Rroxscaffold_3G00254600

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000323
Physical Location & Seq
Forward (+)
48844710 .. 48847470
2761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00254600.1

Sequence Viewer

Length: 1236 bp
ATGCAACCGCCGACCACCCGCAACGTGGCGGTGATCGGCGCCGGAGCCGCCGGCCTGGTCGCCGCTCGCGAGCTCCGGCTAGAAGGCCACAAAGTCGTGGTCTTTGAGCGAGGAGACCAGGTGGGTGGCACCTGGGTCTACACTCCCAAGGTCGACTCCGACCCAATTGGGCTCGACCCAGATAGGACCGTGGTCCACTCGAGTATGTACCAGTCGCTCAGGACCAACCTGCCGAGAGAGGTCATGGGGTTCCGGGACTACCCATTTGACTTTGCTAAGGACTTTGGGATTTATGGGATTGTGAGGTTTGAGACGGAGGTGGTGTTTGTGGGTTTGGTGGAGGGTGGGAAATGGAAGGTGAAGACTAAGAGTAAGAGAGGTGAGGATTTTGATGAGGTTTATGATGCTGTGGTTGTATGTAATGGTCATTATACTGAGCCTCGCATTGCCCAAATTCCAGGCATTGATACATGGAAAGGGAAGCAAATTCACAGCCATAATTATCGTACGCCTGAGCCATATCGAGACCAGGTTGTAATCTTAATAGGGAGCTCTGCTAGTGCTGTTGATATTTCTCGGGACATAGCTGGAGTTGCCAAAGAAGTCCACATTGCATCTAGATCTCTTCCTGATGAAACCTTTGAAAAGATGCCTGGCTATGATAACGTGTGGCTTCATTCTATGATCAAAAGTCTCAATGAAGATGGTAGTGCCATTTTCCCAGATGGGAGTGTACATTTACGATTTCCCTTTTTGGAAACCAATGGCACCGTGACTATGGATGACAACTGTGTGGGGCCACTATACAAGCATGTCTTCCCACCAGCCTTGGCTCCGTCACTATCCTTTGTTGGGTTACCATGGAAGGTTGTTCCTTTCCCCTTGTTCGAATTACAAAGCAAGTGGATAGCAGGTCTTTTATCTACTCGAATTCCACTTCCATCTGAAGAGGAGATGATGGAGGATGTCAGAGCATTCTACAGTTTACTTGAAGCTTCTGGCGTACCTAAACGATACACTCATAACATGGGTGATTATCAGTTTGAATATGATGACTGGCTTGCTGCTCAATGTGGTTCTCCAGTATCTGAAGAATGGAGAAAGCAAATGTACTTGGCAGTTTCAAAGAATAGGCGTGCCCGACCAGAGAGATACCGGGATGAGTGGGAAGATGACCATTTAGTATTGCAAGCTCGTGAAGACTTCAAGAAATACACCTCAGTCATGAATAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

411

Amino Acids

46.59

Weight (kDa)

5.64

Isoelectric Point (pI)

39.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FMO-like PF00743 7 - 208 4.4e-29 Flavin-binding monooxygenase-like
Pyr_redox_2 PF07992 8 - 205 1.2e-13 Pyridine nucleotide-disulphide oxidoreductase
DAO PF01266 9 - 44 1.8e-07 FAD dependent oxidoreductase
FAD_binding_2 PF00890 9 - 46 4.8e-07 FAD binding domain
NAD_binding_8 PF13450 11 - 45 5.6e-10 NAD(P)-binding Rossmann-like domain
Amino_oxidase PF01593 17 - 87 7.5e-07 Flavin containing amine oxidoreductase
Pyr_redox_3 PF13738 135 - 219 3.7e-10 Pyridine nucleotide-disulphide oxidoreductase
FMO-like PF00743 245 - 346 9.5e-08 Flavin-binding monooxygenase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 237, 902
AccB1I GGYRCC 3 cut(s) 38, 128, 767
AccBSI CCGCTC 1 cut(s) 65
AccI GTMKAC 2 cut(s) 138, 153
AccII CGCG 1 cut(s) 69
AciI CCGC 5 cut(s) 8, 19, 29, 48, 63
AcsI RAATTY 3 cut(s) 453, 486, 930
AcuI CTGAAG 2 cut(s) 966, 1110
AcyI GRCGYC 1 cut(s) 39
AfaI GTAC 5 cut(s) 209, 508, 735, 1005, 1112
AfiI CCNNNNNNNGG 2 cut(s) 25, 852
AflIII ACRYGT 1 cut(s) 666
AgsI TTSAA 5 cut(s) 644, 992, 1046, 1125, 1207
AjnI CCWGG 6 cut(s) 54, 117, 131, 457, 528, 652
AluBI AGCT 5 cut(s) 73, 552, 587, 995, 1193
AluI AGCT 5 cut(s) 73, 552, 587, 995, 1193
Alw21I GWGCWC 2 cut(s) 75, 554
Alw26I GTCTC 4 cut(s) 108, 305, 519, 698
AlwNI CAGNNNCTG 1 cut(s) 1088
Ama87I CYCGRG 2 cut(s) 199, 576
AoxI GGCC 3 cut(s) 52, 85, 797
ApeKI GCWGC 1 cut(s) 1064
ApoI RAATTY 3 cut(s) 453, 486, 930
ArsI GACNNNNNNTTYG 4 cut(s) 84, 116, 248, 280
AspLEI GCGC 1 cut(s) 41
AspS9I GGNCC 4 cut(s) 186, 193, 222, 797
AsuC2I CCSGG 2 cut(s) 254, 1157
AsuHPI GGTGA 4 cut(s) 43, 370, 392, 1043
AsuII TTCGAA 1 cut(s) 888
AvaI CYCGRG 2 cut(s) 199, 576
AvaII GGWCC 3 cut(s) 186, 193, 222
BaeGI GKGCMC 1 cut(s) 1141
BanI GGYRCC 3 cut(s) 38, 128, 767
BanII GRGCYC 3 cut(s) 75, 174, 554
BauI CACGAG 1 cut(s) 1194
BbsI GAAGAC 3 cut(s) 368, 808, 1206
Bbv12I GWGCWC 2 cut(s) 75, 554
BbvI GCAGC 1 cut(s) 1051
BccI CCATC 4 cut(s) 698, 719, 949, 952
BciT130I CCWGG 6 cut(s) 56, 119, 133, 459, 530, 654
BclI TGATCA 1 cut(s) 684
BcnI CCSGG 2 cut(s) 254, 1157
BcoDI GTCTC 4 cut(s) 108, 305, 519, 698
BfaI CTAG 3 cut(s) 80, 558, 618
BfmI CTRYAG 1 cut(s) 979
BfoI RGCGCY 1 cut(s) 42
BfuAI ACCTGC 2 cut(s) 237, 902
BglII AGATCT 1 cut(s) 620
BisI GCNGC 3 cut(s) 48, 63, 1065
BlsI GCNGC 3 cut(s) 49, 64, 1066
Bme1390I CCNGG 8 cut(s) 56, 119, 133, 254, 459, 530, 654, 1157
Bme18I GGWCC 3 cut(s) 186, 193, 222
BmeT110I CYCGRG 2 cut(s) 199, 576
BmgT120I GGNCC 4 cut(s) 186, 193, 222, 797
BmiI GGNNCC 7 cut(s) 40, 46, 130, 251, 769, 798, 834
BmrFI CCNGG 8 cut(s) 56, 119, 133, 254, 459, 530, 654, 1157
BmsI GCATC 3 cut(s) 394, 623, 639
BoxI GACNNNNGTC 1 cut(s) 191
BpiI GAAGAC 3 cut(s) 368, 808, 1206
BpmI CTGGAG 2 cut(s) 609, 1065
Bpu10I CCTNAGC 3 cut(s) 218, 276, 513
Bpu14I TTCGAA 1 cut(s) 888
BpuMI CCSGG 2 cut(s) 254, 1157
BsaHI GRCGYC 1 cut(s) 39
BsaI GGTCTC 2 cut(s) 108, 519
BsaJI CCNNGG 5 cut(s) 132, 147, 189, 828, 860
BsaXI ACNNNNNCTCC 4 cut(s) 105, 135, 308, 338
Bsc4I CCNNNNNNNGG 2 cut(s) 25, 852
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 211, 1061, 1082
Bse3DI GCAATG 2 cut(s) 444, 609
BseBI CCWGG 6 cut(s) 56, 119, 133, 459, 530, 654
BseDI CCNNGG 5 cut(s) 132, 147, 189, 828, 860
BseGI GGATG 3 cut(s) 787, 970, 1165
BseLI CCNNNNNNNGG 2 cut(s) 25, 852
BseMI GCAATG 2 cut(s) 444, 609
BseMII CTCAG 4 cut(s) 232, 426, 504, 1233
BseNI ACTGG 3 cut(s) 211, 1061, 1082
BseRI GAGGAG 2 cut(s) 126, 965
BseSI GKGCMC 1 cut(s) 1141
BseXI GCAGC 1 cut(s) 1051
Bsh1236I CGCG 1 cut(s) 69
BshFI GGCC 3 cut(s) 54, 87, 799
BshNI GGYRCC 3 cut(s) 38, 128, 767
BsiHKAI GWGCWC 2 cut(s) 75, 554
BsiHKCI CYCGRG 2 cut(s) 199, 576
BsiSI CCGG 5 cut(s) 42, 51, 76, 253, 1156
BsiWI CGTACG 1 cut(s) 506
BslFI GGGAC 2 cut(s) 269, 593
BslI CCNNNNNNNGG 2 cut(s) 25, 852
BsmAI GTCTC 4 cut(s) 108, 305, 519, 698
BsmBI CGTCTC 1 cut(s) 305
BsmFI GGGAC 2 cut(s) 269, 593
BsmI GAATGC 1 cut(s) 974
BsnI GGCC 3 cut(s) 54, 87, 799
Bso31I GGTCTC 2 cut(s) 108, 519
BsoBI CYCGRG 2 cut(s) 199, 576
Bsp119I TTCGAA 1 cut(s) 888
Bsp1286I GDGCHC 4 cut(s) 75, 174, 554, 1141
Bsp1407I TGTACA 1 cut(s) 733
Bsp143I GATC 3 cut(s) 33, 620, 684
Bsp19I CCATGG 1 cut(s) 860
Bsp68I TCGCGA 1 cut(s) 69
BspACI CCGC 5 cut(s) 8, 19, 29, 48, 63
BspANI GGCC 3 cut(s) 54, 87, 799
BspCNI CTCAG 4 cut(s) 231, 427, 505, 1232
BspFNI CGCG 1 cut(s) 69
BspHI TCATGA 1 cut(s) 1224
BspLI GGNNCC 7 cut(s) 40, 46, 130, 251, 769, 798, 834
BspMI ACCTGC 2 cut(s) 237, 902
BspT104I TTCGAA 1 cut(s) 888
BspT107I GGYRCC 3 cut(s) 38, 128, 767
BspTNI GGTCTC 2 cut(s) 108, 519
BsrBI CCGCTC 1 cut(s) 65
BsrDI GCAATG 2 cut(s) 444, 609
BsrFI RCCGGY 1 cut(s) 50
BsrGI TGTACA 1 cut(s) 733
BsrI ACTGG 3 cut(s) 211, 1061, 1082
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 5 cut(s) 132, 147, 189, 828, 860
BssMI GATC 3 cut(s) 33, 620, 684
BssNI GRCGYC 1 cut(s) 39
BssSI CACGAG 1 cut(s) 1194
BssT1I CCWWGG 3 cut(s) 147, 828, 860
Bst2BI CACGAG 1 cut(s) 1194
Bst2UI CCWGG 6 cut(s) 56, 119, 133, 459, 530, 654
Bst4CI ACNGT 4 cut(s) 190, 772, 791, 983
Bst6I CTCTTC 2 cut(s) 630, 942
BstACI GRCGYC 1 cut(s) 39
BstAUI TGTACA 1 cut(s) 733
BstBI TTCGAA 1 cut(s) 888
BstC8I GCNNGC 6 cut(s) 52, 67, 71, 1062, 1137, 1191
BstDEI CTNAG 6 cut(s) 218, 276, 366, 435, 513, 1219
BstDSI CCRYGG 2 cut(s) 189, 860
BstEII GGTNACC 1 cut(s) 855
BstF5I GGATG 3 cut(s) 787, 970, 1165
BstFNI CGCG 1 cut(s) 69
BstH2I RGCGCY 1 cut(s) 42
BstHHI GCGC 1 cut(s) 41
BstKTI GATC 3 cut(s) 36, 623, 687
BstMAI GTCTC 4 cut(s) 108, 305, 519, 698
BstMBI GATC 3 cut(s) 33, 620, 684
BstMWI GCNNNNNNNGC 2 cut(s) 47, 593
BstNI CCWGG 6 cut(s) 56, 119, 133, 459, 530, 654
BstNSI RCATGY 1 cut(s) 815
BstPAI GACNNNNGTC 1 cut(s) 191
BstPI GGTNACC 1 cut(s) 855
BstSCI CCNGG 8 cut(s) 54, 117, 131, 252, 457, 528, 652, 1155
BstSFI CTRYAG 1 cut(s) 979
BstSLI GKGCMC 1 cut(s) 1141
BstUI CGCG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 1051
BstV2I GAAGAC 3 cut(s) 368, 808, 1206
BstX2I RGATCY 1 cut(s) 620
BstXI CCANNNNNNTGG 1 cut(s) 125
BstYI RGATCY 1 cut(s) 620
BsuRI GGCC 3 cut(s) 54, 87, 799
BtgI CCRYGG 2 cut(s) 189, 860
BtsCI GGATG 3 cut(s) 787, 970, 1165
BtuMI TCGCGA 1 cut(s) 69
BveI ACCTGC 2 cut(s) 237, 902
Cac8I GCNNGC 6 cut(s) 52, 67, 71, 1062, 1137, 1191
CaiI CAGNNNCTG 1 cut(s) 1088
CciI TCATGA 1 cut(s) 1224
CfoI GCGC 1 cut(s) 41
Cfr10I RCCGGY 1 cut(s) 50
Cfr13I GGNCC 4 cut(s) 186, 193, 222, 797
CsiI ACCWGGT 2 cut(s) 117, 528
Csp6I GTAC 5 cut(s) 208, 507, 734, 1004, 1111
CspCI CAANNNNNGTGG 4 cut(s) 810, 845, 884, 919
CviAII CATG 6 cut(s) 244, 471, 812, 861, 1027, 1225
CviQI GTAC 5 cut(s) 208, 507, 734, 1004, 1111
DdeI CTNAG 6 cut(s) 218, 276, 366, 435, 513, 1219
DinI GGCGCC 1 cut(s) 40
DpnI GATC 3 cut(s) 35, 622, 686
DpnII GATC 3 cut(s) 33, 620, 684
Eam1104I CTCTTC 2 cut(s) 630, 942
EarI CTCTTC 2 cut(s) 630, 942
Ecl136II GAGCTC 2 cut(s) 73, 552
Eco130I CCWWGG 3 cut(s) 147, 828, 860
Eco24I GRGCYC 3 cut(s) 75, 174, 554
Eco31I GGTCTC 2 cut(s) 108, 519
Eco47I GGWCC 3 cut(s) 186, 193, 222
Eco53kI GAGCTC 2 cut(s) 73, 552
Eco57I CTGAAG 2 cut(s) 966, 1110
Eco88I CYCGRG 2 cut(s) 199, 576
Eco91I GGTNACC 1 cut(s) 855
EcoICRI GAGCTC 2 cut(s) 73, 552
EcoO65I GGTNACC 1 cut(s) 855
EcoRI GAATTC 1 cut(s) 930
EcoRII CCWGG 6 cut(s) 54, 117, 131, 457, 528, 652
EcoT14I CCWWGG 3 cut(s) 147, 828, 860
EcoT38I GRGCYC 3 cut(s) 75, 174, 554
EgeI GGCGCC 1 cut(s) 40
EheI GGCGCC 1 cut(s) 40
ErhI CCWWGG 3 cut(s) 147, 828, 860
Esp3I CGTCTC 1 cut(s) 305
FaeI CATG 6 cut(s) 247, 474, 815, 864, 1030, 1228
FalI AAGNNNNNCTT 2 cut(s) 800, 832
FaqI GGGAC 2 cut(s) 269, 593
FatI CATG 6 cut(s) 243, 470, 811, 860, 1026, 1224
FauI CCCGC 1 cut(s) 26
FbaI TGATCA 1 cut(s) 684
FblI GTMKAC 2 cut(s) 138, 153
Fnu4HI GCNGC 3 cut(s) 48, 63, 1065
FokI GGATG 3 cut(s) 794, 977, 1172
FriOI GRGCYC 3 cut(s) 75, 174, 554
Fsp4HI GCNGC 3 cut(s) 48, 63, 1065
FspBI CTAG 3 cut(s) 80, 558, 618
GlaI GCGC 1 cut(s) 40
GluI GCNGC 3 cut(s) 48, 63, 1065
GsuI CTGGAG 2 cut(s) 609, 1065
HaeII RGCGCY 1 cut(s) 42
HaeIII GGCC 3 cut(s) 54, 87, 799
HapII CCGG 5 cut(s) 42, 51, 76, 253, 1156
HhaI GCGC 1 cut(s) 41
Hin1I GRCGYC 1 cut(s) 39
Hin1II CATG 6 cut(s) 247, 474, 815, 864, 1030, 1228
Hin6I GCGC 1 cut(s) 39
HinP1I GCGC 1 cut(s) 39
HincII GTYRAC 1 cut(s) 154
HindII GTYRAC 1 cut(s) 154
HindIII AAGCTT 1 cut(s) 993
HinfI GANTC 1 cut(s) 155
HpaII CCGG 5 cut(s) 42, 51, 76, 253, 1156
HphI GGTGA 4 cut(s) 43, 370, 392, 1043
Hpy166II GTNNAC 6 cut(s) 139, 154, 196, 607, 734, 986
Hpy188I TCNGA 4 cut(s) 160, 946, 971, 1090
Hpy188III TCNNGA 9 cut(s) 68, 220, 524, 578, 618, 629, 1196, 1207, 1225
Hpy8I GTNNAC 6 cut(s) 139, 154, 196, 607, 734, 986
HpyAV CCTTC 3 cut(s) 77, 349, 859
HpyCH4III ACNGT 4 cut(s) 190, 772, 791, 983
HpyCH4IV ACGT 2 cut(s) 24, 666
HpyCH4V TGCA 3 cut(s) 4, 614, 1189
HpyF10VI GCNNNNNNNGC 2 cut(s) 47, 593
HpyF3I CTNAG 6 cut(s) 218, 276, 366, 435, 513, 1219
HpySE526I ACGT 2 cut(s) 24, 666
Hsp92I GRCGYC 1 cut(s) 39
Hsp92II CATG 6 cut(s) 247, 474, 815, 864, 1030, 1228
HspAI GCGC 1 cut(s) 39
KasI GGCGCC 1 cut(s) 38
KroI GCCGGC 1 cut(s) 50
KroNI GCCGGC 1 cut(s) 52
Ksp22I TGATCA 1 cut(s) 684
Kzo9I GATC 3 cut(s) 33, 620, 684
LmnI GCTCC 4 cut(s) 44, 78, 549, 838
Lsp1109I GCAGC 1 cut(s) 1051
LweI GCATC 3 cut(s) 394, 623, 639
MabI ACCWGGT 2 cut(s) 117, 528
MaeI CTAG 3 cut(s) 80, 558, 618
MaeII ACGT 2 cut(s) 24, 666
MaeIII GTNAC 3 cut(s) 772, 837, 855
MalI GATC 3 cut(s) 35, 622, 686
MbiI CCGCTC 1 cut(s) 65
MboI GATC 3 cut(s) 33, 620, 684
MboII GAAGA 8 cut(s) 373, 617, 713, 808, 959, 1103, 1181, 1211
MfeI CAATTG 1 cut(s) 165
MflI RGATCY 1 cut(s) 620
MhlI GDGCHC 4 cut(s) 75, 174, 554, 1141
MluCI AATT 6 cut(s) 165, 453, 486, 499, 890, 930
Mly113I GGCGCC 1 cut(s) 39
MlyI GAGTC 1 cut(s) 149
MmeI TCCRAC 1 cut(s) 183
MroNI GCCGGC 1 cut(s) 50
MseI TTAA 1 cut(s) 542
MspI CCGG 5 cut(s) 42, 51, 76, 253, 1156
MspR9I CCNGG 8 cut(s) 56, 119, 133, 254, 459, 530, 654, 1157
MunI CAATTG 1 cut(s) 165
Mva1269I GAATGC 1 cut(s) 974
MvaI CCWGG 6 cut(s) 56, 119, 133, 459, 530, 654
MvnI CGCG 1 cut(s) 69
MwoI GCNNNNNNNGC 2 cut(s) 47, 593
NaeI GCCGGC 1 cut(s) 52
NarI GGCGCC 1 cut(s) 39
NciI CCSGG 2 cut(s) 254, 1157
NcoI CCATGG 1 cut(s) 860
NdeII GATC 3 cut(s) 33, 620, 684
NgoMIV GCCGGC 1 cut(s) 50
NlaIII CATG 6 cut(s) 247, 474, 815, 864, 1030, 1228
NlaIV GGNNCC 7 cut(s) 40, 46, 130, 251, 769, 798, 834
NmeAIII GCCGAG 1 cut(s) 258
NmuCI GTSAC 2 cut(s) 772, 837
NruI TCGCGA 1 cut(s) 69
NspI RCATGY 1 cut(s) 815
NspV TTCGAA 1 cut(s) 888
PaeR7I CTCGAG 1 cut(s) 199
PagI TCATGA 1 cut(s) 1224
PcsI WCGNNNNNNNCGW 1 cut(s) 66
PctI GAATGC 1 cut(s) 974
PdiI GCCGGC 1 cut(s) 52
Pfl23II CGTACG 1 cut(s) 506
PfoI TCCNGGA 1 cut(s) 252
PkrI GCNGC 3 cut(s) 49, 64, 1066
PleI GAGTC 1 cut(s) 149
PluTI GGCGCC 1 cut(s) 42
PpsI GAGTC 1 cut(s) 149
PshAI GACNNNNGTC 1 cut(s) 191
Psp124BI GAGCTC 2 cut(s) 75, 554
Psp6I CCWGG 6 cut(s) 54, 117, 131, 457, 528, 652
PspEI GGTNACC 1 cut(s) 855
PspGI CCWGG 6 cut(s) 54, 117, 131, 457, 528, 652
PspLI CGTACG 1 cut(s) 506
PspN4I GGNNCC 7 cut(s) 40, 46, 130, 251, 769, 798, 834
PspPI GGNCC 4 cut(s) 186, 193, 222, 797
PspXI VCTCGAGB 1 cut(s) 199
PstNI CAGNNNCTG 1 cut(s) 1088
PsuI RGATCY 1 cut(s) 620
RruI TCGCGA 1 cut(s) 69
RsaI GTAC 5 cut(s) 209, 508, 735, 1005, 1112
RsaNI GTAC 5 cut(s) 208, 507, 734, 1004, 1111
SacI GAGCTC 2 cut(s) 75, 554
SalI GTCGAC 1 cut(s) 152
SaqAI TTAA 1 cut(s) 542
SatI GCNGC 3 cut(s) 48, 63, 1065
Sau3AI GATC 3 cut(s) 33, 620, 684
Sau96I GGNCC 4 cut(s) 186, 193, 222, 797
SchI GAGTC 1 cut(s) 149
ScrFI CCNGG 8 cut(s) 56, 119, 133, 254, 459, 530, 654, 1157
SduI GDGCHC 4 cut(s) 75, 174, 554, 1141
SexAI ACCWGGT 2 cut(s) 117, 528
SfaNI GCATC 3 cut(s) 394, 623, 639
SfcI CTRYAG 1 cut(s) 979
SfoI GGCGCC 1 cut(s) 40
Sfr274I CTCGAG 1 cut(s) 199
SfuI TTCGAA 1 cut(s) 888
SinI GGWCC 3 cut(s) 186, 193, 222
SlaI CTCGAG 1 cut(s) 199
SmlI CTYRAG 1 cut(s) 199
SmoI CTYRAG 1 cut(s) 199
Sse9I AATT 6 cut(s) 165, 453, 486, 499, 890, 930
SsiI CCGC 5 cut(s) 8, 19, 29, 48, 63
SspDI GGCGCC 1 cut(s) 38
SspMI CTAG 3 cut(s) 80, 558, 618
SstI GAGCTC 2 cut(s) 75, 554
StyD4I CCNGG 8 cut(s) 54, 117, 131, 252, 457, 528, 652, 1155
StyI CCWWGG 3 cut(s) 147, 828, 860
TaaI ACNGT 4 cut(s) 190, 772, 791, 983
TaiI ACGT 2 cut(s) 27, 669
TaqI TCGA 6 cut(s) 153, 174, 200, 523, 888, 928
TasI AATT 6 cut(s) 165, 453, 486, 499, 890, 930
TatI WGTACW 2 cut(s) 733, 1110
TauI GCSGC 2 cut(s) 50, 65
Tru1I TTAA 1 cut(s) 542
Tru9I TTAA 1 cut(s) 542
TseFI GTSAC 2 cut(s) 772, 837
TseI GCWGC 1 cut(s) 1064
Tsp45I GTSAC 2 cut(s) 772, 837
TspDTI ATGAA 3 cut(s) 648, 665, 714
TspGWI ACGGA 2 cut(s) 329, 825
VpaK11BI GGWCC 3 cut(s) 186, 193, 222
XapI RAATTY 3 cut(s) 453, 486, 930
XbaI TCTAGA 1 cut(s) 617
XceI RCATGY 1 cut(s) 815
XcmI CCANNNNNNNNNTGG 1 cut(s) 22
XhoI CTCGAG 1 cut(s) 199
XmiI GTMKAC 2 cut(s) 138, 153
XspI CTAG 3 cut(s) 80, 558, 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.