Rh7AG198200

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000323
Physical Location & Seq
Reverse (-)
17881417 .. 17884382
2966 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG198200.1

Sequence Viewer

Length: 1173 bp
ATGGGGTTCCGGGACTACCCATTTGTGGTCAAGGAAGGAGATGAAGAGAGAGACCCGAGAAGGTTTCCGGGTCACGGAGAGGTGTTGAAGTACTTGAATGAGTACGCTACCGAGTTTGGGATTTATGAGGTTGTGAGGTTTGAGAGTGAGGTGGTGTCTGTGGGTTTGGTGGAGGGTGGAAAGTGGAAGGTGAAGTCCAAGAGCAAGAGAGGTGAGGTTGTGGAAGAGATTTATGATGCTGTGGTGGTCTGTAATGGACATCATACTGAGCCACGTGTAGCTCAGATTTCAGGCATCGATACATGGAAGGGGAAGCAAATTCACAGTCACAATTATCGTACTCCTGAGCCATTTAGAGATCAGGTTGTAATTTTGATAGGCAGCGCCGCTAGTGCTGTTGATATATCTCGGGAGATAGCTGGAGTTGCTAAAGAAGTCCACATTGCATCTAGATCTGTTGCTGATGAAACCATTGAAAAGCACCCTGGCTATGATAACTTGTGGCTTCACTCAATGGTAAAAGAATTCACCCATGATCAGATCATCAGAAGTGTCCATGAAGATGGTAGTGTTGTTTTCCAAGATGGTAGTGTTGTCCGTGCTGACATCATTCTTCACTGCACAGGGTACAAATATCATTTTCCATTTCTCGAAACGAATGGCATTGTGATTGTGGAAGACAATCGTGTTGAGCCACTGTACAAGCATGTCTTCCCACCTGTCTTTGCTCCTTCGCTTTCCTTTGTTGGAATACCATGGAAGGTCGCTCCTTTCTTCATGTTTGAACTTCAAGGCAAGTGGATAGCTGGTGTTTTGTCTAATCGAGTTGCACTTCCATCCCAAGAGGACATGATGGAGGATGTCAGAGCTTTCTACTCTTTACTTGAAGCTTCTGACACACCTAAGCGATACACTCATAACATTGCTGATCATCAGTTTGGATATGACGATTGGGTTGCAACTGAGTGTGGGTGCCCAATATCTGAGGAATGGAGAAAGGAAATGTACTTTGCAGCTATAGAGAACATGCTAACCAAACCAGAGACATACCGGGATGAGTGGGTCGAATATGACCATTTAGTATCGCAAGCTCACGAGGACTTCAAGAAATATGCCTTAAATGGACATATAATTCTTGATCAAAAGAAAGTGGACATGTTAATGGATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

390

Amino Acids

44.79

Weight (kDa)

5.35

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pyr_redox_3 PF13738 2 - 229 6e-15 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 21 - 153 2.3e-24 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 49 - 230 5.3e-07 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 185 - 290 3.6e-16 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 972
AciI CCGC 1 cut(s) 387
AcsI RAATTY 2 cut(s) 318, 524
AcvI CACGTG 1 cut(s) 275
AfaI GTAC 6 cut(s) 92, 104, 340, 629, 701, 1007
AfiI CCNNNNNNNGG 3 cut(s) 25, 74, 117
AflIII ACRYGT 2 cut(s) 274, 1155
AgsI TTSAA 7 cut(s) 88, 97, 476, 785, 791, 887, 1105
AjnI CCWGG 1 cut(s) 484
AluBI AGCT 7 cut(s) 281, 419, 806, 869, 890, 1016, 1091
AluI AGCT 7 cut(s) 281, 419, 806, 869, 890, 1016, 1091
Alw26I GTCTC 2 cut(s) 45, 1037
Ama87I CYCGRG 2 cut(s) 55, 408
ApeKI GCWGC 2 cut(s) 381, 1013
ApoI RAATTY 2 cut(s) 318, 524
ArsI GACNNNNNNTTYG 3 cut(s) 37, 310, 342
AspLEI GCGC 1 cut(s) 386
AsuC2I CCSGG 3 cut(s) 11, 69, 1052
AsuHPI GGTGA 3 cut(s) 202, 224, 520
AvaI CYCGRG 2 cut(s) 55, 408
BaeGI GKGCMC 1 cut(s) 977
BanI GGYRCC 1 cut(s) 972
BauI CACGAG 1 cut(s) 1094
BbrPI CACGTG 1 cut(s) 275
BbsI GAAGAC 2 cut(s) 684, 703
BbvI GCAGC 2 cut(s) 393, 1025
BccI CCATC 4 cut(s) 557, 578, 844, 847
BcgI CGANNNNNNTGC 2 cut(s) 938, 972
BciT130I CCWGG 1 cut(s) 486
BclI TGATCA 3 cut(s) 535, 928, 1138
BcnI CCSGG 3 cut(s) 11, 69, 1052
BcoDI GTCTC 2 cut(s) 45, 1037
BfaI CTAG 2 cut(s) 390, 450
BfmI CTRYAG 1 cut(s) 1017
BfoI RGCGCY 1 cut(s) 387
BglII AGATCT 1 cut(s) 452
BisI GCNGC 3 cut(s) 382, 387, 1014
BlsI GCNGC 3 cut(s) 383, 388, 1015
BmcAI AGTACT 1 cut(s) 92
Bme1390I CCNGG 4 cut(s) 11, 69, 486, 1052
BmeT110I CYCGRG 2 cut(s) 55, 408
BmiI GGNNCC 2 cut(s) 8, 974
BmrFI CCNGG 4 cut(s) 11, 69, 486, 1052
BmsI GCATC 3 cut(s) 226, 303, 455
BpiI GAAGAC 2 cut(s) 684, 703
BpmI CTGGAG 1 cut(s) 441
Bpu10I CCTNAGC 2 cut(s) 345, 903
BpuMI CCSGG 3 cut(s) 11, 69, 1052
Bsa29I ATCGAT 1 cut(s) 297
BsaAI YACGTR 1 cut(s) 275
BsaI GGTCTC 1 cut(s) 45
BsaJI CCNNGG 2 cut(s) 484, 755
Bsc4I CCNNNNNNNGG 3 cut(s) 25, 74, 117
Bse3DI GCAATG 2 cut(s) 441, 921
BseBI CCWGG 1 cut(s) 486
BseCI ATCGAT 1 cut(s) 297
BseDI CCNNGG 2 cut(s) 484, 755
BseGI GGATG 3 cut(s) 836, 865, 1060
BseLI CCNNNNNNNGG 3 cut(s) 25, 74, 117
BseMI GCAATG 2 cut(s) 441, 921
BseMII CTCAG 5 cut(s) 258, 296, 336, 954, 975
BseSI GKGCMC 1 cut(s) 977
BseXI GCAGC 2 cut(s) 393, 1025
BsgI GTGCAG 1 cut(s) 604
BshNI GGYRCC 1 cut(s) 972
BshVI ATCGAT 1 cut(s) 297
BsiHKCI CYCGRG 2 cut(s) 55, 408
BsiSI CCGG 3 cut(s) 10, 68, 1051
BslFI GGGAC 1 cut(s) 26
BslI CCNNNNNNNGG 3 cut(s) 25, 74, 117
BsmAI GTCTC 2 cut(s) 45, 1037
BsmFI GGGAC 1 cut(s) 26
Bso31I GGTCTC 1 cut(s) 45
BsoBI CYCGRG 2 cut(s) 55, 408
Bsp1286I GDGCHC 1 cut(s) 977
Bsp1407I TGTACA 1 cut(s) 699
Bsp143I GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
Bsp19I CCATGG 1 cut(s) 755
BspACI CCGC 1 cut(s) 387
BspCNI CTCAG 5 cut(s) 259, 295, 337, 955, 976
BspDI ATCGAT 1 cut(s) 297
BspLI GGNNCC 2 cut(s) 8, 974
BspT107I GGYRCC 1 cut(s) 972
BspTNI GGTCTC 1 cut(s) 45
BsrDI GCAATG 2 cut(s) 441, 921
BsrGI TGTACA 1 cut(s) 699
BssECI CCNNGG 2 cut(s) 484, 755
BssMI GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
BssSI CACGAG 1 cut(s) 1094
BssT1I CCWWGG 1 cut(s) 755
Bst2BI CACGAG 1 cut(s) 1094
Bst2UI CCWGG 1 cut(s) 486
Bst4CI ACNGT 2 cut(s) 326, 699
Bst6I CTCTTC 2 cut(s) 39, 219
BstAUI TGTACA 1 cut(s) 699
BstBAI YACGTR 1 cut(s) 275
BstC8I GCNNGC 1 cut(s) 1089
BstDEI CTNAG 6 cut(s) 267, 282, 345, 903, 963, 984
BstDSI CCRYGG 1 cut(s) 755
BstF5I GGATG 3 cut(s) 836, 865, 1060
BstH2I RGCGCY 1 cut(s) 387
BstHHI GCGC 1 cut(s) 386
BstKTI GATC 6 cut(s) 361, 455, 538, 543, 931, 1141
BstMAI GTCTC 2 cut(s) 45, 1037
BstMBI GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
BstMWI GCNNNNNNNGC 2 cut(s) 392, 425
BstNI CCWGG 1 cut(s) 486
BstNSI RCATGY 3 cut(s) 710, 1030, 1159
BstSCI CCNGG 4 cut(s) 9, 67, 484, 1050
BstSFI CTRYAG 1 cut(s) 1017
BstSLI GKGCMC 1 cut(s) 977
BstV1I GCAGC 2 cut(s) 393, 1025
BstV2I GAAGAC 2 cut(s) 684, 703
BstX2I RGATCY 1 cut(s) 452
BstXI CCANNNNNNTGG 1 cut(s) 563
BstYI RGATCY 1 cut(s) 452
Bsu15I ATCGAT 1 cut(s) 297
BsuTUI ATCGAT 1 cut(s) 297
BtgI CCRYGG 1 cut(s) 755
BtsCI GGATG 3 cut(s) 836, 865, 1060
BtsI GCAGTG 1 cut(s) 616
BtsIMutI CAGTG 2 cut(s) 616, 695
Cac8I GCNNGC 1 cut(s) 1089
CfoI GCGC 1 cut(s) 386
ClaI ATCGAT 1 cut(s) 297
Csp6I GTAC 6 cut(s) 91, 103, 339, 628, 700, 1006
CspCI CAANNNNNGTGG 2 cut(s) 779, 814
CviAII CATG 9 cut(s) 303, 533, 557, 707, 756, 778, 850, 1027, 1156
CviQI GTAC 6 cut(s) 91, 103, 339, 628, 700, 1006
DdeI CTNAG 6 cut(s) 267, 282, 345, 903, 963, 984
DpnI GATC 6 cut(s) 360, 454, 537, 542, 930, 1140
DpnII GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
Eam1104I CTCTTC 2 cut(s) 39, 219
EarI CTCTTC 2 cut(s) 39, 219
Eco130I CCWWGG 1 cut(s) 755
Eco31I GGTCTC 1 cut(s) 45
Eco72I CACGTG 1 cut(s) 275
Eco88I CYCGRG 2 cut(s) 55, 408
EcoRI GAATTC 1 cut(s) 524
EcoRII CCWGG 1 cut(s) 484
EcoT14I CCWWGG 1 cut(s) 755
ErhI CCWWGG 1 cut(s) 755
FaeI CATG 9 cut(s) 306, 536, 560, 710, 759, 781, 853, 1030, 1159
FalI AAGNNNNNCTT 2 cut(s) 695, 727
FaqI GGGAC 1 cut(s) 26
FatI CATG 9 cut(s) 302, 532, 556, 706, 755, 777, 849, 1026, 1155
FbaI TGATCA 3 cut(s) 535, 928, 1138
Fnu4HI GCNGC 3 cut(s) 382, 387, 1014
FokI GGATG 3 cut(s) 823, 872, 1067
Fsp4HI GCNGC 3 cut(s) 382, 387, 1014
FspBI CTAG 2 cut(s) 390, 450
GlaI GCGC 1 cut(s) 385
GluI GCNGC 3 cut(s) 382, 387, 1014
GsuI CTGGAG 1 cut(s) 441
HaeII RGCGCY 1 cut(s) 387
HapII CCGG 3 cut(s) 10, 68, 1051
HhaI GCGC 1 cut(s) 386
Hin1II CATG 9 cut(s) 306, 536, 560, 710, 759, 781, 853, 1030, 1159
Hin6I GCGC 1 cut(s) 384
HinP1I GCGC 1 cut(s) 384
HindIII AAGCTT 1 cut(s) 888
HpaII CCGG 3 cut(s) 10, 68, 1051
HphI GGTGA 3 cut(s) 202, 224, 520
Hpy166II GTNNAC 2 cut(s) 439, 1153
Hpy188I TCNGA 6 cut(s) 285, 540, 548, 866, 895, 985
Hpy188III TCNNGA 7 cut(s) 344, 410, 450, 650, 1094, 1105, 1136
Hpy8I GTNNAC 2 cut(s) 439, 1153
HpyAV CCTTC 6 cut(s) 29, 54, 181, 301, 741, 754
HpyCH4III ACNGT 2 cut(s) 326, 699
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 5 cut(s) 446, 621, 830, 959, 1013
HpyF10VI GCNNNNNNNGC 2 cut(s) 392, 425
HpyF3I CTNAG 6 cut(s) 267, 282, 345, 903, 963, 984
HpySE526I ACGT 1 cut(s) 274
Hsp92II CATG 9 cut(s) 306, 536, 560, 710, 759, 781, 853, 1030, 1159
HspAI GCGC 1 cut(s) 384
Ksp22I TGATCA 3 cut(s) 535, 928, 1138
Kzo9I GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
LmnI GCTCC 2 cut(s) 733, 772
Lsp1109I GCAGC 2 cut(s) 393, 1025
LweI GCATC 3 cut(s) 226, 303, 455
MaeI CTAG 2 cut(s) 390, 450
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 2 cut(s) 71, 326
MalI GATC 6 cut(s) 360, 454, 537, 542, 930, 1140
MboI GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
MboII GAAGA 7 cut(s) 56, 236, 572, 605, 689, 703, 766
MflI RGATCY 1 cut(s) 452
MhlI GDGCHC 1 cut(s) 977
MluCI AATT 5 cut(s) 318, 331, 369, 524, 1131
MmeI TCCRAC 1 cut(s) 727
MseI TTAA 2 cut(s) 1118, 1160
MslI CAYNNNNRTG 2 cut(s) 561, 1160
MspI CCGG 3 cut(s) 10, 68, 1051
MspR9I CCNGG 4 cut(s) 11, 69, 486, 1052
MvaI CCWGG 1 cut(s) 486
MwoI GCNNNNNNNGC 2 cut(s) 392, 425
NciI CCSGG 3 cut(s) 11, 69, 1052
NcoI CCATGG 1 cut(s) 755
NdeII GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
NlaIII CATG 9 cut(s) 306, 536, 560, 710, 759, 781, 853, 1030, 1159
NlaIV GGNNCC 2 cut(s) 8, 974
NmuCI GTSAC 2 cut(s) 71, 326
NspI RCATGY 3 cut(s) 710, 1030, 1159
PciI ACATGT 1 cut(s) 1155
PfoI TCCNGGA 1 cut(s) 9
PkrI GCNGC 3 cut(s) 383, 388, 1015
PmaCI CACGTG 1 cut(s) 275
PmlI CACGTG 1 cut(s) 275
Ppu21I YACGTR 1 cut(s) 275
PscI ACATGT 1 cut(s) 1155
Psp6I CCWGG 1 cut(s) 484
PspCI CACGTG 1 cut(s) 275
PspGI CCWGG 1 cut(s) 484
PspN4I GGNNCC 2 cut(s) 8, 974
PsuI RGATCY 1 cut(s) 452
RsaI GTAC 6 cut(s) 92, 104, 340, 629, 701, 1007
RsaNI GTAC 6 cut(s) 91, 103, 339, 628, 700, 1006
RseI CAYNNNNRTG 2 cut(s) 561, 1160
SaqAI TTAA 2 cut(s) 1118, 1160
SatI GCNGC 3 cut(s) 382, 387, 1014
Sau3AI GATC 6 cut(s) 358, 452, 535, 540, 928, 1138
ScaI AGTACT 1 cut(s) 92
ScrFI CCNGG 4 cut(s) 11, 69, 486, 1052
SduI GDGCHC 1 cut(s) 977
SfaNI GCATC 3 cut(s) 226, 303, 455
SfcI CTRYAG 1 cut(s) 1017
SmiMI CAYNNNNRTG 2 cut(s) 561, 1160
Sse9I AATT 5 cut(s) 318, 331, 369, 524, 1131
SsiI CCGC 1 cut(s) 387
SspMI CTAG 2 cut(s) 390, 450
StyD4I CCNGG 4 cut(s) 9, 67, 484, 1050
StyI CCWWGG 1 cut(s) 755
TaaI ACNGT 2 cut(s) 326, 699
TaiI ACGT 1 cut(s) 277
TaqI TCGA 4 cut(s) 297, 651, 823, 1065
TasI AATT 5 cut(s) 318, 331, 369, 524, 1131
TatI WGTACW 3 cut(s) 90, 699, 1005
TauI GCSGC 1 cut(s) 389
Tru1I TTAA 2 cut(s) 1118, 1160
Tru9I TTAA 2 cut(s) 1118, 1160
TscAI CASTG 2 cut(s) 623, 702
TseFI GTSAC 2 cut(s) 71, 326
TseI GCWGC 2 cut(s) 381, 1013
Tsp45I GTSAC 2 cut(s) 71, 326
TspDTI ATGAA 4 cut(s) 57, 480, 573, 766
TspGWI ACGGA 2 cut(s) 90, 587
TspRI CASTG 2 cut(s) 623, 702
XapI RAATTY 2 cut(s) 318, 524
XbaI TCTAGA 1 cut(s) 449
XceI RCATGY 3 cut(s) 710, 1030, 1159
XspI CTAG 2 cut(s) 390, 450
ZrmI AGTACT 1 cut(s) 92
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.