Rorug07G0071100

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000323
Physical Location & Seq
Forward (+)
5425051 .. 5430187
5137 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0071100.1

Sequence Viewer

Length: 2943 bp
ATGACGGTCAGAACTCCTGGAACCCCAGCTTCAAAAATTGACAAGACACCAGTGACAACTCCAGCTTCGAAAATCGAGAGGACACCAGTGTCAACTCCAGGAGGGCCGAGAGCAAAGGAAGAGAAGATTGTTGTTACGGTGCGTTTGAGGCCTCTGAGCAAAAGGGAGCAATTGGCAAAAGACCAAGTTGCATGGGAATGCATCGATGATAACACCATTGTATCGAAACCTGTGGACCGCTCAACCCAACAGGCCTCATTTACATTTGATAAAGTTTTCGGTCCAAATAGTATAACCGACACTGTATATGAGGAAGGAGTGAAGAATGTAGCCTTGTCTTCTTTGATGGGCATCAATGCTACTATATTTGCTTATGGACAAACTAGCAGTGGGAAGACGTACACAATGCGAGGAATAACAGAGAAAGCTGTCATTGATATCTACAACCATATAATGAATACTCCAGAGAGAGATTTTAGAATAAAAATCTCCGGACTTGAAATATACAATGAGAATGTCAAGGACCTGTTAAATGCTGAATCTGGTCGTAATCTAAAGCTTCTAGATGATCCAGAGAAAGGTACTGTGGTTGAGAAACTGGTGGAGGAAACTGCAAGCAATGATCAGCACTTGAGGCACTTAATCAGCATTTGTGAAGCTCAAAGACAAGTTGGTGAAACAGCTTTAAATGATAATAGCTCACGGTCACATCAGATAATAAGGCTGACAATTGAAAGTACACTCCGTGAAAATTCAGATTGCGTGAGATCTTTTGTTGCAAGCCTGAACTTTGTAGATCTGGCTGGAAGTGAACGAGCTTCACAGACACATACAGATGGTGCTAGGCTAAGGGAAGGTTGCCATATCAACCTTAGCCTGATGACACTTACAACTGTTATCAGAAAGCTCAGTGTTGGAAAAAGAAGTGGCCATATACCCTACAGAGACTCAAAGCTCACTCGCATATTGCAGCATTCTCTTGGTGGGAATGCACGCACTGCTATCATATGTACCTTGAGTCCAGCAATGAGTCATCTTGAACAATCTCGGAATACTCTTTACTTTGCCACCAGGGCAAAGGAAGTCACAAATAATGCACGCGTGAACATGGTTGTTTCGGACAAGCAACTAGTGAAACATTTGCAGAAGGAAGTAGCTAGGCTGGAAGCAGAGCTGCGCACCCCTGCCACCCCAGATCCATCGAGTGAAAAAGATTTGAAAATTCAGCAGATGGAAATGGAAATTGAAGAATTGAAACGCCAGAGAGATATTGCTCAATCTCAAGTAATTGAACTACGCCAAAAGCTCAAGGAGGATCCGCAGGTTTCAAATCCATTGGAATTACCCCATCCTTCAGTGACTTCAGCGAAGAAATGTCTCTCCTACACTGGTGTTCTATCAACAAAACTTGATGGCAAGGAGCTAGGCCGTGGTGATAAAGCAAGAAATATAAAGTTGAGGCAGTCTATGCGGCAATCATCGGCTGCTCCTTTTACACTAATGCACGAAATCCGCAAACTTGAGCACCTGCAAGAGCAGCTAGGAGATGAAGCAAATCGAGCCCTGGAAGTATTACAAAAGGAGGTGGCTTGTCATAGACTAGGCAACCAAGATGCAGCTGAAACAATTGCTAACCTGCAAGCAGAAATAAGAGAAATGCAGTCAGTAAGATCAGTGCCAAAAGATGTTGATGTTGGAACTGTGGTTGCTACCAACAAGAGTGTCAGTGCTAATCTAAAGGAGGAGATCACAAGACTTCATTCACAGGGCACCACTATTGCAAATCTTGAGGAACAGCTTGAAAGTGTTCAGAAGTCTATAGATAAATTGGTGATGTCTCTTCCTAGCAATTTTGAACAATGCAATAATGAAGCATTCACCAAGTCTAAGAAGGAGTCCAAAAAGAAAAAGTTATCACCTTTAGCTTCAAGCAACGCTGCCAACCTGCCAAATTTTATCAGATCACCTTGCTCACCTCTATCAGCTTCTCGTCAAATTGTAGAGTCTGATGAAATTGAAAATAGAGTTCCTGAACATGATGATACTTTGTTCAGTGATACCCAACCAGAGTCTGATAAGGGGACTCCCACAAAGAGTGAAGATTGTGGAGATGTTTCGTCAAAGGAAAACACTCCATATAGGCCTTCTAGTTCGGTAAACATGAAGAAAATGCAGAAGATGTTCCAAAATGCAGCAGAAGAGAATGTAAGAAGCATAAGAACATATGTAACAGAGCTCAAAGAGCGGGTGGCCAAACTGCAGTACCAAAAGCAACTTCTAGTCTGCCAGGTTTTGGAGCTGGAAGCAAACGAAGCAGCTGGGTATGATATGGAGAATGATGAAATTACATGCGAGCCAGAGGAGCCCCAGGTCCCATGGCAGATAACTTTCAAGGATCAAAGGCAGCAAATCATTGAGTTATGGGATTTGTGCTATGTCTCCATCATCCATAGGACACAGTTTTATTTGTTATTCAAGGGAGATCCAGCTGATCAAATCTATGTGGAAGTGGAGCTCAGGCGATTGACATGGTTGCAAGAGCATCTGGCAGAACTTGGTAATGCTAGCCCTGCTCCTCATGTGGGAGACGAGCCAGCAGTCTCTTTGTCATCAAGTATCCGAGCACTAAGGCGTGAAAGGGAGTTCCTTGCCAAGAGGGTAACCTCACGTTTGAGCGCAGAGGAGAGAGATGCATTGTATATCAAATGGGATGTTCCACTCGAAGGGAAGCAGAGGAGGATGCAGTTTGTGAATAAGCTCTGGACCGACCCTCATGATGCCAAGCATATACAGGAGAGTGCTGAGATAGTTGCAAAGCTTGTTGGTTTCTGCGAAAGCGGCAACATGCCAAAGGAGATGTTTGAGCTGAATTTTGCACTTCCATCTGATAGGAGGCCATGGATTATGGGATGGAACCCAATTTCAAACCTTCTTAACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

980

Amino Acids

110.41

Weight (kDa)

6.55

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 45 - 177 1.7e-21 Microtubule binding
Kinesin PF00225 48 - 362 1.3e-99 Kinesin motor domain
DUF3490 PF11995 797 - 960 5.4e-72 Domain of unknown function (DUF3490)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1536
AasI GACNNNNNNGTC 1 cut(s) 88
Acc16I TGCGCA 1 cut(s) 1178
Acc36I ACCTGC 4 cut(s) 1312, 1536, 1644, 1953
AccB1I GGYRCC 1 cut(s) 1769
AccB7I CCANNNNNTGG 1 cut(s) 2293
AccBSI CCGCTC 2 cut(s) 240, 2245
AccII CGCG 1 cut(s) 1101
AccIII TCCGGA 1 cut(s) 491
AciI CCGC 6 cut(s) 238, 1319, 1471, 1513, 2245, 2838
AclWI GGATC 6 cut(s) 563, 1190, 1310, 1323, 2403, 2477
AcoI YGGCCR 2 cut(s) 928, 2250
AcsI RAATTY 4 cut(s) 751, 1221, 1951, 2869
AcuI CTGAAG 2 cut(s) 1338, 1347
AdeI CACNNNGTG 1 cut(s) 746
AfaI GTAC 5 cut(s) 401, 583, 739, 1012, 2264
AfiI CCNNNNNNNGG 4 cut(s) 578, 2293, 2582, 2723
AflIII ACRYGT 2 cut(s) 1099, 2937
AhlI ACTAGT 1 cut(s) 1129
AjnI CCWGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
AjuI GAANNNNNNNTTGG 2 cut(s) 2259, 2291
Alw21I GWGCWC 4 cut(s) 1527, 2238, 2517, 2626
Alw26I GTCTC 6 cut(s) 939, 1382, 1842, 2443, 2580, 2605
AlwI GGATC 6 cut(s) 563, 1190, 1310, 1323, 2403, 2477
AlwNI CAGNNNCTG 1 cut(s) 2072
Aor13HI TCCGGA 1 cut(s) 491
AoxI GGCC 8 cut(s) 104, 149, 252, 928, 1426, 2141, 2250, 2894
ApeKI GCWGC 9 cut(s) 970, 1174, 1484, 1537, 1616, 1937, 2192, 2315, 2404
ApoI RAATTY 4 cut(s) 751, 1221, 1951, 2869
Asp700I GAANNNNTTC 2 cut(s) 1806, 2180
AspLEI GCGC 2 cut(s) 1179, 2678
AspS9I GGNCC 6 cut(s) 104, 235, 281, 523, 2371, 2763
AsuHPI GGTGA 7 cut(s) 686, 1445, 1843, 1870, 1908, 1956, 1965
AsuII TTCGAA 1 cut(s) 68
AsuNHI GCTAGC 1 cut(s) 2564
AvaII GGWCC 5 cut(s) 235, 281, 523, 2371, 2763
BaeGI GKGCMC 1 cut(s) 1772
BaeI ACNNNNGTAYC 6 cut(s) 204, 237, 573, 606, 2246, 2279
BalI TGGCCA 2 cut(s) 930, 2252
BamHI GGATCC 1 cut(s) 1315
BanI GGYRCC 1 cut(s) 1769
BanII GRGCYC 4 cut(s) 1564, 2238, 2367, 2517
BbsI GAAGAC 2 cut(s) 330, 401
Bbv12I GWGCWC 4 cut(s) 1527, 2238, 2517, 2626
BbvI GCAGC 9 cut(s) 982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BccI CCATC 9 cut(s) 340, 830, 1207, 1225, 1356, 1406, 2450, 2890, 2904
BceAI ACGGC 1 cut(s) 1413
BciT130I CCWGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
BciVI GTATCC 1 cut(s) 2627
BclI TGATCA 2 cut(s) 622, 2491
BcoDI GTCTC 6 cut(s) 939, 1382, 1842, 2443, 2580, 2605
BcuI ACTAGT 1 cut(s) 1129
BfmI CTRYAG 3 cut(s) 940, 1818, 2258
BfuAI ACCTGC 4 cut(s) 1312, 1536, 1644, 1953
BfuI GTATCC 1 cut(s) 2627
BglI GCCNNNNNGGC 1 cut(s) 1073
BglII AGATCT 2 cut(s) 767, 796
Bme1390I CCNGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
Bme18I GGWCC 5 cut(s) 235, 281, 523, 2371, 2763
BmgT120I GGNCC 6 cut(s) 104, 235, 281, 523, 2371, 2763
BmiI GGNNCC 6 cut(s) 22, 1317, 1771, 2364, 2373, 2915
BmrFI CCNGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
BmsI GCATC 7 cut(s) 210, 360, 1603, 2551, 2680, 2730, 2767
BmtI GCTAGC 1 cut(s) 2568
BpiI GAAGAC 2 cut(s) 330, 401
BpmI CTGGAG 3 cut(s) 45, 81, 447
Bpu10I CCTNAGC 3 cut(s) 848, 872, 2516
Bpu14I TTCGAA 1 cut(s) 68
BpuEI CTTGAG 6 cut(s) 652, 1036, 1266, 1292, 1541, 1808
Bsa29I ATCGAT 1 cut(s) 204
BsaBI GATNNNNATC 1 cut(s) 350
BsaJI CCNNGG 6 cut(s) 1071, 1429, 1563, 2367, 2375, 2897
BsaWI WCCGGW 1 cut(s) 491
Bsc4I CCNNNNNNNGG 4 cut(s) 578, 2293, 2582, 2723
Bse1I ACTGG 4 cut(s) 50, 86, 603, 1393
Bse3DI GCAATG 2 cut(s) 625, 1032
Bse8I GATNNNNATC 1 cut(s) 350
BseAI TCCGGA 1 cut(s) 491
BseBI CCWGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
BseCI ATCGAT 1 cut(s) 204
BseDI CCNNGG 6 cut(s) 1071, 1429, 1563, 2367, 2375, 2897
BseGI GGATG 5 cut(s) 1348, 2445, 2716, 2745, 2915
BseJI GATNNNNATC 1 cut(s) 350
BseLI CCNNNNNNNGG 4 cut(s) 578, 2293, 2582, 2723
BseMI GCAATG 2 cut(s) 625, 1032
BseMII CTCAG 4 cut(s) 146, 922, 2530, 2793
BseNI ACTGG 4 cut(s) 50, 86, 603, 1393
BseRI GAGGAG 5 cut(s) 1757, 2375, 2565, 2696, 2749
BseSI GKGCMC 1 cut(s) 1772
BseXI GCAGC 9 cut(s) 982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BseYI CCCAGC 2 cut(s) 25, 2318
Bsh1236I CGCG 1 cut(s) 1101
BshFI GGCC 8 cut(s) 106, 151, 254, 930, 1428, 2143, 2252, 2896
BshNI GGYRCC 1 cut(s) 1769
BshVI ATCGAT 1 cut(s) 204
BsiHKAI GWGCWC 4 cut(s) 1527, 2238, 2517, 2626
BsiSI CCGG 1 cut(s) 492
BslFI GGGAC 2 cut(s) 2095, 2357
BslI CCNNNNNNNGG 4 cut(s) 578, 2293, 2582, 2723
BsmAI GTCTC 6 cut(s) 939, 1382, 1842, 2443, 2580, 2605
BsmBI CGTCTC 1 cut(s) 2580
BsmFI GGGAC 2 cut(s) 2095, 2357
BsmI GAATGC 4 cut(s) 203, 973, 994, 1874
BsnI GGCC 8 cut(s) 106, 151, 254, 930, 1428, 2143, 2252, 2896
Bsp119I TTCGAA 1 cut(s) 68
Bsp1286I GDGCHC 7 cut(s) 1527, 1564, 1772, 2238, 2367, 2517, 2626
Bsp13I TCCGGA 1 cut(s) 491
Bsp19I CCATGG 2 cut(s) 2375, 2897
BspACI CCGC 6 cut(s) 238, 1319, 1471, 1513, 2245, 2838
BspANI GGCC 8 cut(s) 106, 151, 254, 930, 1428, 2143, 2252, 2896
BspCNI CTCAG 4 cut(s) 147, 921, 2529, 2794
BspDI ATCGAT 1 cut(s) 204
BspEI TCCGGA 1 cut(s) 491
BspFNI CGCG 1 cut(s) 1101
BspHI TCATGA 1 cut(s) 2773
BspLI GGNNCC 6 cut(s) 22, 1317, 1771, 2364, 2373, 2915
BspMAI CTGCAG 1 cut(s) 2262
BspMI ACCTGC 4 cut(s) 1312, 1536, 1644, 1953
BspOI GCTAGC 1 cut(s) 2568
BspPI GGATC 6 cut(s) 563, 1190, 1310, 1323, 2403, 2477
BspT104I TTCGAA 1 cut(s) 68
BspT107I GGYRCC 1 cut(s) 1769
BsrBI CCGCTC 2 cut(s) 240, 2245
BsrDI GCAATG 2 cut(s) 625, 1032
BsrI ACTGG 4 cut(s) 50, 86, 603, 1393
BssECI CCNNGG 6 cut(s) 1071, 1429, 1563, 2367, 2375, 2897
BssT1I CCWWGG 2 cut(s) 2375, 2897
Bst2UI CCWGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
Bst4CI ACNGT 8 cut(s) 7, 139, 304, 586, 705, 895, 1702, 2460
Bst6I CTCTTC 3 cut(s) 114, 1845, 2193
BstAPI GCANNNNNTGC 2 cut(s) 998, 1468
BstBI TTCGAA 1 cut(s) 68
BstC8I GCNNGC 8 cut(s) 616, 781, 994, 1099, 1641, 2354, 2566, 2595
BstDEI CTNAG 8 cut(s) 155, 848, 872, 908, 1887, 2516, 2627, 2802
BstDSI CCRYGG 3 cut(s) 1429, 2375, 2897
BstEII GGTNACC 1 cut(s) 2659
BstF5I GGATG 5 cut(s) 1348, 2445, 2716, 2745, 2915
BstFNI CGCG 1 cut(s) 1101
BstHHI GCGC 2 cut(s) 1179, 2678
BstMAI GTCTC 6 cut(s) 939, 1382, 1842, 2443, 2580, 2605
BstNI CCWGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
BstNSI RCATGY 3 cut(s) 2352, 2848, 2941
BstPI GGTNACC 1 cut(s) 2659
BstSCI CCNGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
BstSFI CTRYAG 3 cut(s) 940, 1818, 2258
BstSLI GKGCMC 1 cut(s) 1772
BstUI CGCG 1 cut(s) 1101
BstV1I GCAGC 9 cut(s) 982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
BstV2I GAAGAC 2 cut(s) 330, 401
BstX2I RGATCY 5 cut(s) 767, 796, 1195, 1315, 2482
BstYI RGATCY 5 cut(s) 767, 796, 1195, 1315, 2482
Bsu15I ATCGAT 1 cut(s) 204
BsuI GTATCC 1 cut(s) 2627
BsuRI GGCC 8 cut(s) 106, 151, 254, 930, 1428, 2143, 2252, 2896
BsuTUI ATCGAT 1 cut(s) 204
BtgI CCRYGG 3 cut(s) 1429, 2375, 2897
BtsCI GGATG 5 cut(s) 1348, 2445, 2716, 2745, 2915
BtsI GCAGTG 2 cut(s) 394, 996
BveI ACCTGC 4 cut(s) 1312, 1536, 1644, 1953
Cac8I GCNNGC 8 cut(s) 616, 781, 994, 1099, 1641, 2354, 2566, 2595
CaiI CAGNNNCTG 1 cut(s) 2072
CciI TCATGA 1 cut(s) 2773
CfoI GCGC 2 cut(s) 1179, 2678
Cfr13I GGNCC 6 cut(s) 104, 235, 281, 523, 2371, 2763
ClaI ATCGAT 1 cut(s) 204
Csp6I GTAC 5 cut(s) 400, 582, 738, 1011, 2263
CviQI GTAC 5 cut(s) 400, 582, 738, 1011, 2263
DdeI CTNAG 8 cut(s) 155, 848, 872, 908, 1887, 2516, 2627, 2802
DraI TTTAAA 1 cut(s) 687
DraIII CACNNNGTG 1 cut(s) 746
DrdI GACNNNNNNGTC 1 cut(s) 88
DseDI GACNNNNNNGTC 1 cut(s) 88
EaeI YGGCCR 2 cut(s) 928, 2250
Eam1104I CTCTTC 3 cut(s) 114, 1845, 2193
EarI CTCTTC 3 cut(s) 114, 1845, 2193
Ecl136II GAGCTC 2 cut(s) 2236, 2515
Eco130I CCWWGG 2 cut(s) 2375, 2897
Eco147I AGGCCT 3 cut(s) 151, 254, 2143
Eco24I GRGCYC 4 cut(s) 1564, 2238, 2367, 2517
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 5 cut(s) 235, 281, 523, 2371, 2763
Eco53kI GAGCTC 2 cut(s) 2236, 2515
Eco57I CTGAAG 2 cut(s) 1338, 1347
Eco91I GGTNACC 1 cut(s) 2659
EcoICRI GAGCTC 2 cut(s) 2236, 2515
EcoO109I RGGNCCY 2 cut(s) 523, 2371
EcoO65I GGTNACC 1 cut(s) 2659
EcoRII CCWGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 2 cut(s) 2375, 2897
EcoT22I ATGCAT 2 cut(s) 203, 2695
EcoT38I GRGCYC 4 cut(s) 1564, 2238, 2367, 2517
ErhI CCWWGG 2 cut(s) 2375, 2897
Esp3I CGTCTC 1 cut(s) 2580
FaqI GGGAC 2 cut(s) 2095, 2357
FauI CCCGC 1 cut(s) 2238
FauNDI CATATG 2 cut(s) 1007, 2224
FbaI TGATCA 2 cut(s) 622, 2491
FokI GGATG 5 cut(s) 1335, 2432, 2723, 2752, 2922
FriOI GRGCYC 4 cut(s) 1564, 2238, 2367, 2517
FspI TGCGCA 1 cut(s) 1178
GlaI GCGC 2 cut(s) 1178, 2677
GsaI CCCAGC 2 cut(s) 29, 2322
GsuI CTGGAG 3 cut(s) 45, 81, 447
HaeIII GGCC 8 cut(s) 106, 151, 254, 930, 1428, 2143, 2252, 2896
HapII CCGG 1 cut(s) 492
HhaI GCGC 2 cut(s) 1179, 2678
Hin6I GCGC 2 cut(s) 1177, 2676
HinP1I GCGC 2 cut(s) 1177, 2676
HincII GTYRAC 1 cut(s) 93
HindII GTYRAC 1 cut(s) 93
HindIII AAGCTT 2 cut(s) 557, 2816
HinfI GANTC 8 cut(s) 539, 947, 1018, 1030, 1895, 2003, 2069, 2083
HpaII CCGG 1 cut(s) 492
HphI GGTGA 7 cut(s) 686, 1445, 1843, 1870, 1908, 1956, 1965
Hpy166II GTNNAC 7 cut(s) 93, 235, 402, 740, 812, 1105, 2158
Hpy8I GTNNAC 7 cut(s) 93, 235, 402, 740, 812, 1105, 2158
HpyAV CCTTC 8 cut(s) 308, 848, 1141, 1362, 1885, 2154, 2717, 2939
HpyCH4III ACNGT 8 cut(s) 7, 139, 304, 586, 705, 895, 1702, 2460
HpyCH4IV ACGT 2 cut(s) 398, 2668
HpyF3I CTNAG 8 cut(s) 155, 848, 872, 908, 1887, 2516, 2627, 2802
HpySE526I ACGT 2 cut(s) 398, 2668
HspAI GCGC 2 cut(s) 1177, 2676
Kpn2I TCCGGA 1 cut(s) 491
Ksp22I TGATCA 2 cut(s) 622, 2491
LmnI GCTCC 7 cut(s) 166, 1420, 1492, 2296, 2362, 2512, 2578
Lsp1109I GCAGC 9 cut(s) 982, 1161, 1471, 1549, 1628, 1924, 2204, 2327, 2416
LweI GCATC 7 cut(s) 210, 360, 1603, 2551, 2680, 2730, 2767
MaeII ACGT 2 cut(s) 398, 2668
MaeIII GTNAC 7 cut(s) 52, 133, 705, 1084, 1357, 2227, 2659
MbiI CCGCTC 2 cut(s) 240, 2245
MfeI CAATTG 3 cut(s) 170, 729, 1626
MflI RGATCY 5 cut(s) 767, 796, 1195, 1315, 2482
MhlI GDGCHC 7 cut(s) 1527, 1564, 1772, 2238, 2367, 2517, 2626
MlsI TGGCCA 2 cut(s) 930, 2252
MluI ACGCGT 1 cut(s) 1099
MluNI TGGCCA 2 cut(s) 930, 2252
MlyI GAGTC 7 cut(s) 941, 1027, 1039, 1904, 2012, 2077, 2078
MmeI TCCRAC 2 cut(s) 895, 1675
Mox20I TGGCCA 2 cut(s) 930, 2252
Mph1103I ATGCAT 2 cut(s) 203, 2695
MroI TCCGGA 1 cut(s) 491
MroXI GAANNNNTTC 2 cut(s) 1806, 2180
MscI TGGCCA 2 cut(s) 930, 2252
MseI TTAA 4 cut(s) 530, 641, 686, 2934
MslI CAYNNNNRTG 2 cut(s) 196, 834
Msp20I TGGCCA 2 cut(s) 930, 2252
MspA1I CMGCKG 3 cut(s) 1619, 2318, 2489
MspI CCGG 1 cut(s) 492
MspR9I CCNGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
MunI CAATTG 3 cut(s) 170, 729, 1626
Mva1269I GAATGC 4 cut(s) 203, 973, 994, 1874
MvaI CCWGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
MvnI CGCG 1 cut(s) 1101
NcoI CCATGG 2 cut(s) 2375, 2897
NdeI CATATG 2 cut(s) 1007, 2224
NheI GCTAGC 1 cut(s) 2564
NlaIV GGNNCC 6 cut(s) 22, 1317, 1771, 2364, 2373, 2915
NmeAIII GCCGAG 1 cut(s) 132
NmuCI GTSAC 4 cut(s) 52, 705, 1084, 1357
NsbI TGCGCA 1 cut(s) 1178
NsiI ATGCAT 2 cut(s) 203, 2695
NspI RCATGY 3 cut(s) 2352, 2848, 2941
NspV TTCGAA 1 cut(s) 68
PagI TCATGA 1 cut(s) 2773
PaqCI CACCTGC 1 cut(s) 1536
PceI AGGCCT 3 cut(s) 151, 254, 2143
PciI ACATGT 1 cut(s) 2937
PctI GAATGC 4 cut(s) 203, 973, 994, 1874
PdmI GAANNNNTTC 2 cut(s) 1806, 2180
PfeI GAWTC 1 cut(s) 539
PflMI CCANNNNNTGG 1 cut(s) 2293
PfoI TCCNGGA 2 cut(s) 16, 97
PleI GAGTC 7 cut(s) 941, 1026, 1038, 1903, 2011, 2077, 2077
PpsI GAGTC 7 cut(s) 941, 1026, 1038, 1903, 2011, 2077, 2077
PpuMI RGGWCCY 2 cut(s) 523, 2371
PscI ACATGT 1 cut(s) 2937
Psp124BI GAGCTC 2 cut(s) 2238, 2517
Psp5II RGGWCCY 2 cut(s) 523, 2371
Psp6I CCWGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
PspEI GGTNACC 1 cut(s) 2659
PspFI CCCAGC 2 cut(s) 25, 2318
PspGI CCWGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
PspN4I GGNNCC 6 cut(s) 22, 1317, 1771, 2364, 2373, 2915
PspPI GGNCC 6 cut(s) 104, 235, 281, 523, 2371, 2763
PspPPI RGGWCCY 2 cut(s) 523, 2371
PstI CTGCAG 1 cut(s) 2262
PstNI CAGNNNCTG 1 cut(s) 2072
PsuI RGATCY 5 cut(s) 767, 796, 1195, 1315, 2482
PvuII CAGCTG 3 cut(s) 1619, 2318, 2489
RsaI GTAC 5 cut(s) 401, 583, 739, 1012, 2264
RsaNI GTAC 5 cut(s) 400, 582, 738, 1011, 2263
RseI CAYNNNNRTG 2 cut(s) 196, 834
SacI GAGCTC 2 cut(s) 2238, 2517
SaqAI TTAA 4 cut(s) 530, 641, 686, 2934
Sau96I GGNCC 6 cut(s) 104, 235, 281, 523, 2371, 2763
SchI GAGTC 7 cut(s) 941, 1027, 1039, 1904, 2012, 2077, 2078
ScrFI CCNGG 6 cut(s) 18, 99, 1072, 1565, 2288, 2369
SduI GDGCHC 7 cut(s) 1527, 1564, 1772, 2238, 2367, 2517, 2626
SfaNI GCATC 7 cut(s) 210, 360, 1603, 2551, 2680, 2730, 2767
SfcI CTRYAG 3 cut(s) 940, 1818, 2258
SfuI TTCGAA 1 cut(s) 68
SinI GGWCC 5 cut(s) 235, 281, 523, 2371, 2763
SmiMI CAYNNNNRTG 2 cut(s) 196, 834
SmlI CTYRAG 6 cut(s) 631, 1015, 1281, 1307, 1520, 1787
SmoI CTYRAG 6 cut(s) 631, 1015, 1281, 1307, 1520, 1787
SpeI ACTAGT 1 cut(s) 1129
SseBI AGGCCT 3 cut(s) 151, 254, 2143
SsiI CCGC 6 cut(s) 238, 1319, 1471, 1513, 2245, 2838
SstI GAGCTC 2 cut(s) 2238, 2517
StuI AGGCCT 3 cut(s) 151, 254, 2143
StyD4I CCNGG 6 cut(s) 16, 97, 1070, 1563, 2286, 2367
StyI CCWWGG 2 cut(s) 2375, 2897
TaaI ACNGT 8 cut(s) 7, 139, 304, 586, 705, 895, 1702, 2460
TaiI ACGT 2 cut(s) 401, 2671
TaqI TCGA 7 cut(s) 68, 75, 204, 224, 1202, 1558, 2721
TaqII GACCGA 2 cut(s) 269, 2780
TatI WGTACW 1 cut(s) 737
TauI GCSGC 2 cut(s) 1474, 2841
TfiI GAWTC 1 cut(s) 539
Tru1I TTAA 4 cut(s) 530, 641, 686, 2934
Tru9I TTAA 4 cut(s) 530, 641, 686, 2934
TseFI GTSAC 4 cut(s) 52, 705, 1084, 1357
TseI GCWGC 9 cut(s) 970, 1174, 1484, 1537, 1616, 1937, 2192, 2315, 2404
Tsp45I GTSAC 4 cut(s) 52, 705, 1084, 1357
TspDTI ATGAA 7 cut(s) 470, 1563, 1748, 1884, 2025, 2177, 2355
TspGWI ACGGA 1 cut(s) 734
Van91I CCANNNNNTGG 1 cut(s) 2293
VpaK11BI GGWCC 5 cut(s) 235, 281, 523, 2371, 2763
XapI RAATTY 4 cut(s) 751, 1221, 1951, 2869
XbaI TCTAGA 1 cut(s) 562
XceI RCATGY 3 cut(s) 2352, 2848, 2941
XmnI GAANNNNTTC 2 cut(s) 1806, 2180
Zsp2I ATGCAT 2 cut(s) 203, 2695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.