Rroxscaffold_3G00254590

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000323
Physical Location & Seq
Forward (+)
48841129 .. 48844071
2943 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254590.1

Sequence Viewer

Length: 1284 bp
ATGCAACTCTTATCTAGGCACGTAGCAGTGATCGGCGCCGGGGCCTCCGGCCTGGTGGCGGCACGTGAGCTCCGGCGGGAAGGTCACACTGTTGTCGTCTTCGAGCGAGGATACCAAATCGGTGGCACGTGGGTGTACACTCCAGAAGTGGAGTCCGACCCAATTGGTCTCCACCCAAACAGAAACATAGTCCACTCGAGCATGTACCAGTCTCTCAGGACCAATCTCCCAAGAGAGGTCATGGGGTTCCGGGACTACCCTTTTGTGGCCAAGGAAGGAGATGAAGAGAGAGACCCGAGAAGGTTTCCGGGTCACAGAGAGGTGTTGAAGTACTTGAATGACTACGCTACCGAGTTTGGGATTTTCGAGGTTGTGAGGTTCGAGTGTGAGGTGGTGTTTGTGGGTTTGGTGGAGGGTGGAAAGTGGAAGGTGAAGTCCAAGAGCAAGAGAGGTGAGGTTTTGGAAGAGGTTTATGATGCTGTGGTGGTCTGTAATGGACATCATACTGAGCCTCGTGTAGCTCAGATTCCAGGCATCAATGCATGGAAGGGGAAGCAGATTCACAGCCACAATTACCGTAATCCTGAGCCATTCAGAGATCAGGTTGTAATTTTGATAGGCAGCGGTAGTAGTGCTGTTGATATGTCTCGGGAGATAGCTGGAGTTGCCAAAGAAGTCCACATTGCATCTAGATCTGTTGCTGATGAAACCATTGAAAAGCACCCTGGCTATGATAACTTGTGGCTTCACTCAATGATCAAAAGTGCCCATGAAGATGGGAGTGTTGTTTTCCAAGATGGGAGTGTTGTCCTTGCAGACATCATTCTCCATTGCACCGGGTACAAGTATCATTTTCCTTTTCTCGAAACGAATGGCATTGTGACTGTGGATGATAACCGTGTTGGGCCACTGTACAAGCATGTCTTTCCACCTGCCTTTGCACCTTCGCTTTCCTTCGTTGGTATACCATGGAAGGCCGCTCTTTTCTTCATGTTTGAACTTCAAAGCAAGTGGATAGCAGGTATTTTGTCTAATCGAATGGCACTTCCATCCCAAGAGTACATGATGGAGGATGTAAAAGCTTTCTACTCTTTACTTGAAGCTTCTGACACACCTAAGCGATACACTCATAACATTGCTGATTATCAGTATGGATATGAAGATTGGGTTGCAACTGAGTGTGGGTGTCGAGTCTCTGAGGAATGGAGAAAGAAAATGTACTTTGCAGCTATAGAGAACATGCTTACCAAACCAGAGACATTCCGGGATGAGTGGGGAATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

427

Amino Acids

48.54

Weight (kDa)

5.96

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 6 - 232 1.6e-38 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 7 - 295 2.3e-16 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 7 - 43 6.7e-07 FAD dependent oxidoreductase
FAD_binding_2 PF00890 8 - 45 2.5e-06 FAD binding domain
FAD_oxidored PF12831 8 - 78 7.4e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 10 - 44 1.3e-09 NAD(P)-binding Rossmann-like domain
Pyr_redox_3 PF13738 74 - 244 3e-13 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 251 - 361 4e-16 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 940
Acc36I ACCTGC 2 cut(s) 940, 1010
AccB1I GGYRCC 1 cut(s) 35
AccBSI CCGCTC 1 cut(s) 980
AccI GTMKAC 1 cut(s) 964
AciI CCGC 4 cut(s) 59, 76, 624, 978
AcoI YGGCCR 1 cut(s) 267
AcvI CACGTG 2 cut(s) 65, 129
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 7 cut(s) 137, 206, 332, 842, 914, 1061, 1220
AfiI CCNNNNNNNGG 4 cut(s) 58, 235, 265, 357
AgsI TTSAA 6 cut(s) 328, 337, 716, 998, 1004, 1100
AjnI CCWGG 3 cut(s) 51, 529, 724
AleI CACNNNNGTG 1 cut(s) 131
AluBI AGCT 6 cut(s) 70, 521, 659, 1082, 1103, 1229
AluI AGCT 6 cut(s) 70, 521, 659, 1082, 1103, 1229
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 6 cut(s) 173, 216, 285, 651, 1198, 1250
Ama87I CYCGRG 3 cut(s) 196, 295, 648
AoxI GGCC 5 cut(s) 42, 49, 267, 905, 975
ApeKI GCWGC 2 cut(s) 621, 1226
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
AspLEI GCGC 1 cut(s) 38
AspS9I GGNCC 3 cut(s) 42, 219, 905
AsuC2I CCSGG 5 cut(s) 40, 251, 309, 838, 1265
AsuHPI GGTGA 2 cut(s) 442, 464
AvaI CYCGRG 3 cut(s) 196, 295, 648
AvaII GGWCC 1 cut(s) 219
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 1 cut(s) 269
BanI GGYRCC 1 cut(s) 35
BanII GRGCYC 1 cut(s) 72
BauI CACGAG 1 cut(s) 513
BbrPI CACGTG 2 cut(s) 65, 129
BbsI GAAGAC 1 cut(s) 91
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 2 cut(s) 633, 1238
BccI CCATC 4 cut(s) 770, 791, 1057, 1060
BciT130I CCWGG 3 cut(s) 53, 531, 726
BciVI GTATCC 1 cut(s) 104
BclI TGATCA 1 cut(s) 756
BcnI CCSGG 5 cut(s) 40, 251, 309, 838, 1265
BcoDI GTCTC 6 cut(s) 173, 216, 285, 651, 1198, 1250
BfaI CTAG 2 cut(s) 15, 690
BfmI CTRYAG 1 cut(s) 1230
BfoI RGCGCY 1 cut(s) 39
BfuAI ACCTGC 2 cut(s) 940, 1010
BfuI GTATCC 1 cut(s) 104
BglII AGATCT 1 cut(s) 692
BisI GCNGC 4 cut(s) 60, 622, 978, 1227
BlsI GCNGC 4 cut(s) 61, 623, 979, 1228
BmcAI AGTACT 1 cut(s) 332
Bme1390I CCNGG 8 cut(s) 40, 53, 251, 309, 531, 726, 838, 1265
Bme18I GGWCC 1 cut(s) 219
BmeT110I CYCGRG 3 cut(s) 196, 295, 648
BmgT120I GGNCC 3 cut(s) 42, 219, 905
BmiI GGNNCC 3 cut(s) 37, 43, 248
BmrFI CCNGG 8 cut(s) 40, 53, 251, 309, 531, 726, 838, 1265
BmsI GCATC 3 cut(s) 466, 543, 695
BpiI GAAGAC 1 cut(s) 91
BpmI CTGGAG 2 cut(s) 126, 681
Bpu10I CCTNAGC 2 cut(s) 585, 1116
BpuMI CCSGG 5 cut(s) 40, 251, 309, 838, 1265
BsaAI YACGTR 3 cut(s) 22, 65, 129
BsaHI GRCGYC 1 cut(s) 36
BsaI GGTCTC 2 cut(s) 173, 285
BsaJI CCNNGG 4 cut(s) 39, 270, 724, 968
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 4 cut(s) 58, 235, 265, 357
Bse1I ACTGG 1 cut(s) 208
Bse3DI GCAATG 3 cut(s) 681, 829, 1134
BseBI CCWGG 3 cut(s) 53, 531, 726
BseDI CCNNGG 4 cut(s) 39, 270, 724, 968
BseGI GGATG 4 cut(s) 895, 1049, 1078, 1273
BseLI CCNNNNNNNGG 4 cut(s) 58, 235, 265, 357
BseMI GCAATG 3 cut(s) 681, 829, 1134
BseMII CTCAG 6 cut(s) 229, 498, 536, 576, 1167, 1188
BseNI ACTGG 1 cut(s) 208
BseSI GKGCMC 1 cut(s) 769
BseXI GCAGC 2 cut(s) 633, 1238
BshFI GGCC 5 cut(s) 44, 51, 269, 907, 977
BshNI GGYRCC 1 cut(s) 35
BsiHKAI GWGCWC 1 cut(s) 72
BsiHKCI CYCGRG 3 cut(s) 196, 295, 648
BsiSI CCGG 7 cut(s) 39, 48, 73, 250, 308, 837, 1264
BslFI GGGAC 1 cut(s) 266
BslI CCNNNNNNNGG 4 cut(s) 58, 235, 265, 357
BsmAI GTCTC 6 cut(s) 173, 216, 285, 651, 1198, 1250
BsmFI GGGAC 1 cut(s) 266
BsnI GGCC 5 cut(s) 44, 51, 269, 907, 977
Bso31I GGTCTC 2 cut(s) 173, 285
BsoBI CYCGRG 3 cut(s) 196, 295, 648
Bsp1286I GDGCHC 2 cut(s) 72, 769
Bsp1407I TGTACA 2 cut(s) 135, 912
Bsp143I GATC 4 cut(s) 30, 598, 692, 756
Bsp19I CCATGG 1 cut(s) 968
BspACI CCGC 4 cut(s) 59, 76, 624, 978
BspANI GGCC 5 cut(s) 44, 51, 269, 907, 977
BspCNI CTCAG 6 cut(s) 228, 499, 535, 577, 1168, 1189
BspLI GGNNCC 3 cut(s) 37, 43, 248
BspMI ACCTGC 2 cut(s) 940, 1010
BspT107I GGYRCC 1 cut(s) 35
BspTNI GGTCTC 2 cut(s) 173, 285
BsrBI CCGCTC 1 cut(s) 980
BsrDI GCAATG 3 cut(s) 681, 829, 1134
BsrGI TGTACA 2 cut(s) 135, 912
BsrI ACTGG 1 cut(s) 208
BssECI CCNNGG 4 cut(s) 39, 270, 724, 968
BssMI GATC 4 cut(s) 30, 598, 692, 756
BssNAI GTATAC 1 cut(s) 965
BssNI GRCGYC 1 cut(s) 36
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 2 cut(s) 270, 968
Bst1107I GTATAC 1 cut(s) 965
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 3 cut(s) 53, 531, 726
Bst4CI ACNGT 5 cut(s) 91, 578, 886, 899, 912
Bst6I CTCTTC 2 cut(s) 279, 459
BstACI GRCGYC 1 cut(s) 36
BstAUI TGTACA 2 cut(s) 135, 912
BstBAI YACGTR 3 cut(s) 22, 65, 129
BstDEI CTNAG 7 cut(s) 215, 507, 522, 585, 1116, 1176, 1197
BstDSI CCRYGG 1 cut(s) 968
BstF5I GGATG 4 cut(s) 895, 1049, 1078, 1273
BstH2I RGCGCY 1 cut(s) 39
BstHHI GCGC 1 cut(s) 38
BstKTI GATC 4 cut(s) 33, 601, 695, 759
BstMAI GTCTC 6 cut(s) 173, 216, 285, 651, 1198, 1250
BstMBI GATC 4 cut(s) 30, 598, 692, 756
BstMWI GCNNNNNNNGC 1 cut(s) 665
BstNI CCWGG 3 cut(s) 53, 531, 726
BstNSI RCATGY 3 cut(s) 205, 923, 1243
BstSCI CCNGG 8 cut(s) 38, 51, 249, 307, 529, 724, 836, 1263
BstSFI CTRYAG 1 cut(s) 1230
BstSLI GKGCMC 1 cut(s) 769
BstV1I GCAGC 2 cut(s) 633, 1238
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 692
BstXI CCANNNNNNTGG 2 cut(s) 122, 776
BstYI RGATCY 1 cut(s) 692
BstZ17I GTATAC 1 cut(s) 965
BsuI GTATCC 1 cut(s) 104
BsuRI GGCC 5 cut(s) 44, 51, 269, 907, 977
BtgI CCRYGG 1 cut(s) 968
BtsCI GGATG 4 cut(s) 895, 1049, 1078, 1273
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 3 cut(s) 33, 87, 908
BveI ACCTGC 2 cut(s) 940, 1010
CfoI GCGC 1 cut(s) 38
Cfr13I GGNCC 3 cut(s) 42, 219, 905
Csp6I GTAC 7 cut(s) 136, 205, 331, 841, 913, 1060, 1219
CspCI CAANNNNNGTGG 2 cut(s) 992, 1027
CviAII CATG 9 cut(s) 202, 241, 543, 770, 920, 969, 991, 1063, 1240
CviQI GTAC 7 cut(s) 136, 205, 331, 841, 913, 1060, 1219
DdeI CTNAG 7 cut(s) 215, 507, 522, 585, 1116, 1176, 1197
DinI GGCGCC 1 cut(s) 37
DpnI GATC 4 cut(s) 32, 600, 694, 758
DpnII GATC 4 cut(s) 30, 598, 692, 756
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 279, 459
EarI CTCTTC 2 cut(s) 279, 459
Ecl136II GAGCTC 1 cut(s) 70
Eco130I CCWWGG 2 cut(s) 270, 968
Eco24I GRGCYC 1 cut(s) 72
Eco31I GGTCTC 2 cut(s) 173, 285
Eco47I GGWCC 1 cut(s) 219
Eco53kI GAGCTC 1 cut(s) 70
Eco72I CACGTG 2 cut(s) 65, 129
Eco88I CYCGRG 3 cut(s) 196, 295, 648
EcoICRI GAGCTC 1 cut(s) 70
EcoO109I RGGNCCY 1 cut(s) 42
EcoRII CCWGG 3 cut(s) 51, 529, 724
EcoT14I CCWWGG 2 cut(s) 270, 968
EcoT22I ATGCAT 1 cut(s) 544
EcoT38I GRGCYC 1 cut(s) 72
EgeI GGCGCC 1 cut(s) 37
EheI GGCGCC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 270, 968
FaeI CATG 9 cut(s) 205, 244, 546, 773, 923, 972, 994, 1066, 1243
FalI AAGNNNNNCTT 2 cut(s) 908, 940
FaqI GGGAC 1 cut(s) 266
FatI CATG 9 cut(s) 201, 240, 542, 769, 919, 968, 990, 1062, 1239
FauI CCCGC 1 cut(s) 69
FbaI TGATCA 1 cut(s) 756
FblI GTMKAC 1 cut(s) 964
Fnu4HI GCNGC 4 cut(s) 60, 622, 978, 1227
FokI GGATG 4 cut(s) 902, 1036, 1085, 1280
FriOI GRGCYC 1 cut(s) 72
Fsp4HI GCNGC 4 cut(s) 60, 622, 978, 1227
FspBI CTAG 2 cut(s) 15, 690
GlaI GCGC 1 cut(s) 37
GluI GCNGC 4 cut(s) 60, 622, 978, 1227
GsuI CTGGAG 2 cut(s) 126, 681
HaeII RGCGCY 1 cut(s) 39
HaeIII GGCC 5 cut(s) 44, 51, 269, 907, 977
HapII CCGG 7 cut(s) 39, 48, 73, 250, 308, 837, 1264
HhaI GCGC 1 cut(s) 38
Hin1I GRCGYC 1 cut(s) 36
Hin1II CATG 9 cut(s) 205, 244, 546, 773, 923, 972, 994, 1066, 1243
Hin6I GCGC 1 cut(s) 36
HinP1I GCGC 1 cut(s) 36
HindIII AAGCTT 2 cut(s) 1080, 1101
HinfI GANTC 4 cut(s) 152, 526, 559, 1191
HpaII CCGG 7 cut(s) 39, 48, 73, 250, 308, 837, 1264
HphI GGTGA 2 cut(s) 442, 464
Hpy166II GTNNAC 5 cut(s) 136, 138, 193, 679, 965
Hpy188I TCNGA 5 cut(s) 157, 525, 596, 1108, 1198
Hpy188III TCNNGA 6 cut(s) 143, 217, 584, 650, 690, 863
Hpy8I GTNNAC 5 cut(s) 136, 138, 193, 679, 965
HpyAV CCTTC 8 cut(s) 74, 269, 294, 421, 541, 954, 964, 967
HpyCH4III ACNGT 5 cut(s) 91, 578, 886, 899, 912
HpyCH4IV ACGT 3 cut(s) 21, 64, 128
HpyCH4V TGCA 8 cut(s) 4, 542, 686, 815, 834, 941, 1172, 1226
HpyF10VI GCNNNNNNNGC 1 cut(s) 665
HpyF3I CTNAG 7 cut(s) 215, 507, 522, 585, 1116, 1176, 1197
HpySE526I ACGT 3 cut(s) 21, 64, 128
Hsp92I GRCGYC 1 cut(s) 36
Hsp92II CATG 9 cut(s) 205, 244, 546, 773, 923, 972, 994, 1066, 1243
HspAI GCGC 1 cut(s) 36
KasI GGCGCC 1 cut(s) 35
Ksp22I TGATCA 1 cut(s) 756
Kzo9I GATC 4 cut(s) 30, 598, 692, 756
LmnI GCTCC 1 cut(s) 75
Lsp1109I GCAGC 2 cut(s) 633, 1238
LweI GCATC 3 cut(s) 466, 543, 695
MaeI CTAG 2 cut(s) 15, 690
MaeII ACGT 3 cut(s) 21, 64, 128
MaeIII GTNAC 3 cut(s) 83, 311, 880
MalI GATC 4 cut(s) 32, 600, 694, 758
MbiI CCGCTC 1 cut(s) 980
MboI GATC 4 cut(s) 30, 598, 692, 756
MboII GAAGA 6 cut(s) 91, 296, 476, 785, 979, 1172
MfeI CAATTG 1 cut(s) 162
MflI RGATCY 1 cut(s) 692
MhlI GDGCHC 2 cut(s) 72, 769
MlsI TGGCCA 1 cut(s) 269
MluCI AATT 3 cut(s) 162, 571, 609
MluNI TGGCCA 1 cut(s) 269
Mly113I GGCGCC 1 cut(s) 36
MlyI GAGTC 2 cut(s) 161, 1200
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 1 cut(s) 269
Mph1103I ATGCAT 1 cut(s) 544
MscI TGGCCA 1 cut(s) 269
MslI CAYNNNNRTG 2 cut(s) 131, 774
Msp20I TGGCCA 1 cut(s) 269
MspA1I CMGCKG 1 cut(s) 624
MspI CCGG 7 cut(s) 39, 48, 73, 250, 308, 837, 1264
MspR9I CCNGG 8 cut(s) 40, 53, 251, 309, 531, 726, 838, 1265
MunI CAATTG 1 cut(s) 162
MvaI CCWGG 3 cut(s) 53, 531, 726
MwoI GCNNNNNNNGC 1 cut(s) 665
NarI GGCGCC 1 cut(s) 36
NciI CCSGG 5 cut(s) 40, 251, 309, 838, 1265
NcoI CCATGG 1 cut(s) 968
NdeII GATC 4 cut(s) 30, 598, 692, 756
NlaIII CATG 9 cut(s) 205, 244, 546, 773, 923, 972, 994, 1066, 1243
NlaIV GGNNCC 3 cut(s) 37, 43, 248
NmuCI GTSAC 3 cut(s) 83, 311, 880
NsiI ATGCAT 1 cut(s) 544
NspI RCATGY 3 cut(s) 205, 923, 1243
OliI CACNNNNGTG 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 196
PaqCI CACCTGC 1 cut(s) 940
PfeI GAWTC 2 cut(s) 526, 559
PfoI TCCNGGA 2 cut(s) 249, 1263
PkrI GCNGC 4 cut(s) 61, 623, 979, 1228
PleI GAGTC 2 cut(s) 160, 1199
PluTI GGCGCC 1 cut(s) 39
PmaCI CACGTG 2 cut(s) 65, 129
PmlI CACGTG 2 cut(s) 65, 129
PpsI GAGTC 2 cut(s) 160, 1199
Ppu21I YACGTR 3 cut(s) 22, 65, 129
Psp124BI GAGCTC 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 51, 529, 724
PspCI CACGTG 2 cut(s) 65, 129
PspGI CCWGG 3 cut(s) 51, 529, 724
PspN4I GGNNCC 3 cut(s) 37, 43, 248
PspPI GGNCC 3 cut(s) 42, 219, 905
PspXI VCTCGAGB 1 cut(s) 196
PsuI RGATCY 1 cut(s) 692
RsaI GTAC 7 cut(s) 137, 206, 332, 842, 914, 1061, 1220
RsaNI GTAC 7 cut(s) 136, 205, 331, 841, 913, 1060, 1219
RseI CAYNNNNRTG 2 cut(s) 131, 774
SacI GAGCTC 1 cut(s) 72
SatI GCNGC 4 cut(s) 60, 622, 978, 1227
Sau3AI GATC 4 cut(s) 30, 598, 692, 756
Sau96I GGNCC 3 cut(s) 42, 219, 905
ScaI AGTACT 1 cut(s) 332
SchI GAGTC 2 cut(s) 161, 1200
ScrFI CCNGG 8 cut(s) 40, 53, 251, 309, 531, 726, 838, 1265
SduI GDGCHC 2 cut(s) 72, 769
SfaNI GCATC 3 cut(s) 466, 543, 695
SfcI CTRYAG 1 cut(s) 1230
SfoI GGCGCC 1 cut(s) 37
Sfr274I CTCGAG 1 cut(s) 196
SinI GGWCC 1 cut(s) 219
SlaI CTCGAG 1 cut(s) 196
SmiMI CAYNNNNRTG 2 cut(s) 131, 774
SmlI CTYRAG 1 cut(s) 196
SmoI CTYRAG 1 cut(s) 196
Sse9I AATT 3 cut(s) 162, 571, 609
SsiI CCGC 4 cut(s) 59, 76, 624, 978
SspDI GGCGCC 1 cut(s) 35
SspMI CTAG 2 cut(s) 15, 690
SstI GAGCTC 1 cut(s) 72
StyD4I CCNGG 8 cut(s) 38, 51, 249, 307, 529, 724, 836, 1263
StyI CCWWGG 2 cut(s) 270, 968
TaaI ACNGT 5 cut(s) 91, 578, 886, 899, 912
TaiI ACGT 3 cut(s) 24, 67, 131
TaqI TCGA 7 cut(s) 102, 197, 366, 381, 864, 1036, 1189
TasI AATT 3 cut(s) 162, 571, 609
TatI WGTACW 5 cut(s) 135, 330, 912, 1059, 1218
TauI GCSGC 2 cut(s) 62, 980
TfiI GAWTC 2 cut(s) 526, 559
TscAI CASTG 3 cut(s) 33, 94, 915
TseFI GTSAC 3 cut(s) 83, 311, 880
TseI GCWGC 2 cut(s) 621, 1226
Tsp45I GTSAC 3 cut(s) 83, 311, 880
TspDTI ATGAA 5 cut(s) 297, 720, 786, 979, 1173
TspRI CASTG 3 cut(s) 33, 94, 915
VpaK11BI GGWCC 1 cut(s) 219
XbaI TCTAGA 1 cut(s) 689
XceI RCATGY 3 cut(s) 205, 923, 1243
XhoI CTCGAG 1 cut(s) 196
XmiI GTMKAC 1 cut(s) 964
XspI CTAG 2 cut(s) 15, 690
ZrmI AGTACT 1 cut(s) 332
Zsp2I ATGCAT 1 cut(s) 544
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.