AT1G76530

auxin efflux carrier family protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Forward (+)
28718069 .. 28720371
2303 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G76530.1

Sequence Viewer

Length: 1248 bp
ATGAAGCTTTTGGAGTTGTTCATAGCTTCATCGAAACCAGTTGTGGAGACTTTGTTGATAACATCAGTTGGATTTTATTTGGCTCTCGACACAGTCAATCTTCTTGGTCATGATGCTCGCAAACATTTGAACAACATTGTCTTCTATGTGTTTAGTCCTTCGCTTATTGGAAGCCGCTTAGCTGATAGTGTTACATATGAAAGCTTGGTCAAAATGTGGTTTATGCCGGTTAATGTTCTGCTCACATTCATGATTGGTTCGTTACTCGGCTGGATTGTTATTGTCATAACTAAGCCTCCTTCACAGCTTCGTGGTCTCATCATTAGTTGTTGTGCTTCTGGGAATTTGGGGACTATGCCTCTCATTATAATCCCAGCCATTTGCAAGGAGAAAGGAGGTCCCTTTGGAGATTCTGAGAGTTGCGAGAAATACGGAATGGGTTATGTTACACTGTCCATGACTGCTTTTTTTATCAGTGTGTATAAACATGACACTAATTGGTATGTATCAGGCGGGAACGGTTTACTCATGGACTTATATATAAATCTTATGCGTGTGCTATCAAACTCTCCCGTTGAAACACACACACACTCTATTGAATCCAACTATGATGACAGCTGCAAAGTCCAACTAATTTCTTCCAAGGAAGAAGAAAAAGAAGAAGACAACCATCAGGTTGGGAGGTGGGAAGAAGTCAAGCAAAGAGTTGTTTCTCTGTCAAAGAAAGTCAACCTTGGGTCAATATTTGCTCCAGCAACTATTGCTGCAATTATCGCGCTTGTGATTGGGCTTATTACTCCTTTAAGGAACCTAATAATCGGCACCGTAGCTCCTTTCCGTGTGATTCAAGACTCATTAACCCTATTGGGAGATGGGGCCATTCCTGCTATGACCCTGATTCTTGGAGGAAACTTACTTAAAGGAATGAGGAGGTCGGAAGTGAGGAGTTCAGAAATGAAAAACTCCTGCATTATCGGCGTCTTGGTAGCTCGTTACATTTTGCTACCTGTAAGCGGTGTTTTACTCGTGAGAGGAGCATACAAGTTGGATTTAGTAACCTCAGAACCCTTGTACCAATTCGTTCTTCTTCTTCAGTATGCTGTCCCACCAGCCATGAATCTAGGTACAAAGACCCAATTATTCGGCGCTGGGGAGAGTGAATGCTCTGTGATTATGCTTTGGACTTACTCTTTGGCTGCAGTTTCACTCACTGTTTGGCCAACATTCTTCATGTGGCTTGTGACATAA

Protein Analysis

415

Amino Acids

45.59

Weight (kDa)

7.0

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 11 - 406 1e-94 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000423)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76520 AT1G76520 AT1G76530 AT1G76530 AT1G76530
fragaria_vesca FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26370 FvH4_5g26370
malus_domestica MD05G1225800.v1.1 MD06G1002600.v1.1 MD06G1002700.v1.1
prunus_persica Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004300_v2.0.a1
pyrus_communis pycom05g20790 pycom06g00270 pycom06g00280
rosa_chinensis RchiOBHm_Chr7g0217021 RchiOBHm_Chr7g0217081 RchiOBHm_Chr7g0217111 RchiOBHm_Chr7g0217141 RchiOBHm_Chr7g0217181 RchiOBHm_Chr7g0219341
rosa_laevigata RLG00000002504 RLG00000002506 RLG00000002510 RLG00000002512
rosa_multiflora Rmu_sc0001725.1_g000022 Rmu_sc0002460.1_g000002 Rmu_sc0003132.1_g000001 Rmu_sc0007359.1_g000005 Rmu_sc0007359.1_g000009 Rmu_sc0018492.1_g000001 Rmu_sc0039353.1_g000001
rosa_roxburghii Rroxscaffold_3G00242520 Rroxscaffold_3G00242540 Rroxscaffold_3G00242560 Rroxscaffold_3G00242600
rosa_rugosa Rorug07G0165700 Rorug07G0165700 Rorug07G0165800 Rorug07G0165800 Rorug07G0166400 Rorug07G0166500 Rorug07G0166600 Rorug07G0166700 Rorug07G0166800 Rorug07G0166900 Rorug07G0167000 Rorug07G0167000 Rorug07G0167100
rosa_samantha Rh7AG305200 Rh7AG305300 Rh7AG305700 Rh7AG305900 Rh7AG327400 Rh7CG324200 Rh7CG324400 Rh7CG324900 Rh7CG344700 Rh7DG305400 Rh7DG305500 Rh7DG305800 Rh7DG323000
rosa_wichuraiana Rw0G004530 Rw3G011620 Rw7G025930 Rw7G025960 Rw7G025970 Rw7G025990 Rw7G027580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 368
AccB1I GGYRCC 1 cut(s) 821
AccII CGCG 1 cut(s) 776
AciI CCGC 3 cut(s) 175, 513, 1014
AcoI YGGCCR 1 cut(s) 1217
AcsI RAATTY 1 cut(s) 343
AcuI CTGAAG 1 cut(s) 1076
AcyI GRCGYC 1 cut(s) 978
AfaI GTAC 2 cut(s) 1073, 1126
AfiI CCNNNNNNNGG 1 cut(s) 1013
AgsI TTSAA 4 cut(s) 130, 578, 599, 848
AjuI GAANNNNNNNTTGG 2 cut(s) 1068, 1100
AluBI AGCT 8 cut(s) 7, 26, 182, 204, 307, 618, 830, 989
AluI AGCT 8 cut(s) 7, 26, 182, 204, 307, 618, 830, 989
Alw26I GTCTC 2 cut(s) 41, 320
AoxI GGCC 2 cut(s) 876, 1217
ApeKI GCWGC 3 cut(s) 618, 764, 1196
ApoI RAATTY 1 cut(s) 343
ArsI GACNNNNNNTTYG 2 cut(s) 1174, 1206
AspLEI GCGC 2 cut(s) 778, 1148
AspS9I GGNCC 2 cut(s) 398, 876
AvaII GGWCC 1 cut(s) 398
BaeI ACNNNNGTAYC 2 cut(s) 1055, 1088
BalI TGGCCA 1 cut(s) 1219
BanI GGYRCC 1 cut(s) 821
BauI CACGAG 1 cut(s) 1025
BbsI GAAGAC 2 cut(s) 133, 669
BbvI GCAGC 3 cut(s) 605, 751, 1183
BccI CCATC 2 cut(s) 678, 866
BcoDI GTCTC 2 cut(s) 41, 320
BfaI CTAG 1 cut(s) 1121
BfmI CTRYAG 1 cut(s) 1197
BfoI RGCGCY 1 cut(s) 1149
BisI GCNGC 4 cut(s) 175, 619, 765, 1197
BlpI GCTNAGC 1 cut(s) 178
BlsI GCNGC 4 cut(s) 176, 620, 766, 1198
Bme18I GGWCC 1 cut(s) 398
BmgT120I GGNCC 2 cut(s) 398, 876
BmiI GGNNCC 4 cut(s) 400, 809, 823, 877
BmsI GCATC 1 cut(s) 103
BpiI GAAGAC 2 cut(s) 133, 669
BpmI CTGGAG 1 cut(s) 735
Bpu1102I GCTNAGC 1 cut(s) 178
BsaHI GRCGYC 1 cut(s) 978
BsaI GGTCTC 1 cut(s) 320
BsaJI CCNNGG 2 cut(s) 642, 733
BsaXI ACNNNNNCTCC 6 cut(s) 38, 68, 280, 310, 814, 844
Bsc4I CCNNNNNNNGG 1 cut(s) 1013
Bse118I RCCGGY 1 cut(s) 226
Bse1I ACTGG 1 cut(s) 38
BseDI CCNNGG 2 cut(s) 642, 733
BseLI CCNNNNNNNGG 1 cut(s) 1013
BseMII CTCAG 2 cut(s) 405, 1074
BseNI ACTGG 1 cut(s) 38
BseRI GAGGAG 3 cut(s) 943, 958, 1047
BseXI GCAGC 3 cut(s) 605, 751, 1183
BseYI CCCAGC 2 cut(s) 373, 1148
Bsh1236I CGCG 1 cut(s) 776
BshFI GGCC 2 cut(s) 878, 1219
BshNI GGYRCC 1 cut(s) 821
BsiSI CCGG 1 cut(s) 227
BslFI GGGAC 3 cut(s) 364, 384, 1088
BslI CCNNNNNNNGG 1 cut(s) 1013
BsmAI GTCTC 2 cut(s) 41, 320
BsmFI GGGAC 3 cut(s) 364, 384, 1088
BsmI GAATGC 1 cut(s) 1166
BsnI GGCC 2 cut(s) 878, 1219
Bso31I GGTCTC 1 cut(s) 320
Bsp1720I GCTNAGC 1 cut(s) 178
BspACI CCGC 3 cut(s) 175, 513, 1014
BspANI GGCC 2 cut(s) 878, 1219
BspCNI CTCAG 2 cut(s) 406, 1073
BspFNI CGCG 1 cut(s) 776
BspHI TCATGA 2 cut(s) 109, 249
BspLI GGNNCC 4 cut(s) 400, 809, 823, 877
BspMAI CTGCAG 1 cut(s) 1201
BspT107I GGYRCC 1 cut(s) 821
BspTNI GGTCTC 1 cut(s) 320
BsrFI RCCGGY 1 cut(s) 226
BsrI ACTGG 1 cut(s) 38
BssAI RCCGGY 1 cut(s) 226
BssECI CCNNGG 2 cut(s) 642, 733
BssNI GRCGYC 1 cut(s) 978
BssSI CACGAG 1 cut(s) 1025
BssT1I CCWWGG 2 cut(s) 642, 733
Bst2BI CACGAG 1 cut(s) 1025
Bst4CI ACNGT 5 cut(s) 94, 453, 521, 826, 1213
BstACI GRCGYC 1 cut(s) 978
BstAPI GCANNNNNTGC 1 cut(s) 761
BstC8I GCNNGC 1 cut(s) 118
BstDEI CTNAG 4 cut(s) 178, 291, 414, 1060
BstFNI CGCG 1 cut(s) 776
BstH2I RGCGCY 1 cut(s) 1149
BstHHI GCGC 2 cut(s) 778, 1148
BstMAI GTCTC 2 cut(s) 41, 320
BstMWI GCNNNNNNNGC 4 cut(s) 761, 773, 884, 975
BstSFI CTRYAG 1 cut(s) 1197
BstUI CGCG 1 cut(s) 776
BstV1I GCAGC 3 cut(s) 605, 751, 1183
BstV2I GAAGAC 2 cut(s) 133, 669
BstXI CCANNNNNNTGG 1 cut(s) 677
BsuRI GGCC 2 cut(s) 878, 1219
BtsIMutI CAGTG 3 cut(s) 449, 481, 1209
Cac8I GCNNGC 1 cut(s) 118
CciI TCATGA 2 cut(s) 109, 249
CfoI GCGC 2 cut(s) 778, 1148
Cfr10I RCCGGY 1 cut(s) 226
Cfr13I GGNCC 2 cut(s) 398, 876
CseI GACGC 1 cut(s) 967
Csp6I GTAC 2 cut(s) 1072, 1125
CviAII CATG 7 cut(s) 110, 250, 457, 488, 529, 1114, 1231
CviQI GTAC 2 cut(s) 1072, 1125
DdeI CTNAG 4 cut(s) 178, 291, 414, 1060
EaeI YGGCCR 1 cut(s) 1217
Eco130I CCWWGG 2 cut(s) 642, 733
Eco31I GGTCTC 1 cut(s) 320
Eco47I GGWCC 1 cut(s) 398
Eco57I CTGAAG 1 cut(s) 1076
EcoO109I RGGNCCY 1 cut(s) 398
EcoT14I CCWWGG 2 cut(s) 642, 733
ErhI CCWWGG 2 cut(s) 642, 733
FaeI CATG 7 cut(s) 113, 253, 460, 491, 532, 1117, 1234
FalI AAGNNNNNCTT 2 cut(s) 717, 749
FaqI GGGAC 3 cut(s) 364, 384, 1088
FatI CATG 7 cut(s) 109, 249, 456, 487, 528, 1113, 1230
FauI CCCGC 1 cut(s) 506
FauNDI CATATG 1 cut(s) 196
Fnu4HI GCNGC 4 cut(s) 175, 619, 765, 1197
Fsp4HI GCNGC 4 cut(s) 175, 619, 765, 1197
FspBI CTAG 1 cut(s) 1121
GlaI GCGC 2 cut(s) 777, 1147
GluI GCNGC 4 cut(s) 175, 619, 765, 1197
GsaI CCCAGC 2 cut(s) 377, 1152
GsuI CTGGAG 1 cut(s) 735
HaeII RGCGCY 1 cut(s) 1149
HaeIII GGCC 2 cut(s) 878, 1219
HapII CCGG 1 cut(s) 227
HgaI GACGC 1 cut(s) 967
HhaI GCGC 2 cut(s) 778, 1148
Hin1I GRCGYC 1 cut(s) 978
Hin1II CATG 7 cut(s) 113, 253, 460, 491, 532, 1117, 1234
Hin6I GCGC 2 cut(s) 776, 1146
HinP1I GCGC 2 cut(s) 776, 1146
HincII GTYRAC 1 cut(s) 730
HindII GTYRAC 1 cut(s) 730
HindIII AAGCTT 2 cut(s) 5, 202
HinfI GANTC 6 cut(s) 410, 599, 844, 851, 898, 1117
HpaII CCGG 1 cut(s) 227
Hpy166II GTNNAC 2 cut(s) 524, 730
Hpy188I TCNGA 4 cut(s) 415, 937, 952, 1063
Hpy188III TCNNGA 5 cut(s) 86, 110, 250, 848, 1027
Hpy8I GTNNAC 2 cut(s) 524, 730
HpyAV CCTTC 2 cut(s) 168, 309
HpyCH4III ACNGT 5 cut(s) 94, 453, 521, 826, 1213
HpyCH4V TGCA 5 cut(s) 384, 621, 767, 969, 1199
HpyF10VI GCNNNNNNNGC 4 cut(s) 761, 773, 884, 975
HpyF3I CTNAG 4 cut(s) 178, 291, 414, 1060
Hsp92I GRCGYC 1 cut(s) 978
Hsp92II CATG 7 cut(s) 113, 253, 460, 491, 532, 1117, 1234
HspAI GCGC 2 cut(s) 776, 1146
LmnI GCTCC 3 cut(s) 754, 835, 1034
Lsp1109I GCAGC 3 cut(s) 605, 751, 1183
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 1121
MaeIII GTNAC 6 cut(s) 190, 261, 445, 992, 1054, 1240
MlsI TGGCCA 1 cut(s) 1219
MluCI AATT 6 cut(s) 343, 496, 633, 768, 1076, 1136
MluNI TGGCCA 1 cut(s) 1219
MlyI GAGTC 1 cut(s) 845
MmeI TCCRAC 5 cut(s) 49, 627, 652, 915, 1026
Mox20I TGGCCA 1 cut(s) 1219
MscI TGGCCA 1 cut(s) 1219
MseI TTAA 4 cut(s) 231, 803, 857, 918
MslI CAYNNNNRTG 1 cut(s) 248
Msp20I TGGCCA 1 cut(s) 1219
MspA1I CMGCKG 1 cut(s) 618
MspI CCGG 1 cut(s) 227
Mva1269I GAATGC 1 cut(s) 1166
MvnI CGCG 1 cut(s) 776
MwoI GCNNNNNNNGC 4 cut(s) 761, 773, 884, 975
NdeI CATATG 1 cut(s) 196
NlaIII CATG 7 cut(s) 113, 253, 460, 491, 532, 1117, 1234
NlaIV GGNNCC 4 cut(s) 400, 809, 823, 877
NmeAIII GCCGAG 1 cut(s) 246
NmuCI GTSAC 1 cut(s) 1240
PagI TCATGA 2 cut(s) 109, 249
PctI GAATGC 1 cut(s) 1166
PfeI GAWTC 5 cut(s) 410, 599, 844, 898, 1117
PflFI GACNNNGTC 1 cut(s) 92
PkrI GCNGC 4 cut(s) 176, 620, 766, 1198
PleI GAGTC 1 cut(s) 845
PpsI GAGTC 1 cut(s) 845
PpuMI RGGWCCY 1 cut(s) 398
PsiI TTATAA 1 cut(s) 368
Psp5II RGGWCCY 1 cut(s) 398
PspFI CCCAGC 2 cut(s) 373, 1148
PspN4I GGNNCC 4 cut(s) 400, 809, 823, 877
PspPI GGNCC 2 cut(s) 398, 876
PspPPI RGGWCCY 1 cut(s) 398
PstI CTGCAG 1 cut(s) 1201
PsyI GACNNNGTC 1 cut(s) 92
PvuII CAGCTG 1 cut(s) 618
RsaI GTAC 2 cut(s) 1073, 1126
RsaNI GTAC 2 cut(s) 1072, 1125
RseI CAYNNNNRTG 1 cut(s) 248
SaqAI TTAA 4 cut(s) 231, 803, 857, 918
SatI GCNGC 4 cut(s) 175, 619, 765, 1197
Sau96I GGNCC 2 cut(s) 398, 876
SchI GAGTC 1 cut(s) 845
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 1197
SinI GGWCC 1 cut(s) 398
SmiMI CAYNNNNRTG 1 cut(s) 248
Sse9I AATT 6 cut(s) 343, 496, 633, 768, 1076, 1136
SsiI CCGC 3 cut(s) 175, 513, 1014
SspI AATATT 1 cut(s) 744
SspMI CTAG 1 cut(s) 1121
StyI CCWWGG 2 cut(s) 642, 733
TaaI ACNGT 5 cut(s) 94, 453, 521, 826, 1213
TaqI TCGA 2 cut(s) 32, 87
TasI AATT 6 cut(s) 343, 496, 633, 768, 1076, 1136
TauI GCSGC 1 cut(s) 177
TfiI GAWTC 5 cut(s) 410, 599, 844, 898, 1117
Tru1I TTAA 4 cut(s) 231, 803, 857, 918
Tru9I TTAA 4 cut(s) 231, 803, 857, 918
TscAI CASTG 3 cut(s) 456, 481, 1216
TseFI GTSAC 1 cut(s) 1240
TseI GCWGC 3 cut(s) 618, 764, 1196
Tsp45I GTSAC 1 cut(s) 1240
TspDTI ATGAA 8 cut(s) 10, 17, 18, 213, 238, 971, 1130, 1219
TspGWI ACGGA 2 cut(s) 447, 827
TspRI CASTG 3 cut(s) 456, 481, 1216
Tth111I GACNNNGTC 1 cut(s) 92
VpaK11BI GGWCC 1 cut(s) 398
XapI RAATTY 1 cut(s) 343
XspI CTAG 1 cut(s) 1121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.