FvH4_5g36860

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000323
Physical Location & Seq
Reverse (-)
27006814 .. 27010065
3252 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g36860.t1

Sequence Viewer

Length: 1434 bp
ATGGCTGATCCTAGCTCTGCTCATTCAGATGCAATGCATACCCTATCCCGCCACGTAGCAGTGATCGGCGCCGGTGCCAGCGGTTTGGTGGCGGCACGTGAGCTCCGGCGGGAAGGTCACAGCGTCGTAGTGTTTGAGCGAGGAGACCAATTAGGTGGCACCTGGGTCTACACCCCAGAAGTGGAGTCCGACCCAATTGGTCTCCACCCAAACAGAACCATAGTCCACTCCAGCATTTACCAGTCTCTCAGGACTAACCTCCCCAGAGAGATTATGGGGTTCCGGGACTACCCGTTTGCGGTCAAGGAAGAAGACGAAGGGAGAGACCCGAGAAGGTTTCCGGGTCACAGAGAGGTGTTGATGTACTTGAATGACTTCGCCGGCGAGTATGGAATTTCTGAGATGGTGAGGTTTGAGACTGAGGTGGTATTCGTGGGTTTGGTGGAGGGTGGCAAGTGGATGGTTAAGTCCAAGAGGAAAACAAGCGATGAGGGTTTGGAAGAGATTTATGATGCTGTGGTTGTTTGTTGTGGGCATTATACTAAGCCTCGTGTTGCAGAAATCCCAGGTATCACTACATGGAAAGGGAAGCAAATTCACAGCCACAACTATCGAACTCCGGAGCCTTTTCGAGATCAAGTTGTAATTTTGATAGGGAGCTCAGCAAGTGCTATTGATATCTCTCGAGGCATAGCTGGAGTTGCAAAAGAAGTCCACATTTCATCTCGATCTGTTGCTTCCGAAACCACTGAGAAGAAGCCTGACCTTGCAACCCTGTGTCTTACTGCTATGATTGATGGCCATGACAACATGTGGCTACACTCTCAGATTAAAAGTGTCCATGGAGATGGTAGTAGTGTAGTTTTCGAAGATGGAAGTGTTGTCGTTGCGGACACCATACTTCATTGCACAGGGTACAAATATCATTTCCCTTTTCTTGAAACAAATGGCATTGTAACTGTGGACGAGGATGACAACCGTGTTGGGCCACTGTTCAAGCATGTCTTCCCGCCCGCCTTGGCACCGTCGCTTTCTTTTGTTGGGGTTCCATGGAGGGCGATTCCTTTCCCCTGTTTTGAACTTCAAAGCAAGTGGATAGCAGGAGTTTTGTCGAACCGAATTGCCCTTCCTTCTAAAGAGGAGATGATAGAGGATGTTAGAGCTTTCTACTCTTCACTTGAAGCTTCTGGCAAACCTAGACGACACACTCATGACATTTCAAAGTCTTCGGGTGAATATTCTGGTTGGCTTGCAGCACAATGTGGTTGTCCCATACTCTCAGAAGAATGGAGAGAACATATGATACTCGCAGTAGCAAAGAATTGGATAGTCCGACCCAAGACATATCAAGATGAGTGGGATGATAACCATTTGGTACTGCAAGCTTATGAGTCCTTCAGGACAGGAGTCATTACAAGTTTACAGCTGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

478

Amino Acids

53.2

Weight (kDa)

5.84

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 17 - 244 6e-36 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 18 - 318 3.3e-17 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 18 - 54 6.2e-08 FAD dependent oxidoreductase
FAD_oxidored PF12831 19 - 88 5.7e-07 FAD dependent oxidoreductase
FAD_binding_2 PF00890 19 - 56 1.5e-06 FAD binding domain
NAD_binding_8 PF13450 21 - 55 6.5e-11 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 27 - 96 9.9e-07 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 85 - 324 1.7e-15 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 274 - 388 2.8e-14 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 4 cut(s) 68, 74, 158, 1021
AccI GTMKAC 1 cut(s) 168
AccIII TCCGGA 1 cut(s) 619
AciI CCGC 8 cut(s) 49, 81, 92, 109, 299, 890, 1010, 1014
AclWI GGATC 1 cut(s) 2
AcoI YGGCCR 1 cut(s) 799
AcsI RAATTY 2 cut(s) 393, 594
AcuI CTGAAG 1 cut(s) 1381
AcvI CACGTG 1 cut(s) 98
AcyI GRCGYC 1 cut(s) 69
AdeI CACNNNGTG 1 cut(s) 1262
AfaI GTAC 3 cut(s) 365, 917, 1377
AfiI CCNNNNNNNGG 2 cut(s) 181, 298
AflIII ACRYGT 1 cut(s) 810
AgsI TTSAA 7 cut(s) 370, 941, 997, 1079, 1085, 1181, 1221
AjnI CCWGG 2 cut(s) 161, 565
AluBI AGCT 8 cut(s) 15, 103, 660, 695, 1163, 1184, 1385, 1426
AluI AGCT 8 cut(s) 15, 103, 660, 695, 1163, 1184, 1385, 1426
Alw21I GWGCWC 2 cut(s) 105, 662
Alw26I GTCTC 5 cut(s) 138, 206, 249, 318, 410
AlwI GGATC 1 cut(s) 2
Ama87I CYCGRG 2 cut(s) 328, 684
Aor13HI TCCGGA 1 cut(s) 619
AoxI GGCC 2 cut(s) 799, 986
ApeKI GCWGC 1 cut(s) 1253
ApoI RAATTY 2 cut(s) 393, 594
ArsI GACNNNNNNTTYG 2 cut(s) 278, 310
Asp700I GAANNNNTTC 1 cut(s) 374
AspLEI GCGC 1 cut(s) 71
AspS9I GGNCC 1 cut(s) 986
AsuC2I CCSGG 2 cut(s) 284, 342
AsuHPI GGTGA 2 cut(s) 418, 1244
AsuII TTCGAA 1 cut(s) 867
AvaI CYCGRG 2 cut(s) 328, 684
BalI TGGCCA 1 cut(s) 801
BanI GGYRCC 4 cut(s) 68, 74, 158, 1021
BanII GRGCYC 2 cut(s) 105, 662
BauI CACGAG 1 cut(s) 549
BbrPI CACGTG 1 cut(s) 98
BbsI GAAGAC 3 cut(s) 318, 997, 1218
Bbv12I GWGCWC 2 cut(s) 105, 662
BbvI GCAGC 1 cut(s) 1265
BccI CCATC 5 cut(s) 397, 454, 791, 842, 866
BciT130I CCWGG 2 cut(s) 163, 567
BcnI CCSGG 2 cut(s) 284, 342
BcoDI GTCTC 5 cut(s) 138, 206, 249, 318, 410
BfaI CTAG 2 cut(s) 12, 1197
BfoI RGCGCY 1 cut(s) 72
BisI GCNGC 2 cut(s) 93, 1254
BlpI GCTNAGC 1 cut(s) 661
BlsI GCNGC 2 cut(s) 94, 1255
Bme1390I CCNGG 4 cut(s) 163, 284, 342, 567
BmeT110I CYCGRG 2 cut(s) 328, 684
BmgT120I GGNCC 1 cut(s) 986
BmiI GGNNCC 7 cut(s) 70, 76, 160, 281, 624, 1023, 1047
BmrFI CCNGG 4 cut(s) 163, 284, 342, 567
BmsI GCATC 2 cut(s) 19, 502
BoxI GACNNNNGTC 1 cut(s) 1406
BpiI GAAGAC 3 cut(s) 318, 997, 1218
BpmI CTGGAG 2 cut(s) 214, 717
Bpu1102I GCTNAGC 1 cut(s) 661
Bpu14I TTCGAA 1 cut(s) 867
BpuMI CCSGG 2 cut(s) 284, 342
BsaAI YACGTR 2 cut(s) 55, 98
BsaHI GRCGYC 1 cut(s) 69
BsaI GGTCTC 3 cut(s) 138, 206, 318
BsaJI CCNNGG 5 cut(s) 162, 565, 841, 1017, 1049
BsaWI WCCGGW 1 cut(s) 619
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 2 cut(s) 181, 298
Bse118I RCCGGY 2 cut(s) 71, 380
Bse1I ACTGG 1 cut(s) 241
Bse3DI GCAATG 2 cut(s) 39, 904
BseAI TCCGGA 1 cut(s) 619
BseBI CCWGG 2 cut(s) 163, 567
BseDI CCNNGG 5 cut(s) 162, 565, 841, 1017, 1049
BseGI GGATG 4 cut(s) 465, 976, 1159, 1366
BseLI CCNNNNNNNGG 2 cut(s) 181, 298
BseMI GCAATG 2 cut(s) 39, 904
BseMII CTCAG 7 cut(s) 262, 390, 411, 675, 741, 839, 1293
BseNI ACTGG 1 cut(s) 241
BseRI GAGGAG 2 cut(s) 156, 1154
BseXI GCAGC 1 cut(s) 1265
BshFI GGCC 2 cut(s) 801, 988
BshNI GGYRCC 4 cut(s) 68, 74, 158, 1021
BsiHKAI GWGCWC 2 cut(s) 105, 662
BsiHKCI CYCGRG 2 cut(s) 328, 684
BsiSI CCGG 6 cut(s) 72, 106, 283, 341, 381, 620
BslFI GGGAC 2 cut(s) 299, 1254
BslI CCNNNNNNNGG 2 cut(s) 181, 298
BsmAI GTCTC 5 cut(s) 138, 206, 249, 318, 410
BsmFI GGGAC 2 cut(s) 299, 1254
BsnI GGCC 2 cut(s) 801, 988
Bso31I GGTCTC 3 cut(s) 138, 206, 318
BsoBI CYCGRG 2 cut(s) 328, 684
Bsp119I TTCGAA 1 cut(s) 867
Bsp1286I GDGCHC 2 cut(s) 105, 662
Bsp13I TCCGGA 1 cut(s) 619
Bsp143I GATC 4 cut(s) 7, 63, 634, 728
Bsp1720I GCTNAGC 1 cut(s) 661
Bsp19I CCATGG 2 cut(s) 841, 1049
BspACI CCGC 8 cut(s) 49, 81, 92, 109, 299, 890, 1010, 1014
BspANI GGCC 2 cut(s) 801, 988
BspCNI CTCAG 7 cut(s) 261, 391, 412, 674, 742, 838, 1292
BspEI TCCGGA 1 cut(s) 619
BspHI TCATGA 1 cut(s) 1210
BspLI GGNNCC 7 cut(s) 70, 76, 160, 281, 624, 1023, 1047
BspPI GGATC 1 cut(s) 2
BspT104I TTCGAA 1 cut(s) 867
BspT107I GGYRCC 4 cut(s) 68, 74, 158, 1021
BspTNI GGTCTC 3 cut(s) 138, 206, 318
BsrDI GCAATG 2 cut(s) 39, 904
BsrFI RCCGGY 2 cut(s) 71, 380
BsrI ACTGG 1 cut(s) 241
BssAI RCCGGY 2 cut(s) 71, 380
BssECI CCNNGG 5 cut(s) 162, 565, 841, 1017, 1049
BssMI GATC 4 cut(s) 7, 63, 634, 728
BssNI GRCGYC 1 cut(s) 69
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 3 cut(s) 841, 1017, 1049
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 163, 567
Bst4CI ACNGT 4 cut(s) 961, 980, 993, 1026
Bst6I CTCTTC 2 cut(s) 495, 1177
BstACI GRCGYC 1 cut(s) 69
BstBAI YACGTR 2 cut(s) 55, 98
BstBI TTCGAA 1 cut(s) 867
BstC8I GCNNGC 5 cut(s) 79, 382, 1014, 1251, 1383
BstDEI CTNAG 8 cut(s) 248, 399, 420, 543, 661, 750, 825, 1279
BstDSI CCRYGG 2 cut(s) 841, 1049
BstF5I GGATG 4 cut(s) 465, 976, 1159, 1366
BstH2I RGCGCY 1 cut(s) 72
BstHHI GCGC 1 cut(s) 71
BstKTI GATC 4 cut(s) 10, 66, 637, 731
BstMAI GTCTC 5 cut(s) 138, 206, 249, 318, 410
BstMBI GATC 4 cut(s) 7, 63, 634, 728
BstMWI GCNNNNNNNGC 1 cut(s) 701
BstNI CCWGG 2 cut(s) 163, 567
BstNSI RCATGY 2 cut(s) 814, 1004
BstPAI GACNNNNGTC 1 cut(s) 1406
BstSCI CCNGG 4 cut(s) 161, 282, 340, 565
BstV1I GCAGC 1 cut(s) 1265
BstV2I GAAGAC 3 cut(s) 318, 997, 1218
BstXI CCANNNNNNTGG 3 cut(s) 85, 155, 848
BsuRI GGCC 2 cut(s) 801, 988
BtgI CCRYGG 2 cut(s) 841, 1049
BtgZI GCGATG 1 cut(s) 501
BtsCI GGATG 4 cut(s) 465, 976, 1159, 1366
BtsI GCAGTG 1 cut(s) 66
BtsIMutI CAGTG 3 cut(s) 66, 747, 989
Cac8I GCNNGC 5 cut(s) 79, 382, 1014, 1251, 1383
CciI TCATGA 1 cut(s) 1210
CfoI GCGC 1 cut(s) 71
Cfr10I RCCGGY 2 cut(s) 71, 380
Cfr13I GGNCC 1 cut(s) 986
CseI GACGC 1 cut(s) 112
Csp6I GTAC 3 cut(s) 364, 916, 1376
CspCI CAANNNNNGTGG 4 cut(s) 1073, 1108, 1337, 1372
CviAII CATG 7 cut(s) 579, 803, 811, 842, 1001, 1050, 1211
CviQI GTAC 3 cut(s) 364, 916, 1376
DdeI CTNAG 8 cut(s) 248, 399, 420, 543, 661, 750, 825, 1279
DinI GGCGCC 1 cut(s) 70
DpnI GATC 4 cut(s) 9, 65, 636, 730
DpnII GATC 4 cut(s) 7, 63, 634, 728
DraIII CACNNNGTG 1 cut(s) 1262
EaeI YGGCCR 1 cut(s) 799
Eam1104I CTCTTC 2 cut(s) 495, 1177
EarI CTCTTC 2 cut(s) 495, 1177
Ecl136II GAGCTC 2 cut(s) 103, 660
Eco130I CCWWGG 3 cut(s) 841, 1017, 1049
Eco24I GRGCYC 2 cut(s) 105, 662
Eco31I GGTCTC 3 cut(s) 138, 206, 318
Eco32I GATATC 1 cut(s) 679
Eco53kI GAGCTC 2 cut(s) 103, 660
Eco57I CTGAAG 1 cut(s) 1381
Eco72I CACGTG 1 cut(s) 98
Eco88I CYCGRG 2 cut(s) 328, 684
EcoICRI GAGCTC 2 cut(s) 103, 660
EcoRII CCWGG 2 cut(s) 161, 565
EcoRV GATATC 1 cut(s) 679
EcoT14I CCWWGG 3 cut(s) 841, 1017, 1049
EcoT22I ATGCAT 1 cut(s) 39
EcoT38I GRGCYC 2 cut(s) 105, 662
EgeI GGCGCC 1 cut(s) 70
EheI GGCGCC 1 cut(s) 70
ErhI CCWWGG 3 cut(s) 841, 1017, 1049
FaeI CATG 7 cut(s) 582, 806, 814, 845, 1004, 1053, 1214
FalI AAGNNNNNCTT 2 cut(s) 989, 1021
FaqI GGGAC 2 cut(s) 299, 1254
FatI CATG 7 cut(s) 578, 802, 810, 841, 1000, 1049, 1210
FauI CCCGC 4 cut(s) 56, 102, 1017, 1021
FauNDI CATATG 1 cut(s) 1299
FblI GTMKAC 1 cut(s) 168
Fnu4HI GCNGC 2 cut(s) 93, 1254
FokI GGATG 4 cut(s) 472, 983, 1166, 1373
FriOI GRGCYC 2 cut(s) 105, 662
Fsp4HI GCNGC 2 cut(s) 93, 1254
FspBI CTAG 2 cut(s) 12, 1197
GlaI GCGC 1 cut(s) 70
GluI GCNGC 2 cut(s) 93, 1254
GsuI CTGGAG 2 cut(s) 214, 717
HaeII RGCGCY 1 cut(s) 72
HaeIII GGCC 2 cut(s) 801, 988
HapII CCGG 6 cut(s) 72, 106, 283, 341, 381, 620
HgaI GACGC 1 cut(s) 112
HhaI GCGC 1 cut(s) 71
Hin1I GRCGYC 1 cut(s) 69
Hin1II CATG 7 cut(s) 582, 806, 814, 845, 1004, 1053, 1214
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HindIII AAGCTT 2 cut(s) 1182, 1383
HinfI GANTC 4 cut(s) 185, 1060, 1391, 1407
HpaII CCGG 6 cut(s) 72, 106, 283, 341, 381, 620
HphI GGTGA 2 cut(s) 418, 1244
Hpy166II GTNNAC 5 cut(s) 169, 226, 715, 964, 1421
Hpy188I TCNGA 7 cut(s) 28, 190, 400, 742, 828, 1282, 1334
Hpy188III TCNNGA 9 cut(s) 250, 620, 632, 684, 726, 938, 1211, 1349, 1399
Hpy8I GTNNAC 5 cut(s) 169, 226, 715, 964, 1421
Hpy99I CGWCG 2 cut(s) 128, 1030
HpyAV CCTTC 6 cut(s) 107, 311, 327, 1136, 1140, 1405
HpyCH4III ACNGT 4 cut(s) 961, 980, 993, 1026
HpyCH4IV ACGT 2 cut(s) 54, 97
HpyCH4V TGCA 8 cut(s) 32, 37, 557, 704, 770, 909, 1253, 1381
HpyF10VI GCNNNNNNNGC 1 cut(s) 701
HpyF3I CTNAG 8 cut(s) 248, 399, 420, 543, 661, 750, 825, 1279
HpySE526I ACGT 2 cut(s) 54, 97
Hsp92I GRCGYC 1 cut(s) 69
Hsp92II CATG 7 cut(s) 582, 806, 814, 845, 1004, 1053, 1214
HspAI GCGC 1 cut(s) 69
KasI GGCGCC 1 cut(s) 68
Kpn2I TCCGGA 1 cut(s) 619
KroI GCCGGC 1 cut(s) 380
KroNI GCCGGC 1 cut(s) 382
Kzo9I GATC 4 cut(s) 7, 63, 634, 728
LmnI GCTCC 3 cut(s) 108, 622, 657
Lsp1109I GCAGC 1 cut(s) 1265
LweI GCATC 2 cut(s) 19, 502
MaeI CTAG 2 cut(s) 12, 1197
MaeII ACGT 2 cut(s) 54, 97
MaeIII GTNAC 3 cut(s) 116, 344, 955
MalI GATC 4 cut(s) 9, 65, 636, 730
MboI GATC 4 cut(s) 7, 63, 634, 728
MboII GAAGA 9 cut(s) 320, 323, 512, 766, 881, 997, 1164, 1218, 1295
MfeI CAATTG 1 cut(s) 195
MhlI GDGCHC 2 cut(s) 105, 662
MlsI TGGCCA 1 cut(s) 801
MluCI AATT 7 cut(s) 149, 195, 393, 594, 645, 1119, 1321
MluNI TGGCCA 1 cut(s) 801
Mly113I GGCGCC 1 cut(s) 69
MlyI GAGTC 3 cut(s) 194, 1400, 1416
MmeI TCCRAC 2 cut(s) 213, 1357
Mox20I TGGCCA 1 cut(s) 801
Mph1103I ATGCAT 1 cut(s) 39
MreI CGCCGGCG 1 cut(s) 380
MroI TCCGGA 1 cut(s) 619
MroNI GCCGGC 1 cut(s) 380
MroXI GAANNNNTTC 1 cut(s) 374
MscI TGGCCA 1 cut(s) 801
MseI TTAA 2 cut(s) 465, 831
MslI CAYNNNNRTG 3 cut(s) 27, 846, 1209
Msp20I TGGCCA 1 cut(s) 801
MspA1I CMGCKG 2 cut(s) 81, 1426
MspI CCGG 6 cut(s) 72, 106, 283, 341, 381, 620
MspR9I CCNGG 4 cut(s) 163, 284, 342, 567
MunI CAATTG 1 cut(s) 195
MvaI CCWGG 2 cut(s) 163, 567
MwoI GCNNNNNNNGC 1 cut(s) 701
NaeI GCCGGC 1 cut(s) 382
NarI GGCGCC 1 cut(s) 69
NciI CCSGG 2 cut(s) 284, 342
NcoI CCATGG 2 cut(s) 841, 1049
NdeI CATATG 1 cut(s) 1299
NdeII GATC 4 cut(s) 7, 63, 634, 728
NgoMIV GCCGGC 1 cut(s) 380
NlaIII CATG 7 cut(s) 582, 806, 814, 845, 1004, 1053, 1214
NlaIV GGNNCC 7 cut(s) 70, 76, 160, 281, 624, 1023, 1047
NmuCI GTSAC 2 cut(s) 116, 344
NsiI ATGCAT 1 cut(s) 39
NspI RCATGY 2 cut(s) 814, 1004
NspV TTCGAA 1 cut(s) 867
PaeR7I CTCGAG 1 cut(s) 684
PagI TCATGA 1 cut(s) 1210
PciI ACATGT 1 cut(s) 810
PdiI GCCGGC 1 cut(s) 382
PdmI GAANNNNTTC 1 cut(s) 374
PfeI GAWTC 1 cut(s) 1060
PfoI TCCNGGA 1 cut(s) 282
PkrI GCNGC 2 cut(s) 94, 1255
PleI GAGTC 3 cut(s) 193, 1399, 1415
PluTI GGCGCC 1 cut(s) 72
PmaCI CACGTG 1 cut(s) 98
PmlI CACGTG 1 cut(s) 98
PpsI GAGTC 3 cut(s) 193, 1399, 1415
Ppu21I YACGTR 2 cut(s) 55, 98
PscI ACATGT 1 cut(s) 810
PshAI GACNNNNGTC 1 cut(s) 1406
Psp124BI GAGCTC 2 cut(s) 105, 662
Psp6I CCWGG 2 cut(s) 161, 565
PspCI CACGTG 1 cut(s) 98
PspGI CCWGG 2 cut(s) 161, 565
PspN4I GGNNCC 7 cut(s) 70, 76, 160, 281, 624, 1023, 1047
PspPI GGNCC 1 cut(s) 986
PsrI GAACNNNNNNTAC 2 cut(s) 1287, 1319
PvuII CAGCTG 1 cut(s) 1426
RsaI GTAC 3 cut(s) 365, 917, 1377
RsaNI GTAC 3 cut(s) 364, 916, 1376
RseI CAYNNNNRTG 3 cut(s) 27, 846, 1209
SacI GAGCTC 2 cut(s) 105, 662
SaqAI TTAA 2 cut(s) 465, 831
SatI GCNGC 2 cut(s) 93, 1254
Sau3AI GATC 4 cut(s) 7, 63, 634, 728
Sau96I GGNCC 1 cut(s) 986
SchI GAGTC 3 cut(s) 194, 1400, 1416
ScrFI CCNGG 4 cut(s) 163, 284, 342, 567
SduI GDGCHC 2 cut(s) 105, 662
SfaNI GCATC 2 cut(s) 19, 502
SfoI GGCGCC 1 cut(s) 70
Sfr274I CTCGAG 1 cut(s) 684
SfuI TTCGAA 1 cut(s) 867
SgrAI CRCCGGYG 2 cut(s) 71, 380
SlaI CTCGAG 1 cut(s) 684
SmiMI CAYNNNNRTG 3 cut(s) 27, 846, 1209
SmlI CTYRAG 1 cut(s) 684
SmoI CTYRAG 1 cut(s) 684
Sse9I AATT 7 cut(s) 149, 195, 393, 594, 645, 1119, 1321
SsiI CCGC 8 cut(s) 49, 81, 92, 109, 299, 890, 1010, 1014
SspDI GGCGCC 1 cut(s) 68
SspI AATATT 1 cut(s) 1238
SspMI CTAG 2 cut(s) 12, 1197
SstI GAGCTC 2 cut(s) 105, 662
StyD4I CCNGG 4 cut(s) 161, 282, 340, 565
StyI CCWWGG 3 cut(s) 841, 1017, 1049
TaaI ACNGT 4 cut(s) 961, 980, 993, 1026
TaiI ACGT 2 cut(s) 57, 100
TaqI TCGA 6 cut(s) 613, 631, 685, 727, 867, 1112
TasI AATT 7 cut(s) 149, 195, 393, 594, 645, 1119, 1321
TatI WGTACW 1 cut(s) 363
TauI GCSGC 1 cut(s) 95
TfiI GAWTC 1 cut(s) 1060
Tru1I TTAA 2 cut(s) 465, 831
Tru9I TTAA 2 cut(s) 465, 831
TscAI CASTG 3 cut(s) 66, 754, 996
TseFI GTSAC 2 cut(s) 116, 344
TseI GCWGC 1 cut(s) 1253
Tsp45I GTSAC 2 cut(s) 116, 344
TspDTI ATGAA 2 cut(s) 711, 893
TspRI CASTG 3 cut(s) 66, 754, 996
XapI RAATTY 2 cut(s) 393, 594
XceI RCATGY 2 cut(s) 814, 1004
XcmI CCANNNNNNNNNTGG 2 cut(s) 85, 271
XhoI CTCGAG 1 cut(s) 684
XmiI GTMKAC 1 cut(s) 168
XmnI GAANNNNTTC 1 cut(s) 374
XspI CTAG 2 cut(s) 12, 1197
Zsp2I ATGCAT 1 cut(s) 39
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.