flavin-containing monooxygenase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 1095 |
| Acc36I | ACCTGC | 1 cut(s) | 1028 |
| AccB1I | GGYRCC | 1 cut(s) | 50 |
| AccI | GTMKAC | 1 cut(s) | 150 |
| AccII | CGCG | 1 cut(s) | 1072 |
| AccIII | TCCGGA | 1 cut(s) | 87 |
| AciI | CCGC | 5 cut(s) | 63, 75, 138, 833, 1388 |
| AcoI | YGGCCR | 1 cut(s) | 282 |
| AcsI | RAATTY | 3 cut(s) | 543, 863, 1016 |
| AcuI | CTGAAG | 1 cut(s) | 1315 |
| AcvI | CACGTG | 2 cut(s) | 37, 80 |
| AcyI | GRCGYC | 2 cut(s) | 51, 1092 |
| AfaI | GTAC | 5 cut(s) | 221, 598, 860, 932, 1238 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 22, 94, 250, 280, 978, 1398 |
| AflIII | ACRYGT | 1 cut(s) | 756 |
| AgsI | TTSAA | 7 cut(s) | 352, 734, 1016, 1022, 1217, 1358, 1398 |
| AhlI | ACTAGT | 1 cut(s) | 647 |
| AjnI | CCWGG | 5 cut(s) | 66, 200, 452, 547, 786 |
| AluBI | AGCT | 7 cut(s) | 59, 85, 1100, 1121, 1193, 1247, 1319 |
| AluI | AGCT | 7 cut(s) | 59, 85, 1100, 1121, 1193, 1247, 1319 |
| Alw21I | GWGCWC | 2 cut(s) | 87, 655 |
| Alw26I | GTCTC | 7 cut(s) | 120, 300, 382, 392, 663, 878, 1268 |
| Ama87I | CYCGRG | 1 cut(s) | 211 |
| Aor13HI | TCCGGA | 1 cut(s) | 87 |
| AoxI | GGCC | 5 cut(s) | 24, 64, 252, 282, 923 |
| ApeKI | GCWGC | 3 cut(s) | 739, 1190, 1203 |
| ApoI | RAATTY | 3 cut(s) | 543, 863, 1016 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 96, 128, 152, 184, 260, 292 |
| AspLEI | GCGC | 2 cut(s) | 53, 644 |
| AspS9I | GGNCC | 4 cut(s) | 198, 205, 234, 923 |
| AsuC2I | CCSGG | 3 cut(s) | 266, 324, 744 |
| AsuHPI | GGTGA | 3 cut(s) | 457, 479, 1292 |
| AvaI | CYCGRG | 1 cut(s) | 211 |
| AvaII | GGWCC | 3 cut(s) | 198, 205, 234 |
| BalI | TGGCCA | 1 cut(s) | 284 |
| BanI | GGYRCC | 1 cut(s) | 50 |
| BanII | GRGCYC | 3 cut(s) | 87, 186, 531 |
| BauI | CACGAG | 1 cut(s) | 666 |
| BbrPI | CACGTG | 2 cut(s) | 37, 80 |
| BbsI | GAAGAC | 2 cut(s) | 106, 934 |
| Bbv12I | GWGCWC | 2 cut(s) | 87, 655 |
| BbvI | GCAGC | 3 cut(s) | 751, 1190, 1202 |
| BccI | CCATC | 3 cut(s) | 788, 1075, 1078 |
| BceAI | ACGGC | 1 cut(s) | 39 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1050, 1084, 1169, 1203 |
| BciT130I | CCWGG | 5 cut(s) | 68, 202, 454, 549, 788 |
| BciVI | GTATCC | 3 cut(s) | 330, 1166, 1358 |
| BclI | TGATCA | 1 cut(s) | 774 |
| BcnI | CCSGG | 3 cut(s) | 266, 324, 744 |
| BcoDI | GTCTC | 7 cut(s) | 120, 300, 382, 392, 663, 878, 1268 |
| BcuI | ACTAGT | 1 cut(s) | 647 |
| BfaI | CTAG | 2 cut(s) | 648, 708 |
| BfmI | CTRYAG | 1 cut(s) | 1248 |
| BfoI | RGCGCY | 2 cut(s) | 54, 645 |
| BfuAI | ACCTGC | 1 cut(s) | 1028 |
| BfuI | GTATCC | 3 cut(s) | 330, 1166, 1358 |
| BglII | AGATCT | 1 cut(s) | 710 |
| BisI | GCNGC | 6 cut(s) | 64, 75, 139, 740, 1191, 1204 |
| BlsI | GCNGC | 6 cut(s) | 65, 76, 140, 741, 1192, 1205 |
| Bme1390I | CCNGG | 8 cut(s) | 68, 202, 266, 324, 454, 549, 744, 788 |
| Bme18I | GGWCC | 3 cut(s) | 198, 205, 234 |
| BmeT110I | CYCGRG | 1 cut(s) | 211 |
| BmgT120I | GGNCC | 4 cut(s) | 198, 205, 234, 923 |
| BmiI | GGNNCC | 4 cut(s) | 52, 206, 263, 960 |
| BmrFI | CCNGG | 8 cut(s) | 68, 202, 266, 324, 454, 549, 744, 788 |
| BmrI | ACTGGG | 1 cut(s) | 1386 |
| BmsI | GCATC | 6 cut(s) | 484, 526, 561, 713, 903, 1137 |
| BmuI | ACTGGG | 1 cut(s) | 1386 |
| BoxI | GACNNNNGTC | 1 cut(s) | 203 |
| BpiI | GAAGAC | 2 cut(s) | 106, 934 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1129, 1161 |
| Bpu10I | CCTNAGC | 2 cut(s) | 230, 603 |
| BpuEI | CTTGAG | 1 cut(s) | 902 |
| BpuMI | CCSGG | 3 cut(s) | 266, 324, 744 |
| BsaAI | YACGTR | 3 cut(s) | 37, 80, 1369 |
| BsaHI | GRCGYC | 2 cut(s) | 51, 1092 |
| BsaI | GGTCTC | 4 cut(s) | 120, 300, 382, 878 |
| BsaJI | CCNNGG | 3 cut(s) | 201, 255, 986 |
| BsaWI | WCCGGW | 2 cut(s) | 87, 1270 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 69, 82, 99, 112, 117, 147 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 22, 94, 250, 280, 978, 1398 |
| Bse1I | ACTGG | 2 cut(s) | 223, 1392 |
| Bse3DI | GCAATG | 2 cut(s) | 699, 1152 |
| BseAI | TCCGGA | 1 cut(s) | 87 |
| BseBI | CCWGG | 5 cut(s) | 68, 202, 454, 549, 788 |
| BseDI | CCNNGG | 3 cut(s) | 201, 255, 986 |
| BseGI | GGATG | 4 cut(s) | 487, 841, 913, 1128 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 22, 94, 250, 280, 978, 1398 |
| BseMI | GCAATG | 2 cut(s) | 699, 1152 |
| BseMII | CTCAG | 6 cut(s) | 244, 372, 393, 516, 594, 1185 |
| BseNI | ACTGG | 2 cut(s) | 223, 1392 |
| BseRI | GAGGAG | 2 cut(s) | 138, 1091 |
| BseXI | GCAGC | 3 cut(s) | 751, 1190, 1202 |
| BseYI | CCCAGC | 1 cut(s) | 1207 |
| BsgI | GTGCAG | 1 cut(s) | 835 |
| Bsh1236I | CGCG | 1 cut(s) | 1072 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1271 |
| BshFI | GGCC | 5 cut(s) | 26, 66, 254, 284, 925 |
| BshNI | GGYRCC | 1 cut(s) | 50 |
| BsiEI | CGRYCG | 1 cut(s) | 1271 |
| BsiHKAI | GWGCWC | 2 cut(s) | 87, 655 |
| BsiHKCI | CYCGRG | 1 cut(s) | 211 |
| BsiSI | CCGG | 6 cut(s) | 54, 88, 265, 323, 743, 1271 |
| BslFI | GGGAC | 2 cut(s) | 281, 1370 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 22, 94, 250, 280, 978, 1398 |
| BsmAI | GTCTC | 7 cut(s) | 120, 300, 382, 392, 663, 878, 1268 |
| BsmFI | GGGAC | 2 cut(s) | 281, 1370 |
| BsnI | GGCC | 5 cut(s) | 26, 66, 254, 284, 925 |
| Bso31I | GGTCTC | 4 cut(s) | 120, 300, 382, 878 |
| BsoBI | CYCGRG | 1 cut(s) | 211 |
| Bsp1286I | GDGCHC | 4 cut(s) | 87, 186, 531, 655 |
| Bsp13I | TCCGGA | 1 cut(s) | 87 |
| Bsp1407I | TGTACA | 1 cut(s) | 930 |
| Bsp143I | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| Bsp19I | CCATGG | 2 cut(s) | 255, 986 |
| Bsp68I | TCGCGA | 1 cut(s) | 1072 |
| BspACI | CCGC | 5 cut(s) | 63, 75, 138, 833, 1388 |
| BspANI | GGCC | 5 cut(s) | 26, 66, 254, 284, 925 |
| BspCNI | CTCAG | 6 cut(s) | 243, 373, 394, 517, 595, 1186 |
| BspEI | TCCGGA | 1 cut(s) | 87 |
| BspFNI | CGCG | 1 cut(s) | 1072 |
| BspHI | TCATGA | 1 cut(s) | 1321 |
| BspLI | GGNNCC | 4 cut(s) | 52, 206, 263, 960 |
| BspMI | ACCTGC | 1 cut(s) | 1028 |
| BspT107I | GGYRCC | 1 cut(s) | 50 |
| BspTNI | GGTCTC | 4 cut(s) | 120, 300, 382, 878 |
| BsrDI | GCAATG | 2 cut(s) | 699, 1152 |
| BsrGI | TGTACA | 1 cut(s) | 930 |
| BsrI | ACTGG | 2 cut(s) | 223, 1392 |
| BssECI | CCNNGG | 3 cut(s) | 201, 255, 986 |
| BssMI | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| BssNI | GRCGYC | 2 cut(s) | 51, 1092 |
| BssSI | CACGAG | 1 cut(s) | 666 |
| BssT1I | CCWWGG | 2 cut(s) | 255, 986 |
| Bst2BI | CACGAG | 1 cut(s) | 666 |
| Bst2UI | CCWGG | 5 cut(s) | 68, 202, 454, 549, 788 |
| Bst4CI | ACNGT | 2 cut(s) | 904, 917 |
| Bst6I | CTCTTC | 1 cut(s) | 294 |
| BstACI | GRCGYC | 2 cut(s) | 51, 1092 |
| BstAUI | TGTACA | 1 cut(s) | 930 |
| BstBAI | YACGTR | 3 cut(s) | 37, 80, 1369 |
| BstC8I | GCNNGC | 3 cut(s) | 61, 1188, 1317 |
| BstDEI | CTNAG | 6 cut(s) | 230, 381, 402, 525, 603, 1194 |
| BstDSI | CCRYGG | 2 cut(s) | 255, 986 |
| BstEII | GGTNACC | 1 cut(s) | 981 |
| BstF5I | GGATG | 4 cut(s) | 487, 841, 913, 1128 |
| BstFNI | CGCG | 1 cut(s) | 1072 |
| BstH2I | RGCGCY | 2 cut(s) | 54, 645 |
| BstHHI | GCGC | 2 cut(s) | 53, 644 |
| BstKTI | GATC | 5 cut(s) | 48, 619, 713, 777, 1300 |
| BstMAI | GTCTC | 7 cut(s) | 120, 300, 382, 392, 663, 878, 1268 |
| BstMBI | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| BstMCI | CGRYCG | 1 cut(s) | 1271 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 650 |
| BstNI | CCWGG | 5 cut(s) | 68, 202, 454, 549, 788 |
| BstNSI | RCATGY | 3 cut(s) | 220, 760, 941 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 203 |
| BstPI | GGTNACC | 1 cut(s) | 981 |
| BstSCI | CCNGG | 8 cut(s) | 66, 200, 264, 322, 452, 547, 742, 786 |
| BstSFI | CTRYAG | 1 cut(s) | 1248 |
| BstUI | CGCG | 1 cut(s) | 1072 |
| BstV1I | GCAGC | 3 cut(s) | 751, 1190, 1202 |
| BstV2I | GAAGAC | 2 cut(s) | 106, 934 |
| BstX2I | RGATCY | 1 cut(s) | 710 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 794 |
| BstYI | RGATCY | 1 cut(s) | 710 |
| BsuI | GTATCC | 3 cut(s) | 330, 1166, 1358 |
| BsuRI | GGCC | 5 cut(s) | 26, 66, 254, 284, 925 |
| BtgI | CCRYGG | 2 cut(s) | 255, 986 |
| BtgZI | GCGATG | 1 cut(s) | 1053 |
| BtsCI | GGATG | 4 cut(s) | 487, 841, 913, 1128 |
| BtsI | GCAGTG | 2 cut(s) | 48, 847 |
| BtsIMutI | CAGTG | 2 cut(s) | 48, 847 |
| BtuMI | TCGCGA | 1 cut(s) | 1072 |
| BveI | ACCTGC | 1 cut(s) | 1028 |
| Cac8I | GCNNGC | 3 cut(s) | 61, 1188, 1317 |
| CciI | TCATGA | 1 cut(s) | 1321 |
| CfoI | GCGC | 2 cut(s) | 53, 644 |
| Cfr13I | GGNCC | 4 cut(s) | 198, 205, 234, 923 |
| Csp6I | GTAC | 5 cut(s) | 220, 597, 859, 931, 1237 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 936, 971, 1010, 1045 |
| CviAII | CATG | 8 cut(s) | 217, 256, 561, 757, 938, 987, 1009, 1322 |
| CviQI | GTAC | 5 cut(s) | 220, 597, 859, 931, 1237 |
| DdeI | CTNAG | 6 cut(s) | 230, 381, 402, 525, 603, 1194 |
| DinI | GGCGCC | 1 cut(s) | 52 |
| DpnI | GATC | 5 cut(s) | 47, 618, 712, 776, 1299 |
| DpnII | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| EaeI | YGGCCR | 1 cut(s) | 282 |
| Eam1104I | CTCTTC | 1 cut(s) | 294 |
| EarI | CTCTTC | 1 cut(s) | 294 |
| Ecl136II | GAGCTC | 1 cut(s) | 85 |
| Eco130I | CCWWGG | 2 cut(s) | 255, 986 |
| Eco24I | GRGCYC | 3 cut(s) | 87, 186, 531 |
| Eco31I | GGTCTC | 4 cut(s) | 120, 300, 382, 878 |
| Eco47I | GGWCC | 3 cut(s) | 198, 205, 234 |
| Eco53kI | GAGCTC | 1 cut(s) | 85 |
| Eco57I | CTGAAG | 1 cut(s) | 1315 |
| Eco72I | CACGTG | 2 cut(s) | 37, 80 |
| Eco88I | CYCGRG | 1 cut(s) | 211 |
| Eco91I | GGTNACC | 1 cut(s) | 981 |
| EcoICRI | GAGCTC | 1 cut(s) | 85 |
| EcoO65I | GGTNACC | 1 cut(s) | 981 |
| EcoRII | CCWGG | 5 cut(s) | 66, 200, 452, 547, 786 |
| EcoT14I | CCWWGG | 2 cut(s) | 255, 986 |
| EcoT38I | GRGCYC | 3 cut(s) | 87, 186, 531 |
| EgeI | GGCGCC | 1 cut(s) | 52 |
| EheI | GGCGCC | 1 cut(s) | 52 |
| ErhI | CCWWGG | 2 cut(s) | 255, 986 |
| FaeI | CATG | 8 cut(s) | 220, 259, 564, 760, 941, 990, 1012, 1325 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 926, 958 |
| FaqI | GGGAC | 2 cut(s) | 281, 1370 |
| FatI | CATG | 8 cut(s) | 216, 255, 560, 756, 937, 986, 1008, 1321 |
| FauI | CCCGC | 1 cut(s) | 1395 |
| FbaI | TGATCA | 1 cut(s) | 774 |
| FblI | GTMKAC | 1 cut(s) | 150 |
| Fnu4HI | GCNGC | 6 cut(s) | 64, 75, 139, 740, 1191, 1204 |
| FokI | GGATG | 4 cut(s) | 494, 848, 920, 1115 |
| FriOI | GRGCYC | 3 cut(s) | 87, 186, 531 |
| Fsp4HI | GCNGC | 6 cut(s) | 64, 75, 139, 740, 1191, 1204 |
| FspBI | CTAG | 2 cut(s) | 648, 708 |
| GlaI | GCGC | 2 cut(s) | 52, 643 |
| GluI | GCNGC | 6 cut(s) | 64, 75, 139, 740, 1191, 1204 |
| GsaI | CCCAGC | 1 cut(s) | 1211 |
| HaeII | RGCGCY | 2 cut(s) | 54, 645 |
| HaeIII | GGCC | 5 cut(s) | 26, 66, 254, 284, 925 |
| HapII | CCGG | 6 cut(s) | 54, 88, 265, 323, 743, 1271 |
| HhaI | GCGC | 2 cut(s) | 53, 644 |
| Hin1I | GRCGYC | 2 cut(s) | 51, 1092 |
| Hin1II | CATG | 8 cut(s) | 220, 259, 564, 760, 941, 990, 1012, 1325 |
| Hin6I | GCGC | 2 cut(s) | 51, 642 |
| HinP1I | GCGC | 2 cut(s) | 51, 642 |
| HindIII | AAGCTT | 2 cut(s) | 1098, 1119 |
| HinfI | GANTC | 3 cut(s) | 167, 193, 1056 |
| HpaII | CCGG | 6 cut(s) | 54, 88, 265, 323, 743, 1271 |
| HphI | GGTGA | 3 cut(s) | 457, 479, 1292 |
| Hpy166II | GTNNAC | 3 cut(s) | 151, 208, 697 |
| Hpy188I | TCNGA | 6 cut(s) | 159, 172, 198, 382, 812, 1334 |
| Hpy8I | GTNNAC | 3 cut(s) | 151, 208, 697 |
| Hpy99I | CGWCG | 1 cut(s) | 1181 |
| HpyAV | CCTTC | 4 cut(s) | 309, 346, 436, 985 |
| HpyCH4III | ACNGT | 2 cut(s) | 904, 917 |
| HpyCH4IV | ACGT | 4 cut(s) | 36, 79, 1092, 1368 |
| HpyCH4V | TGCA | 7 cut(s) | 4, 686, 704, 852, 1190, 1265, 1315 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 650 |
| HpyF3I | CTNAG | 6 cut(s) | 230, 381, 402, 525, 603, 1194 |
| HpySE526I | ACGT | 4 cut(s) | 36, 79, 1092, 1368 |
| Hsp92I | GRCGYC | 2 cut(s) | 51, 1092 |
| Hsp92II | CATG | 8 cut(s) | 220, 259, 564, 760, 941, 990, 1012, 1325 |
| HspAI | GCGC | 2 cut(s) | 51, 642 |
| KasI | GGCGCC | 1 cut(s) | 50 |
| Kpn2I | TCCGGA | 1 cut(s) | 87 |
| Ksp22I | TGATCA | 1 cut(s) | 774 |
| Kzo9I | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| LmnI | GCTCC | 5 cut(s) | 56, 90, 639, 964, 1003 |
| Lsp1109I | GCAGC | 3 cut(s) | 751, 1190, 1202 |
| LweI | GCATC | 6 cut(s) | 484, 526, 561, 713, 903, 1137 |
| MaeI | CTAG | 2 cut(s) | 648, 708 |
| MaeII | ACGT | 4 cut(s) | 36, 79, 1092, 1368 |
| MaeIII | GTNAC | 7 cut(s) | 32, 98, 326, 898, 963, 981, 1369 |
| MalI | GATC | 5 cut(s) | 47, 618, 712, 776, 1299 |
| MboI | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| MboII | GAAGA | 9 cut(s) | 106, 302, 305, 311, 803, 836, 934, 1229, 1307 |
| MfeI | CAATTG | 1 cut(s) | 177 |
| MflI | RGATCY | 1 cut(s) | 710 |
| MhlI | GDGCHC | 4 cut(s) | 87, 186, 531, 655 |
| MlsI | TGGCCA | 1 cut(s) | 284 |
| MluCI | AATT | 6 cut(s) | 177, 543, 589, 627, 863, 1016 |
| MluNI | TGGCCA | 1 cut(s) | 284 |
| Mly113I | GGCGCC | 1 cut(s) | 51 |
| MlyI | GAGTC | 1 cut(s) | 176 |
| MmeI | TCCRAC | 2 cut(s) | 195, 658 |
| Mox20I | TGGCCA | 1 cut(s) | 284 |
| MroI | TCCGGA | 1 cut(s) | 87 |
| MscI | TGGCCA | 1 cut(s) | 284 |
| MseI | TTAA | 1 cut(s) | 1346 |
| Msp20I | TGGCCA | 1 cut(s) | 284 |
| MspA1I | CMGCKG | 1 cut(s) | 1193 |
| MspI | CCGG | 6 cut(s) | 54, 88, 265, 323, 743, 1271 |
| MspR9I | CCNGG | 8 cut(s) | 68, 202, 266, 324, 454, 549, 744, 788 |
| MunI | CAATTG | 1 cut(s) | 177 |
| MvaI | CCWGG | 5 cut(s) | 68, 202, 454, 549, 788 |
| MvnI | CGCG | 1 cut(s) | 1072 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 650 |
| NarI | GGCGCC | 1 cut(s) | 51 |
| NciI | CCSGG | 3 cut(s) | 266, 324, 744 |
| NcoI | CCATGG | 2 cut(s) | 255, 986 |
| NdeII | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| NlaIII | CATG | 8 cut(s) | 220, 259, 564, 760, 941, 990, 1012, 1325 |
| NlaIV | GGNNCC | 4 cut(s) | 52, 206, 263, 960 |
| NmuCI | GTSAC | 6 cut(s) | 32, 98, 326, 898, 963, 1369 |
| NruI | TCGCGA | 1 cut(s) | 1072 |
| NspI | RCATGY | 3 cut(s) | 220, 760, 941 |
| PaeR7I | CTCGAG | 1 cut(s) | 211 |
| PagI | TCATGA | 1 cut(s) | 1321 |
| PciI | ACATGT | 1 cut(s) | 756 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 114 |
| PfeI | GAWTC | 2 cut(s) | 193, 1056 |
| PfoI | TCCNGGA | 3 cut(s) | 264, 452, 786 |
| PkrI | GCNGC | 6 cut(s) | 65, 76, 140, 741, 1192, 1205 |
| PleI | GAGTC | 1 cut(s) | 175 |
| PluTI | GGCGCC | 1 cut(s) | 54 |
| PmaCI | CACGTG | 2 cut(s) | 37, 80 |
| PmlI | CACGTG | 2 cut(s) | 37, 80 |
| PpsI | GAGTC | 1 cut(s) | 175 |
| Ppu21I | YACGTR | 3 cut(s) | 37, 80, 1369 |
| PscI | ACATGT | 1 cut(s) | 756 |
| PshAI | GACNNNNGTC | 1 cut(s) | 203 |
| Psp124BI | GAGCTC | 1 cut(s) | 87 |
| Psp6I | CCWGG | 5 cut(s) | 66, 200, 452, 547, 786 |
| PspCI | CACGTG | 2 cut(s) | 37, 80 |
| PspEI | GGTNACC | 1 cut(s) | 981 |
| PspFI | CCCAGC | 1 cut(s) | 1207 |
| PspGI | CCWGG | 5 cut(s) | 66, 200, 452, 547, 786 |
| PspN4I | GGNNCC | 4 cut(s) | 52, 206, 263, 960 |
| PspPI | GGNCC | 4 cut(s) | 198, 205, 234, 923 |
| PspXI | VCTCGAGB | 1 cut(s) | 211 |
| PsuI | RGATCY | 1 cut(s) | 710 |
| PvuII | CAGCTG | 1 cut(s) | 1193 |
| RruI | TCGCGA | 1 cut(s) | 1072 |
| RsaI | GTAC | 5 cut(s) | 221, 598, 860, 932, 1238 |
| RsaNI | GTAC | 5 cut(s) | 220, 597, 859, 931, 1237 |
| SacI | GAGCTC | 1 cut(s) | 87 |
| SaqAI | TTAA | 1 cut(s) | 1346 |
| SatI | GCNGC | 6 cut(s) | 64, 75, 139, 740, 1191, 1204 |
| Sau3AI | GATC | 5 cut(s) | 45, 616, 710, 774, 1297 |
| Sau96I | GGNCC | 4 cut(s) | 198, 205, 234, 923 |
| SchI | GAGTC | 1 cut(s) | 176 |
| ScrFI | CCNGG | 8 cut(s) | 68, 202, 266, 324, 454, 549, 744, 788 |
| SduI | GDGCHC | 4 cut(s) | 87, 186, 531, 655 |
| SfaNI | GCATC | 6 cut(s) | 484, 526, 561, 713, 903, 1137 |
| SfcI | CTRYAG | 1 cut(s) | 1248 |
| SfoI | GGCGCC | 1 cut(s) | 52 |
| Sfr274I | CTCGAG | 1 cut(s) | 211 |
| SinI | GGWCC | 3 cut(s) | 198, 205, 234 |
| SlaI | CTCGAG | 1 cut(s) | 211 |
| SmlI | CTYRAG | 2 cut(s) | 211, 881 |
| SmoI | CTYRAG | 2 cut(s) | 211, 881 |
| SpeI | ACTAGT | 1 cut(s) | 647 |
| Sse9I | AATT | 6 cut(s) | 177, 543, 589, 627, 863, 1016 |
| SsiI | CCGC | 5 cut(s) | 63, 75, 138, 833, 1388 |
| SspDI | GGCGCC | 1 cut(s) | 50 |
| SspMI | CTAG | 2 cut(s) | 648, 708 |
| SstI | GAGCTC | 1 cut(s) | 87 |
| StyD4I | CCNGG | 8 cut(s) | 66, 200, 264, 322, 452, 547, 742, 786 |
| StyI | CCWWGG | 2 cut(s) | 255, 986 |
| TaaI | ACNGT | 2 cut(s) | 904, 917 |
| TaiI | ACGT | 4 cut(s) | 39, 82, 1095, 1371 |
| TaqI | TCGA | 6 cut(s) | 117, 186, 212, 396, 613, 1116 |
| TasI | AATT | 6 cut(s) | 177, 543, 589, 627, 863, 1016 |
| TatI | WGTACW | 2 cut(s) | 930, 1236 |
| TauI | GCSGC | 3 cut(s) | 66, 77, 141 |
| TfiI | GAWTC | 2 cut(s) | 193, 1056 |
| Tru1I | TTAA | 1 cut(s) | 1346 |
| Tru9I | TTAA | 1 cut(s) | 1346 |
| TscAI | CASTG | 2 cut(s) | 48, 854 |
| TseFI | GTSAC | 6 cut(s) | 32, 98, 326, 898, 963, 1369 |
| TseI | GCWGC | 3 cut(s) | 739, 1190, 1203 |
| Tsp45I | GTSAC | 6 cut(s) | 32, 98, 326, 898, 963, 1369 |
| TspDTI | ATGAA | 4 cut(s) | 312, 738, 755, 857 |
| TspGWI | ACGGA | 1 cut(s) | 951 |
| TspRI | CASTG | 2 cut(s) | 48, 854 |
| VpaK11BI | GGWCC | 3 cut(s) | 198, 205, 234 |
| XapI | RAATTY | 3 cut(s) | 543, 863, 1016 |
| XbaI | TCTAGA | 1 cut(s) | 707 |
| XceI | RCATGY | 3 cut(s) | 220, 760, 941 |
| XhoI | CTCGAG | 1 cut(s) | 211 |
| XmiI | GTMKAC | 1 cut(s) | 150 |
| XspI | CTAG | 2 cut(s) | 648, 708 |
| ZraI | GACGTC | 1 cut(s) | 1093 |