Rmu_co8492061.1_g000001

flavin-containing monooxygenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8492061.1
OG0000323
Physical Location & Seq
Forward (+)
1 .. 2331
2331 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8492061.1_g000001.1.cds

Sequence Viewer

Length: 1092 bp
ttccgggactacccttttgtggccaaggaaggagatgaagagagagacccgagaaggtttccgggtcacagagaggtgttgcagtacttgaatgactacgctaccgagtttgggatttacgaggttgtgaggttcgagtgtgaggtggtgtttgtgggtttggtggagggtggaaagtggaaggtgaagtccaagagcaagagaggtgaggttttggaagaggtttatgatgctgtggtggtctgtaatggacatcatactgagcctcgcgtagctcagattccaggcatcaatgcatggaaggggaagcaaattcacagccacaattaccgtaatcctgagccattcagagatcaggttgtaattttgataggcagcggcacaagtgctgttgatatgtctcgggagatagctggagttgctaaagaagtccacattgcatctagagctgttgctgatgaaaccattgaaaagcaccctggctatgataacttgtggcttcactcaatgatcaaaagtgcccatgaagatgggagcgttgttttccaagatgggagtgttgtccatgcagacatcattcttcattgcaccgggtacaagtatcattttccttttctcaaaacgaatggcattgtgactgtggatgacaaccgtgtcggaccactttacaagcatgtctttccacctgcctttgcaccttcgctttccttcgttggtataccatggaaggtcgctcttttcttcatgtttgaacttcaaagcaagtggatagctggtattttgtctaatcgaatggcccttccatcccaagagtacatgatggaggatgtaaaagctttctactctttacttgaagcttctgacacacctaagcgatacactcataacattgctgattatcagtatggatatgaagattgggttgcaactgagtgtgggtgtccagtctctgagaaatggagaaagaagatgtactttgcagctatagagaaaatggttaccaaaccagagacattccgggatgaatggggggaatatgaccatttggtattgcaagctcatgaggacttcaagaaatatgccttgaattga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0004497 GO:0008150 GO:0008152 GO:0016491 GO:0055114
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
FMO-like

Protein Analysis

363

Amino Acids

41.7

Weight (kDa)

5.91

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000323)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G62600 AT1G62600 AT1G62620 AT1G62620 AT1G63370 AT1G63370 AT1G63390
fragaria_vesca FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00210 FvH4_5g00220 FvH4_5g00220 FvH4_5g00230 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36500 FvH4_5g36530 FvH4_5g36860
malus_domestica MD06G1063000.v1.1 MD06G1063100.v1.1
prunus_persica Prupe.5G074800_v2.0.a1 Prupe.5G074900_v2.0.a1 Prupe.8G005000_v2.0.a1
pyrus_communis pycom04g07630 pycom06g06030
rosa_chinensis RchiOBHm_Chr7g0202451 RchiOBHm_Chr7g0202461 RchiOBHm_Chr7g0202471 RchiOBHm_Chr7g0202481 RchiOBHm_Chr7g0202561 RchiOBHm_Chr7g0202571 RchiOBHm_Chr7g0202581 RchiOBHm_Chr7g0202631
rosa_laevigata RLG00000003585 RLG00000003586 RLG00000003588 RLG00000003589 RLG00000003590 RLG00000003594 RLG00000003595 RLG00000003596 RLG00000003597 RLG00000003599 RLG00000003600 RLG00000003601 RLG00000003602 RLG00000029627
rosa_multiflora Rmu_co8483553.1_g000001 Rmu_co8492061.1_g000001 Rmu_sc0000611.1_g000014 Rmu_sc0000611.1_g000020 Rmu_sc0000611.1_g000021 Rmu_sc0001389.1_g000002 Rmu_sc0001389.1_g000004 Rmu_sc0002365.1_g000025 Rmu_sc0031703.1_g000001 Rmu_sc0041226.1_g000001 Rmu_sc0042472.1_g000001 Rmu_sc0042472.1_g000002
rosa_roxburghii Rroxscaffold_3G00254490 Rroxscaffold_3G00254500 Rroxscaffold_3G00254510 Rroxscaffold_3G00254570 Rroxscaffold_3G00254580 Rroxscaffold_3G00254590 Rroxscaffold_3G00254600
rosa_rugosa Rorug07G0070700 Rorug07G0070800 Rorug07G0070900 Rorug07G0071000 Rorug07G0071100 Rorug07G0071300 Rorug07G0071400
rosa_samantha Rh7AG198100 Rh7AG198200 Rh7AG198300 Rh7AG198400 Rh7AG198700 Rh7AG198800 Rh7AG198900 Rh7AG199000 Rh7AG199100 Rh7AG199200 Rh7AG199400 Rh7BG199400 Rh7BG199500 Rh7BG199600 Rh7BG199700 Rh7BG200000 Rh7BG200100 Rh7CG209200 Rh7CG209300 Rh7CG209400 Rh7CG209700 Rh7CG210300 Rh7CG210400 Rh7CG210500 Rh7CG210900 Rh7DG205000 Rh7DG205100 Rh7DG205200 Rh7DG205300 Rh7DG205800 Rh7DG205900 Rh7DG206000 Rh7DG206100 Rh7DG206300
rosa_wichuraiana Rw7G017380 Rw7G017390 Rw7G017400 Rw7G017440 Rw7G017460

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 694
AasI GACNNNNNNGTC 1 cut(s) 653
Acc36I ACCTGC 1 cut(s) 694
AccI GTMKAC 1 cut(s) 718
AccII CGCG 1 cut(s) 270
AciI CCGC 1 cut(s) 378
AcoI YGGCCR 1 cut(s) 21
AcsI RAATTY 1 cut(s) 312
AfaI GTAC 4 cut(s) 86, 596, 815, 974
AfiI CCNNNNNNNGG 2 cut(s) 19, 111
AgsI TTSAA 7 cut(s) 91, 470, 752, 758, 854, 1072, 1087
AjnI CCWGG 2 cut(s) 283, 478
AluBI AGCT 8 cut(s) 275, 413, 449, 773, 836, 857, 983, 1058
AluI AGCT 8 cut(s) 275, 413, 449, 773, 836, 857, 983, 1058
Alw26I GTCTC 4 cut(s) 39, 405, 952, 1004
AlwNI CAGNNNCTG 1 cut(s) 950
Ama87I CYCGRG 2 cut(s) 49, 402
AoxI GGCC 2 cut(s) 21, 795
ApeKI GCWGC 2 cut(s) 375, 980
ApoI RAATTY 1 cut(s) 312
ArsI GACNNNNNNTTYG 1 cut(s) 31
AspS9I GGNCC 2 cut(s) 659, 796
AsuC2I CCSGG 4 cut(s) 5, 63, 592, 1019
AsuHPI GGTGA 2 cut(s) 196, 218
AvaI CYCGRG 2 cut(s) 49, 402
AvaII GGWCC 1 cut(s) 659
BaeGI GKGCMC 1 cut(s) 523
BalI TGGCCA 1 cut(s) 23
BbvI GCAGC 2 cut(s) 387, 992
BccI CCATC 4 cut(s) 524, 545, 811, 814
BciT130I CCWGG 2 cut(s) 285, 480
BclI TGATCA 1 cut(s) 510
BcnI CCSGG 4 cut(s) 5, 63, 592, 1019
BcoDI GTCTC 4 cut(s) 39, 405, 952, 1004
BfaI CTAG 1 cut(s) 444
BfmI CTRYAG 1 cut(s) 984
BfuAI ACCTGC 1 cut(s) 694
BisI GCNGC 3 cut(s) 376, 379, 981
BlsI GCNGC 3 cut(s) 377, 380, 982
BmcAI AGTACT 1 cut(s) 86
Bme1390I CCNGG 6 cut(s) 5, 63, 285, 480, 592, 1019
Bme18I GGWCC 1 cut(s) 659
BmeT110I CYCGRG 2 cut(s) 49, 402
BmgT120I GGNCC 2 cut(s) 659, 796
BmrFI CCNGG 6 cut(s) 5, 63, 285, 480, 592, 1019
BmsI GCATC 3 cut(s) 220, 297, 449
BpmI CTGGAG 1 cut(s) 435
Bpu10I CCTNAGC 2 cut(s) 339, 870
BpuMI CCSGG 4 cut(s) 5, 63, 592, 1019
BsaI GGTCTC 1 cut(s) 39
BsaJI CCNNGG 3 cut(s) 24, 478, 722
Bsc4I CCNNNNNNNGG 2 cut(s) 19, 111
Bse1I ACTGG 1 cut(s) 944
Bse3DI GCAATG 3 cut(s) 435, 583, 888
BseBI CCWGG 2 cut(s) 285, 480
BseDI CCNNGG 3 cut(s) 24, 478, 722
BseGI GGATG 4 cut(s) 649, 803, 832, 1027
BseLI CCNNNNNNNGG 2 cut(s) 19, 111
BseMI GCAATG 3 cut(s) 435, 583, 888
BseMII CTCAG 5 cut(s) 252, 290, 330, 921, 942
BseNI ACTGG 1 cut(s) 944
BseSI GKGCMC 1 cut(s) 523
BseXI GCAGC 2 cut(s) 387, 992
Bsh1236I CGCG 1 cut(s) 270
BshFI GGCC 2 cut(s) 23, 797
BsiHKCI CYCGRG 2 cut(s) 49, 402
BsiSI CCGG 4 cut(s) 4, 62, 591, 1018
BslFI GGGAC 1 cut(s) 20
BslI CCNNNNNNNGG 2 cut(s) 19, 111
BsmAI GTCTC 4 cut(s) 39, 405, 952, 1004
BsmFI GGGAC 1 cut(s) 20
BsnI GGCC 2 cut(s) 23, 797
Bso31I GGTCTC 1 cut(s) 39
BsoBI CYCGRG 2 cut(s) 49, 402
Bsp1286I GDGCHC 1 cut(s) 523
Bsp143I GATC 2 cut(s) 352, 510
Bsp19I CCATGG 1 cut(s) 722
BspACI CCGC 1 cut(s) 378
BspANI GGCC 2 cut(s) 23, 797
BspCNI CTCAG 5 cut(s) 253, 289, 331, 922, 943
BspFNI CGCG 1 cut(s) 270
BspHI TCATGA 1 cut(s) 1060
BspMI ACCTGC 1 cut(s) 694
BspTNI GGTCTC 1 cut(s) 39
BsrDI GCAATG 3 cut(s) 435, 583, 888
BsrI ACTGG 1 cut(s) 944
BssECI CCNNGG 3 cut(s) 24, 478, 722
BssMI GATC 2 cut(s) 352, 510
BssNAI GTATAC 1 cut(s) 719
BssT1I CCWWGG 2 cut(s) 24, 722
Bst1107I GTATAC 1 cut(s) 719
Bst2UI CCWGG 2 cut(s) 285, 480
Bst4CI ACNGT 3 cut(s) 332, 640, 653
Bst6I CTCTTC 2 cut(s) 33, 213
BstC8I GCNNGC 1 cut(s) 1056
BstDEI CTNAG 6 cut(s) 261, 276, 339, 870, 930, 951
BstDSI CCRYGG 1 cut(s) 722
BstEII GGTNACC 1 cut(s) 997
BstF5I GGATG 4 cut(s) 649, 803, 832, 1027
BstFNI CGCG 1 cut(s) 270
BstKTI GATC 2 cut(s) 355, 513
BstMAI GTCTC 4 cut(s) 39, 405, 952, 1004
BstMBI GATC 2 cut(s) 352, 510
BstMWI GCNNNNNNNGC 2 cut(s) 419, 446
BstNI CCWGG 2 cut(s) 285, 480
BstNSI RCATGY 1 cut(s) 677
BstPI GGTNACC 1 cut(s) 997
BstSCI CCNGG 6 cut(s) 3, 61, 283, 478, 590, 1017
BstSFI CTRYAG 1 cut(s) 984
BstSLI GKGCMC 1 cut(s) 523
BstUI CGCG 1 cut(s) 270
BstV1I GCAGC 2 cut(s) 387, 992
BstXI CCANNNNNNTGG 1 cut(s) 530
BstZ17I GTATAC 1 cut(s) 719
BsuRI GGCC 2 cut(s) 23, 797
BtgI CCRYGG 1 cut(s) 722
BtsCI GGATG 4 cut(s) 649, 803, 832, 1027
BveI ACCTGC 1 cut(s) 694
Cac8I GCNNGC 1 cut(s) 1056
CaiI CAGNNNCTG 1 cut(s) 950
CciI TCATGA 1 cut(s) 1060
Cfr13I GGNCC 2 cut(s) 659, 796
Csp6I GTAC 4 cut(s) 85, 595, 814, 973
CspCI CAANNNNNGTGG 2 cut(s) 746, 781
CviAII CATG 8 cut(s) 297, 524, 566, 674, 723, 745, 817, 1061
CviQI GTAC 4 cut(s) 85, 595, 814, 973
DdeI CTNAG 6 cut(s) 261, 276, 339, 870, 930, 951
DpnI GATC 2 cut(s) 354, 512
DpnII GATC 2 cut(s) 352, 510
DrdI GACNNNNNNGTC 1 cut(s) 653
DseDI GACNNNNNNGTC 1 cut(s) 653
EaeI YGGCCR 1 cut(s) 21
Eam1104I CTCTTC 2 cut(s) 33, 213
EarI CTCTTC 2 cut(s) 33, 213
Eco130I CCWWGG 2 cut(s) 24, 722
Eco31I GGTCTC 1 cut(s) 39
Eco47I GGWCC 1 cut(s) 659
Eco88I CYCGRG 2 cut(s) 49, 402
Eco91I GGTNACC 1 cut(s) 997
EcoO65I GGTNACC 1 cut(s) 997
EcoRII CCWGG 2 cut(s) 283, 478
EcoT14I CCWWGG 2 cut(s) 24, 722
EcoT22I ATGCAT 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 24, 722
FaeI CATG 8 cut(s) 300, 527, 569, 677, 726, 748, 820, 1064
FalI AAGNNNNNCTT 4 cut(s) 662, 694, 959, 991
FaqI GGGAC 1 cut(s) 20
FatI CATG 8 cut(s) 296, 523, 565, 673, 722, 744, 816, 1060
FbaI TGATCA 1 cut(s) 510
FblI GTMKAC 1 cut(s) 718
Fnu4HI GCNGC 3 cut(s) 376, 379, 981
FokI GGATG 4 cut(s) 656, 790, 839, 1034
Fsp4HI GCNGC 3 cut(s) 376, 379, 981
FspBI CTAG 1 cut(s) 444
GluI GCNGC 3 cut(s) 376, 379, 981
GsuI CTGGAG 1 cut(s) 435
HaeIII GGCC 2 cut(s) 23, 797
HapII CCGG 4 cut(s) 4, 62, 591, 1018
Hin1II CATG 8 cut(s) 300, 527, 569, 677, 726, 748, 820, 1064
HindIII AAGCTT 2 cut(s) 834, 855
HinfI GANTC 1 cut(s) 280
HpaII CCGG 4 cut(s) 4, 62, 591, 1018
HphI GGTGA 2 cut(s) 196, 218
Hpy166II GTNNAC 2 cut(s) 433, 719
Hpy188I TCNGA 5 cut(s) 279, 350, 659, 862, 952
Hpy188III TCNNGA 5 cut(s) 338, 404, 444, 1061, 1072
Hpy8I GTNNAC 2 cut(s) 433, 719
HpyAV CCTTC 8 cut(s) 23, 48, 175, 295, 708, 718, 721, 809
HpyCH4III ACNGT 3 cut(s) 332, 640, 653
HpyCH4V TGCA 9 cut(s) 82, 296, 440, 569, 588, 695, 926, 980, 1054
HpyF10VI GCNNNNNNNGC 2 cut(s) 419, 446
HpyF3I CTNAG 6 cut(s) 261, 276, 339, 870, 930, 951
Hsp92II CATG 8 cut(s) 300, 527, 569, 677, 726, 748, 820, 1064
Ksp22I TGATCA 1 cut(s) 510
Kzo9I GATC 2 cut(s) 352, 510
LmnI GCTCC 1 cut(s) 534
Lsp1109I GCAGC 2 cut(s) 387, 992
LweI GCATC 3 cut(s) 220, 297, 449
MaeI CTAG 1 cut(s) 444
MaeIII GTNAC 3 cut(s) 65, 634, 997
MalI GATC 2 cut(s) 354, 512
MboI GATC 2 cut(s) 352, 510
MboII GAAGA 7 cut(s) 50, 230, 539, 572, 733, 926, 979
MhlI GDGCHC 1 cut(s) 523
MlsI TGGCCA 1 cut(s) 23
MluCI AATT 4 cut(s) 312, 325, 363, 1087
MluNI TGGCCA 1 cut(s) 23
MmeI TCCRAC 1 cut(s) 637
Mox20I TGGCCA 1 cut(s) 23
Mph1103I ATGCAT 1 cut(s) 298
MscI TGGCCA 1 cut(s) 23
MslI CAYNNNNRTG 1 cut(s) 528
Msp20I TGGCCA 1 cut(s) 23
MspA1I CMGCKG 1 cut(s) 378
MspI CCGG 4 cut(s) 4, 62, 591, 1018
MspR9I CCNGG 6 cut(s) 5, 63, 285, 480, 592, 1019
MvaI CCWGG 2 cut(s) 285, 480
MvnI CGCG 1 cut(s) 270
MwoI GCNNNNNNNGC 2 cut(s) 419, 446
NciI CCSGG 4 cut(s) 5, 63, 592, 1019
NcoI CCATGG 1 cut(s) 722
NdeII GATC 2 cut(s) 352, 510
NlaIII CATG 8 cut(s) 300, 527, 569, 677, 726, 748, 820, 1064
NmuCI GTSAC 2 cut(s) 65, 634
NsiI ATGCAT 1 cut(s) 298
NspI RCATGY 1 cut(s) 677
PagI TCATGA 1 cut(s) 1060
PaqCI CACCTGC 1 cut(s) 694
PfeI GAWTC 1 cut(s) 280
PfoI TCCNGGA 2 cut(s) 3, 1017
PkrI GCNGC 3 cut(s) 377, 380, 982
Psp6I CCWGG 2 cut(s) 283, 478
PspEI GGTNACC 1 cut(s) 997
PspGI CCWGG 2 cut(s) 283, 478
PspPI GGNCC 2 cut(s) 659, 796
PstNI CAGNNNCTG 1 cut(s) 950
RsaI GTAC 4 cut(s) 86, 596, 815, 974
RsaNI GTAC 4 cut(s) 85, 595, 814, 973
RseI CAYNNNNRTG 1 cut(s) 528
SatI GCNGC 3 cut(s) 376, 379, 981
Sau3AI GATC 2 cut(s) 352, 510
Sau96I GGNCC 2 cut(s) 659, 796
ScaI AGTACT 1 cut(s) 86
ScrFI CCNGG 6 cut(s) 5, 63, 285, 480, 592, 1019
SduI GDGCHC 1 cut(s) 523
SfaNI GCATC 3 cut(s) 220, 297, 449
SfcI CTRYAG 1 cut(s) 984
SinI GGWCC 1 cut(s) 659
SmiMI CAYNNNNRTG 1 cut(s) 528
Sse9I AATT 4 cut(s) 312, 325, 363, 1087
SsiI CCGC 1 cut(s) 378
SspMI CTAG 1 cut(s) 444
StyD4I CCNGG 6 cut(s) 3, 61, 283, 478, 590, 1017
StyI CCWWGG 2 cut(s) 24, 722
TaaI ACNGT 3 cut(s) 332, 640, 653
TaqI TCGA 2 cut(s) 135, 790
TasI AATT 4 cut(s) 312, 325, 363, 1087
TatI WGTACW 3 cut(s) 84, 813, 972
TauI GCSGC 1 cut(s) 381
TfiI GAWTC 1 cut(s) 280
TseFI GTSAC 2 cut(s) 65, 634
TseI GCWGC 2 cut(s) 375, 980
Tsp45I GTSAC 2 cut(s) 65, 634
TspDTI ATGAA 7 cut(s) 51, 474, 540, 572, 733, 927, 1038
VpaK11BI GGWCC 1 cut(s) 659
XapI RAATTY 1 cut(s) 312
XbaI TCTAGA 1 cut(s) 443
XceI RCATGY 1 cut(s) 677
XmiI GTMKAC 1 cut(s) 718
XspI CTAG 1 cut(s) 444
ZrmI AGTACT 1 cut(s) 86
Zsp2I ATGCAT 1 cut(s) 298
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.