Rw7G017440

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000323
Physical Location & Seq
Reverse (-)
18238366 .. 18241675
3310 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G017440.1

Sequence Viewer

Length: 1377 bp
ATGCAACCCCTATCCCGCCACGTAGCAGTGATCGGCGCCGGCGCCGCCGGCCTCGTCGCAGCACGTGAGCTCCGGCGGGAAGGTCACACTGTCGTCGTCTTCGAGCGAGGAGACCAAATCGGTGGCACGTGGGTGTACACTCCAGAAGTGGAGTCCGACCCAATTGGTCTCCACCCAAACAGAAACATAGTCCACTCGAGCATGTACCAGTCTCTCAGGACCAACCTCCCGAGAGAGATCATGGGCTTCCGGGACTACCCATTTGCGGCCAAGGAACAGGACGAAGATGGAGACCCGAGAAGGTTTCCGGGTCATAGAGAAGTGTTGAAGTACTTGAATGGTTTTGCTAAGGACTTTGGGATATGTGAGATTGTGAGGTTTGAGAGTGAGGTGGTGTTTGTGGGTTTGGTGGAGGGTGGAAAGTGGAAGGTGAAGTCCAAGAGGAAGAGAGGTGAGGATTTGGAAGAGGTTTATGATGCTGTGGTTGTCTGTAATGGTCATTTTACTGAGCCTCGTGTGGCGCAGATTCCAGGCATCAGCTCATGGAAAGGAAAGCAAGTTCACAGCCACAATTATCGGACTCCTGAGCCATTTCGAGATCAGGTTGTAATTTTGATAGGCAGCTCAGCTAGTGCTATTGATATTTCTCGGGACATAGCTGGAGTTGCCAAAGAAGTCCACATTGCATCTAGATCTGTTGCCACTGAAACCATGGAAAAGAAGCCTGGCTATGATAACATGTGGCTTCATTCTATGATCAAAAGTGTCCATGAAGATGGTAGTGTGGTTTTCCCAGATGGAAGTGTTGTACTTGCTGACATCATTCTTCATTGCACAGGGTACCAATATCATTTCCCTTTTCTTGAAACCAATGGCATTGTAACTGTGGATGACAACCGTGTTGGGCCACTGTATAAACATATCTTTCCTCCAGCATTGGCTCCCTCACTTTCCTTTGTTGGGATACCTTTTAAGGTCGTTCCTTTTGCCATGTATGAATTTCAAAGTAAGTGGATAGCAGGTATTTTGTCGAATCGAATTGCACTTCCATCCAAAGAGGAGATGATGGAGGATGTCCAAATTTTCTGCTCATTGCAGGAAGCTTCTGGTATACCTAAACGATTCACCCATATGATAGGTGATTACCAGTTTGAATATGATGATTGGCTTGCATCTCACTGTGGGTGTCCAGTCTCTGAGGAATGGAGACAGCAAATGTGGTTGGCCACTTTTAAGAATGCCCGTCTCCGAGGACCATTGTACCAGGAAGAGTGGGATGATCACCATTTAATATTGCAAGCTCAGGAGGACTTCAGGAAATACACCTTCAATGGAGTTAGAATGATAACTGATACAAGTGACAGACTGCCCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

458

Amino Acids

51.97

Weight (kDa)

5.92

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 6 - 232 8.1e-37 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 7 - 295 2.3e-15 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 7 - 43 8.9e-08 FAD dependent oxidoreductase
HI0933_like PF03486 7 - 41 8.6e-06 HI0933-like protein Rossmann domain
FAD_binding_2 PF00890 8 - 45 3.4e-07 FAD binding domain
FAD_oxidored PF12831 8 - 76 1.5e-06 FAD dependent oxidoreductase
NAD_binding_8 PF13450 10 - 44 1e-10 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 16 - 109 3.4e-07 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 74 - 255 1.3e-12 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 249 - 361 2.9e-15 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1010
Acc65I GGTACC 1 cut(s) 840
AccB1I GGYRCC 3 cut(s) 35, 41, 840
AccI GTMKAC 1 cut(s) 1111
AciI CCGC 4 cut(s) 16, 45, 76, 266
AcoI YGGCCR 2 cut(s) 267, 1224
AcsI RAATTY 2 cut(s) 998, 1080
AcuI CTGAAG 1 cut(s) 1297
AcvI CACGTG 2 cut(s) 65, 129
AcyI GRCGYC 2 cut(s) 36, 42
AfaI GTAC 6 cut(s) 137, 206, 332, 810, 842, 1262
AfiI CCNNNNNNNGG 2 cut(s) 265, 960
AflIII ACRYGT 1 cut(s) 738
AgsI TTSAA 6 cut(s) 328, 337, 866, 1004, 1154, 1330
AjnI CCWGG 3 cut(s) 529, 724, 1263
AleI CACNNNNGTG 1 cut(s) 131
AloI GAACNNNNNNTCC 2 cut(s) 543, 575
AluBI AGCT 7 cut(s) 70, 540, 624, 629, 659, 1103, 1301
AluI AGCT 7 cut(s) 70, 540, 624, 629, 659, 1103, 1301
Alw21I GWGCWC 1 cut(s) 72
Alw26I GTCTC 7 cut(s) 105, 173, 216, 285, 1198, 1201, 1250
AlwNI CAGNNNCTG 1 cut(s) 1196
Ama87I CYCGRG 4 cut(s) 196, 229, 295, 648
AoxI GGCC 4 cut(s) 49, 267, 905, 1224
ApeKI GCWGC 2 cut(s) 59, 621
ApoI RAATTY 2 cut(s) 998, 1080
ArsI GACNNNNNNTTYG 2 cut(s) 245, 277
Asp718I GGTACC 1 cut(s) 840
AspLEI GCGC 3 cut(s) 38, 44, 523
AspS9I GGNCC 3 cut(s) 219, 905, 1253
AsuC2I CCSGG 2 cut(s) 251, 309
AsuHPI GGTGA 5 cut(s) 442, 464, 1117, 1151, 1274
AvaI CYCGRG 4 cut(s) 196, 229, 295, 648
AvaII GGWCC 2 cut(s) 219, 1253
BaeI ACNNNNGTAYC 2 cut(s) 1244, 1277
BalI TGGCCA 1 cut(s) 1226
BanI GGYRCC 3 cut(s) 35, 41, 840
BanII GRGCYC 1 cut(s) 72
BauI CACGAG 1 cut(s) 513
BbrPI CACGTG 2 cut(s) 65, 129
BbsI GAAGAC 1 cut(s) 91
Bbv12I GWGCWC 1 cut(s) 72
BbvI GCAGC 2 cut(s) 71, 633
BccI CCATC 5 cut(s) 281, 770, 791, 1057, 1060
BciT130I CCWGG 3 cut(s) 531, 726, 1265
BciVI GTATCC 1 cut(s) 957
BclI TGATCA 2 cut(s) 756, 1279
BcnI CCSGG 2 cut(s) 251, 309
BcoDI GTCTC 7 cut(s) 105, 173, 216, 285, 1198, 1201, 1250
BfaI CTAG 2 cut(s) 630, 690
BfoI RGCGCY 2 cut(s) 39, 45
BfuAI ACCTGC 1 cut(s) 1010
BfuI GTATCC 1 cut(s) 957
BglII AGATCT 1 cut(s) 692
BisI GCNGC 4 cut(s) 45, 60, 267, 622
BlpI GCTNAGC 1 cut(s) 625
BlsI GCNGC 4 cut(s) 46, 61, 268, 623
BmcAI AGTACT 1 cut(s) 332
Bme1390I CCNGG 5 cut(s) 251, 309, 531, 726, 1265
Bme18I GGWCC 2 cut(s) 219, 1253
BmeT110I CYCGRG 4 cut(s) 196, 229, 295, 648
BmgT120I GGNCC 3 cut(s) 219, 905, 1253
BmiI GGNNCC 4 cut(s) 37, 43, 842, 942
BmrFI CCNGG 5 cut(s) 251, 309, 531, 726, 1265
BmsI GCATC 4 cut(s) 466, 543, 695, 1181
BpiI GAAGAC 1 cut(s) 91
BpmI CTGGAG 3 cut(s) 126, 681, 915
Bpu10I CCTNAGC 3 cut(s) 348, 585, 1302
Bpu1102I GCTNAGC 1 cut(s) 625
BpuMI CCSGG 2 cut(s) 251, 309
BsaAI YACGTR 3 cut(s) 22, 65, 129
BsaHI GRCGYC 2 cut(s) 36, 42
BsaI GGTCTC 3 cut(s) 105, 173, 285
BsaJI CCNNGG 3 cut(s) 270, 711, 1249
BsaXI ACNNNNNCTCC 2 cut(s) 54, 84
Bsc4I CCNNNNNNNGG 2 cut(s) 265, 960
Bse118I RCCGGY 2 cut(s) 38, 47
Bse1I ACTGG 3 cut(s) 208, 1147, 1190
Bse3DI GCAATG 3 cut(s) 681, 829, 1091
BseBI CCWGG 3 cut(s) 531, 726, 1265
BseDI CCNNGG 3 cut(s) 270, 711, 1249
BseGI GGATG 4 cut(s) 895, 1049, 1078, 1282
BseLI CCNNNNNNNGG 2 cut(s) 265, 960
BseMI GCAATG 3 cut(s) 681, 829, 1091
BseMII CTCAG 6 cut(s) 229, 498, 576, 639, 1188, 1316
BseNI ACTGG 3 cut(s) 208, 1147, 1190
BseRI GAGGAG 2 cut(s) 123, 1073
BseXI GCAGC 2 cut(s) 71, 633
BshFI GGCC 4 cut(s) 51, 269, 907, 1226
BshNI GGYRCC 3 cut(s) 35, 41, 840
BsiHKAI GWGCWC 1 cut(s) 72
BsiHKCI CYCGRG 4 cut(s) 196, 229, 295, 648
BsiSI CCGG 5 cut(s) 39, 48, 73, 250, 308
BslFI GGGAC 2 cut(s) 266, 665
BslI CCNNNNNNNGG 2 cut(s) 265, 960
BsmAI GTCTC 7 cut(s) 105, 173, 216, 285, 1198, 1201, 1250
BsmBI CGTCTC 1 cut(s) 1250
BsmFI GGGAC 2 cut(s) 266, 665
BsmI GAATGC 1 cut(s) 1243
BsnI GGCC 4 cut(s) 51, 269, 907, 1226
Bso31I GGTCTC 3 cut(s) 105, 173, 285
BsoBI CYCGRG 4 cut(s) 196, 229, 295, 648
Bsp1286I GDGCHC 1 cut(s) 72
Bsp1407I TGTACA 1 cut(s) 135
Bsp143I GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
Bsp1720I GCTNAGC 1 cut(s) 625
Bsp19I CCATGG 1 cut(s) 711
BspACI CCGC 4 cut(s) 16, 45, 76, 266
BspANI GGCC 4 cut(s) 51, 269, 907, 1226
BspCNI CTCAG 6 cut(s) 228, 499, 577, 638, 1189, 1315
BspLI GGNNCC 4 cut(s) 37, 43, 842, 942
BspMI ACCTGC 1 cut(s) 1010
BspT107I GGYRCC 3 cut(s) 35, 41, 840
BspTNI GGTCTC 3 cut(s) 105, 173, 285
BsrDI GCAATG 3 cut(s) 681, 829, 1091
BsrFI RCCGGY 2 cut(s) 38, 47
BsrGI TGTACA 1 cut(s) 135
BsrI ACTGG 3 cut(s) 208, 1147, 1190
BssAI RCCGGY 2 cut(s) 38, 47
BssECI CCNNGG 3 cut(s) 270, 711, 1249
BssMI GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
BssNAI GTATAC 1 cut(s) 1112
BssNI GRCGYC 2 cut(s) 36, 42
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 2 cut(s) 270, 711
Bst1107I GTATAC 1 cut(s) 1112
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 3 cut(s) 531, 726, 1265
Bst4CI ACNGT 5 cut(s) 91, 886, 899, 912, 1181
Bst6I CTCTTC 3 cut(s) 440, 459, 1263
BstACI GRCGYC 2 cut(s) 36, 42
BstAUI TGTACA 1 cut(s) 135
BstBAI YACGTR 3 cut(s) 22, 65, 129
BstC8I GCNNGC 4 cut(s) 40, 49, 1170, 1299
BstDEI CTNAG 7 cut(s) 215, 348, 507, 585, 625, 1197, 1302
BstDSI CCRYGG 1 cut(s) 711
BstF5I GGATG 4 cut(s) 895, 1049, 1078, 1282
BstH2I RGCGCY 2 cut(s) 39, 45
BstHHI GCGC 3 cut(s) 38, 44, 523
BstKTI GATC 6 cut(s) 33, 240, 601, 695, 759, 1282
BstMAI GTCTC 7 cut(s) 105, 173, 216, 285, 1198, 1201, 1250
BstMBI GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
BstMWI GCNNNNNNNGC 3 cut(s) 44, 48, 665
BstNI CCWGG 3 cut(s) 531, 726, 1265
BstNSI RCATGY 2 cut(s) 205, 742
BstSCI CCNGG 5 cut(s) 249, 307, 529, 724, 1263
BstV1I GCAGC 2 cut(s) 71, 633
BstV2I GAAGAC 1 cut(s) 91
BstX2I RGATCY 1 cut(s) 692
BstXI CCANNNNNNTGG 2 cut(s) 122, 776
BstYI RGATCY 1 cut(s) 692
BstZ17I GTATAC 1 cut(s) 1112
BsuI GTATCC 1 cut(s) 957
BsuRI GGCC 4 cut(s) 51, 269, 907, 1226
BtgI CCRYGG 1 cut(s) 711
BtsCI GGATG 4 cut(s) 895, 1049, 1078, 1282
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 5 cut(s) 33, 87, 702, 908, 1177
BveI ACCTGC 1 cut(s) 1010
Cac8I GCNNGC 4 cut(s) 40, 49, 1170, 1299
CaiI CAGNNNCTG 1 cut(s) 1196
CfoI GCGC 3 cut(s) 38, 44, 523
Cfr10I RCCGGY 2 cut(s) 38, 47
Cfr13I GGNCC 3 cut(s) 219, 905, 1253
Csp6I GTAC 6 cut(s) 136, 205, 331, 809, 841, 1261
CspCI CAANNNNNGTGG 2 cut(s) 992, 1027
CviAII CATG 7 cut(s) 202, 241, 543, 712, 739, 770, 991
CviQI GTAC 6 cut(s) 136, 205, 331, 809, 841, 1261
DdeI CTNAG 7 cut(s) 215, 348, 507, 585, 625, 1197, 1302
DinI GGCGCC 2 cut(s) 37, 43
DpnI GATC 6 cut(s) 32, 239, 600, 694, 758, 1281
DpnII GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
EaeI YGGCCR 2 cut(s) 267, 1224
Eam1104I CTCTTC 3 cut(s) 440, 459, 1263
EarI CTCTTC 3 cut(s) 440, 459, 1263
Ecl136II GAGCTC 1 cut(s) 70
Eco130I CCWWGG 2 cut(s) 270, 711
Eco24I GRGCYC 1 cut(s) 72
Eco31I GGTCTC 3 cut(s) 105, 173, 285
Eco47I GGWCC 2 cut(s) 219, 1253
Eco53kI GAGCTC 1 cut(s) 70
Eco57I CTGAAG 1 cut(s) 1297
Eco72I CACGTG 2 cut(s) 65, 129
Eco88I CYCGRG 4 cut(s) 196, 229, 295, 648
EcoICRI GAGCTC 1 cut(s) 70
EcoRII CCWGG 3 cut(s) 529, 724, 1263
EcoT14I CCWWGG 2 cut(s) 270, 711
EcoT38I GRGCYC 1 cut(s) 72
EgeI GGCGCC 2 cut(s) 37, 43
EheI GGCGCC 2 cut(s) 37, 43
ErhI CCWWGG 2 cut(s) 270, 711
Esp3I CGTCTC 1 cut(s) 1250
FaeI CATG 7 cut(s) 205, 244, 546, 715, 742, 773, 994
FaqI GGGAC 2 cut(s) 266, 665
FatI CATG 7 cut(s) 201, 240, 542, 711, 738, 769, 990
FauI CCCGC 2 cut(s) 23, 69
FauNDI CATATG 1 cut(s) 1131
FbaI TGATCA 2 cut(s) 756, 1279
FblI GTMKAC 1 cut(s) 1111
Fnu4HI GCNGC 4 cut(s) 45, 60, 267, 622
FokI GGATG 4 cut(s) 902, 1036, 1085, 1289
FriOI GRGCYC 1 cut(s) 72
Fsp4HI GCNGC 4 cut(s) 45, 60, 267, 622
FspBI CTAG 2 cut(s) 630, 690
GlaI GCGC 3 cut(s) 37, 43, 522
GluI GCNGC 4 cut(s) 45, 60, 267, 622
GsuI CTGGAG 3 cut(s) 126, 681, 915
HaeII RGCGCY 2 cut(s) 39, 45
HaeIII GGCC 4 cut(s) 51, 269, 907, 1226
HapII CCGG 5 cut(s) 39, 48, 73, 250, 308
HhaI GCGC 3 cut(s) 38, 44, 523
Hin1I GRCGYC 2 cut(s) 36, 42
Hin1II CATG 7 cut(s) 205, 244, 546, 715, 742, 773, 994
Hin6I GCGC 3 cut(s) 36, 42, 521
HinP1I GCGC 3 cut(s) 36, 42, 521
HindIII AAGCTT 1 cut(s) 1101
HinfI GANTC 5 cut(s) 152, 526, 580, 1033, 1122
HpaII CCGG 5 cut(s) 39, 48, 73, 250, 308
HphI GGTGA 5 cut(s) 442, 464, 1117, 1151, 1274
Hpy166II GTNNAC 6 cut(s) 136, 138, 193, 562, 679, 1112
Hpy188I TCNGA 4 cut(s) 157, 579, 1198, 1250
Hpy8I GTNNAC 6 cut(s) 136, 138, 193, 562, 679, 1112
Hpy99I CGWCG 2 cut(s) 59, 98
HpyAV CCTTC 4 cut(s) 74, 294, 421, 1336
HpyCH4III ACNGT 5 cut(s) 91, 886, 899, 912, 1181
HpyCH4IV ACGT 3 cut(s) 21, 64, 128
HpyCH4V TGCA 7 cut(s) 4, 686, 834, 1043, 1096, 1172, 1297
HpyF10VI GCNNNNNNNGC 3 cut(s) 44, 48, 665
HpyF3I CTNAG 7 cut(s) 215, 348, 507, 585, 625, 1197, 1302
HpySE526I ACGT 3 cut(s) 21, 64, 128
Hsp92I GRCGYC 2 cut(s) 36, 42
Hsp92II CATG 7 cut(s) 205, 244, 546, 715, 742, 773, 994
HspAI GCGC 3 cut(s) 36, 42, 521
KasI GGCGCC 2 cut(s) 35, 41
KpnI GGTACC 1 cut(s) 844
KroI GCCGGC 2 cut(s) 38, 47
KroNI GCCGGC 2 cut(s) 40, 49
Ksp22I TGATCA 2 cut(s) 756, 1279
Kzo9I GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
LmnI GCTCC 2 cut(s) 75, 946
Lsp1109I GCAGC 2 cut(s) 71, 633
LweI GCATC 4 cut(s) 466, 543, 695, 1181
MaeI CTAG 2 cut(s) 630, 690
MaeII ACGT 3 cut(s) 21, 64, 128
MaeIII GTNAC 3 cut(s) 83, 880, 1358
MalI GATC 6 cut(s) 32, 239, 600, 694, 758, 1281
MboI GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
MboII GAAGA 7 cut(s) 91, 296, 457, 476, 785, 818, 1280
MfeI CAATTG 1 cut(s) 162
MflI RGATCY 1 cut(s) 692
MhlI GDGCHC 1 cut(s) 72
MlsI TGGCCA 1 cut(s) 1226
MluCI AATT 6 cut(s) 162, 571, 609, 998, 1038, 1080
MluNI TGGCCA 1 cut(s) 1226
Mly113I GGCGCC 2 cut(s) 36, 42
MlyI GAGTC 2 cut(s) 161, 574
MmeI TCCRAC 1 cut(s) 180
Mox20I TGGCCA 1 cut(s) 1226
MreI CGCCGGCG 1 cut(s) 38
MroNI GCCGGC 2 cut(s) 38, 47
MscI TGGCCA 1 cut(s) 1226
MseI TTAA 3 cut(s) 972, 1233, 1289
MslI CAYNNNNRTG 3 cut(s) 131, 774, 1130
Msp20I TGGCCA 1 cut(s) 1226
MspI CCGG 5 cut(s) 39, 48, 73, 250, 308
MspR9I CCNGG 5 cut(s) 251, 309, 531, 726, 1265
MunI CAATTG 1 cut(s) 162
Mva1269I GAATGC 1 cut(s) 1243
MvaI CCWGG 3 cut(s) 531, 726, 1265
MwoI GCNNNNNNNGC 3 cut(s) 44, 48, 665
NaeI GCCGGC 2 cut(s) 40, 49
NarI GGCGCC 2 cut(s) 36, 42
NciI CCSGG 2 cut(s) 251, 309
NcoI CCATGG 1 cut(s) 711
NdeI CATATG 1 cut(s) 1131
NdeII GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
NgoMIV GCCGGC 2 cut(s) 38, 47
NlaIII CATG 7 cut(s) 205, 244, 546, 715, 742, 773, 994
NlaIV GGNNCC 4 cut(s) 37, 43, 842, 942
NmuCI GTSAC 2 cut(s) 83, 1358
NspI RCATGY 2 cut(s) 205, 742
OliI CACNNNNGTG 1 cut(s) 131
PaeR7I CTCGAG 1 cut(s) 196
PciI ACATGT 1 cut(s) 738
PcsI WCGNNNNNNNCGW 1 cut(s) 99
PctI GAATGC 1 cut(s) 1243
PdiI GCCGGC 2 cut(s) 40, 49
PfeI GAWTC 3 cut(s) 526, 1033, 1122
PfoI TCCNGGA 1 cut(s) 249
PkrI GCNGC 4 cut(s) 46, 61, 268, 623
PleI GAGTC 2 cut(s) 160, 574
PluTI GGCGCC 2 cut(s) 39, 45
PmaCI CACGTG 2 cut(s) 65, 129
PmlI CACGTG 2 cut(s) 65, 129
PpsI GAGTC 2 cut(s) 160, 574
Ppu21I YACGTR 3 cut(s) 22, 65, 129
PscI ACATGT 1 cut(s) 738
Psp124BI GAGCTC 1 cut(s) 72
Psp6I CCWGG 3 cut(s) 529, 724, 1263
PspCI CACGTG 2 cut(s) 65, 129
PspGI CCWGG 3 cut(s) 529, 724, 1263
PspN4I GGNNCC 4 cut(s) 37, 43, 842, 942
PspPI GGNCC 3 cut(s) 219, 905, 1253
PspXI VCTCGAGB 1 cut(s) 196
PstNI CAGNNNCTG 1 cut(s) 1196
PsuI RGATCY 1 cut(s) 692
RsaI GTAC 6 cut(s) 137, 206, 332, 810, 842, 1262
RsaNI GTAC 6 cut(s) 136, 205, 331, 809, 841, 1261
RseI CAYNNNNRTG 3 cut(s) 131, 774, 1130
SacI GAGCTC 1 cut(s) 72
SaqAI TTAA 3 cut(s) 972, 1233, 1289
SatI GCNGC 4 cut(s) 45, 60, 267, 622
Sau3AI GATC 6 cut(s) 30, 237, 598, 692, 756, 1279
Sau96I GGNCC 3 cut(s) 219, 905, 1253
ScaI AGTACT 1 cut(s) 332
SchI GAGTC 2 cut(s) 161, 574
ScrFI CCNGG 5 cut(s) 251, 309, 531, 726, 1265
SduI GDGCHC 1 cut(s) 72
SfaNI GCATC 4 cut(s) 466, 543, 695, 1181
SfoI GGCGCC 2 cut(s) 37, 43
Sfr274I CTCGAG 1 cut(s) 196
SgrAI CRCCGGYG 1 cut(s) 38
SinI GGWCC 2 cut(s) 219, 1253
SlaI CTCGAG 1 cut(s) 196
SmiMI CAYNNNNRTG 3 cut(s) 131, 774, 1130
SmlI CTYRAG 1 cut(s) 196
SmoI CTYRAG 1 cut(s) 196
Sse9I AATT 6 cut(s) 162, 571, 609, 998, 1038, 1080
SsiI CCGC 4 cut(s) 16, 45, 76, 266
SspDI GGCGCC 2 cut(s) 35, 41
SspI AATATT 1 cut(s) 1293
SspMI CTAG 2 cut(s) 630, 690
SstI GAGCTC 1 cut(s) 72
StyD4I CCNGG 5 cut(s) 249, 307, 529, 724, 1263
StyI CCWWGG 2 cut(s) 270, 711
TaaI ACNGT 5 cut(s) 91, 886, 899, 912, 1181
TaiI ACGT 3 cut(s) 24, 67, 131
TaqI TCGA 5 cut(s) 102, 197, 595, 1031, 1036
TasI AATT 6 cut(s) 162, 571, 609, 998, 1038, 1080
TatI WGTACW 3 cut(s) 135, 330, 808
TauI GCSGC 2 cut(s) 47, 269
TfiI GAWTC 3 cut(s) 526, 1033, 1122
Tru1I TTAA 3 cut(s) 972, 1233, 1289
Tru9I TTAA 3 cut(s) 972, 1233, 1289
TscAI CASTG 5 cut(s) 33, 94, 709, 915, 1184
TseFI GTSAC 2 cut(s) 83, 1358
TseI GCWGC 2 cut(s) 59, 621
Tsp45I GTSAC 2 cut(s) 83, 1358
TspDTI ATGAA 4 cut(s) 737, 786, 818, 1011
TspRI CASTG 5 cut(s) 33, 94, 709, 915, 1184
VpaK11BI GGWCC 2 cut(s) 219, 1253
XapI RAATTY 2 cut(s) 998, 1080
XbaI TCTAGA 1 cut(s) 689
XceI RCATGY 2 cut(s) 205, 742
XcmI CCANNNNNNNNNTGG 1 cut(s) 709
XhoI CTCGAG 1 cut(s) 196
XmiI GTMKAC 1 cut(s) 1111
XspI CTAG 2 cut(s) 630, 690
ZrmI AGTACT 1 cut(s) 332
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.