Rh7CG210900

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000323
Physical Location & Seq
Reverse (-)
18930440 .. 18931239
800 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG210900.1

Sequence Viewer

Length: 330 bp
ATGGGTGCTACGTGGGTGTACACCACAGAAGTGGAGTCCGACCCAATCGGTCTCCACCCAAACAGAACCATAGTCCACTCGAGCATGTACCAGTCTCTCAGGACCAACCCTCCCAGAGAGATCATGGGGTTCCGGGACTACCCATCTGCGGCCAAGGAACAAGATGAAGAGAGAGACCCGAGAAGGTTTCCGGGTCACAGAGAGGTGTTGAAGTACTTGAATGACTTCGCCGGCGAGTTTAAGATTTGTGAGATGGTGAGGTTTAATTTGAGACTCAGGTGGTGTTCGTGGGTTTGGTGGAGGGTGGCAAGTGGTGAAGTGGATGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

109

Amino Acids

12.91

Weight (kDa)

6.29

Isoelectric Point (pI)

36.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 149
AcoI YGGCCR 1 cut(s) 150
AfaI GTAC 3 cut(s) 20, 89, 215
AfiI CCNNNNNNNGG 1 cut(s) 148
AgsI TTSAA 2 cut(s) 211, 220
AleI CACNNNNGTG 1 cut(s) 29
Alw26I GTCTC 4 cut(s) 56, 99, 168, 265
Ama87I CYCGRG 2 cut(s) 79, 178
AoxI GGCC 1 cut(s) 150
Asp700I GAANNNNTTC 1 cut(s) 224
AspS9I GGNCC 1 cut(s) 102
AsuC2I CCSGG 2 cut(s) 134, 192
AsuHPI GGTGA 2 cut(s) 268, 326
AvaI CYCGRG 2 cut(s) 79, 178
AvaII GGWCC 1 cut(s) 102
BccI CCATC 3 cut(s) 151, 247, 317
BcnI CCSGG 2 cut(s) 134, 192
BcoDI GTCTC 4 cut(s) 56, 99, 168, 265
BisI GCNGC 1 cut(s) 150
BlsI GCNGC 1 cut(s) 151
BmcAI AGTACT 1 cut(s) 215
Bme1390I CCNGG 2 cut(s) 134, 192
Bme18I GGWCC 1 cut(s) 102
BmeT110I CYCGRG 2 cut(s) 79, 178
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 131
BmrFI CCNGG 2 cut(s) 134, 192
BpuMI CCSGG 2 cut(s) 134, 192
BsaAI YACGTR 1 cut(s) 12
BsaI GGTCTC 2 cut(s) 56, 168
BsaJI CCNNGG 1 cut(s) 153
BsaXI ACNNNNNCTCC 2 cut(s) 94, 124
Bsc4I CCNNNNNNNGG 1 cut(s) 148
Bse118I RCCGGY 1 cut(s) 230
Bse1I ACTGG 1 cut(s) 91
BseDI CCNNGG 1 cut(s) 153
BseGI GGATG 1 cut(s) 328
BseLI CCNNNNNNNGG 1 cut(s) 148
BseMII CTCAG 2 cut(s) 112, 289
BseNI ACTGG 1 cut(s) 91
BshFI GGCC 1 cut(s) 152
BsiHKCI CYCGRG 2 cut(s) 79, 178
BsiSI CCGG 3 cut(s) 133, 191, 231
BslFI GGGAC 1 cut(s) 149
BslI CCNNNNNNNGG 1 cut(s) 148
BsmAI GTCTC 4 cut(s) 56, 99, 168, 265
BsmFI GGGAC 1 cut(s) 149
BsnI GGCC 1 cut(s) 152
Bso31I GGTCTC 2 cut(s) 56, 168
BsoBI CYCGRG 2 cut(s) 79, 178
Bsp1407I TGTACA 1 cut(s) 18
Bsp143I GATC 1 cut(s) 120
BspACI CCGC 1 cut(s) 149
BspANI GGCC 1 cut(s) 152
BspCNI CTCAG 2 cut(s) 111, 288
BspLI GGNNCC 1 cut(s) 131
BspTNI GGTCTC 2 cut(s) 56, 168
BsrFI RCCGGY 1 cut(s) 230
BsrGI TGTACA 1 cut(s) 18
BsrI ACTGG 1 cut(s) 91
BssAI RCCGGY 1 cut(s) 230
BssECI CCNNGG 1 cut(s) 153
BssMI GATC 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 153
Bst6I CTCTTC 1 cut(s) 162
BstAUI TGTACA 1 cut(s) 18
BstBAI YACGTR 1 cut(s) 12
BstC8I GCNNGC 1 cut(s) 232
BstDEI CTNAG 2 cut(s) 98, 275
BstF5I GGATG 1 cut(s) 328
BstKTI GATC 1 cut(s) 123
BstMAI GTCTC 4 cut(s) 56, 99, 168, 265
BstMBI GATC 1 cut(s) 120
BstNSI RCATGY 1 cut(s) 88
BstSCI CCNGG 2 cut(s) 132, 190
BstXI CCANNNNNNTGG 1 cut(s) 31
BsuRI GGCC 1 cut(s) 152
BtsCI GGATG 1 cut(s) 328
Cac8I GCNNGC 1 cut(s) 232
Cfr10I RCCGGY 1 cut(s) 230
Cfr13I GGNCC 1 cut(s) 102
Csp6I GTAC 3 cut(s) 19, 88, 214
CviAII CATG 2 cut(s) 85, 124
CviJI RGCY 1 cut(s) 152
CviKI_1 RGCY 1 cut(s) 152
CviQI GTAC 3 cut(s) 19, 88, 214
DdeI CTNAG 2 cut(s) 98, 275
DpnI GATC 1 cut(s) 122
DpnII GATC 1 cut(s) 120
EaeI YGGCCR 1 cut(s) 150
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco130I CCWWGG 1 cut(s) 153
Eco31I GGTCTC 2 cut(s) 56, 168
Eco47I GGWCC 1 cut(s) 102
Eco88I CYCGRG 2 cut(s) 79, 178
EcoT14I CCWWGG 1 cut(s) 153
ErhI CCWWGG 1 cut(s) 153
FaeI CATG 2 cut(s) 88, 127
FaiI YATR 3 cut(s) 71, 86, 125
FaqI GGGAC 1 cut(s) 149
FatI CATG 2 cut(s) 84, 123
Fnu4HI GCNGC 1 cut(s) 150
Fsp4HI GCNGC 1 cut(s) 150
GluI GCNGC 1 cut(s) 150
HaeIII GGCC 1 cut(s) 152
HapII CCGG 3 cut(s) 133, 191, 231
Hin1II CATG 2 cut(s) 88, 127
HinfI GANTC 2 cut(s) 35, 273
HpaII CCGG 3 cut(s) 133, 191, 231
HphI GGTGA 2 cut(s) 268, 326
Hpy166II GTNNAC 3 cut(s) 19, 21, 76
Hpy188I TCNGA 1 cut(s) 40
Hpy188III TCNNGA 1 cut(s) 100
Hpy8I GTNNAC 3 cut(s) 19, 21, 76
HpyAV CCTTC 1 cut(s) 177
HpyCH4IV ACGT 1 cut(s) 11
HpyF3I CTNAG 2 cut(s) 98, 275
HpySE526I ACGT 1 cut(s) 11
Hsp92II CATG 2 cut(s) 88, 127
KroI GCCGGC 1 cut(s) 230
KroNI GCCGGC 1 cut(s) 232
Kzo9I GATC 1 cut(s) 120
LpnPI CCDG 7 cut(s) 85, 104, 127, 146, 204, 244, 262
MaeII ACGT 1 cut(s) 11
MaeIII GTNAC 1 cut(s) 194
MalI GATC 1 cut(s) 122
MboI GATC 1 cut(s) 120
MboII GAAGA 1 cut(s) 179
MluCI AATT 1 cut(s) 265
MlyI GAGTC 2 cut(s) 44, 267
MmeI TCCRAC 1 cut(s) 63
MnlI CCTC 4 cut(s) 120, 196, 252, 294
MreI CGCCGGCG 1 cut(s) 230
MroNI GCCGGC 1 cut(s) 230
MroXI GAANNNNTTC 1 cut(s) 224
MseI TTAA 3 cut(s) 240, 264, 328
MslI CAYNNNNRTG 1 cut(s) 29
MspI CCGG 3 cut(s) 133, 191, 231
MspR9I CCNGG 2 cut(s) 134, 192
NaeI GCCGGC 1 cut(s) 232
NciI CCSGG 2 cut(s) 134, 192
NdeII GATC 1 cut(s) 120
NgoMIV GCCGGC 1 cut(s) 230
NlaIII CATG 2 cut(s) 88, 127
NlaIV GGNNCC 1 cut(s) 131
NmuCI GTSAC 1 cut(s) 194
NspI RCATGY 1 cut(s) 88
OliI CACNNNNGTG 1 cut(s) 29
PaeR7I CTCGAG 1 cut(s) 79
PdiI GCCGGC 1 cut(s) 232
PdmI GAANNNNTTC 1 cut(s) 224
PfoI TCCNGGA 1 cut(s) 132
PkrI GCNGC 1 cut(s) 151
PleI GAGTC 2 cut(s) 43, 267
PpsI GAGTC 2 cut(s) 43, 267
Ppu21I YACGTR 1 cut(s) 12
PspN4I GGNNCC 1 cut(s) 131
PspPI GGNCC 1 cut(s) 102
PspXI VCTCGAGB 1 cut(s) 79
RsaI GTAC 3 cut(s) 20, 89, 215
RsaNI GTAC 3 cut(s) 19, 88, 214
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 3 cut(s) 240, 264, 328
SatI GCNGC 1 cut(s) 150
Sau3AI GATC 1 cut(s) 120
Sau96I GGNCC 1 cut(s) 102
ScaI AGTACT 1 cut(s) 215
SchI GAGTC 2 cut(s) 44, 267
ScrFI CCNGG 2 cut(s) 134, 192
SetI ASST 5 cut(s) 14, 188, 207, 263, 281
Sfr274I CTCGAG 1 cut(s) 79
SgrAI CRCCGGYG 1 cut(s) 230
SinI GGWCC 1 cut(s) 102
SlaI CTCGAG 1 cut(s) 79
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 1 cut(s) 79
SmoI CTYRAG 1 cut(s) 79
Sse9I AATT 1 cut(s) 265
SsiI CCGC 1 cut(s) 149
StyD4I CCNGG 2 cut(s) 132, 190
StyI CCWWGG 1 cut(s) 153
TaiI ACGT 1 cut(s) 14
TaqI TCGA 1 cut(s) 80
TaqII GACCGA 1 cut(s) 38
TasI AATT 1 cut(s) 265
TatI WGTACW 2 cut(s) 18, 213
TauI GCSGC 1 cut(s) 152
Tru1I TTAA 3 cut(s) 240, 264, 328
Tru9I TTAA 3 cut(s) 240, 264, 328
TseFI GTSAC 1 cut(s) 194
Tsp45I GTSAC 1 cut(s) 194
TspDTI ATGAA 1 cut(s) 180
VpaK11BI GGWCC 1 cut(s) 102
XceI RCATGY 1 cut(s) 88
XcmI CCANNNNNNNNNTGG 1 cut(s) 121
XhoI CTCGAG 1 cut(s) 79
XmnI GAANNNNTTC 1 cut(s) 224
ZrmI AGTACT 1 cut(s) 215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.