Rorug07G0071400

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000323
Physical Location & Seq
Forward (+)
5454667 .. 5459785
5119 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0071400.1

Sequence Viewer

Length: 2016 bp
ATGACGAATCAAGCAGGGTCGTATTCGCAGCCGGAAGGAGGAGATGTTCTGTATCCGGAGCTATGGAAGGCCTGTGCGGGCCCACTCGTTGAAGTCCCTCGCCATAAGGAGAGAGTCTACTACTTTCCACAAGGGCACATGGAGCAATTAGAGGCATCAACAACAACAAATCCGGAAGTGAATCAGGGGATTCCGAGGTTTAATCTTCCCTCGAAGATTCTCTGTCGCGTCATGCACGTTCAGCTACTGGCTGAACAAGAAACAGATGAGGTTTATGCGCAAATTACTTTAATTCCTGAAGCAAATCAAACCACCAAACCTACTAGTCCTGATGAGTGTCCTTCTGAACCTGAAAGACCAAAGGTTTACCCATTCTGCAAGGTTCTTACTGCATCCGATACGAGTACCCACGGTGGGTTTTCTGTTCTACGCAAACATGCTACTGAATGCCTTCCTCCACTGGACAAGACTCAAGCAACCCCAACTCAGGAATTGGTTGCCAAAGATCTTCATGGTTATGAGTGGCGATTCAAGCACATTTTCAGAGGTTCACCACGGAGACACTTGCTTACAACAGGATGGAGTACTTTTGTTACTTCTAAGAGGTTAAGTGCCGGGGATTCCTTTGTATTTCTCAGAGGCGAAAACGGGGACTTACGTGTTGGAATTAGGCGTCTTGCTCGTCAACAGAGCAGCATGCCATCATCTGTGATTTCAAGTCAAAGCATGCATGTAGGGGTGCTTGCTACTGCATCACACGCTGTTGCAACCCAAACACTCTTTGTAGTGTATTATAAGCCAAGGACGAGTCAGTTCATTATTAGTTTGAATAAGTATTTGGAGGCTGTTAACAATAAGTTCTCGGTTGGAATGAGATTCAAGATGAGGTTTGAGGGGGAGGACGCTCCAGAGAGAAGGTTTTCAGGCACTATAATTGGTCTTGAGGATATATCTCTTCATTGGGCAGATTCAGAATGGCGATCCCTGAAAGTTCAATGGGATGAGTCTGCATCCATTCCCAGACCTGACAGGGTCTCGCCCTGGGAGATAGAACCTTATGTGGCTTCCATACCTGCGAGCCTTTCTCAATCCACTGTTTTGAAGAACAAAAGGCCTCGGCTACTCCCTGAAATCCCAGCTCCTGATACCGCGAGTTCAATAACGTGGCATGATGTGACACAATTGAGTGGTGCTGCTGAAGGCCAGAGAAGTGAAAATCATGTTTCTTTGAATCATCAGCAGGCAGACATTATCAGCATTAGCAGTTGTATCTCGAGGACTAAGACTGATGGGGGCTGGCTATCTTCACCTACGGTGGAGGATAGTAAAAGTGGTCCTGCTTGGCCACTTTTCTCTGGATATTCAACTCCAACTTCATCAAAGCCTAAAAATGACTTGATGCTGGACCATGTTGAAAAGAGGAAGAAAACTGAGACAGGTGCTAGTTGCCTAATTTTCGGTGTAGATTTTAGCAGTCATCTTAACAGCTCCCATTCAGTGGCGAAGCCACCCCCACAACCAATTATAGCATCTACTGGAGCCACTGAAGGACAAGTTAGTATCTCAGTGGAAGCCGAGTCTGACCAGAAATCTGACCTTTCGAAGGCTTCTAAAGAAAGCAAAGCTCAGTTTCAAGTATCACCGAAAGAGACACTGAGCAAGCAGAGTAGCTCTGCATCCACTAGGAGTCGCGTCAAGGTTCAAATGCAGGGAATAGCTGTTGGTCGAGCAGTGGACTTGACAATGCTGGAAGGGTATGATCAACTTATAGTTGAACTGGAGGAGATGTTTGATATCAAGGGACAGATCGGCCCACGTAACAAGTGGGAAATTGTGTTCACTGATGATGAAGGAGATATGATGCTTGCCGGTGACGACCCGTGGTTGGAATTCTGTAACATGGTGAGAAGAATCTTTATATGTTCAAGTCAGGACGTGAAGAAAATTAGTGCAGGGAGAAAACGTCTAAGTATGTCTTCACTAGAAGTTGAAGGGACAGTAACAAGTTCTGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

671

Amino Acids

74.41

Weight (kDa)

6.41

Isoelectric Point (pI)

50.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
B3 PF02362 125 - 225 3.6e-23 B3 DNA binding domain
BRWD_AD PF25313 257 - 353 9.3e-09 BRWD/PHIP ancillary domain-like domain
ARF_AD PF06507 272 - 353 1.4e-35 Auxin response factor ancillary domain
AUX_IAA PF02309 549 - 598 1.1e-07 AUX/IAA family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 795
Acc16I TGCGCA 1 cut(s) 279
Acc36I ACCTGC 1 cut(s) 1081
AccB7I CCANNNNNTGG 1 cut(s) 1498
AccI GTMKAC 1 cut(s) 117
AccII CGCG 3 cut(s) 228, 1151, 1692
AccIII TCCGGA 2 cut(s) 55, 172
AciI CCGC 2 cut(s) 77, 1149
AclWI GGATC 1 cut(s) 975
AcoI YGGCCR 1 cut(s) 1343
AcsI RAATTY 1 cut(s) 1889
AcuI CTGAAG 3 cut(s) 318, 1218, 1566
AcyI GRCGYC 1 cut(s) 673
AfaI GTAC 2 cut(s) 406, 586
AfiI CCNNNNNNNGG 6 cut(s) 38, 414, 487, 1498, 1603, 1885
AflIII ACRYGT 1 cut(s) 658
AhlI ACTAGT 1 cut(s) 323
AjiI CACGTC 1 cut(s) 1936
AjnI CCWGG 1 cut(s) 1040
AjuI GAANNNNNNNTTGG 2 cut(s) 821, 853
AloI GAACNNNNNNTCC 4 cut(s) 30, 62, 1820, 1852
AluBI AGCT 7 cut(s) 61, 244, 1139, 1488, 1625, 1671, 1718
AluI AGCT 7 cut(s) 61, 244, 1139, 1488, 1625, 1671, 1718
Alw26I GTCTC 4 cut(s) 553, 1039, 1427, 1643
AlwI GGATC 1 cut(s) 975
AlwNI CAGNNNCTG 2 cut(s) 247, 1142
Ama87I CYCGRG 1 cut(s) 1273
Aor13HI TCCGGA 2 cut(s) 55, 172
AoxI GGCC 6 cut(s) 69, 79, 1112, 1201, 1343, 1810
ApaI GGGCCC 1 cut(s) 83
ApeKI GCWGC 3 cut(s) 28, 693, 1193
ApoI RAATTY 1 cut(s) 1889
Asp700I GAANNNNTTC 2 cut(s) 450, 919
AspLEI GCGC 1 cut(s) 280
AspS9I GGNCC 5 cut(s) 79, 80, 1334, 1405, 1811
AsuC2I CCSGG 1 cut(s) 616
AsuHPI GGTGA 5 cut(s) 543, 1299, 1632, 1883, 1915
AsuII TTCGAA 1 cut(s) 1601
AvaI CYCGRG 1 cut(s) 1273
AvaII GGWCC 2 cut(s) 1334, 1405
BaeGI GKGCMC 2 cut(s) 83, 138
BalI TGGCCA 1 cut(s) 1345
BanII GRGCYC 1 cut(s) 83
BbsI GAAGAC 1 cut(s) 1968
BbvI GCAGC 3 cut(s) 40, 705, 1180
BccI CCATC 3 cut(s) 573, 709, 1283
BciT130I CCWGG 1 cut(s) 1042
BciVI GTATCC 1 cut(s) 63
BclI TGATCA 1 cut(s) 1759
BcnI CCSGG 1 cut(s) 616
BcoDI GTCTC 4 cut(s) 553, 1039, 1427, 1643
BcuI ACTAGT 1 cut(s) 323
BfaI CTAG 4 cut(s) 324, 1443, 1683, 1982
BfuAI ACCTGC 1 cut(s) 1081
BfuI GTATCC 1 cut(s) 63
BglII AGATCT 1 cut(s) 505
BisI GCNGC 3 cut(s) 29, 694, 1194
BlsI GCNGC 3 cut(s) 30, 695, 1195
BmcAI AGTACT 1 cut(s) 586
Bme1390I CCNGG 2 cut(s) 616, 1042
Bme18I GGWCC 2 cut(s) 1334, 1405
BmeT110I CYCGRG 1 cut(s) 1273
BmgBI CACGTC 1 cut(s) 1936
BmgT120I GGNCC 5 cut(s) 79, 80, 1334, 1405, 1811
BmiI GGNNCC 2 cut(s) 81, 1540
BmrFI CCNGG 2 cut(s) 616, 1042
BmsI GCATC 8 cut(s) 164, 401, 761, 1019, 1389, 1538, 1685, 1851
BpiI GAAGAC 1 cut(s) 1968
BplI GAGNNNNNCTC 2 cut(s) 1069, 1101
BpmI CTGGAG 3 cut(s) 891, 1557, 1799
Bpu14I TTCGAA 1 cut(s) 1601
BpuEI CTTGAG 2 cut(s) 456, 962
BpuMI CCSGG 1 cut(s) 616
BsaAI YACGTR 2 cut(s) 659, 1817
BsaHI GRCGYC 1 cut(s) 673
BsaI GGTCTC 1 cut(s) 1039
BsaJI CCNNGG 9 cut(s) 194, 409, 554, 615, 800, 1040, 1041, 1115, 1880
BsaWI WCCGGW 2 cut(s) 55, 172
BsaXI ACNNNNNCTCC 6 cut(s) 30, 60, 1772, 1802, 1948, 1978
Bsc4I CCNNNNNNNGG 6 cut(s) 38, 414, 487, 1498, 1603, 1885
Bse118I RCCGGY 1 cut(s) 1868
Bse1I ACTGG 4 cut(s) 252, 465, 1540, 1782
BseAI TCCGGA 2 cut(s) 55, 172
BseBI CCWGG 1 cut(s) 1042
BseDI CCNNGG 9 cut(s) 194, 409, 554, 615, 800, 1040, 1041, 1115, 1880
BseGI GGATG 5 cut(s) 392, 584, 1006, 1010, 1676
BseLI CCNNNNNNNGG 6 cut(s) 38, 414, 487, 1498, 1603, 1885
BseMII CTCAG 6 cut(s) 500, 649, 1422, 1578, 1640, 1646
BseNI ACTGG 4 cut(s) 252, 465, 1540, 1782
BseRI GAGGAG 2 cut(s) 54, 1796
BseSI GKGCMC 2 cut(s) 83, 138
BseXI GCAGC 3 cut(s) 40, 705, 1180
BseYI CCCAGC 1 cut(s) 1135
BsgI GTGCAG 1 cut(s) 1971
Bsh1236I CGCG 3 cut(s) 228, 1151, 1692
BshFI GGCC 6 cut(s) 71, 81, 1114, 1203, 1345, 1812
BsiHKCI CYCGRG 1 cut(s) 1273
BsiSI CCGG 5 cut(s) 32, 56, 173, 615, 1869
BslFI GGGAC 4 cut(s) 80, 665, 1815, 2008
BslI CCNNNNNNNGG 6 cut(s) 38, 414, 487, 1498, 1603, 1885
BsmAI GTCTC 4 cut(s) 553, 1039, 1427, 1643
BsmFI GGGAC 4 cut(s) 80, 665, 1815, 2008
BsmI GAATGC 1 cut(s) 452
BsnI GGCC 6 cut(s) 71, 81, 1114, 1203, 1345, 1812
Bso31I GGTCTC 1 cut(s) 1039
BsoBI CYCGRG 1 cut(s) 1273
Bsp119I TTCGAA 1 cut(s) 1601
Bsp120I GGGCCC 1 cut(s) 79
Bsp1286I GDGCHC 2 cut(s) 83, 138
Bsp13I TCCGGA 2 cut(s) 55, 172
Bsp143I GATC 4 cut(s) 505, 980, 1759, 1806
BspACI CCGC 2 cut(s) 77, 1149
BspANI GGCC 6 cut(s) 71, 81, 1114, 1203, 1345, 1812
BspCNI CTCAG 6 cut(s) 499, 648, 1423, 1577, 1639, 1647
BspEI TCCGGA 2 cut(s) 55, 172
BspFNI CGCG 3 cut(s) 228, 1151, 1692
BspLI GGNNCC 2 cut(s) 81, 1540
BspMI ACCTGC 1 cut(s) 1081
BspPI GGATC 1 cut(s) 975
BspT104I TTCGAA 1 cut(s) 1601
BspTNI GGTCTC 1 cut(s) 1039
BsrFI RCCGGY 1 cut(s) 1868
BsrI ACTGG 4 cut(s) 252, 465, 1540, 1782
BssAI RCCGGY 1 cut(s) 1868
BssECI CCNNGG 9 cut(s) 194, 409, 554, 615, 800, 1040, 1041, 1115, 1880
BssMI GATC 4 cut(s) 505, 980, 1759, 1806
BssNI GRCGYC 1 cut(s) 673
BssT1I CCWWGG 1 cut(s) 800
Bst2UI CCWGG 1 cut(s) 1042
Bst4CI ACNGT 4 cut(s) 413, 1096, 1315, 1999
Bst6I CTCTTC 1 cut(s) 960
BstACI GRCGYC 1 cut(s) 673
BstBAI YACGTR 2 cut(s) 659, 1817
BstBI TTCGAA 1 cut(s) 1601
BstC8I GCNNGC 9 cut(s) 79, 698, 728, 744, 1078, 1242, 1298, 1661, 1866
BstDEI CTNAG 9 cut(s) 486, 600, 635, 1281, 1431, 1564, 1626, 1655, 1967
BstDSI CCRYGG 3 cut(s) 409, 554, 1880
BstENI CCTNNNNNAGG 1 cut(s) 1601
BstF5I GGATG 5 cut(s) 392, 584, 1006, 1010, 1676
BstFNI CGCG 3 cut(s) 228, 1151, 1692
BstHHI GCGC 1 cut(s) 280
BstKTI GATC 4 cut(s) 508, 983, 1762, 1809
BstMAI GTCTC 4 cut(s) 553, 1039, 1427, 1643
BstMBI GATC 4 cut(s) 505, 980, 1759, 1806
BstMWI GCNNNNNNNGC 4 cut(s) 142, 241, 532, 758
BstNI CCWGG 1 cut(s) 1042
BstNSI RCATGY 4 cut(s) 440, 700, 730, 734
BstSCI CCNGG 2 cut(s) 614, 1040
BstSLI GKGCMC 2 cut(s) 83, 138
BstUI CGCG 3 cut(s) 228, 1151, 1692
BstV1I GCAGC 3 cut(s) 40, 705, 1180
BstV2I GAAGAC 1 cut(s) 1968
BstX2I RGATCY 1 cut(s) 505
BstYI RGATCY 1 cut(s) 505
BsuI GTATCC 1 cut(s) 63
BsuRI GGCC 6 cut(s) 71, 81, 1114, 1203, 1345, 1812
BtgI CCRYGG 3 cut(s) 409, 554, 1880
BtrI CACGTC 1 cut(s) 1936
BtsCI GGATG 5 cut(s) 392, 584, 1006, 1010, 1676
BtsI GCAGTG 1 cut(s) 1737
BtsIMutI CAGTG 8 cut(s) 458, 1092, 1503, 1542, 1572, 1652, 1737, 1839
BveI ACCTGC 1 cut(s) 1081
Cac8I GCNNGC 9 cut(s) 79, 698, 728, 744, 1078, 1242, 1298, 1661, 1866
CaiI CAGNNNCTG 2 cut(s) 247, 1142
CfoI GCGC 1 cut(s) 280
Cfr10I RCCGGY 1 cut(s) 1868
Cfr13I GGNCC 5 cut(s) 79, 80, 1334, 1405, 1811
CseI GACGC 4 cut(s) 217, 662, 911, 1681
Csp6I GTAC 2 cut(s) 405, 585
CviQI GTAC 2 cut(s) 405, 585
DdeI CTNAG 9 cut(s) 486, 600, 635, 1281, 1431, 1564, 1626, 1655, 1967
DpnI GATC 4 cut(s) 507, 982, 1761, 1808
DpnII GATC 4 cut(s) 505, 980, 1759, 1806
EaeI YGGCCR 1 cut(s) 1343
Eam1104I CTCTTC 1 cut(s) 960
EarI CTCTTC 1 cut(s) 960
Eco130I CCWWGG 1 cut(s) 800
Eco147I AGGCCT 2 cut(s) 71, 1114
Eco24I GRGCYC 1 cut(s) 83
Eco31I GGTCTC 1 cut(s) 1039
Eco32I GATATC 1 cut(s) 1795
Eco47I GGWCC 2 cut(s) 1334, 1405
Eco57I CTGAAG 3 cut(s) 318, 1218, 1566
Eco88I CYCGRG 1 cut(s) 1273
EcoNI CCTNNNNNAGG 1 cut(s) 1601
EcoRI GAATTC 1 cut(s) 1889
EcoRII CCWGG 1 cut(s) 1040
EcoRV GATATC 1 cut(s) 1795
EcoT14I CCWWGG 1 cut(s) 800
EcoT22I ATGCAT 1 cut(s) 732
EcoT38I GRGCYC 1 cut(s) 83
ErhI CCWWGG 1 cut(s) 800
FalI AAGNNNNNCTT 2 cut(s) 1960, 1992
FaqI GGGAC 4 cut(s) 80, 665, 1815, 2008
FauI CCCGC 1 cut(s) 70
FbaI TGATCA 1 cut(s) 1759
FblI GTMKAC 1 cut(s) 117
Fnu4HI GCNGC 3 cut(s) 29, 694, 1194
FokI GGATG 5 cut(s) 379, 591, 997, 1013, 1663
FriOI GRGCYC 1 cut(s) 83
Fsp4HI GCNGC 3 cut(s) 29, 694, 1194
FspBI CTAG 4 cut(s) 324, 1443, 1683, 1982
FspI TGCGCA 1 cut(s) 279
GlaI GCGC 1 cut(s) 279
GluI GCNGC 3 cut(s) 29, 694, 1194
GsaI CCCAGC 1 cut(s) 1139
GsuI CTGGAG 3 cut(s) 891, 1557, 1799
HaeIII GGCC 6 cut(s) 71, 81, 1114, 1203, 1345, 1812
HapII CCGG 5 cut(s) 32, 56, 173, 615, 1869
HgaI GACGC 4 cut(s) 217, 662, 911, 1681
HhaI GCGC 1 cut(s) 280
Hin1I GRCGYC 1 cut(s) 673
Hin6I GCGC 1 cut(s) 278
HinP1I GCGC 1 cut(s) 278
HincII GTYRAC 2 cut(s) 686, 850
HindII GTYRAC 2 cut(s) 686, 850
HpaI GTTAAC 1 cut(s) 850
HpaII CCGG 5 cut(s) 32, 56, 173, 615, 1869
HphI GGTGA 5 cut(s) 543, 1299, 1632, 1883, 1915
Hpy166II GTNNAC 7 cut(s) 118, 367, 551, 686, 850, 1735, 1839
Hpy188I TCNGA 9 cut(s) 195, 346, 397, 545, 638, 973, 1582, 1594, 2011
Hpy8I GTNNAC 7 cut(s) 118, 367, 551, 686, 850, 1735, 1839
HpyCH4III ACNGT 4 cut(s) 413, 1096, 1315, 1999
HpyCH4IV ACGT 6 cut(s) 237, 658, 1163, 1816, 1935, 1963
HpyF10VI GCNNNNNNNGC 4 cut(s) 142, 241, 532, 758
HpyF3I CTNAG 9 cut(s) 486, 600, 635, 1281, 1431, 1564, 1626, 1655, 1967
HpySE526I ACGT 6 cut(s) 237, 658, 1163, 1816, 1935, 1963
Hsp92I GRCGYC 1 cut(s) 673
HspAI GCGC 1 cut(s) 278
Kpn2I TCCGGA 2 cut(s) 55, 172
Ksp22I TGATCA 1 cut(s) 1759
KspAI GTTAAC 1 cut(s) 850
Kzo9I GATC 4 cut(s) 505, 980, 1759, 1806
LmnI GCTCC 6 cut(s) 58, 142, 910, 1144, 1493, 1538
Lsp1109I GCAGC 3 cut(s) 40, 705, 1180
LweI GCATC 8 cut(s) 164, 401, 761, 1019, 1389, 1538, 1685, 1851
MaeI CTAG 4 cut(s) 324, 1443, 1683, 1982
MaeII ACGT 6 cut(s) 237, 658, 1163, 1816, 1935, 1963
MaeIII GTNAC 6 cut(s) 592, 1174, 1817, 1871, 1895, 1999
MalI GATC 4 cut(s) 507, 982, 1761, 1808
MboI GATC 4 cut(s) 505, 980, 1759, 1806
MfeI CAATTG 1 cut(s) 1181
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 2 cut(s) 83, 138
MlsI TGGCCA 1 cut(s) 1345
MluNI TGGCCA 1 cut(s) 1345
MlyI GAGTC 6 cut(s) 123, 463, 817, 1013, 1586, 1696
MmeI TCCRAC 4 cut(s) 643, 847, 1394, 1866
Mox20I TGGCCA 1 cut(s) 1345
Mph1103I ATGCAT 1 cut(s) 732
MroI TCCGGA 2 cut(s) 55, 172
MroXI GAANNNNTTC 2 cut(s) 450, 919
MscI TGGCCA 1 cut(s) 1345
MseI TTAA 6 cut(s) 201, 290, 608, 849, 1482, 2014
MslI CAYNNNNRTG 1 cut(s) 516
Msp20I TGGCCA 1 cut(s) 1345
MspI CCGG 5 cut(s) 32, 56, 173, 615, 1869
MspR9I CCNGG 2 cut(s) 616, 1042
MunI CAATTG 1 cut(s) 1181
Mva1269I GAATGC 1 cut(s) 452
MvaI CCWGG 1 cut(s) 1042
MvnI CGCG 3 cut(s) 228, 1151, 1692
MwoI GCNNNNNNNGC 4 cut(s) 142, 241, 532, 758
NciI CCSGG 1 cut(s) 616
NdeII GATC 4 cut(s) 505, 980, 1759, 1806
NlaIV GGNNCC 2 cut(s) 81, 1540
NmeAIII GCCGAG 2 cut(s) 1096, 1600
NmuCI GTSAC 2 cut(s) 1174, 1871
NsbI TGCGCA 1 cut(s) 279
NsiI ATGCAT 1 cut(s) 732
NspI RCATGY 4 cut(s) 440, 700, 730, 734
NspV TTCGAA 1 cut(s) 1601
PaeI GCATGC 2 cut(s) 700, 730
PaeR7I CTCGAG 1 cut(s) 1273
PasI CCCWGGG 1 cut(s) 1041
PceI AGGCCT 2 cut(s) 71, 1114
PctI GAATGC 1 cut(s) 452
PdmI GAANNNNTTC 2 cut(s) 450, 919
PflFI GACNNNGTC 1 cut(s) 1031
PflMI CCANNNNNTGG 1 cut(s) 1498
PkrI GCNGC 3 cut(s) 30, 695, 1195
PleI GAGTC 6 cut(s) 122, 463, 816, 1012, 1585, 1695
PpsI GAGTC 6 cut(s) 122, 463, 816, 1012, 1585, 1695
Ppu21I YACGTR 2 cut(s) 659, 1817
PsiI TTATAA 1 cut(s) 795
Psp6I CCWGG 1 cut(s) 1040
PspFI CCCAGC 1 cut(s) 1135
PspGI CCWGG 1 cut(s) 1040
PspN4I GGNNCC 2 cut(s) 81, 1540
PspOMI GGGCCC 1 cut(s) 79
PspPI GGNCC 5 cut(s) 79, 80, 1334, 1405, 1811
PstNI CAGNNNCTG 2 cut(s) 247, 1142
PsuI RGATCY 1 cut(s) 505
PsyI GACNNNGTC 1 cut(s) 1031
RsaI GTAC 2 cut(s) 406, 586
RsaNI GTAC 2 cut(s) 405, 585
RseI CAYNNNNRTG 1 cut(s) 516
SaqAI TTAA 6 cut(s) 201, 290, 608, 849, 1482, 2014
SatI GCNGC 3 cut(s) 29, 694, 1194
Sau3AI GATC 4 cut(s) 505, 980, 1759, 1806
Sau96I GGNCC 5 cut(s) 79, 80, 1334, 1405, 1811
ScaI AGTACT 1 cut(s) 586
SchI GAGTC 6 cut(s) 123, 463, 817, 1013, 1586, 1696
ScrFI CCNGG 2 cut(s) 616, 1042
SduI GDGCHC 2 cut(s) 83, 138
SfaNI GCATC 8 cut(s) 164, 401, 761, 1019, 1389, 1538, 1685, 1851
Sfr274I CTCGAG 1 cut(s) 1273
SfuI TTCGAA 1 cut(s) 1601
SinI GGWCC 2 cut(s) 1334, 1405
SlaI CTCGAG 1 cut(s) 1273
SmiMI CAYNNNNRTG 1 cut(s) 516
SmlI CTYRAG 3 cut(s) 471, 941, 1273
SmoI CTYRAG 3 cut(s) 471, 941, 1273
SpeI ACTAGT 1 cut(s) 323
SphI GCATGC 2 cut(s) 700, 730
SseBI AGGCCT 2 cut(s) 71, 1114
SsiI CCGC 2 cut(s) 77, 1149
SspMI CTAG 4 cut(s) 324, 1443, 1683, 1982
StuI AGGCCT 2 cut(s) 71, 1114
StyD4I CCNGG 2 cut(s) 614, 1040
StyI CCWWGG 1 cut(s) 800
TaaI ACNGT 4 cut(s) 413, 1096, 1315, 1999
TaiI ACGT 6 cut(s) 240, 661, 1166, 1819, 1938, 1966
TaqI TCGA 4 cut(s) 212, 1274, 1601, 1726
TatI WGTACW 1 cut(s) 584
Tru1I TTAA 6 cut(s) 201, 290, 608, 849, 1482, 2014
Tru9I TTAA 6 cut(s) 201, 290, 608, 849, 1482, 2014
TscAI CASTG 8 cut(s) 465, 1099, 1503, 1549, 1572, 1659, 1737, 1846
TseFI GTSAC 2 cut(s) 1174, 1871
TseI GCWGC 3 cut(s) 28, 693, 1193
Tsp45I GTSAC 2 cut(s) 1174, 1871
TspDTI ATGAA 5 cut(s) 500, 805, 947, 1365, 1863
TspGWI ACGGA 1 cut(s) 571
TspRI CASTG 8 cut(s) 465, 1099, 1503, 1549, 1572, 1659, 1737, 1846
Tth111I GACNNNGTC 1 cut(s) 1031
Van91I CCANNNNNTGG 1 cut(s) 1498
VpaK11BI GGWCC 2 cut(s) 1334, 1405
XagI CCTNNNNNAGG 1 cut(s) 1601
XapI RAATTY 1 cut(s) 1889
XceI RCATGY 4 cut(s) 440, 700, 730, 734
XcmI CCANNNNNNNNNTGG 1 cut(s) 1821
XhoI CTCGAG 1 cut(s) 1273
XmiI GTMKAC 1 cut(s) 117
XmnI GAANNNNTTC 2 cut(s) 450, 919
XspI CTAG 4 cut(s) 324, 1443, 1683, 1982
ZrmI AGTACT 1 cut(s) 586
Zsp2I ATGCAT 1 cut(s) 732
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.