Rh7AG199100

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000323
Physical Location & Seq
Reverse (-)
18004502 .. 18006745
2244 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG199100.1

Sequence Viewer

Length: 1176 bp
ATGTACCAGTCTCTGAGGACTAACCTCCCCAGAGAGATCATGGGGTTTCGGGACTACCCATTTGCGGCAAAGGAAGAAGATGAAGAGAGAGACCCCAGAAGGTTTCCGGGTCACAGAGAGGTGTTGAAGTACTTGAATGACTTCGCCGGCGAGTTTGGGATTTGTGAGATGGTGAGGTTTGAGACTGAGGTGGTGTTCGTGGGTTTGGTGGAGGGTGGCAAGTGGATAGTGAAGTCCAAGAGCAAGACAAGTGATGAGGGTTTGGAAGAGATTTATGATGCTGTGGTCGTTTGTTGTGGGCATTATACTCAGCCTCGTGTAGCAGAAATTTCAGGTATCACTACATGGAAAGGGCGGCAAATTCACAGCCACAACTATCGAACTCCTGAGCCGTTTCGAGATCAGGTTGTAATTTTGATAGGGAGCTCCAGTAGTGCTACTGATATCTATCGGGACATCGCTGGAGTTGCCAAAGAGGTTCACATTTCATCTAGATCTATTGCTTCCGAAACCAAAGAGAAGAAGCCTCAGTTTGATATGATGCGGCTTAACGCTATGATTAATAGTGGCTATGAAAACATGTGGGTTCGCTCTAAGATTAAAAGTGTCCATGAAGATGGTAGTGTTGTTTTCATAGATGGGAGTGTTGTCGTCGCTGACACCATTCTTCATTGCACAGGGTACAAATATCATTTCCCTTTTCTTAAAACCAATGGCATTGTAACCGTGGATGGAGATGACAACCGTGTTGGCCCACTGTTCAAGCATGTCTTCCCGCCTGCCTTGGCACCGTCGCTTTCTTTTGTTGGGGTACCATGGAAGACCGTTCCTTTCCCCAATTTTGAACTTCAAAGCAAGTGGATAGCAGGAGTTTTGTCGAATCGAATTGCGCTTCCATCCAAAGAGGAGATGATGAAGGATGTCAAAGCTTACTACTCGTCACTTGAAGCTTCTGGCAAACCTACACGACACACTCATGACATTTTTGATTATCGGGGTGAATATGCTGATTGGCTTGCGGTACAATGTGGGTCTCCAGTCCTAGAAGAATGGAGAGAACAAATGATGTTGACAGTAGCAAAGAATTGGTTAGTCCGACCCAAGACATATCAAGATGAGTGGGATGATAACCATTTAGTACTGCAAGCTTATGAGAGCTTCAAGAATGGAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

391

Amino Acids

44.67

Weight (kDa)

5.99

Isoelectric Point (pI)

37.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 1 - 166 7e-26 Flavin-binding monooxygenase-like
Pyr_redox_3 PF13738 7 - 242 3.5e-15 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 193 - 320 1.5e-15 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 811
AccB1I GGYRCC 2 cut(s) 787, 811
AciI CCGC 5 cut(s) 65, 355, 544, 776, 1019
AcsI RAATTY 2 cut(s) 327, 360
AfaI GTAC 6 cut(s) 5, 131, 683, 813, 1023, 1140
AfiI CCNNNNNNNGG 1 cut(s) 64
AflIII ACRYGT 1 cut(s) 579
AgsI TTSAA 7 cut(s) 127, 136, 763, 845, 851, 947, 1162
AluBI AGCT 5 cut(s) 426, 929, 950, 1148, 1158
AluI AGCT 5 cut(s) 426, 929, 950, 1148, 1158
Alw21I GWGCWC 1 cut(s) 428
Alw26I GTCTC 4 cut(s) 15, 84, 176, 1038
AlwNI CAGNNNCTG 1 cut(s) 13
AoxI GGCC 1 cut(s) 751
ApoI RAATTY 2 cut(s) 327, 360
ArsI GACNNNNNNTTYG 2 cut(s) 44, 76
AseI ATTAAT 1 cut(s) 561
Asp700I GAANNNNTTC 1 cut(s) 140
Asp718I GGTACC 1 cut(s) 811
AspLEI GCGC 1 cut(s) 892
AspS9I GGNCC 1 cut(s) 752
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 2 cut(s) 184, 1010
BanI GGYRCC 2 cut(s) 787, 811
BanII GRGCYC 1 cut(s) 428
BauI CACGAG 1 cut(s) 315
BbsI GAAGAC 2 cut(s) 763, 827
Bbv12I GWGCWC 1 cut(s) 428
BccI CCATC 5 cut(s) 163, 611, 632, 725, 904
BceAI ACGGC 1 cut(s) 376
BcnI CCSGG 1 cut(s) 108
BcoDI GTCTC 4 cut(s) 15, 84, 176, 1038
BfaI CTAG 2 cut(s) 492, 1043
BglII AGATCT 1 cut(s) 494
BisI GCNGC 3 cut(s) 66, 356, 545
BlsI GCNGC 3 cut(s) 67, 357, 546
BmcAI AGTACT 2 cut(s) 131, 1140
Bme1390I CCNGG 1 cut(s) 108
BmgT120I GGNCC 1 cut(s) 752
BmiI GGNNCC 2 cut(s) 789, 813
BmrFI CCNGG 1 cut(s) 108
BmsI GCATC 2 cut(s) 268, 531
BpiI GAAGAC 2 cut(s) 763, 827
BpmI CTGGAG 3 cut(s) 412, 483, 1020
Bpu10I CCTNAGC 1 cut(s) 387
BpuMI CCSGG 1 cut(s) 108
BsaBI GATNNNNATC 1 cut(s) 447
BsaI GGTCTC 2 cut(s) 84, 1038
BsaJI CCNNGG 3 cut(s) 726, 783, 815
BsaXI ACNNNNNCTCC 2 cut(s) 415, 445
Bsc4I CCNNNNNNNGG 1 cut(s) 64
Bse118I RCCGGY 1 cut(s) 146
Bse1I ACTGG 3 cut(s) 7, 429, 1037
Bse3DI GCAATG 1 cut(s) 670
Bse8I GATNNNNATC 1 cut(s) 447
BseDI CCNNGG 3 cut(s) 726, 783, 815
BseGI GGATG 4 cut(s) 736, 896, 925, 1129
BseJI GATNNNNATC 1 cut(s) 447
BseLI CCNNNNNNNGG 1 cut(s) 64
BseMI GCAATG 1 cut(s) 670
BseMII CTCAG 5 cut(s) 5, 177, 323, 378, 542
BseNI ACTGG 3 cut(s) 7, 429, 1037
BseRI GAGGAG 1 cut(s) 920
BshFI GGCC 1 cut(s) 753
BshNI GGYRCC 2 cut(s) 787, 811
BsiHKAI GWGCWC 1 cut(s) 428
BsiSI CCGG 2 cut(s) 107, 147
BslFI GGGAC 2 cut(s) 65, 467
BslI CCNNNNNNNGG 1 cut(s) 64
BsmAI GTCTC 4 cut(s) 15, 84, 176, 1038
BsmFI GGGAC 2 cut(s) 65, 467
BsnI GGCC 1 cut(s) 753
Bso31I GGTCTC 2 cut(s) 84, 1038
Bsp1286I GDGCHC 1 cut(s) 428
Bsp143I GATC 3 cut(s) 36, 400, 494
Bsp19I CCATGG 1 cut(s) 815
BspACI CCGC 5 cut(s) 65, 355, 544, 776, 1019
BspANI GGCC 1 cut(s) 753
BspCNI CTCAG 5 cut(s) 6, 178, 322, 379, 541
BspHI TCATGA 1 cut(s) 976
BspLI GGNNCC 2 cut(s) 789, 813
BspT107I GGYRCC 2 cut(s) 787, 811
BspTNI GGTCTC 2 cut(s) 84, 1038
BsrDI GCAATG 1 cut(s) 670
BsrFI RCCGGY 1 cut(s) 146
BsrI ACTGG 3 cut(s) 7, 429, 1037
BssAI RCCGGY 1 cut(s) 146
BssECI CCNNGG 3 cut(s) 726, 783, 815
BssMI GATC 3 cut(s) 36, 400, 494
BssSI CACGAG 1 cut(s) 315
BssT1I CCWWGG 2 cut(s) 783, 815
Bst2BI CACGAG 1 cut(s) 315
Bst4CI ACNGT 6 cut(s) 727, 746, 759, 792, 826, 1075
Bst6I CTCTTC 2 cut(s) 78, 261
BstC8I GCNNGC 4 cut(s) 148, 780, 1017, 1146
BstDEI CTNAG 6 cut(s) 14, 186, 309, 387, 528, 594
BstDSI CCRYGG 2 cut(s) 726, 815
BstF5I GGATG 4 cut(s) 736, 896, 925, 1129
BstHHI GCGC 1 cut(s) 892
BstKTI GATC 3 cut(s) 39, 403, 497
BstMAI GTCTC 4 cut(s) 15, 84, 176, 1038
BstMBI GATC 3 cut(s) 36, 400, 494
BstMWI GCNNNNNNNGC 1 cut(s) 467
BstNSI RCATGY 2 cut(s) 583, 770
BstSCI CCNGG 1 cut(s) 106
BstV2I GAAGAC 2 cut(s) 763, 827
BstX2I RGATCY 1 cut(s) 494
BstXI CCANNNNNNTGG 1 cut(s) 617
BstYI RGATCY 1 cut(s) 494
BsuRI GGCC 1 cut(s) 753
BtgI CCRYGG 2 cut(s) 726, 815
BtgZI GCGATG 1 cut(s) 442
BtsCI GGATG 4 cut(s) 736, 896, 925, 1129
BtsIMutI CAGTG 1 cut(s) 755
Cac8I GCNNGC 4 cut(s) 148, 780, 1017, 1146
CaiI CAGNNNCTG 1 cut(s) 13
CciI TCATGA 1 cut(s) 976
CfoI GCGC 1 cut(s) 892
Cfr10I RCCGGY 1 cut(s) 146
Cfr13I GGNCC 1 cut(s) 752
Csp6I GTAC 6 cut(s) 4, 130, 682, 812, 1022, 1139
CspCI CAANNNNNGTGG 4 cut(s) 839, 874, 1100, 1135
CviAII CATG 7 cut(s) 40, 345, 580, 611, 767, 816, 977
CviQI GTAC 6 cut(s) 4, 130, 682, 812, 1022, 1139
DdeI CTNAG 6 cut(s) 14, 186, 309, 387, 528, 594
DpnI GATC 3 cut(s) 38, 402, 496
DpnII GATC 3 cut(s) 36, 400, 494
Eam1104I CTCTTC 2 cut(s) 78, 261
EarI CTCTTC 2 cut(s) 78, 261
Ecl136II GAGCTC 1 cut(s) 426
Eco130I CCWWGG 2 cut(s) 783, 815
Eco24I GRGCYC 1 cut(s) 428
Eco31I GGTCTC 2 cut(s) 84, 1038
Eco32I GATATC 1 cut(s) 445
Eco53kI GAGCTC 1 cut(s) 426
EcoICRI GAGCTC 1 cut(s) 426
EcoRV GATATC 1 cut(s) 445
EcoT14I CCWWGG 2 cut(s) 783, 815
EcoT38I GRGCYC 1 cut(s) 428
ErhI CCWWGG 2 cut(s) 783, 815
FaeI CATG 7 cut(s) 43, 348, 583, 614, 770, 819, 980
FalI AAGNNNNNCTT 2 cut(s) 755, 787
FaqI GGGAC 2 cut(s) 65, 467
FatI CATG 7 cut(s) 39, 344, 579, 610, 766, 815, 976
FauI CCCGC 1 cut(s) 783
Fnu4HI GCNGC 3 cut(s) 66, 356, 545
FokI GGATG 4 cut(s) 743, 883, 932, 1136
FriOI GRGCYC 1 cut(s) 428
Fsp4HI GCNGC 3 cut(s) 66, 356, 545
FspBI CTAG 2 cut(s) 492, 1043
GlaI GCGC 1 cut(s) 891
GluI GCNGC 3 cut(s) 66, 356, 545
GsuI CTGGAG 3 cut(s) 412, 483, 1020
HaeIII GGCC 1 cut(s) 753
HapII CCGG 2 cut(s) 107, 147
HhaI GCGC 1 cut(s) 892
Hin1II CATG 7 cut(s) 43, 348, 583, 614, 770, 819, 980
Hin6I GCGC 1 cut(s) 890
HinP1I GCGC 1 cut(s) 890
HincII GTYRAC 1 cut(s) 1071
HindII GTYRAC 1 cut(s) 1071
HindIII AAGCTT 3 cut(s) 927, 948, 1146
HinfI GANTC 1 cut(s) 880
HpaII CCGG 2 cut(s) 107, 147
HphI GGTGA 2 cut(s) 184, 1010
Hpy166II GTNNAC 2 cut(s) 481, 1071
Hpy188I TCNGA 3 cut(s) 15, 508, 1097
Hpy188III TCNNGA 8 cut(s) 50, 386, 398, 452, 492, 977, 1112, 1162
Hpy8I GTNNAC 2 cut(s) 481, 1071
Hpy99I CGWCG 2 cut(s) 656, 796
HpyAV CCTTC 2 cut(s) 93, 910
HpyCH4III ACNGT 6 cut(s) 727, 746, 759, 792, 826, 1075
HpyCH4V TGCA 2 cut(s) 675, 1144
HpyF10VI GCNNNNNNNGC 1 cut(s) 467
HpyF3I CTNAG 6 cut(s) 14, 186, 309, 387, 528, 594
Hsp92II CATG 7 cut(s) 43, 348, 583, 614, 770, 819, 980
HspAI GCGC 1 cut(s) 890
KpnI GGTACC 1 cut(s) 815
KroI GCCGGC 1 cut(s) 146
KroNI GCCGGC 1 cut(s) 148
Kzo9I GATC 3 cut(s) 36, 400, 494
LmnI GCTCC 2 cut(s) 423, 431
LweI GCATC 2 cut(s) 268, 531
MaeI CTAG 2 cut(s) 492, 1043
MaeIII GTNAC 3 cut(s) 110, 721, 939
MalI GATC 3 cut(s) 38, 402, 496
MboI GATC 3 cut(s) 36, 400, 494
MflI RGATCY 1 cut(s) 494
MhlI GDGCHC 1 cut(s) 428
MluCI AATT 6 cut(s) 327, 360, 411, 838, 885, 1084
MmeI TCCRAC 1 cut(s) 1120
MreI CGCCGGCG 1 cut(s) 146
MroNI GCCGGC 1 cut(s) 146
MroXI GAANNNNTTC 1 cut(s) 140
MseI TTAA 4 cut(s) 549, 561, 600, 705
MslI CAYNNNNRTG 2 cut(s) 615, 975
MspI CCGG 2 cut(s) 107, 147
MspR9I CCNGG 1 cut(s) 108
MwoI GCNNNNNNNGC 1 cut(s) 467
NaeI GCCGGC 1 cut(s) 148
NciI CCSGG 1 cut(s) 108
NcoI CCATGG 1 cut(s) 815
NdeII GATC 3 cut(s) 36, 400, 494
NgoMIV GCCGGC 1 cut(s) 146
NlaIII CATG 7 cut(s) 43, 348, 583, 614, 770, 819, 980
NlaIV GGNNCC 2 cut(s) 789, 813
NmuCI GTSAC 2 cut(s) 110, 939
NspI RCATGY 2 cut(s) 583, 770
PagI TCATGA 1 cut(s) 976
PciI ACATGT 1 cut(s) 579
PdiI GCCGGC 1 cut(s) 148
PdmI GAANNNNTTC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 880
PkrI GCNGC 3 cut(s) 67, 357, 546
PscI ACATGT 1 cut(s) 579
PshBI ATTAAT 1 cut(s) 561
Psp124BI GAGCTC 1 cut(s) 428
PspN4I GGNNCC 2 cut(s) 789, 813
PspPI GGNCC 1 cut(s) 752
PstNI CAGNNNCTG 1 cut(s) 13
PsuI RGATCY 1 cut(s) 494
RsaI GTAC 6 cut(s) 5, 131, 683, 813, 1023, 1140
RsaNI GTAC 6 cut(s) 4, 130, 682, 812, 1022, 1139
RseI CAYNNNNRTG 2 cut(s) 615, 975
SacI GAGCTC 1 cut(s) 428
SaqAI TTAA 4 cut(s) 549, 561, 600, 705
SatI GCNGC 3 cut(s) 66, 356, 545
Sau3AI GATC 3 cut(s) 36, 400, 494
Sau96I GGNCC 1 cut(s) 752
ScaI AGTACT 2 cut(s) 131, 1140
ScrFI CCNGG 1 cut(s) 108
SduI GDGCHC 1 cut(s) 428
SfaNI GCATC 2 cut(s) 268, 531
SgrAI CRCCGGYG 1 cut(s) 146
SmiMI CAYNNNNRTG 2 cut(s) 615, 975
Sse9I AATT 6 cut(s) 327, 360, 411, 838, 885, 1084
SsiI CCGC 5 cut(s) 65, 355, 544, 776, 1019
SspMI CTAG 2 cut(s) 492, 1043
SstI GAGCTC 1 cut(s) 428
StyD4I CCNGG 1 cut(s) 106
StyI CCWWGG 2 cut(s) 783, 815
TaaI ACNGT 6 cut(s) 727, 746, 759, 792, 826, 1075
TaqI TCGA 4 cut(s) 379, 397, 878, 883
TasI AATT 6 cut(s) 327, 360, 411, 838, 885, 1084
TatI WGTACW 2 cut(s) 129, 1138
TauI GCSGC 3 cut(s) 68, 358, 547
TfiI GAWTC 1 cut(s) 880
Tru1I TTAA 4 cut(s) 549, 561, 600, 705
Tru9I TTAA 4 cut(s) 549, 561, 600, 705
TscAI CASTG 1 cut(s) 762
TseFI GTSAC 2 cut(s) 110, 939
Tsp45I GTSAC 2 cut(s) 110, 939
TspDTI ATGAA 7 cut(s) 96, 477, 588, 622, 627, 659, 929
TspRI CASTG 1 cut(s) 762
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 2 cut(s) 327, 360
XbaI TCTAGA 1 cut(s) 491
XceI RCATGY 2 cut(s) 583, 770
XcmI CCANNNNNNNNNTGG 1 cut(s) 37
XmnI GAANNNNTTC 1 cut(s) 140
XspI CTAG 2 cut(s) 492, 1043
ZrmI AGTACT 2 cut(s) 131, 1140
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.