Rmu_sc0002365.1_g000025

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002365.1
OG0000323
Physical Location & Seq
Forward (+)
124326 .. 124805
480 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002365.1_g000025.1.cds

Sequence Viewer

Length: 480 bp
atggctgatgttccctctgctcattcggctacaatgcatcccttataccgccacgtagcagtgattggtgccggtaccagcggattggtggcggcacgtgcgctccggcatgaagatcacagcgtagtagtgtttgagcgaggtgaccaaatgggtgctacgtgggtgtacaccacagaagtggagtccgacccaatcggtctccacccaaacagaaccatagtccactcgaacatgtaccagtctctcaggaccaaccctcccagagagatcatggggttcagggactacccatctgcggccaaggaacaagatgaagagagagacccgagaacgtttccgggtcacagagaggtgttgaagtacttgaatgacttcgccggcgagtttaagatttgtgagatggtgaggtttaatttgagactcaggtggtgttcgtgggtttggtggagggtggcaagtggtgaagtggatggttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

159

Amino Acids

18.18

Weight (kDa)

6.23

Isoelectric Point (pI)

31.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 74
AccB1I GGYRCC 2 cut(s) 68, 74
AciI CCGC 4 cut(s) 49, 81, 92, 299
AclI AACGTT 1 cut(s) 335
AcoI YGGCCR 1 cut(s) 300
AcvI CACGTG 1 cut(s) 98
AfaI GTAC 4 cut(s) 76, 170, 239, 365
AfiI CCNNNNNNNGG 1 cut(s) 298
AflIII ACRYGT 1 cut(s) 234
AgsI TTSAA 2 cut(s) 361, 370
AleI CACNNNNGTG 1 cut(s) 179
Alw26I GTCTC 4 cut(s) 206, 249, 318, 415
Ama87I CYCGRG 1 cut(s) 328
AoxI GGCC 1 cut(s) 300
Asp700I GAANNNNTTC 1 cut(s) 374
Asp718I GGTACC 1 cut(s) 74
AspLEI GCGC 1 cut(s) 103
AspS9I GGNCC 1 cut(s) 252
AsuC2I CCSGG 1 cut(s) 342
AsuHPI GGTGA 3 cut(s) 155, 418, 476
AvaI CYCGRG 1 cut(s) 328
AvaII GGWCC 1 cut(s) 252
BanI GGYRCC 2 cut(s) 68, 74
BbrPI CACGTG 1 cut(s) 98
BccI CCATC 3 cut(s) 301, 397, 467
BcnI CCSGG 1 cut(s) 342
BcoDI GTCTC 4 cut(s) 206, 249, 318, 415
BisI GCNGC 2 cut(s) 93, 300
BlsI GCNGC 2 cut(s) 94, 301
BmcAI AGTACT 1 cut(s) 365
Bme1390I CCNGG 1 cut(s) 342
Bme18I GGWCC 1 cut(s) 252
BmeT110I CYCGRG 1 cut(s) 328
BmgT120I GGNCC 1 cut(s) 252
BmiI GGNNCC 2 cut(s) 70, 76
BmrFI CCNGG 1 cut(s) 342
BmsI GCATC 1 cut(s) 46
BpuMI CCSGG 1 cut(s) 342
BsaAI YACGTR 3 cut(s) 55, 98, 162
BsaI GGTCTC 2 cut(s) 206, 318
BsaJI CCNNGG 1 cut(s) 303
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 244, 274
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse118I RCCGGY 2 cut(s) 71, 380
Bse1I ACTGG 1 cut(s) 241
BseDI CCNNGG 1 cut(s) 303
BseGI GGATG 2 cut(s) 37, 478
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMII CTCAG 2 cut(s) 262, 439
BseNI ACTGG 1 cut(s) 241
BshFI GGCC 1 cut(s) 302
BshNI GGYRCC 2 cut(s) 68, 74
BsiHKCI CYCGRG 1 cut(s) 328
BsiSI CCGG 4 cut(s) 72, 106, 341, 381
BslFI GGGAC 1 cut(s) 299
BslI CCNNNNNNNGG 1 cut(s) 298
BsmAI GTCTC 4 cut(s) 206, 249, 318, 415
BsmFI GGGAC 1 cut(s) 299
BsnI GGCC 1 cut(s) 302
Bso31I GGTCTC 2 cut(s) 206, 318
BsoBI CYCGRG 1 cut(s) 328
Bsp1407I TGTACA 1 cut(s) 168
Bsp143I GATC 2 cut(s) 115, 270
BspACI CCGC 4 cut(s) 49, 81, 92, 299
BspANI GGCC 1 cut(s) 302
BspCNI CTCAG 2 cut(s) 261, 438
BspLI GGNNCC 2 cut(s) 70, 76
BspT107I GGYRCC 2 cut(s) 68, 74
BspTNI GGTCTC 2 cut(s) 206, 318
BsrFI RCCGGY 2 cut(s) 71, 380
BsrGI TGTACA 1 cut(s) 168
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 2 cut(s) 71, 380
BssECI CCNNGG 1 cut(s) 303
BssMI GATC 2 cut(s) 115, 270
BssT1I CCWWGG 1 cut(s) 303
Bst6I CTCTTC 1 cut(s) 312
BstAUI TGTACA 1 cut(s) 168
BstBAI YACGTR 3 cut(s) 55, 98, 162
BstC8I GCNNGC 1 cut(s) 382
BstDEI CTNAG 2 cut(s) 248, 425
BstEII GGTNACC 1 cut(s) 143
BstF5I GGATG 2 cut(s) 37, 478
BstHHI GCGC 1 cut(s) 103
BstKTI GATC 2 cut(s) 118, 273
BstMAI GTCTC 4 cut(s) 206, 249, 318, 415
BstMBI GATC 2 cut(s) 115, 270
BstMWI GCNNNNNNNGC 2 cut(s) 26, 98
BstNSI RCATGY 1 cut(s) 238
BstPI GGTNACC 1 cut(s) 143
BstSCI CCNGG 1 cut(s) 340
BstXI CCANNNNNNTGG 2 cut(s) 85, 181
BsuRI GGCC 1 cut(s) 302
BtsCI GGATG 2 cut(s) 37, 478
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 1 cut(s) 66
Cac8I GCNNGC 1 cut(s) 382
CfoI GCGC 1 cut(s) 103
Cfr10I RCCGGY 2 cut(s) 71, 380
Cfr13I GGNCC 1 cut(s) 252
Csp6I GTAC 4 cut(s) 75, 169, 238, 364
CviAII CATG 3 cut(s) 110, 235, 274
CviJI RGCY 3 cut(s) 5, 29, 302
CviKI_1 RGCY 3 cut(s) 5, 29, 302
CviQI GTAC 4 cut(s) 75, 169, 238, 364
DdeI CTNAG 2 cut(s) 248, 425
DpnI GATC 2 cut(s) 117, 272
DpnII GATC 2 cut(s) 115, 270
EaeI YGGCCR 1 cut(s) 300
Eam1104I CTCTTC 1 cut(s) 312
EarI CTCTTC 1 cut(s) 312
Eco130I CCWWGG 1 cut(s) 303
Eco31I GGTCTC 2 cut(s) 206, 318
Eco47I GGWCC 1 cut(s) 252
Eco72I CACGTG 1 cut(s) 98
Eco88I CYCGRG 1 cut(s) 328
Eco91I GGTNACC 1 cut(s) 143
EcoO65I GGTNACC 1 cut(s) 143
EcoT14I CCWWGG 1 cut(s) 303
EcoT22I ATGCAT 1 cut(s) 39
ErhI CCWWGG 1 cut(s) 303
FaeI CATG 3 cut(s) 113, 238, 277
FaiI YATR 5 cut(s) 46, 111, 221, 236, 275
FaqI GGGAC 1 cut(s) 299
FatI CATG 3 cut(s) 109, 234, 273
Fnu4HI GCNGC 2 cut(s) 93, 300
FokI GGATG 1 cut(s) 24
Fsp4HI GCNGC 2 cut(s) 93, 300
GlaI GCGC 1 cut(s) 102
GluI GCNGC 2 cut(s) 93, 300
HaeIII GGCC 1 cut(s) 302
HapII CCGG 4 cut(s) 72, 106, 341, 381
HhaI GCGC 1 cut(s) 103
Hin1II CATG 3 cut(s) 113, 238, 277
Hin6I GCGC 1 cut(s) 101
HinP1I GCGC 1 cut(s) 101
HinfI GANTC 2 cut(s) 185, 423
HpaII CCGG 4 cut(s) 72, 106, 341, 381
HphI GGTGA 3 cut(s) 155, 418, 476
Hpy166II GTNNAC 3 cut(s) 169, 171, 226
Hpy188I TCNGA 1 cut(s) 190
Hpy188III TCNNGA 1 cut(s) 250
Hpy8I GTNNAC 3 cut(s) 169, 171, 226
HpyCH4IV ACGT 4 cut(s) 54, 97, 161, 335
HpyCH4V TGCA 1 cut(s) 37
HpyF10VI GCNNNNNNNGC 2 cut(s) 26, 98
HpyF3I CTNAG 2 cut(s) 248, 425
HpySE526I ACGT 4 cut(s) 54, 97, 161, 335
Hsp92II CATG 3 cut(s) 113, 238, 277
HspAI GCGC 1 cut(s) 101
KpnI GGTACC 1 cut(s) 78
KroI GCCGGC 1 cut(s) 380
KroNI GCCGGC 1 cut(s) 382
Kzo9I GATC 2 cut(s) 115, 270
LmnI GCTCC 1 cut(s) 108
LweI GCATC 1 cut(s) 46
MaeII ACGT 4 cut(s) 54, 97, 161, 335
MaeIII GTNAC 2 cut(s) 143, 344
MalI GATC 2 cut(s) 117, 272
MboI GATC 2 cut(s) 115, 270
MboII GAAGA 2 cut(s) 125, 329
MluCI AATT 1 cut(s) 415
MlyI GAGTC 2 cut(s) 194, 417
MmeI TCCRAC 1 cut(s) 213
MnlI CCTC 6 cut(s) 25, 134, 270, 346, 402, 444
Mph1103I ATGCAT 1 cut(s) 39
MreI CGCCGGCG 1 cut(s) 380
MroNI GCCGGC 1 cut(s) 380
MroXI GAANNNNTTC 1 cut(s) 374
MseI TTAA 3 cut(s) 390, 414, 478
MslI CAYNNNNRTG 1 cut(s) 179
MspA1I CMGCKG 1 cut(s) 81
MspI CCGG 4 cut(s) 72, 106, 341, 381
MspR9I CCNGG 1 cut(s) 342
MwoI GCNNNNNNNGC 2 cut(s) 26, 98
NaeI GCCGGC 1 cut(s) 382
NciI CCSGG 1 cut(s) 342
NdeII GATC 2 cut(s) 115, 270
NgoMIV GCCGGC 1 cut(s) 380
NlaIII CATG 3 cut(s) 113, 238, 277
NlaIV GGNNCC 2 cut(s) 70, 76
NmuCI GTSAC 2 cut(s) 143, 344
NsiI ATGCAT 1 cut(s) 39
NspI RCATGY 1 cut(s) 238
OliI CACNNNNGTG 1 cut(s) 179
PciI ACATGT 1 cut(s) 234
PdiI GCCGGC 1 cut(s) 382
PdmI GAANNNNTTC 1 cut(s) 374
PkrI GCNGC 2 cut(s) 94, 301
PleI GAGTC 2 cut(s) 193, 417
PmaCI CACGTG 1 cut(s) 98
PmlI CACGTG 1 cut(s) 98
PpsI GAGTC 2 cut(s) 193, 417
Ppu21I YACGTR 3 cut(s) 55, 98, 162
PscI ACATGT 1 cut(s) 234
Psp1406I AACGTT 1 cut(s) 335
PspCI CACGTG 1 cut(s) 98
PspEI GGTNACC 1 cut(s) 143
PspN4I GGNNCC 2 cut(s) 70, 76
PspPI GGNCC 1 cut(s) 252
RsaI GTAC 4 cut(s) 76, 170, 239, 365
RsaNI GTAC 4 cut(s) 75, 169, 238, 364
RseI CAYNNNNRTG 1 cut(s) 179
SaqAI TTAA 3 cut(s) 390, 414, 478
SatI GCNGC 2 cut(s) 93, 300
Sau3AI GATC 2 cut(s) 115, 270
Sau96I GGNCC 1 cut(s) 252
ScaI AGTACT 1 cut(s) 365
SchI GAGTC 2 cut(s) 194, 417
ScrFI CCNGG 1 cut(s) 342
SetI ASST 8 cut(s) 57, 100, 145, 164, 338, 357, 413, 431
SfaNI GCATC 1 cut(s) 46
SgrAI CRCCGGYG 1 cut(s) 380
SinI GGWCC 1 cut(s) 252
SmiMI CAYNNNNRTG 1 cut(s) 179
Sse9I AATT 1 cut(s) 415
SsiI CCGC 4 cut(s) 49, 81, 92, 299
StyD4I CCNGG 1 cut(s) 340
StyI CCWWGG 1 cut(s) 303
TaiI ACGT 4 cut(s) 57, 100, 164, 338
TaqI TCGA 1 cut(s) 230
TaqII GACCGA 1 cut(s) 188
TasI AATT 1 cut(s) 415
TatI WGTACW 2 cut(s) 168, 363
TauI GCSGC 2 cut(s) 95, 302
Tru1I TTAA 3 cut(s) 390, 414, 478
Tru9I TTAA 3 cut(s) 390, 414, 478
TscAI CASTG 1 cut(s) 66
TseFI GTSAC 2 cut(s) 143, 344
Tsp45I GTSAC 2 cut(s) 143, 344
TspDTI ATGAA 2 cut(s) 126, 330
TspRI CASTG 1 cut(s) 66
VpaK11BI GGWCC 1 cut(s) 252
XceI RCATGY 1 cut(s) 238
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 271
XmnI GAANNNNTTC 1 cut(s) 374
ZrmI AGTACT 1 cut(s) 365
Zsp2I ATGCAT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.