, 627, 1013
ApeKI GCWGC 3 cut(s) 167, 729, 1280
ApoI RAATTY 2 cut(s) 1106, 1188
AspLEI GCGC 2 cut(s) 146, 152
AspS9I GGNCC 4 cut(s) 327, 628, 1013, 1361
AsuC2I CCSGG 3 cut(s) 30, 359, 1373
AsuHPI GGTGA 4 cut(s) 550, 572, 1225, 1382
AvaI CYCGRG 4 cut(s) 304, 337, 403, 756
AvaII GGWCC 2 cut(s) 327, 1361
BaeI ACNNNNGTAYC 2 cut(s) 1352, 1385
BanI GGYRCC 2 cut(s) 143, 149
BanII GRGCYC 1 cut(s) 180
BauI CACGAG 1 cut(s) 621
BbrPI CACGTG 2 cut(s) 173, 237
BbsI GAAGAC 1 cut(s) 199
Bbv12I GWGCWC 1 cut(s) 180
BbvI GCAGC 3 cut(s) 179, 741, 1292
BccI CCATC 6 cut(s) 127, 389, 878, 899, 1165, 1168
BciT130I CCWGG 3 cut(s) 161, 639, 834
BciVI GTATCC 1 cut(s) 1065
BclI TGATCA 2 cut(s) 864, 1387
BcnI CCSGG 3 cut(s) 30, 359, 1373
BcoDI GTCTC 5 cut(s) 213, 281, 324, 393, 1306
BfaI CTAG 2 cut(s) 738, 798
BfmI CTRYAG 1 cut(s) 294
BfoI RGCGCY 2 cut(s) 147, 153
BfuAI ACCTGC 1 cut(s) 1118
BfuI GTATCC 1 cut(s) 1065
BglII AGATCT 1 cut(s) 800
BisI GCNGC 5 cut(s) 153, 168, 375, 730, 1281
BlpI GCTNAGC 1 cut(s) 733
BlsI GCNGC 5 cut(s) 154, 169, 376, 731, 1282
BmcAI AGTACT 1 cut(s) 440
Bme1390I CCNGG 6 cut(s) 30, 161, 359, 639, 834, 1373
Bme18I GGWCC 2 cut(s) 327, 1361
BmeT110I CYCGRG 4 cut(s) 304, 337, 403, 756
BmgT120I GGNCC 4 cut(s) 327, 628, 1013, 1361
BmiI GGNNCC 3 cut(s) 145, 151, 1050
BmrFI CCNGG 6 cut(s) 30, 161, 359, 639, 834, 1373
BmsI GCATC 3 cut(s) 574, 651, 803
BpiI GAAGAC 1 cut(s) 199
BpmI CTGGAG 3 cut(s) 234, 789, 1023
Bpu10I CCTNAGC 2 cut(s) 456, 693
Bpu1102I GCTNAGC 1 cut(s) 733
BpuMI CCSGG 3 cut(s) 30, 359, 1373
BsaAI YACGTR 3 cut(s) 130, 173, 237
BsaHI GRCGYC 2 cut(s) 144, 150
BsaI GGTCTC 3 cut(s) 213, 281, 393
BsaJI CCNNGG 3 cut(s) 378, 819, 1357
BsaWI WCCGGW 1 cut(s) 415
BsaXI ACNNNNNCTCC 2 cut(s) 162, 192
Bsc4I CCNNNNNNNGG 2 cut(s) 373, 1068
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 4 cut(s) 316, 1255, 1277, 1298
Bse3DI GCAATG 2 cut(s) 789, 937
BseAI TCCGGA 1 cut(s) 415
BseBI CCWGG 3 cut(s) 161, 639, 834
BseDI CCNNGG 3 cut(s) 378, 819, 1357
BseGI GGATG 5 cut(s) 100, 119, 1003, 1186, 1390
BseLI CCNNNNNNNGG 2 cut(s) 373, 1068
BseMI GCAATG 2 cut(s) 789, 937
BseMII CTCAG 6 cut(s) 337, 606, 684, 747, 1296, 1298
BseNI ACTGG 4 cut(s) 316, 1255, 1277, 1298
BseRI GAGGAG 3 cut(s) 231, 587, 1181
BseXI GCAGC 3 cut(s) 179, 741, 1292
BshFI GGCC 4 cut(s) 159, 377, 629, 1015
BshNI GGYRCC 2 cut(s) 143, 149
BsiHKAI GWGCWC 1 cut(s) 180
BsiHKCI CYCGRG 4 cut(s) 304, 337, 403, 756
BsiSI CCGG 6 cut(s) 30, 147, 181, 358, 416, 1372
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 2 cut(s) 373, 1068
BsmAI GTCTC 5 cut(s) 213, 281, 324, 393, 1306
BsmFI GGGAC 1 cut(s) 773
BsmI GAATGC 1 cut(s) 1351
BsnI GGCC 4 cut(s) 159, 377, 629, 1015
Bso31I GGTCTC 3 cut(s) 213, 281, 393
BsoBI CYCGRG 4 cut(s) 304, 337, 403, 756
Bsp1286I GDGCHC 1 cut(s) 180
Bsp13I TCCGGA 1 cut(s) 415
Bsp1407I TGTACA 1 cut(s) 243
Bsp143I GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
Bsp1720I GCTNAGC 1 cut(s) 733
Bsp19I CCATGG 1 cut(s) 819
BspACI CCGC 4 cut(s) 124, 153, 184, 374
BspANI GGCC 4 cut(s) 159, 377, 629, 1015
BspCNI CTCAG 6 cut(s) 336, 607, 685, 746, 1297, 1297
BspEI TCCGGA 1 cut(s) 415
BspLI GGNNCC 3 cut(s) 145, 151, 1050
BspMI ACCTGC 1 cut(s) 1118
BspPI GGATC 1 cut(s) 426
BspT107I GGYRCC 2 cut(s) 143, 149
BspTNI GGTCTC 3 cut(s) 213, 281, 393
BsrDI GCAATG 2 cut(s) 789, 937
BsrFI RCCGGY 1 cut(s) 146
BsrGI TGTACA 1 cut(s) 243
BsrI ACTGG 4 cut(s) 316, 1255, 1277, 1298
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 3 cut(s) 378, 819, 1357
BssMI GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
BssNI GRCGYC 2 cut(s) 144, 150
BssSI CACGAG 1 cut(s) 621
BssT1I CCWWGG 2 cut(s) 378, 819
Bst2BI CACGAG 1 cut(s) 621
Bst2UI CCWGG 3 cut(s) 161, 639, 834
Bst4CI ACNGT 6 cut(s) 199, 295, 994, 1007, 1020, 1365
Bst6I CTCTTC 3 cut(s) 548, 1158, 1371
BstACI GRCGYC 2 cut(s) 144, 150
BstAPI GCANNNNNTGC 1 cut(s) 25
BstAUI TGTACA 1 cut(s) 243
BstBAI YACGTR 3 cut(s) 130, 173, 237
BstC8I GCNNGC 5 cut(s) 148, 157, 1278, 1351, 1407
BstDEI CTNAG 7 cut(s) 323, 456, 615, 693, 733, 1284, 1305
BstDSI CCRYGG 1 cut(s) 819
BstF5I GGATG 5 cut(s) 100, 119, 1003, 1186, 1390
BstH2I RGCGCY 2 cut(s) 147, 153
BstHHI GCGC 2 cut(s) 146, 152
BstKTI GATC 7 cut(s) 141, 348, 421, 709, 803, 867, 1390
BstMAI GTCTC 5 cut(s) 213, 281, 324, 393, 1306
BstMBI GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
BstMWI GCNNNNNNNGC 5 cut(s) 25, 95, 152, 156, 773
BstNI CCWGG 3 cut(s) 161, 639, 834
BstNSI RCATGY 2 cut(s) 313, 850
BstSCI CCNGG 6 cut(s) 28, 159, 357, 637, 832, 1371
BstSFI CTRYAG 1 cut(s) 294
BstV1I GCAGC 3 cut(s) 179, 741, 1292
BstV2I GAAGAC 1 cut(s) 199
BstX2I RGATCY 1 cut(s) 800
BstXI CCANNNNNNTGG 1 cut(s) 230
BstYI RGATCY 1 cut(s) 800
BsuI GTATCC 1 cut(s) 1065
BsuRI GGCC 4 cut(s) 159, 377, 629, 1015
BtgI CCRYGG 1 cut(s) 819
BtsCI GGATG 5 cut(s) 100, 119, 1003, 1186, 1390
BtsI GCAGTG 1 cut(s) 141
BtsIMutI CAGTG 4 cut(s) 141, 195, 810, 1016
BveI ACCTGC 1 cut(s) 1118
Cac8I GCNNGC 5 cut(s) 148, 157, 1278, 1351, 1407
CaiI CAGNNNCTG 1 cut(s) 1304
CfoI GCGC 2 cut(s) 146, 152
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 4 cut(s) 327, 628, 1013, 1361
Csp6I GTAC 6 cut(s) 244, 313, 439, 917, 949, 1369
CspCI CAANNNNNGTGG 2 cut(s) 1100, 1135
CviAII CATG 6 cut(s) 310, 349, 651, 820, 847, 1099
CviQI GTAC 6 cut(s) 244, 313, 439, 917, 949, 1369
DdeI CTNAG 7 cut(s) 323, 456, 615, 693, 733, 1284, 1305
DinI GGCGCC 2 cut(s) 145, 151
DpnI GATC 7 cut(s) 140, 347, 420, 708, 802, 866, 1389
DpnII GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
EaeI YGGCCR 1 cut(s) 375
Eam1104I CTCTTC 3 cut(s) 548, 1158, 1371
EarI CTCTTC 3 cut(s) 548, 1158, 1371
Ecl136II GAGCTC 1 cut(s) 178
Eco130I CCWWGG 2 cut(s) 378, 819
Eco147I AGGCCT 1 cut(s) 159
Eco24I GRGCYC 1 cut(s) 180
Eco31I GGTCTC 3 cut(s) 213, 281, 393
Eco47I GGWCC 2 cut(s) 327, 1361
Eco53kI GAGCTC 1 cut(s) 178
Eco57I CTGAAG 2 cut(s) 1182, 1405
Eco72I CACGTG 2 cut(s) 173, 237
Eco88I CYCGRG 4 cut(s) 304, 337, 403, 756
EcoICRI GAGCTC 1 cut(s) 178
EcoRII CCWGG 3 cut(s) 159, 637, 832
EcoT14I CCWWGG 2 cut(s) 378, 819
EcoT38I GRGCYC 1 cut(s) 180
EgeI GGCGCC 2 cut(s) 145, 151
EheI GGCGCC 2 cut(s) 145, 151
ErhI CCWWGG 2 cut(s) 378, 819
FaeI CATG 6 cut(s) 313, 352, 654, 823, 850, 1102
FaqI GGGAC 1 cut(s) 773
FatI CATG 6 cut(s) 309, 348, 650, 819, 846, 1098
FauI CCCGC 2 cut(s) 131, 177
FauNDI CATATG 1 cut(s) 1239
FbaI TGATCA 2 cut(s) 864, 1387
Fnu4HI GCNGC 5 cut(s) 153, 168, 375, 730, 1281
FokI GGATG 5 cut(s) 87, 106, 1010, 1193, 1397
FriOI GRGCYC 1 cut(s) 180
Fsp4HI GCNGC 5 cut(s) 153, 168, 375, 730, 1281
FspBI CTAG 2 cut(s) 738, 798
GlaI GCGC 2 cut(s) 145, 151
GluI GCNGC 5 cut(s) 153, 168, 375, 730, 1281
GsuI CTGGAG 3 cut(s) 234, 789, 1023
HaeII RGCGCY 2 cut(s) 147, 153
HaeIII GGCC 4 cut(s) 159, 377, 629, 1015
HapII CCGG 6 cut(s) 30, 147, 181, 358, 416, 1372
HhaI GCGC 2 cut(s) 146, 152
Hin1I GRCGYC 2 cut(s) 144, 150
Hin1II CATG 6 cut(s) 313, 352, 654, 823, 850, 1102
Hin6I GCGC 2 cut(s) 144, 150
HinP1I GCGC 2 cut(s) 144, 150
HincII GTYRAC 2 cut(s) 35, 63
HindII GTYRAC 2 cut(s) 35, 63
HindIII AAGCTT 1 cut(s) 1209
HinfI GANTC 6 cut(s) 260, 634, 688, 1141, 1230, 1443
HpaII CCGG 6 cut(s) 30, 147, 181, 358, 416, 1372
HphI GGTGA 4 cut(s) 550, 572, 1225, 1382
Hpy166II GTNNAC 7 cut(s) 35, 63, 244, 246, 301, 670, 787
Hpy188I TCNGA 7 cut(s) 105, 265, 687, 711, 1162, 1306, 1358
Hpy8I GTNNAC 7 cut(s) 35, 63, 244, 246, 301, 670, 787
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 4 cut(s) 182, 402, 529, 1444
HpyCH4III ACNGT 6 cut(s) 199, 295, 994, 1007, 1020, 1365
HpyCH4IV ACGT 3 cut(s) 129, 172, 236
HpyCH4V TGCA 7 cut(s) 112, 794, 942, 1151, 1204, 1280, 1405
HpyF10VI GCNNNNNNNGC 5 cut(s) 25, 95, 152, 156, 773
HpyF3I CTNAG 7 cut(s) 323, 456, 615, 693, 733, 1284, 1305
HpySE526I ACGT 3 cut(s) 129, 172, 236
Hsp92I GRCGYC 2 cut(s) 144, 150
Hsp92II CATG 6 cut(s) 313, 352, 654, 823, 850, 1102
HspAI GCGC 2 cut(s) 144, 150
KasI GGCGCC 2 cut(s) 143, 149
Kpn2I TCCGGA 1 cut(s) 415
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Ksp22I TGATCA 2 cut(s) 864, 1387
Kzo9I GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
LmnI GCTCC 2 cut(s) 183, 1054
Lsp1109I GCAGC 3 cut(s) 179, 741, 1292
LweI GCATC 3 cut(s) 574, 651, 803
MaeI CTAG 2 cut(s) 738, 798
MaeII ACGT 3 cut(s) 129, 172, 236
MaeIII GTNAC 2 cut(s) 191, 988
MalI GATC 7 cut(s) 140, 347, 420, 708, 802, 866, 1389
MboI GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
MboII GAAGA 8 cut(s) 199, 404, 565, 893, 926, 962, 1175, 1388
MfeI CAATTG 1 cut(s) 270
MflI RGATCY 1 cut(s) 800
MhlI GDGCHC 1 cut(s) 180
MluCI AATT 6 cut(s) 270, 679, 717, 1106, 1146, 1188
Mly113I GGCGCC 2 cut(s) 144, 150
MlyI GAGTC 3 cut(s) 269, 682, 1452
MmeI TCCRAC 2 cut(s) 128, 288
MreI CGCCGGCG 1 cut(s) 146
MroI TCCGGA 1 cut(s) 415
MroNI GCCGGC 1 cut(s) 146
MseI TTAA 3 cut(s) 1080, 1341, 1397
MslI CAYNNNNRTG 2 cut(s) 239, 1238
MspI CCGG 6 cut(s) 30, 147, 181, 358, 416, 1372
MspR9I CCNGG 6 cut(s) 30, 161, 359, 639, 834, 1373
MunI CAATTG 1 cut(s) 270
Mva1269I GAATGC 1 cut(s) 1351
MvaI CCWGG 3 cut(s) 161, 639, 834
MwoI GCNNNNNNNGC 5 cut(s) 25, 95, 152, 156, 773
NaeI GCCGGC 1 cut(s) 148
NarI GGCGCC 2 cut(s) 144, 150
NciI CCSGG 3 cut(s) 30, 359, 1373
NcoI CCATGG 1 cut(s) 819
NdeI CATATG 1 cut(s) 1239
NdeII GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
NgoMIV GCCGGC 1 cut(s) 146
NlaIII CATG 6 cut(s) 313, 352, 654, 823, 850, 1102
NlaIV GGNNCC 3 cut(s) 145, 151, 1050
NmuCI GTSAC 1 cut(s) 191
NspI RCATGY 2 cut(s) 313, 850
OliI CACNNNNGTG 1 cut(s) 239
PaeR7I CTCGAG 1 cut(s) 304
PceI AGGCCT 1 cut(s) 159
PciI ACATGT 1 cut(s) 846
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PctI GAATGC 1 cut(s) 1351
PdiI GCCGGC 1 cut(s) 148
PfeI GAWTC 3 cut(s) 634, 1141, 1230
PfoI TCCNGGA 1 cut(s) 357
PkrI GCNGC 5 cut(s) 154, 169, 376, 731, 1282
PleI GAGTC 3 cut(s) 268, 682, 1451
PluTI GGCGCC 2 cut(s) 147, 153
PmaCI CACGTG 2 cut(s) 173, 237
PmlI CACGTG 2 cut(s) 173, 237
PpsI GAGTC 3 cut(s) 268, 682, 1451
Ppu21I YACGTR 3 cut(s) 130, 173, 237
PscI ACATGT 1 cut(s) 846
Psp124BI GAGCTC 1 cut(s) 180
Psp6I CCWGG 3 cut(s) 159, 637, 832
PspCI CACGTG 2 cut(s) 173, 237
PspGI CCWGG 3 cut(s) 159, 637, 832
PspN4I GGNNCC 3 cut(s) 145, 151, 1050
PspPI GGNCC 4 cut(s) 327, 628, 1013, 1361
PspXI VCTCGAGB 1 cut(s) 304
PstNI CAGNNNCTG 1 cut(s) 1304
PsuI RGATCY 1 cut(s) 800
RsaI GTAC 6 cut(s) 245, 314, 440, 918, 950, 1370
RsaNI GTAC 6 cut(s) 244, 313, 439, 917, 949, 1369
RseI CAYNNNNRTG 2 cut(s) 239, 1238
SacI GAGCTC 1 cut(s) 180
SaqAI TTAA 3 cut(s) 1080, 1341, 1397
SatI GCNGC 5 cut(s) 153, 168, 375, 730, 1281
Sau3AI GATC 7 cut(s) 138, 345, 418, 706, 800, 864, 1387
Sau96I GGNCC 4 cut(s) 327, 628, 1013, 1361
ScaI AGTACT 1 cut(s) 440
SchI GAGTC 3 cut(s) 269, 682, 1452
ScrFI CCNGG 6 cut(s) 30, 161, 359, 639, 834, 1373
SduI GDGCHC 1 cut(s) 180
SfaNI GCATC 3 cut(s) 574, 651, 803
SfcI CTRYAG 1 cut(s) 294
SfoI GGCGCC 2 cut(s) 145, 151
Sfr274I CTCGAG 1 cut(s) 304
SgrAI CRCCGGYG 1 cut(s) 146
SinI GGWCC 2 cut(s) 327, 1361
SlaI CTCGAG 1 cut(s) 304
SmiMI CAYNNNNRTG 2 cut(s) 239, 1238
SmlI CTYRAG 1 cut(s) 304
SmoI CTYRAG 1 cut(s) 304
Sse9I AATT 6 cut(s) 270, 679, 717, 1106, 1146, 1188
SseBI AGGCCT 1 cut(s) 159
SsiI CCGC 4 cut(s) 124, 153, 184, 374
SspDI GGCGCC 2 cut(s) 143, 149
SspI AATATT 1 cut(s) 1401
SspMI CTAG 2 cut(s) 738, 798
SstI GAGCTC 1 cut(s) 180
StuI AGGCCT 1 cut(s) 159
StyD4I CCNGG 6 cut(s) 28, 159, 357, 637, 832, 1371
StyI CCWWGG 2 cut(s) 378, 819
TaaI ACNGT 6 cut(s) 199, 295, 994, 1007, 1020, 1365
TaiI ACGT 3 cut(s) 132, 175, 239
TaqI TCGA 5 cut(s) 210, 305, 703, 1139, 1144
TasI AATT 6 cut(s) 270, 679, 717, 1106, 1146, 1188
TatI WGTACW 3 cut(s) 243, 438, 916
TauI GCSGC 2 cut(s) 155, 377
TfiI GAWTC 3 cut(s) 634, 1141, 1230
Tru1I TTAA 3 cut(s) 1080, 1341, 1397
Tru9I TTAA 3 cut(s) 1080, 1341, 1397
TscAI CASTG 4 cut(s) 141, 202, 817, 1023
TseFI GTSAC 1 cut(s) 191
TseI GCWGC 3 cut(s) 167, 729, 1280
Tsp45I GTSAC 1 cut(s) 191
TspDTI ATGAA 4 cut(s) 405, 845, 926, 1119
TspGWI ACGGA 1 cut(s) 866
TspRI CASTG 4 cut(s) 141, 202, 817, 1023
VpaK11BI GGWCC 2 cut(s) 327, 1361
XapI RAATTY 2 cut(s) 1106, 1188
XbaI TCTAGA 1 cut(s) 797
XceI RCATGY 2 cut(s) 313, 850
XcmI CCANNNNNNNNNTGG 1 cut(s) 817
XhoI CTCGAG 1 cut(s) 304
XspI CTAG 2 cut(s) 738, 798
ZrmI AGTACT 1 cut(s) 440
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.