Rroxscaffold_3G00254490

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000323
Physical Location & Seq
Forward (+)
48710646 .. 48713325
2680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254490.1

Sequence Viewer

Length: 1377 bp
ATGCGTCCCTTATCCCGCCACGTAGCAGTGATCGGCGCCGGTGCCAGCGGTTTGGTGGCGGCACGTGAGCTTCGGCGGGAAGGTCACAACGTCGTAGTGTTCGAGAAAGGAGACCAATTGGGTGGCAATTGGGTGTACACCCCAGAAGTGGAGTCCGACCCAATTGGTCTTCACCCAAACAGAACCATAGTCCACTCCAGCATGTACCAGTCTCTCAGGACTAACCTCCCCAGAGAGATCATGGGGTTCCGGGACTACCCATTTGCGGCCAAGGAAGAAGATGAAGAGAGAGACCCCAGAAGGTTTCCGGGTCACAGAGAGGTGTTGAAGTACTTGAATGACTTTGCCGGCGAGTTTGGGATTTGTGAGATGGTGAGGTTTGAGACTGAGGTGGTGTTCGTGGGTTTGGTGGAGGGTGGCAAGTGGATGGTGAAGTCCAAGAGCAAGACAAGTGATGAGGGTTTGGAAGAGATTTATGATGCTGTGGTCGTTTGTTGTGGGCATTATACTCAGCCTCGTGTAGCAGAAATTTCAGGTATCACTACATGGAAAGGGCGGCAAATTCACAGCCACAACTATCGAACTCCTGAGCCGTTTCGAGATCAGGTTGTAATTTTGATAGGGAGCTCCAGTAGTGCTACTGATATCTATCGGGACATCGCTGGAGTTGCCAAAGAGGTTCACATTTCATCTAGATCTATTGCTTCCGAAACCACAGAGAAGAAGCCTCACTTTGATACGATGCGGCTTAACTCTATGATTAATAGTGGCTATGAAAAATTGTGGGTTCACTCTAAGATTAAAAGTGTCCATGAAGATGGTAGTGTTGTTTTCACAGATGGGAGTGTTGTCGTCGCTGACACCATTCTTCATTGCACAGGGTACAAATATCATTTCCCTTTTCTTGAAACCAATGGCATTGTAACCGTGGATGGAGATGACAACCGTGTCGGGCCACTGTTCAAGCATGTCTTCCCGCCTGCCTTGGCACCGTCGCTTTCTTTTGTTGGGGTACCGTGGAAGACCGTTCCTTTCCCCAATTTTGAACTTCAAAGCAAGTGGATAGCAGGAGTTTTGTCGAATCGAATTGCGCTTCCATCCAAAGAGGAGATGATGAAGGATGTCAAAGCTTTCTACTCGTCACTTGAAGCTTCTGGCAAACCTACACGACACACTCATGACATTTTTGATTATCGGGGTGAATATGCTGATTGGCTTACAGTACAATGTGGGTCTCCAGTCCTAGAAGAATGGAGAGAACAAATGATGTTGACAGTAGCAAAGAATTGGTTAGTCCGACCCAAGACATATCAAGATGAGTGGGATGACAACCATTTAGTACTGCAAGCTTATGTGAGCTTCAAGAATAGGGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

458

Amino Acids

51.93

Weight (kDa)

6.15

Isoelectric Point (pI)

37.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 6 - 233 4.6e-36 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 7 - 306 1.6e-13 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 7 - 42 8.9e-08 FAD dependent oxidoreductase
HI0933_like PF03486 7 - 41 8e-06 HI0933-like protein Rossmann domain
FAD_binding_2 PF00890 8 - 45 2.4e-07 FAD binding domain
FAD_oxidored PF12831 8 - 77 9.5e-07 FAD dependent oxidoreductase
NAD_binding_9 PF13454 9 - 168 7.2e-06 FAD-NAD(P)-binding
NAD_binding_8 PF13450 10 - 44 1.8e-11 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 16 - 81 4.3e-07 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 74 - 309 2.9e-15 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 260 - 380 7.9e-16 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 947
Acc65I GGTACC 1 cut(s) 1012
AccB1I GGYRCC 4 cut(s) 35, 41, 988, 1012
AciI CCGC 8 cut(s) 16, 48, 59, 76, 266, 556, 745, 977
AcoI YGGCCR 1 cut(s) 267
AcsI RAATTY 2 cut(s) 528, 561
AcvI CACGTG 1 cut(s) 65
AcyI GRCGYC 1 cut(s) 36
AfaI GTAC 7 cut(s) 137, 206, 332, 884, 1014, 1224, 1341
AfiI CCNNNNNNNGG 2 cut(s) 148, 265
AgsI TTSAA 8 cut(s) 328, 337, 908, 964, 1046, 1052, 1148, 1363
AluBI AGCT 6 cut(s) 70, 627, 1130, 1151, 1349, 1359
AluI AGCT 6 cut(s) 70, 627, 1130, 1151, 1349, 1359
Alw21I GWGCWC 1 cut(s) 629
Alw26I GTCTC 5 cut(s) 105, 216, 285, 377, 1239
AoxI GGCC 2 cut(s) 267, 953
ApoI RAATTY 2 cut(s) 528, 561
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
AseI ATTAAT 1 cut(s) 762
Asp718I GGTACC 1 cut(s) 1012
AspLEI GCGC 2 cut(s) 38, 1093
AspS9I GGNCC 1 cut(s) 953
AsuC2I CCSGG 2 cut(s) 251, 309
AsuHPI GGTGA 4 cut(s) 164, 385, 442, 1211
BanI GGYRCC 4 cut(s) 35, 41, 988, 1012
BanII GRGCYC 1 cut(s) 629
BauI CACGAG 1 cut(s) 516
BbrPI CACGTG 1 cut(s) 65
BbsI GAAGAC 3 cut(s) 161, 964, 1028
Bbv12I GWGCWC 1 cut(s) 629
BccI CCATC 6 cut(s) 364, 421, 812, 833, 926, 1105
BceAI ACGGC 1 cut(s) 577
BcnI CCSGG 2 cut(s) 251, 309
BcoDI GTCTC 5 cut(s) 105, 216, 285, 377, 1239
BfaI CTAG 2 cut(s) 693, 1244
BfoI RGCGCY 1 cut(s) 39
BglII AGATCT 1 cut(s) 695
BisI GCNGC 4 cut(s) 60, 267, 557, 746
BlsI GCNGC 4 cut(s) 61, 268, 558, 747
BmcAI AGTACT 2 cut(s) 332, 1341
Bme1390I CCNGG 2 cut(s) 251, 309
BmgT120I GGNCC 1 cut(s) 953
BmiI GGNNCC 5 cut(s) 37, 43, 248, 990, 1014
BmrFI CCNGG 2 cut(s) 251, 309
BmsI GCATC 2 cut(s) 469, 732
BpiI GAAGAC 3 cut(s) 161, 964, 1028
BpmI CTGGAG 4 cut(s) 181, 613, 684, 1221
Bpu10I CCTNAGC 1 cut(s) 588
BpuMI CCSGG 2 cut(s) 251, 309
BsaAI YACGTR 2 cut(s) 22, 65
BsaBI GATNNNNATC 1 cut(s) 648
BsaHI GRCGYC 1 cut(s) 36
BsaI GGTCTC 3 cut(s) 105, 285, 1239
BsaJI CCNNGG 4 cut(s) 270, 927, 984, 1016
BsaXI ACNNNNNCTCC 2 cut(s) 616, 646
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 265
Bse118I RCCGGY 2 cut(s) 38, 347
Bse1I ACTGG 3 cut(s) 208, 630, 1238
Bse3DI GCAATG 1 cut(s) 871
Bse8I GATNNNNATC 1 cut(s) 648
BseDI CCNNGG 4 cut(s) 270, 927, 984, 1016
BseGI GGATG 5 cut(s) 432, 937, 1097, 1126, 1330
BseJI GATNNNNATC 1 cut(s) 648
BseLI CCNNNNNNNGG 2 cut(s) 148, 265
BseMI GCAATG 1 cut(s) 871
BseMII CTCAG 4 cut(s) 229, 378, 524, 579
BseNI ACTGG 3 cut(s) 208, 630, 1238
BseRI GAGGAG 1 cut(s) 1121
BshFI GGCC 2 cut(s) 269, 955
BshNI GGYRCC 4 cut(s) 35, 41, 988, 1012
BsiHKAI GWGCWC 1 cut(s) 629
BsiSI CCGG 4 cut(s) 39, 250, 308, 348
BslFI GGGAC 2 cut(s) 266, 668
BslI CCNNNNNNNGG 2 cut(s) 148, 265
BsmAI GTCTC 5 cut(s) 105, 216, 285, 377, 1239
BsmFI GGGAC 2 cut(s) 266, 668
BsnI GGCC 2 cut(s) 269, 955
Bso31I GGTCTC 3 cut(s) 105, 285, 1239
Bsp1286I GDGCHC 1 cut(s) 629
Bsp1407I TGTACA 1 cut(s) 135
Bsp143I GATC 4 cut(s) 30, 237, 601, 695
BspACI CCGC 8 cut(s) 16, 48, 59, 76, 266, 556, 745, 977
BspANI GGCC 2 cut(s) 269, 955
BspCNI CTCAG 4 cut(s) 228, 379, 523, 580
BspHI TCATGA 1 cut(s) 1177
BspLI GGNNCC 5 cut(s) 37, 43, 248, 990, 1014
BspT107I GGYRCC 4 cut(s) 35, 41, 988, 1012
BspTNI GGTCTC 3 cut(s) 105, 285, 1239
BsrDI GCAATG 1 cut(s) 871
BsrFI RCCGGY 2 cut(s) 38, 347
BsrGI TGTACA 1 cut(s) 135
BsrI ACTGG 3 cut(s) 208, 630, 1238
BssAI RCCGGY 2 cut(s) 38, 347
BssECI CCNNGG 4 cut(s) 270, 927, 984, 1016
BssMI GATC 4 cut(s) 30, 237, 601, 695
BssNI GRCGYC 1 cut(s) 36
BssSI CACGAG 1 cut(s) 516
BssT1I CCWWGG 2 cut(s) 270, 984
Bst2BI CACGAG 1 cut(s) 516
Bst4CI ACNGT 8 cut(s) 928, 947, 960, 993, 1017, 1027, 1222, 1276
Bst6I CTCTTC 2 cut(s) 279, 462
BstACI GRCGYC 1 cut(s) 36
BstAUI TGTACA 1 cut(s) 135
BstBAI YACGTR 2 cut(s) 22, 65
BstC8I GCNNGC 4 cut(s) 46, 349, 981, 1347
BstDEI CTNAG 5 cut(s) 215, 387, 510, 588, 795
BstDSI CCRYGG 2 cut(s) 927, 1016
BstF5I GGATG 5 cut(s) 432, 937, 1097, 1126, 1330
BstH2I RGCGCY 1 cut(s) 39
BstHHI GCGC 2 cut(s) 38, 1093
BstKTI GATC 4 cut(s) 33, 240, 604, 698
BstMAI GTCTC 5 cut(s) 105, 216, 285, 377, 1239
BstMBI GATC 4 cut(s) 30, 237, 601, 695
BstMWI GCNNNNNNNGC 1 cut(s) 668
BstNSI RCATGY 2 cut(s) 205, 971
BstSCI CCNGG 2 cut(s) 249, 307
BstV2I GAAGAC 3 cut(s) 161, 964, 1028
BstX2I RGATCY 1 cut(s) 695
BstXI CCANNNNNNTGG 3 cut(s) 52, 122, 818
BstYI RGATCY 1 cut(s) 695
BsuRI GGCC 2 cut(s) 269, 955
BtgI CCRYGG 2 cut(s) 927, 1016
BtgZI GCGATG 1 cut(s) 643
BtsCI GGATG 5 cut(s) 432, 937, 1097, 1126, 1330
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 2 cut(s) 33, 956
Cac8I GCNNGC 4 cut(s) 46, 349, 981, 1347
CciI TCATGA 1 cut(s) 1177
CfoI GCGC 2 cut(s) 38, 1093
Cfr10I RCCGGY 2 cut(s) 38, 347
Cfr13I GGNCC 1 cut(s) 953
Csp6I GTAC 7 cut(s) 136, 205, 331, 883, 1013, 1223, 1340
CspCI CAANNNNNGTGG 4 cut(s) 1040, 1075, 1301, 1336
CviAII CATG 6 cut(s) 202, 241, 546, 812, 968, 1178
CviQI GTAC 7 cut(s) 136, 205, 331, 883, 1013, 1223, 1340
DdeI CTNAG 5 cut(s) 215, 387, 510, 588, 795
DinI GGCGCC 1 cut(s) 37
DpnI GATC 4 cut(s) 32, 239, 603, 697
DpnII GATC 4 cut(s) 30, 237, 601, 695
DrdI GACNNNNNNGTC 1 cut(s) 947
DseDI GACNNNNNNGTC 1 cut(s) 947
EaeI YGGCCR 1 cut(s) 267
Eam1104I CTCTTC 2 cut(s) 279, 462
EarI CTCTTC 2 cut(s) 279, 462
Ecl136II GAGCTC 1 cut(s) 627
Eco130I CCWWGG 2 cut(s) 270, 984
Eco24I GRGCYC 1 cut(s) 629
Eco31I GGTCTC 3 cut(s) 105, 285, 1239
Eco32I GATATC 1 cut(s) 646
Eco53kI GAGCTC 1 cut(s) 627
Eco72I CACGTG 1 cut(s) 65
EcoICRI GAGCTC 1 cut(s) 627
EcoRV GATATC 1 cut(s) 646
EcoT14I CCWWGG 2 cut(s) 270, 984
EcoT38I GRGCYC 1 cut(s) 629
EgeI GGCGCC 1 cut(s) 37
EheI GGCGCC 1 cut(s) 37
ErhI CCWWGG 2 cut(s) 270, 984
FaeI CATG 6 cut(s) 205, 244, 549, 815, 971, 1181
FalI AAGNNNNNCTT 4 cut(s) 716, 748, 956, 988
FaqI GGGAC 2 cut(s) 266, 668
FatI CATG 6 cut(s) 201, 240, 545, 811, 967, 1177
FauI CCCGC 3 cut(s) 23, 69, 984
Fnu4HI GCNGC 4 cut(s) 60, 267, 557, 746
FokI GGATG 5 cut(s) 439, 944, 1084, 1133, 1337
FriOI GRGCYC 1 cut(s) 629
Fsp4HI GCNGC 4 cut(s) 60, 267, 557, 746
FspBI CTAG 2 cut(s) 693, 1244
GlaI GCGC 2 cut(s) 37, 1092
GluI GCNGC 4 cut(s) 60, 267, 557, 746
GsuI CTGGAG 4 cut(s) 181, 613, 684, 1221
HaeII RGCGCY 1 cut(s) 39
HaeIII GGCC 2 cut(s) 269, 955
HapII CCGG 4 cut(s) 39, 250, 308, 348
HhaI GCGC 2 cut(s) 38, 1093
Hin1I GRCGYC 1 cut(s) 36
Hin1II CATG 6 cut(s) 205, 244, 549, 815, 971, 1181
Hin6I GCGC 2 cut(s) 36, 1091
HinP1I GCGC 2 cut(s) 36, 1091
HincII GTYRAC 1 cut(s) 1272
HindII GTYRAC 1 cut(s) 1272
HindIII AAGCTT 3 cut(s) 1128, 1149, 1347
HinfI GANTC 2 cut(s) 152, 1081
HpaII CCGG 4 cut(s) 39, 250, 308, 348
HphI GGTGA 4 cut(s) 164, 385, 442, 1211
Hpy166II GTNNAC 6 cut(s) 136, 138, 193, 682, 790, 1272
Hpy188I TCNGA 3 cut(s) 157, 709, 1298
Hpy8I GTNNAC 6 cut(s) 136, 138, 193, 682, 790, 1272
Hpy99I CGWCG 3 cut(s) 95, 857, 997
HpyAV CCTTC 3 cut(s) 74, 294, 1111
HpyCH4III ACNGT 8 cut(s) 928, 947, 960, 993, 1017, 1027, 1222, 1276
HpyCH4IV ACGT 3 cut(s) 21, 64, 90
HpyCH4V TGCA 2 cut(s) 876, 1345
HpyF10VI GCNNNNNNNGC 1 cut(s) 668
HpyF3I CTNAG 5 cut(s) 215, 387, 510, 588, 795
HpySE526I ACGT 3 cut(s) 21, 64, 90
Hsp92I GRCGYC 1 cut(s) 36
Hsp92II CATG 6 cut(s) 205, 244, 549, 815, 971, 1181
HspAI GCGC 2 cut(s) 36, 1091
KasI GGCGCC 1 cut(s) 35
KpnI GGTACC 1 cut(s) 1016
KroI GCCGGC 1 cut(s) 347
KroNI GCCGGC 1 cut(s) 349
Kzo9I GATC 4 cut(s) 30, 237, 601, 695
LmnI GCTCC 2 cut(s) 624, 632
LweI GCATC 2 cut(s) 469, 732
MaeI CTAG 2 cut(s) 693, 1244
MaeII ACGT 3 cut(s) 21, 64, 90
MaeIII GTNAC 4 cut(s) 83, 311, 922, 1140
MalI GATC 4 cut(s) 32, 239, 603, 697
MboI GATC 4 cut(s) 30, 237, 601, 695
MfeI CAATTG 3 cut(s) 116, 127, 162
MflI RGATCY 1 cut(s) 695
MhlI GDGCHC 1 cut(s) 629
Mly113I GGCGCC 1 cut(s) 36
MlyI GAGTC 1 cut(s) 161
MmeI TCCRAC 2 cut(s) 180, 1321
MroNI GCCGGC 1 cut(s) 347
MseI TTAA 3 cut(s) 750, 762, 801
MslI CAYNNNNRTG 2 cut(s) 816, 1176
MspA1I CMGCKG 1 cut(s) 48
MspI CCGG 4 cut(s) 39, 250, 308, 348
MspR9I CCNGG 2 cut(s) 251, 309
MunI CAATTG 3 cut(s) 116, 127, 162
MwoI GCNNNNNNNGC 1 cut(s) 668
NaeI GCCGGC 1 cut(s) 349
NarI GGCGCC 1 cut(s) 36
NciI CCSGG 2 cut(s) 251, 309
NdeII GATC 4 cut(s) 30, 237, 601, 695
NgoMIV GCCGGC 1 cut(s) 347
NlaIII CATG 6 cut(s) 205, 244, 549, 815, 971, 1181
NlaIV GGNNCC 5 cut(s) 37, 43, 248, 990, 1014
NmuCI GTSAC 3 cut(s) 83, 311, 1140
NspI RCATGY 2 cut(s) 205, 971
PagI TCATGA 1 cut(s) 1177
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PdiI GCCGGC 1 cut(s) 349
PfeI GAWTC 1 cut(s) 1081
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 4 cut(s) 61, 268, 558, 747
PleI GAGTC 1 cut(s) 160
PluTI GGCGCC 1 cut(s) 39
PmaCI CACGTG 1 cut(s) 65
PmlI CACGTG 1 cut(s) 65
PpsI GAGTC 1 cut(s) 160
Ppu21I YACGTR 2 cut(s) 22, 65
PshBI ATTAAT 1 cut(s) 762
Psp124BI GAGCTC 1 cut(s) 629
PspCI CACGTG 1 cut(s) 65
PspN4I GGNNCC 5 cut(s) 37, 43, 248, 990, 1014
PspPI GGNCC 1 cut(s) 953
PsuI RGATCY 1 cut(s) 695
RsaI GTAC 7 cut(s) 137, 206, 332, 884, 1014, 1224, 1341
RsaNI GTAC 7 cut(s) 136, 205, 331, 883, 1013, 1223, 1340
RseI CAYNNNNRTG 2 cut(s) 816, 1176
SacI GAGCTC 1 cut(s) 629
SaqAI TTAA 3 cut(s) 750, 762, 801
SatI GCNGC 4 cut(s) 60, 267, 557, 746
Sau3AI GATC 4 cut(s) 30, 237, 601, 695
Sau96I GGNCC 1 cut(s) 953
ScaI AGTACT 2 cut(s) 332, 1341
SchI GAGTC 1 cut(s) 161
ScrFI CCNGG 2 cut(s) 251, 309
SduI GDGCHC 1 cut(s) 629
SfaNI GCATC 2 cut(s) 469, 732
SfoI GGCGCC 1 cut(s) 37
SgrAI CRCCGGYG 1 cut(s) 38
SmiMI CAYNNNNRTG 2 cut(s) 816, 1176
SsiI CCGC 8 cut(s) 16, 48, 59, 76, 266, 556, 745, 977
SspDI GGCGCC 1 cut(s) 35
SspMI CTAG 2 cut(s) 693, 1244
SstI GAGCTC 1 cut(s) 629
StyD4I CCNGG 2 cut(s) 249, 307
StyI CCWWGG 2 cut(s) 270, 984
TaaI ACNGT 8 cut(s) 928, 947, 960, 993, 1017, 1027, 1222, 1276
TaiI ACGT 3 cut(s) 24, 67, 93
TaqI TCGA 5 cut(s) 102, 580, 598, 1079, 1084
TatI WGTACW 4 cut(s) 135, 330, 1222, 1339
TauI GCSGC 4 cut(s) 62, 269, 559, 748
TfiI GAWTC 1 cut(s) 1081
Tru1I TTAA 3 cut(s) 750, 762, 801
Tru9I TTAA 3 cut(s) 750, 762, 801
TscAI CASTG 2 cut(s) 33, 963
TseFI GTSAC 3 cut(s) 83, 311, 1140
Tsp45I GTSAC 3 cut(s) 83, 311, 1140
TspDTI ATGAA 6 cut(s) 297, 678, 789, 828, 860, 1130
TspRI CASTG 2 cut(s) 33, 963
VspI ATTAAT 1 cut(s) 762
XapI RAATTY 2 cut(s) 528, 561
XbaI TCTAGA 1 cut(s) 692
XceI RCATGY 2 cut(s) 205, 971
XcmI CCANNNNNNNNNTGG 2 cut(s) 52, 238
XspI CTAG 2 cut(s) 693, 1244
ZrmI AGTACT 2 cut(s) 332, 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.