flavin-containing monooxygenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FMO-like | PF00743 | 17 - 232 | 5.3e-26 | Flavin-binding monooxygenase-like |
| Pyr_redox_2 | PF07992 | 17 - 232 | 1.4e-06 | Pyridine nucleotide-disulphide oxidoreductase |
| Amino_oxidase | PF01593 | 17 - 133 | 7.5e-06 | Flavin containing amine oxidoreductase |
| Pyr_redox_3 | PF13738 | 73 - 239 | 1.6e-12 | Pyridine nucleotide-disulphide oxidoreductase |
| FMO-like | PF00743 | 237 - 346 | 5.1e-12 | Flavin-binding monooxygenase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1254 |
| AarI | CACCTGC | 1 cut(s) | 889 |
| Acc16I | TGCGCA | 1 cut(s) | 1125 |
| Acc36I | ACCTGC | 1 cut(s) | 889 |
| Acc65I | GGTACC | 1 cut(s) | 913 |
| AccB1I | GGYRCC | 3 cut(s) | 889, 913, 1388 |
| AccI | GTMKAC | 1 cut(s) | 135 |
| AccIII | TCCGGA | 1 cut(s) | 249 |
| AciI | CCGC | 7 cut(s) | 42, 56, 59, 76, 1369, 1398, 1429 |
| AclWI | GGATC | 2 cut(s) | 176, 687 |
| AcoI | YGGCCR | 2 cut(s) | 267, 1199 |
| AcsI | RAATTY | 3 cut(s) | 525, 558, 1268 |
| AcvI | CACGTG | 2 cut(s) | 65, 1418 |
| AcyI | GRCGYC | 1 cut(s) | 1389 |
| AfaI | GTAC | 3 cut(s) | 785, 915, 1242 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 47, 265 |
| AgsI | TTSAA | 7 cut(s) | 103, 337, 865, 953, 1049, 1264, 1289 |
| AjnI | CCWGG | 1 cut(s) | 529 |
| AluBI | AGCT | 9 cut(s) | 29, 70, 540, 624, 659, 1031, 1052, 1250, 1423 |
| AluI | AGCT | 9 cut(s) | 29, 70, 540, 624, 659, 1031, 1052, 1250, 1423 |
| Alw21I | GWGCWC | 3 cut(s) | 72, 626, 1425 |
| Alw26I | GTCTC | 4 cut(s) | 105, 216, 285, 803 |
| AlwI | GGATC | 2 cut(s) | 176, 687 |
| Ama87I | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| Aor13HI | TCCGGA | 1 cut(s) | 249 |
| AoxI | GGCC | 4 cut(s) | 267, 854, 1199, 1402 |
| ApeKI | GCWGC | 2 cut(s) | 1121, 1412 |
| ApoI | RAATTY | 3 cut(s) | 525, 558, 1268 |
| AseI | ATTAAT | 1 cut(s) | 639 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 341 |
| Asp718I | GGTACC | 1 cut(s) | 913 |
| AspLEI | GCGC | 4 cut(s) | 994, 1126, 1391, 1397 |
| AspS9I | GGNCC | 4 cut(s) | 157, 190, 219, 854 |
| AsuC2I | CCSGG | 1 cut(s) | 309 |
| AsuHPI | GGTGA | 3 cut(s) | 385, 1112, 1264 |
| AsuII | TTCGAA | 1 cut(s) | 1146 |
| AvaI | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| AvaII | GGWCC | 3 cut(s) | 157, 190, 219 |
| BaeGI | GKGCMC | 1 cut(s) | 501 |
| BalI | TGGCCA | 1 cut(s) | 269 |
| BanI | GGYRCC | 3 cut(s) | 889, 913, 1388 |
| BanII | GRGCYC | 3 cut(s) | 72, 626, 1425 |
| BauI | CACGAG | 1 cut(s) | 513 |
| BbrPI | CACGTG | 2 cut(s) | 65, 1418 |
| BbsI | GAAGAC | 4 cut(s) | 865, 929, 1135, 1444 |
| Bbv12I | GWGCWC | 3 cut(s) | 72, 626, 1425 |
| BbvI | GCAGC | 2 cut(s) | 1108, 1424 |
| BccI | CCATC | 6 cut(s) | 364, 421, 827, 1006, 1009, 1274 |
| BciT130I | CCWGG | 1 cut(s) | 531 |
| BcnI | CCSGG | 1 cut(s) | 309 |
| BcoDI | GTCTC | 4 cut(s) | 105, 216, 285, 803 |
| BfaI | CTAG | 3 cut(s) | 161, 630, 690 |
| BfoI | RGCGCY | 1 cut(s) | 1392 |
| BfuAI | ACCTGC | 1 cut(s) | 889 |
| BisI | GCNGC | 5 cut(s) | 57, 60, 1122, 1398, 1413 |
| BlsI | GCNGC | 5 cut(s) | 58, 61, 1123, 1399, 1414 |
| BmcAI | AGTACT | 1 cut(s) | 1242 |
| Bme1390I | CCNGG | 2 cut(s) | 309, 531 |
| Bme18I | GGWCC | 3 cut(s) | 157, 190, 219 |
| BmeT110I | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| BmgT120I | GGNCC | 4 cut(s) | 157, 190, 219, 854 |
| BmiI | GGNNCC | 4 cut(s) | 248, 891, 915, 1390 |
| BmrFI | CCNGG | 2 cut(s) | 309, 531 |
| BmsI | GCATC | 4 cut(s) | 46, 466, 543, 695 |
| BpiI | GAAGAC | 4 cut(s) | 865, 929, 1135, 1444 |
| BpmI | CTGGAG | 3 cut(s) | 56, 126, 681 |
| Bpu14I | TTCGAA | 1 cut(s) | 1146 |
| BpuEI | CTTGAG | 3 cut(s) | 181, 401, 827 |
| BpuMI | CCSGG | 1 cut(s) | 309 |
| BsaAI | YACGTR | 3 cut(s) | 65, 1375, 1418 |
| BsaHI | GRCGYC | 1 cut(s) | 1389 |
| BsaI | GGTCTC | 3 cut(s) | 105, 285, 803 |
| BsaJI | CCNNGG | 2 cut(s) | 186, 917 |
| BsaWI | WCCGGW | 1 cut(s) | 249 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 54, 84, 1407, 1437 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 47, 265 |
| Bse1I | ACTGG | 2 cut(s) | 208, 1139 |
| Bse3DI | GCAATG | 1 cut(s) | 1133 |
| BseAI | TCCGGA | 1 cut(s) | 249 |
| BseBI | CCWGG | 1 cut(s) | 531 |
| BseDI | CCNNGG | 2 cut(s) | 186, 917 |
| BseGI | GGATG | 9 cut(s) | 37, 432, 838, 844, 998, 1027, 1222, 1231, 1345 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 47, 265 |
| BseMI | GCAATG | 1 cut(s) | 1133 |
| BseMII | CTCAG | 3 cut(s) | 229, 357, 576 |
| BseNI | ACTGG | 2 cut(s) | 208, 1139 |
| BseRI | GAGGAG | 1 cut(s) | 123 |
| BseSI | GKGCMC | 1 cut(s) | 501 |
| BseXI | GCAGC | 2 cut(s) | 1108, 1424 |
| BsgI | GTGCAG | 1 cut(s) | 760 |
| BshFI | GGCC | 4 cut(s) | 269, 856, 1201, 1404 |
| BshNI | GGYRCC | 3 cut(s) | 889, 913, 1388 |
| BsiHKAI | GWGCWC | 3 cut(s) | 72, 626, 1425 |
| BsiHKCI | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| BsiSI | CCGG | 4 cut(s) | 250, 308, 1198, 1426 |
| BslFI | GGGAC | 1 cut(s) | 665 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 47, 265 |
| BsmAI | GTCTC | 4 cut(s) | 105, 216, 285, 803 |
| BsmFI | GGGAC | 1 cut(s) | 665 |
| BsnI | GGCC | 4 cut(s) | 269, 856, 1201, 1404 |
| Bso31I | GGTCTC | 3 cut(s) | 105, 285, 803 |
| BsoBI | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| Bsp119I | TTCGAA | 1 cut(s) | 1146 |
| Bsp1286I | GDGCHC | 4 cut(s) | 72, 501, 626, 1425 |
| Bsp13I | TCCGGA | 1 cut(s) | 249 |
| Bsp143I | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| Bsp19I | CCATGG | 1 cut(s) | 917 |
| BspACI | CCGC | 7 cut(s) | 42, 56, 59, 76, 1369, 1398, 1429 |
| BspANI | GGCC | 4 cut(s) | 269, 856, 1201, 1404 |
| BspCNI | CTCAG | 3 cut(s) | 228, 358, 577 |
| BspEI | TCCGGA | 1 cut(s) | 249 |
| BspHI | TCATGA | 1 cut(s) | 1078 |
| BspLI | GGNNCC | 4 cut(s) | 248, 891, 915, 1390 |
| BspMI | ACCTGC | 1 cut(s) | 889 |
| BspPI | GGATC | 2 cut(s) | 176, 687 |
| BspT104I | TTCGAA | 1 cut(s) | 1146 |
| BspT107I | GGYRCC | 3 cut(s) | 889, 913, 1388 |
| BspTNI | GGTCTC | 3 cut(s) | 105, 285, 803 |
| BsrDI | GCAATG | 1 cut(s) | 1133 |
| BsrI | ACTGG | 2 cut(s) | 208, 1139 |
| BssECI | CCNNGG | 2 cut(s) | 186, 917 |
| BssMI | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| BssNI | GRCGYC | 1 cut(s) | 1389 |
| BssSI | CACGAG | 1 cut(s) | 513 |
| BssT1I | CCWWGG | 1 cut(s) | 917 |
| Bst2BI | CACGAG | 1 cut(s) | 513 |
| Bst2UI | CCWGG | 1 cut(s) | 531 |
| Bst4CI | ACNGT | 7 cut(s) | 91, 190, 848, 861, 928, 1177, 1444 |
| Bst6I | CTCTTC | 3 cut(s) | 279, 459, 1045 |
| BstACI | GRCGYC | 1 cut(s) | 1389 |
| BstBAI | YACGTR | 3 cut(s) | 65, 1375, 1418 |
| BstBI | TTCGAA | 1 cut(s) | 1146 |
| BstC8I | GCNNGC | 5 cut(s) | 203, 349, 1119, 1393, 1402 |
| BstDEI | CTNAG | 3 cut(s) | 215, 366, 585 |
| BstDSI | CCRYGG | 2 cut(s) | 186, 917 |
| BstF5I | GGATG | 9 cut(s) | 37, 432, 838, 844, 998, 1027, 1222, 1231, 1345 |
| BstH2I | RGCGCY | 1 cut(s) | 1392 |
| BstHHI | GCGC | 4 cut(s) | 994, 1126, 1391, 1397 |
| BstKTI | GATC | 5 cut(s) | 171, 240, 601, 695, 1386 |
| BstMAI | GTCTC | 4 cut(s) | 105, 216, 285, 803 |
| BstMBI | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 26, 665, 1123, 1340, 1397, 1401 |
| BstNI | CCWGG | 1 cut(s) | 531 |
| BstNSI | RCATGY | 2 cut(s) | 205, 872 |
| BstSCI | CCNGG | 2 cut(s) | 307, 529 |
| BstSLI | GKGCMC | 1 cut(s) | 501 |
| BstV1I | GCAGC | 2 cut(s) | 1108, 1424 |
| BstV2I | GAAGAC | 4 cut(s) | 865, 929, 1135, 1444 |
| BstX2I | RGATCY | 1 cut(s) | 692 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 52, 122 |
| BstYI | RGATCY | 1 cut(s) | 692 |
| BsuRI | GGCC | 4 cut(s) | 269, 856, 1201, 1404 |
| BtgI | CCRYGG | 2 cut(s) | 186, 917 |
| BtgZI | GCGATG | 1 cut(s) | 667 |
| BtsCI | GGATG | 9 cut(s) | 37, 432, 838, 844, 998, 1027, 1222, 1231, 1345 |
| BtsI | GCAGTG | 2 cut(s) | 772, 1306 |
| BtsIMutI | CAGTG | 5 cut(s) | 87, 772, 857, 1306, 1440 |
| BveI | ACCTGC | 1 cut(s) | 889 |
| Cac8I | GCNNGC | 5 cut(s) | 203, 349, 1119, 1393, 1402 |
| CciI | TCATGA | 1 cut(s) | 1078 |
| CfoI | GCGC | 4 cut(s) | 994, 1126, 1391, 1397 |
| Cfr13I | GGNCC | 4 cut(s) | 157, 190, 219, 854 |
| Csp6I | GTAC | 3 cut(s) | 784, 914, 1241 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 867, 902, 941, 976 |
| CviAII | CATG | 6 cut(s) | 202, 241, 543, 869, 918, 1079 |
| CviQI | GTAC | 3 cut(s) | 784, 914, 1241 |
| DdeI | CTNAG | 3 cut(s) | 215, 366, 585 |
| DinI | GGCGCC | 1 cut(s) | 1390 |
| DpnI | GATC | 5 cut(s) | 170, 239, 600, 694, 1385 |
| DpnII | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| EaeI | YGGCCR | 2 cut(s) | 267, 1199 |
| Eam1104I | CTCTTC | 3 cut(s) | 279, 459, 1045 |
| EarI | CTCTTC | 3 cut(s) | 279, 459, 1045 |
| Ecl136II | GAGCTC | 3 cut(s) | 70, 624, 1423 |
| Eco130I | CCWWGG | 1 cut(s) | 917 |
| Eco147I | AGGCCT | 1 cut(s) | 1404 |
| Eco24I | GRGCYC | 3 cut(s) | 72, 626, 1425 |
| Eco31I | GGTCTC | 3 cut(s) | 105, 285, 803 |
| Eco47I | GGWCC | 3 cut(s) | 157, 190, 219 |
| Eco53kI | GAGCTC | 3 cut(s) | 70, 624, 1423 |
| Eco72I | CACGTG | 2 cut(s) | 65, 1418 |
| Eco88I | CYCGRG | 3 cut(s) | 295, 648, 1095 |
| EcoICRI | GAGCTC | 3 cut(s) | 70, 624, 1423 |
| EcoRII | CCWGG | 1 cut(s) | 529 |
| EcoT14I | CCWWGG | 1 cut(s) | 917 |
| EcoT22I | ATGCAT | 1 cut(s) | 39 |
| EcoT38I | GRGCYC | 3 cut(s) | 72, 626, 1425 |
| EgeI | GGCGCC | 1 cut(s) | 1390 |
| EheI | GGCGCC | 1 cut(s) | 1390 |
| ErhI | CCWWGG | 1 cut(s) | 917 |
| FaeI | CATG | 6 cut(s) | 205, 244, 546, 872, 921, 1082 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 857, 889 |
| FaqI | GGGAC | 1 cut(s) | 665 |
| FatI | CATG | 6 cut(s) | 201, 240, 542, 868, 917, 1078 |
| FauI | CCCGC | 4 cut(s) | 49, 69, 1376, 1422 |
| FblI | GTMKAC | 1 cut(s) | 135 |
| Fnu4HI | GCNGC | 5 cut(s) | 57, 60, 1122, 1398, 1413 |
| FokI | GGATG | 9 cut(s) | 24, 439, 845, 851, 985, 1034, 1229, 1238, 1332 |
| FriOI | GRGCYC | 3 cut(s) | 72, 626, 1425 |
| Fsp4HI | GCNGC | 5 cut(s) | 57, 60, 1122, 1398, 1413 |
| FspBI | CTAG | 3 cut(s) | 161, 630, 690 |
| FspI | TGCGCA | 1 cut(s) | 1125 |
| GlaI | GCGC | 4 cut(s) | 993, 1125, 1390, 1396 |
| GluI | GCNGC | 5 cut(s) | 57, 60, 1122, 1398, 1413 |
| GsuI | CTGGAG | 3 cut(s) | 56, 126, 681 |
| HaeII | RGCGCY | 1 cut(s) | 1392 |
| HaeIII | GGCC | 4 cut(s) | 269, 856, 1201, 1404 |
| HapII | CCGG | 4 cut(s) | 250, 308, 1198, 1426 |
| HhaI | GCGC | 4 cut(s) | 994, 1126, 1391, 1397 |
| Hin1I | GRCGYC | 1 cut(s) | 1389 |
| Hin1II | CATG | 6 cut(s) | 205, 244, 546, 872, 921, 1082 |
| Hin6I | GCGC | 4 cut(s) | 992, 1124, 1389, 1395 |
| HinP1I | GCGC | 4 cut(s) | 992, 1124, 1389, 1395 |
| HincII | GTYRAC | 2 cut(s) | 327, 1173 |
| HindII | GTYRAC | 2 cut(s) | 327, 1173 |
| HindIII | AAGCTT | 3 cut(s) | 1029, 1050, 1248 |
| HinfI | GANTC | 2 cut(s) | 8, 152 |
| HpaI | GTTAAC | 1 cut(s) | 1173 |
| HpaII | CCGG | 4 cut(s) | 250, 308, 1198, 1426 |
| HphI | GGTGA | 3 cut(s) | 385, 1112, 1264 |
| Hpy166II | GTNNAC | 5 cut(s) | 136, 193, 327, 679, 1173 |
| Hpy188I | TCNGA | 7 cut(s) | 157, 367, 579, 586, 709, 946, 1350 |
| Hpy8I | GTNNAC | 5 cut(s) | 136, 193, 327, 679, 1173 |
| Hpy99I | CGWCG | 2 cut(s) | 1412, 1451 |
| HpyAV | CCTTC | 5 cut(s) | 74, 236, 294, 331, 1427 |
| HpyCH4III | ACNGT | 7 cut(s) | 91, 190, 848, 861, 928, 1177, 1444 |
| HpyCH4IV | ACGT | 3 cut(s) | 64, 1374, 1417 |
| HpyCH4V | TGCA | 6 cut(s) | 37, 205, 521, 737, 777, 1357 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 26, 665, 1123, 1340, 1397, 1401 |
| HpyF3I | CTNAG | 3 cut(s) | 215, 366, 585 |
| HpySE526I | ACGT | 3 cut(s) | 64, 1374, 1417 |
| Hsp92I | GRCGYC | 1 cut(s) | 1389 |
| Hsp92II | CATG | 6 cut(s) | 205, 244, 546, 872, 921, 1082 |
| HspAI | GCGC | 4 cut(s) | 992, 1124, 1389, 1395 |
| KasI | GGCGCC | 1 cut(s) | 1388 |
| Kpn2I | TCCGGA | 1 cut(s) | 249 |
| KpnI | GGTACC | 1 cut(s) | 917 |
| KspAI | GTTAAC | 1 cut(s) | 1173 |
| Kzo9I | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| LmnI | GCTCC | 4 cut(s) | 75, 621, 999, 1428 |
| Lsp1109I | GCAGC | 2 cut(s) | 1108, 1424 |
| LweI | GCATC | 4 cut(s) | 46, 466, 543, 695 |
| MaeI | CTAG | 3 cut(s) | 161, 630, 690 |
| MaeII | ACGT | 3 cut(s) | 64, 1374, 1417 |
| MaeIII | GTNAC | 3 cut(s) | 83, 823, 1436 |
| MalI | GATC | 5 cut(s) | 170, 239, 600, 694, 1385 |
| MboI | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| MflI | RGATCY | 1 cut(s) | 692 |
| MhlI | GDGCHC | 4 cut(s) | 72, 501, 626, 1425 |
| MlsI | TGGCCA | 1 cut(s) | 269 |
| MluCI | AATT | 8 cut(s) | 525, 558, 571, 940, 987, 1090, 1186, 1268 |
| MluNI | TGGCCA | 1 cut(s) | 269 |
| Mly113I | GGCGCC | 1 cut(s) | 1389 |
| MlyI | GAGTC | 1 cut(s) | 161 |
| MmeI | TCCRAC | 2 cut(s) | 135, 1373 |
| Mox20I | TGGCCA | 1 cut(s) | 269 |
| Mph1103I | ATGCAT | 1 cut(s) | 39 |
| MroI | TCCGGA | 1 cut(s) | 249 |
| MroXI | GAANNNNTTC | 1 cut(s) | 341 |
| MscI | TGGCCA | 1 cut(s) | 269 |
| MseI | TTAA | 3 cut(s) | 432, 639, 1172 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1077 |
| Msp20I | TGGCCA | 1 cut(s) | 269 |
| MspA1I | CMGCKG | 1 cut(s) | 76 |
| MspI | CCGG | 4 cut(s) | 250, 308, 1198, 1426 |
| MspR9I | CCNGG | 2 cut(s) | 309, 531 |
| MvaI | CCWGG | 1 cut(s) | 531 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 26, 665, 1123, 1340, 1397, 1401 |
| NarI | GGCGCC | 1 cut(s) | 1389 |
| NciI | CCSGG | 1 cut(s) | 309 |
| NcoI | CCATGG | 1 cut(s) | 917 |
| NdeII | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| NlaIII | CATG | 6 cut(s) | 205, 244, 546, 872, 921, 1082 |
| NlaIV | GGNNCC | 4 cut(s) | 248, 891, 915, 1390 |
| NmuCI | GTSAC | 2 cut(s) | 83, 1436 |
| NsbI | TGCGCA | 1 cut(s) | 1125 |
| NsiI | ATGCAT | 1 cut(s) | 39 |
| NspI | RCATGY | 2 cut(s) | 205, 872 |
| NspV | TTCGAA | 1 cut(s) | 1146 |
| PaeI | GCATGC | 1 cut(s) | 205 |
| PagI | TCATGA | 1 cut(s) | 1078 |
| PaqCI | CACCTGC | 1 cut(s) | 889 |
| PceI | AGGCCT | 1 cut(s) | 1404 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1452 |
| PdmI | GAANNNNTTC | 1 cut(s) | 341 |
| PfeI | GAWTC | 1 cut(s) | 8 |
| PkrI | GCNGC | 5 cut(s) | 58, 61, 1123, 1399, 1414 |
| PleI | GAGTC | 1 cut(s) | 160 |
| PluTI | GGCGCC | 1 cut(s) | 1392 |
| PmaCI | CACGTG | 2 cut(s) | 65, 1418 |
| PmlI | CACGTG | 2 cut(s) | 65, 1418 |
| PpsI | GAGTC | 1 cut(s) | 160 |
| Ppu21I | YACGTR | 3 cut(s) | 65, 1375, 1418 |
| PshBI | ATTAAT | 1 cut(s) | 639 |
| PsiI | TTATAA | 1 cut(s) | 1254 |
| Psp124BI | GAGCTC | 3 cut(s) | 72, 626, 1425 |
| Psp6I | CCWGG | 1 cut(s) | 529 |
| PspCI | CACGTG | 2 cut(s) | 65, 1418 |
| PspGI | CCWGG | 1 cut(s) | 529 |
| PspN4I | GGNNCC | 4 cut(s) | 248, 891, 915, 1390 |
| PspPI | GGNCC | 4 cut(s) | 157, 190, 219, 854 |
| PsuI | RGATCY | 1 cut(s) | 692 |
| RsaI | GTAC | 3 cut(s) | 785, 915, 1242 |
| RsaNI | GTAC | 3 cut(s) | 784, 914, 1241 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1077 |
| SacI | GAGCTC | 3 cut(s) | 72, 626, 1425 |
| SaqAI | TTAA | 3 cut(s) | 432, 639, 1172 |
| SatI | GCNGC | 5 cut(s) | 57, 60, 1122, 1398, 1413 |
| Sau3AI | GATC | 5 cut(s) | 168, 237, 598, 692, 1383 |
| Sau96I | GGNCC | 4 cut(s) | 157, 190, 219, 854 |
| ScaI | AGTACT | 1 cut(s) | 1242 |
| SchI | GAGTC | 1 cut(s) | 161 |
| ScrFI | CCNGG | 2 cut(s) | 309, 531 |
| SduI | GDGCHC | 4 cut(s) | 72, 501, 626, 1425 |
| SfaNI | GCATC | 4 cut(s) | 46, 466, 543, 695 |
| SfoI | GGCGCC | 1 cut(s) | 1390 |
| SfuI | TTCGAA | 1 cut(s) | 1146 |
| SinI | GGWCC | 3 cut(s) | 157, 190, 219 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1077 |
| SmlI | CTYRAG | 3 cut(s) | 196, 380, 806 |
| SmoI | CTYRAG | 3 cut(s) | 196, 380, 806 |
| SphI | GCATGC | 1 cut(s) | 205 |
| Sse9I | AATT | 8 cut(s) | 525, 558, 571, 940, 987, 1090, 1186, 1268 |
| SseBI | AGGCCT | 1 cut(s) | 1404 |
| SsiI | CCGC | 7 cut(s) | 42, 56, 59, 76, 1369, 1398, 1429 |
| SspDI | GGCGCC | 1 cut(s) | 1388 |
| SspI | AATATT | 1 cut(s) | 643 |
| SspMI | CTAG | 3 cut(s) | 161, 630, 690 |
| SstI | GAGCTC | 3 cut(s) | 72, 626, 1425 |
| StuI | AGGCCT | 1 cut(s) | 1404 |
| StyD4I | CCNGG | 2 cut(s) | 307, 529 |
| StyI | CCWWGG | 1 cut(s) | 917 |
| TaaI | ACNGT | 7 cut(s) | 91, 190, 848, 861, 928, 1177, 1444 |
| TaiI | ACGT | 3 cut(s) | 67, 1377, 1420 |
| TaqI | TCGA | 5 cut(s) | 171, 595, 985, 1146, 1455 |
| TasI | AATT | 8 cut(s) | 525, 558, 571, 940, 987, 1090, 1186, 1268 |
| TatI | WGTACW | 1 cut(s) | 1240 |
| TauI | GCSGC | 3 cut(s) | 59, 62, 1400 |
| TfiI | GAWTC | 1 cut(s) | 8 |
| Tru1I | TTAA | 3 cut(s) | 432, 639, 1172 |
| Tru9I | TTAA | 3 cut(s) | 432, 639, 1172 |
| TscAI | CASTG | 5 cut(s) | 94, 779, 864, 1306, 1447 |
| TseFI | GTSAC | 2 cut(s) | 83, 1436 |
| TseI | GCWGC | 2 cut(s) | 1121, 1412 |
| Tsp45I | GTSAC | 2 cut(s) | 83, 1436 |
| TspDTI | ATGAA | 2 cut(s) | 297, 756 |
| TspRI | CASTG | 5 cut(s) | 94, 779, 864, 1306, 1447 |
| VpaK11BI | GGWCC | 3 cut(s) | 157, 190, 219 |
| VspI | ATTAAT | 1 cut(s) | 639 |
| XapI | RAATTY | 3 cut(s) | 525, 558, 1268 |
| XbaI | TCTAGA | 1 cut(s) | 689 |
| XceI | RCATGY | 2 cut(s) | 205, 872 |
| XmiI | GTMKAC | 1 cut(s) | 135 |
| XmnI | GAANNNNTTC | 1 cut(s) | 341 |
| XspI | CTAG | 3 cut(s) | 161, 630, 690 |
| ZrmI | AGTACT | 1 cut(s) | 1242 |
| Zsp2I | ATGCAT | 1 cut(s) | 39 |