Rroxscaffold_3G00242540

Encoded by

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000423
Physical Location & Seq
Reverse (-)
34913872 .. 34918637
4766 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00242540.1

Sequence Viewer

Length: 1815 bp
ATGTTTGGATCACCCTCTTGGGCTGCTTCCTCTCCATCTCAGCTTCTGTGGTCACGGCTGGCTTTTGACATCCCGTCCAAACTTTTGCGGTGGCCGGATCGTGGTCTGTACCAAGGCATGCAGAGTTGGTGTCCTAAACCTGGGCTCGATGGTGCGGATTTTGGGCCACCGGAATTTGTTTGGCTCTCGAAGACTACTATGAAGGCTGCTGGATCTGTGCTACCAATATGCGAAGATGCAATCAGGGCCCAGTCGCAGCGATGCAGGTCTAATTGCAGCGATGAACATATGCGAAGGGCTGGGCTATGTGTGCCGAGCAATATGGCAGAGATGGATATCCAGTGGATATCGGTGATGCCGATGGCAGGGATTCTCTCATTGTGGTGGCTGTCTGATCGACCAAAGTTGATGGCGGCATCGTCGTCGACGTGGTGGCCAACAGCAAAGCTCAGTTTGGCCCTTAAGCTTGTTGGGCCTCTCTCTGGATTTGATGCCCTATTAGGTTTTGGACCTGGTTTGTTGGGGTCTAGAATCTTTGATGATCTTCTTGGGCTGCGGGCTGAACTTGGAGAAGACAGATTTTGGGCCTGGCTTTATTGGCTTTTCATCACCGCCTCGATTCCGGTCTTGAAAGTCCTCTTGATCACTGCACTTGGCTCCTATCTTGCAATGGAGCGCGTTAATATTCTGGGGGACGAAACCAAGAAGAACTTGAACACCGTTGTATTTTATGTATTCAGTCCAGCTCTGGTGGGAACGAACGTTGCCCAGACCATTACATATGACGGTATGATTAAACTGTGGTTTATGCCTGTGAACATCCTAATCACCTTCATTGTTGGTTCTGTACTTGGATGGATACTCATCCAATTAGCAAGACCACCTCCACATCTCCGAGGCCTCATTTTGGGATGCTGTGCGGCTGGAAATTTGGGGAACATGCTCCTCATTATAATCCCAGCAGTCTGTAAAGAAAAGGAAGCCCATTTGGAGCTCCTGATGTCTGTCACACTTATGGAATGGCTTATGCATCACTTTCAATGGCAAGGAGTACCCAAGACTCCCCGAGTCTTTGGAGGAACCCTCCGAATCAAACCAACATATTACCGTCGTTTGTCATGGCAGATAGAACCTCAGAGTAAATCCAAGAACTGCTTAGTGAGAATGTTTCAAATTCTTAATCTGAAAACGATATTTACCCCTTCAACTATTGGAGCAATTGTTGGGTTTGCAATCGGAGTCATCCCTCAGATTCGTAAACTAATGATAGGAGATGGTGCTCCTCTAAGGGTGATCCATGGCGCTACAAACTTGTTGGGGTTTGAGAGGGTCAGGAATACAGAAATCTATTGTTGTTGGGATCATAATCTATACACTCCCACCTGCAATGAACATAGGTGCCAGCCTCAGACACACTTTGCTAAATCATCTCCTTACAAGACTTATCCTTGTGTAAATGGCAGGAACGATCACCCAATTGTTCGGAGCAGGAGAGAACGAATGTTCAGTAATCCTGCTGTGGACTTATGTATTTGCATCAGTATCACTTACTTTATGAAGGGACTTGCATGTTCTAGTGATATCTTGAATGCCTATGTATATATGGGAGATGGTCCAGCTAGGTCCCAATCCAGACCTGCCACCGCAGCAAGTGAGCGTTGGTTCAAGGATCTTGAGCGCATTGCTGACAACCTCTTGGACCTCACAAAGATTGAGAGGCATGACTCCTCCATCCTCTTCAGGTTAAAAATGGGCCTCAACAGATATGGTCCAGCAGTCTCAGGGATAGGCCCGACATCTTCCGAATCTGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0005215 GO:0005575 GO:0006810 GO:0008150 GO:0016020 GO:0016021 GO:0022857 GO:0031224 GO:0044425 GO:0051179 GO:0051234 GO:0055085
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mem_trans

Protein Analysis

604

Amino Acids

67.51

Weight (kDa)

9.2

Isoelectric Point (pI)

46.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mem_trans PF03547 205 - 440 8.8e-38 Membrane transport protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000423)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G76520 AT1G76520 AT1G76530 AT1G76530 AT1G76530
fragaria_vesca FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26311 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26330 FvH4_5g26370 FvH4_5g26370
malus_domestica MD05G1225800.v1.1 MD06G1002600.v1.1 MD06G1002700.v1.1
prunus_persica Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004000_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004100_v2.0.a1 Prupe.5G004300_v2.0.a1
pyrus_communis pycom05g20790 pycom06g00270 pycom06g00280
rosa_chinensis RchiOBHm_Chr7g0217021 RchiOBHm_Chr7g0217081 RchiOBHm_Chr7g0217111 RchiOBHm_Chr7g0217141 RchiOBHm_Chr7g0217181 RchiOBHm_Chr7g0219341
rosa_laevigata RLG00000002504 RLG00000002506 RLG00000002510 RLG00000002512
rosa_multiflora Rmu_sc0001725.1_g000022 Rmu_sc0002460.1_g000002 Rmu_sc0003132.1_g000001 Rmu_sc0007359.1_g000005 Rmu_sc0007359.1_g000009 Rmu_sc0018492.1_g000001 Rmu_sc0039353.1_g000001
rosa_roxburghii Rroxscaffold_3G00242520 Rroxscaffold_3G00242540 Rroxscaffold_3G00242560 Rroxscaffold_3G00242600
rosa_rugosa Rorug07G0165700 Rorug07G0165700 Rorug07G0165800 Rorug07G0165800 Rorug07G0166400 Rorug07G0166500 Rorug07G0166600 Rorug07G0166700 Rorug07G0166800 Rorug07G0166900 Rorug07G0167000 Rorug07G0167000 Rorug07G0167100
rosa_samantha Rh7AG305200 Rh7AG305300 Rh7AG305700 Rh7AG305900 Rh7AG327400 Rh7CG324200 Rh7CG324400 Rh7CG324900 Rh7CG344700 Rh7DG305400 Rh7DG305500 Rh7DG305800 Rh7DG323000
rosa_wichuraiana Rw0G004530 Rw3G011620 Rw7G025930 Rw7G025960 Rw7G025970 Rw7G025990 Rw7G027580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
AarI CACCTGC 1 cut(s) 1391
Acc36I ACCTGC 3 cut(s) 255, 1391, 1645
AccB1I GGYRCC 1 cut(s) 1398
AccI GTMKAC 1 cut(s) 425
AccII CGCG 1 cut(s) 678
AciI CCGC 7 cut(s) 88, 155, 413, 556, 612, 920, 1644
AclI AACGTT 1 cut(s) 762
AclWI GGATC 6 cut(s) 16, 105, 220, 1288, 1368, 1677
AcoI YGGCCR 2 cut(s) 92, 434
AcsI RAATTY 3 cut(s) 173, 928, 1173
AcuI CTGAAG 1 cut(s) 1723
AfaI GTAC 3 cut(s) 110, 849, 1053
AfiI CCNNNNNNNGG 6 cut(s) 101, 140, 365, 482, 907, 1809
AflII CTTAAG 1 cut(s) 461
AgsI TTSAA 7 cut(s) 631, 715, 1040, 1172, 1206, 1588, 1666
AhdI GACNNNNNGTC 1 cut(s) 73
AjiI CACGTC 1 cut(s) 429
AjnI CCWGG 3 cut(s) 139, 511, 587
AluBI AGCT 6 cut(s) 43, 448, 466, 746, 994, 1619
AluI AGCT 6 cut(s) 43, 448, 466, 746, 994, 1619
Alw21I GWGCWC 2 cut(s) 996, 1282
Alw26I GTCTC 1 cut(s) 1783
AlwI GGATC 6 cut(s) 16, 105, 220, 1288, 1368, 1677
AlwNI CAGNNNCTG 1 cut(s) 46
Ama87I CYCGRG 1 cut(s) 1065
ApaI GGGCCC 1 cut(s) 250
ApeKI GCWGC 6 cut(s) 23, 206, 256, 276, 553, 1646
ApoI RAATTY 3 cut(s) 173, 928, 1173
AspLEI GCGC 3 cut(s) 678, 1304, 1680
AsuHPI GGTGA 6 cut(s) 3, 364, 601, 820, 1303, 1463
AvaI CYCGRG 1 cut(s) 1065
AvaII GGWCC 5 cut(s) 509, 1613, 1623, 1699, 1769
BaeGI GKGCMC 1 cut(s) 250
BalI TGGCCA 1 cut(s) 436
BanI GGYRCC 1 cut(s) 1398
BanII GRGCYC 3 cut(s) 147, 250, 996
BbsI GAAGAC 2 cut(s) 197, 579
Bbv12I GWGCWC 2 cut(s) 996, 1282
BbvI GCAGC 6 cut(s) 10, 193, 268, 288, 540, 1658
BccI CCATC 9 cut(s) 43, 143, 325, 355, 403, 849, 1268, 1604, 1739
BceAI ACGGC 1 cut(s) 71
BcgI CGANNNNNNTGC 2 cut(s) 405, 439
BciT130I CCWGG 3 cut(s) 141, 513, 589
BciVI GTATCC 1 cut(s) 852
BclI TGATCA 1 cut(s) 642
BcoDI GTCTC 1 cut(s) 1783
BfaI CTAG 3 cut(s) 528, 1575, 1620
BfoI RGCGCY 1 cut(s) 1305
BfrI CTTAAG 1 cut(s) 461
BfuAI ACCTGC 3 cut(s) 255, 1391, 1645
BfuI GTATCC 1 cut(s) 852
BisI GCNGC 8 cut(s) 24, 207, 257, 277, 414, 554, 921, 1647
BlsI GCNGC 8 cut(s) 25, 208, 258, 278, 415, 555, 922, 1648
Bme1390I CCNGG 3 cut(s) 141, 513, 589
Bme18I GGWCC 5 cut(s) 509, 1613, 1623, 1699, 1769
BmeRI GACNNNNNGTC 1 cut(s) 73
BmeT110I CYCGRG 1 cut(s) 1065
BmgBI CACGTC 1 cut(s) 429
BmiI GGNNCC 5 cut(s) 248, 658, 1081, 1400, 1625
BmrFI CCNGG 3 cut(s) 141, 513, 589
BmrI ACTGGG 1 cut(s) 244
BmsI GCATC 8 cut(s) 226, 251, 345, 425, 481, 902, 1039, 1545
BmuI ACTGGG 1 cut(s) 244
BpiI GAAGAC 2 cut(s) 197, 579
BplI GAGNNNNNCTC 2 cut(s) 1068, 1100
BpuEI CTTGAG 1 cut(s) 1694
BsaBI GATNNNNATC 3 cut(s) 335, 863, 1365
BsaJI CCNNGG 4 cut(s) 112, 140, 895, 1297
BsaWI WCCGGW 2 cut(s) 169, 622
BsaXI ACNNNNNCTCC 2 cut(s) 1206, 1236
Bsc4I CCNNNNNNNGG 6 cut(s) 101, 140, 365, 482, 907, 1809
Bse1I ACTGG 2 cut(s) 250, 340
Bse3DI GCAATG 3 cut(s) 675, 1393, 1680
Bse8I GATNNNNATC 3 cut(s) 335, 863, 1365
BseBI CCWGG 3 cut(s) 141, 513, 589
BseDI CCNNGG 4 cut(s) 112, 140, 895, 1297
BseGI GGATG 7 cut(s) 69, 819, 860, 864, 917, 1242, 1731
BseJI GATNNNNATC 3 cut(s) 335, 863, 1365
BseLI CCNNNNNNNGG 6 cut(s) 101, 140, 365, 482, 907, 1809
BseMI GCAATG 3 cut(s) 675, 1393, 1680
BseMII CTCAG 6 cut(s) 53, 463, 1148, 1262, 1421, 1794
BseNI ACTGG 2 cut(s) 250, 340
BseRI GAGGAG 3 cut(s) 935, 1272, 1717
BseSI GKGCMC 1 cut(s) 250
BseXI GCAGC 6 cut(s) 10, 193, 268, 288, 540, 1658
BseYI CCCAGC 2 cut(s) 299, 958
BsgI GTGCAG 1 cut(s) 633
Bsh1236I CGCG 1 cut(s) 678
BshNI GGYRCC 1 cut(s) 1398
BsiHKAI GWGCWC 2 cut(s) 996, 1282
BsiHKCI CYCGRG 1 cut(s) 1065
BsiSI CCGG 3 cut(s) 95, 170, 623
BslFI GGGAC 3 cut(s) 707, 1575, 1609
BslI CCNNNNNNNGG 6 cut(s) 101, 140, 365, 482, 907, 1809
BsmAI GTCTC 1 cut(s) 1783
BsmFI GGGAC 3 cut(s) 707, 1575, 1609
BsmI GAATGC 1 cut(s) 1594
BsoBI CYCGRG 1 cut(s) 1065
Bsp120I GGGCCC 1 cut(s) 246
Bsp1286I GDGCHC 4 cut(s) 147, 250, 996, 1282
Bsp19I CCATGG 1 cut(s) 1297
BspACI CCGC 7 cut(s) 88, 155, 413, 556, 612, 920, 1644
BspCNI CTCAG 6 cut(s) 52, 462, 1147, 1261, 1420, 1793
BspFNI CGCG 1 cut(s) 678
BspLI GGNNCC 5 cut(s) 248, 658, 1081, 1400, 1625
BspMI ACCTGC 3 cut(s) 255, 1391, 1645
BspPI GGATC 6 cut(s) 16, 105, 220, 1288, 1368, 1677
BspT107I GGYRCC 1 cut(s) 1398
BspTI CTTAAG 1 cut(s) 461
BsrDI GCAATG 3 cut(s) 675, 1393, 1680
BsrI ACTGG 2 cut(s) 250, 340
BssECI CCNNGG 4 cut(s) 112, 140, 895, 1297
BssT1I CCWWGG 2 cut(s) 112, 1297
Bst2UI CCWGG 3 cut(s) 141, 513, 589
Bst4CI ACNGT 4 cut(s) 721, 788, 801, 1109
Bst6I CTCTTC 1 cut(s) 1742
BstAFI CTTAAG 1 cut(s) 461
BstC8I GCNNGC 4 cut(s) 60, 119, 558, 1403
BstDEI CTNAG 8 cut(s) 39, 449, 1134, 1156, 1248, 1286, 1407, 1780
BstDSI CCRYGG 1 cut(s) 1297
BstF5I GGATG 7 cut(s) 69, 819, 860, 864, 917, 1242, 1731
BstFNI CGCG 1 cut(s) 678
BstH2I RGCGCY 1 cut(s) 1305
BstHHI GCGC 3 cut(s) 678, 1304, 1680
BstMAI GTCTC 1 cut(s) 1783
BstMWI GCNNNNNNNGC 5 cut(s) 245, 310, 472, 598, 1646
BstNI CCWGG 3 cut(s) 141, 513, 589
BstNSI RCATGY 3 cut(s) 121, 943, 1572
BstSCI CCNGG 3 cut(s) 139, 511, 587
BstSLI GKGCMC 1 cut(s) 250
BstUI CGCG 1 cut(s) 678
BstV1I GCAGC 6 cut(s) 10, 193, 268, 288, 540, 1658
BstV2I GAAGAC 2 cut(s) 197, 579
BstX2I RGATCY 2 cut(s) 212, 1669
BstYI RGATCY 2 cut(s) 212, 1669
BsuI GTATCC 1 cut(s) 852
BtgI CCRYGG 1 cut(s) 1297
BtgZI GCGATG 2 cut(s) 274, 294
BtrI CACGTC 1 cut(s) 429
BtsCI GGATG 7 cut(s) 69, 819, 860, 864, 917, 1242, 1731
BtsI GCAGTG 1 cut(s) 645
BtsIMutI CAGTG 2 cut(s) 347, 645
BveI ACCTGC 3 cut(s) 255, 1391, 1645
Cac8I GCNNGC 4 cut(s) 60, 119, 558, 1403
CaiI CAGNNNCTG 1 cut(s) 46
CfoI GCGC 3 cut(s) 678, 1304, 1680
CsiI ACCWGGT 1 cut(s) 511
Csp6I GTAC 3 cut(s) 109, 848, 1052
CviAII CATG 6 cut(s) 118, 940, 1119, 1298, 1569, 1721
CviQI GTAC 3 cut(s) 109, 848, 1052
DdeI CTNAG 8 cut(s) 39, 449, 1134, 1156, 1248, 1286, 1407, 1780
DriI GACNNNNNGTC 1 cut(s) 73
EaeI YGGCCR 2 cut(s) 92, 434
Eam1104I CTCTTC 1 cut(s) 1742
Eam1105I GACNNNNNGTC 1 cut(s) 73
EarI CTCTTC 1 cut(s) 1742
Ecl136II GAGCTC 1 cut(s) 994
Eco130I CCWWGG 2 cut(s) 112, 1297
Eco147I AGGCCT 1 cut(s) 900
Eco24I GRGCYC 3 cut(s) 147, 250, 996
Eco32I GATATC 3 cut(s) 337, 348, 1582
Eco47I GGWCC 5 cut(s) 509, 1613, 1623, 1699, 1769
Eco53kI GAGCTC 1 cut(s) 994
Eco57I CTGAAG 1 cut(s) 1723
Eco88I CYCGRG 1 cut(s) 1065
EcoICRI GAGCTC 1 cut(s) 994
EcoO109I RGGNCCY 2 cut(s) 246, 1623
EcoRII CCWGG 3 cut(s) 139, 511, 587
EcoRV GATATC 3 cut(s) 337, 348, 1582
EcoT14I CCWWGG 2 cut(s) 112, 1297
EcoT22I ATGCAT 1 cut(s) 1032
EcoT38I GRGCYC 3 cut(s) 147, 250, 996
ErhI CCWWGG 2 cut(s) 112, 1297
FaeI CATG 6 cut(s) 121, 943, 1122, 1301, 1572, 1724
FalI AAGNNNNNCTT 4 cut(s) 695, 727, 1139, 1171
FaqI GGGAC 3 cut(s) 707, 1575, 1609
FatI CATG 6 cut(s) 117, 939, 1118, 1297, 1568, 1720
FauI CCCGC 1 cut(s) 549
FauNDI CATATG 2 cut(s) 288, 781
FbaI TGATCA 1 cut(s) 642
FblI GTMKAC 1 cut(s) 425
Fnu4HI GCNGC 8 cut(s) 24, 207, 257, 277, 414, 554, 921, 1647
FokI GGATG 7 cut(s) 56, 806, 851, 867, 924, 1229, 1718
FriOI GRGCYC 3 cut(s) 147, 250, 996
Fsp4HI GCNGC 8 cut(s) 24, 207, 257, 277, 414, 554, 921, 1647
FspBI CTAG 3 cut(s) 528, 1575, 1620
GlaI GCGC 3 cut(s) 677, 1303, 1679
GluI GCNGC 8 cut(s) 24, 207, 257, 277, 414, 554, 921, 1647
GsaI CCCAGC 2 cut(s) 303, 962
HaeII RGCGCY 1 cut(s) 1305
HapII CCGG 3 cut(s) 95, 170, 623
HhaI GCGC 3 cut(s) 678, 1304, 1680
Hin1II CATG 6 cut(s) 121, 943, 1122, 1301, 1572, 1724
Hin6I GCGC 3 cut(s) 676, 1302, 1678
HinP1I GCGC 3 cut(s) 676, 1302, 1678
HincII GTYRAC 1 cut(s) 426
HindII GTYRAC 1 cut(s) 426
HindIII AAGCTT 1 cut(s) 464
HpaII CCGG 3 cut(s) 95, 170, 623
HphI GGTGA 6 cut(s) 3, 364, 601, 820, 1303, 1463
Hpy166II GTNNAC 4 cut(s) 426, 817, 1259, 1522
Hpy8I GTNNAC 4 cut(s) 426, 817, 1259, 1522
Hpy99I CGWCG 4 cut(s) 424, 427, 430, 1113
HpyAV CCTTC 5 cut(s) 196, 288, 841, 1212, 1552
HpyCH4III ACNGT 4 cut(s) 721, 788, 801, 1109
HpyCH4IV ACGT 2 cut(s) 428, 762
HpyF10VI GCNNNNNNNGC 5 cut(s) 245, 310, 472, 598, 1646
HpyF3I CTNAG 8 cut(s) 39, 449, 1134, 1156, 1248, 1286, 1407, 1780
HpySE526I ACGT 2 cut(s) 428, 762
Hsp92II CATG 6 cut(s) 121, 943, 1122, 1301, 1572, 1724
HspAI GCGC 3 cut(s) 676, 1302, 1678
Ksp22I TGATCA 1 cut(s) 642
LmnI GCTCC 8 cut(s) 662, 673, 948, 991, 999, 1214, 1285, 1485
Lsp1109I GCAGC 6 cut(s) 10, 193, 268, 288, 540, 1658
LweI GCATC 8 cut(s) 226, 251, 345, 425, 481, 902, 1039, 1545
MabI ACCWGGT 1 cut(s) 511
MaeI CTAG 3 cut(s) 528, 1575, 1620
MaeII ACGT 2 cut(s) 428, 762
MaeIII GTNAC 2 cut(s) 51, 1006
MboII GAAGA 7 cut(s) 202, 245, 536, 584, 718, 1729, 1791
MfeI CAATTG 2 cut(s) 1218, 1476
MflI RGATCY 2 cut(s) 212, 1669
MhlI GDGCHC 4 cut(s) 147, 250, 996, 1282
MlsI TGGCCA 1 cut(s) 436
MluCI AATT 7 cut(s) 173, 271, 869, 928, 1173, 1218, 1476
MluNI TGGCCA 1 cut(s) 436
MlyI GAGTC 4 cut(s) 1054, 1077, 1248, 1718
Mox20I TGGCCA 1 cut(s) 436
Mph1103I ATGCAT 1 cut(s) 1032
MscI TGGCCA 1 cut(s) 436
MseI TTAA 5 cut(s) 462, 681, 795, 1179, 1745
MslI CAYNNNNRTG 2 cut(s) 382, 1013
Msp20I TGGCCA 1 cut(s) 436
MspCI CTTAAG 1 cut(s) 461
MspI CCGG 3 cut(s) 95, 170, 623
MspR9I CCNGG 3 cut(s) 141, 513, 589
MunI CAATTG 2 cut(s) 1218, 1476
Mva1269I GAATGC 1 cut(s) 1594
MvaI CCWGG 3 cut(s) 141, 513, 589
MvnI CGCG 1 cut(s) 678
MwoI GCNNNNNNNGC 5 cut(s) 245, 310, 472, 598, 1646
NcoI CCATGG 1 cut(s) 1297
NdeI CATATG 2 cut(s) 288, 781
NlaIII CATG 6 cut(s) 121, 943, 1122, 1301, 1572, 1724
NlaIV GGNNCC 5 cut(s) 248, 658, 1081, 1400, 1625
NmeAIII GCCGAG 1 cut(s) 339
NmuCI GTSAC 2 cut(s) 51, 1006
NsiI ATGCAT 1 cut(s) 1032
NspI RCATGY 3 cut(s) 121, 943, 1572
PaeI GCATGC 1 cut(s) 121
PaqCI CACCTGC 1 cut(s) 1391
PceI AGGCCT 1 cut(s) 900
PcsI WCGNNNNNNNCGW 2 cut(s) 356, 425
PctI GAATGC 1 cut(s) 1594
PfeI GAWTC 6 cut(s) 370, 531, 619, 1089, 1252, 1805
PkrI GCNGC 8 cut(s) 25, 208, 258, 278, 415, 555, 922, 1648
PleI GAGTC 4 cut(s) 1054, 1076, 1247, 1718
PpsI GAGTC 4 cut(s) 1054, 1076, 1247, 1718
PpuMI RGGWCCY 1 cut(s) 1623
PsiI TTATAA 1 cut(s) 953
Psp124BI GAGCTC 1 cut(s) 996
Psp1406I AACGTT 1 cut(s) 762
Psp5II RGGWCCY 1 cut(s) 1623
Psp6I CCWGG 3 cut(s) 139, 511, 587
PspFI CCCAGC 2 cut(s) 299, 958
PspGI CCWGG 3 cut(s) 139, 511, 587
PspN4I GGNNCC 5 cut(s) 248, 658, 1081, 1400, 1625
PspOMI GGGCCC 1 cut(s) 246
PspPPI RGGWCCY 1 cut(s) 1623
PstNI CAGNNNCTG 1 cut(s) 46
PsuI RGATCY 2 cut(s) 212, 1669
RsaI GTAC 3 cut(s) 110, 849, 1053
RsaNI GTAC 3 cut(s) 109, 848, 1052
RseI CAYNNNNRTG 2 cut(s) 382, 1013
SacI GAGCTC 1 cut(s) 996
SalI GTCGAC 1 cut(s) 424
SaqAI TTAA 5 cut(s) 462, 681, 795, 1179, 1745
SatI GCNGC 8 cut(s) 24, 207, 257, 277, 414, 554, 921, 1647
SchI GAGTC 4 cut(s) 1054, 1077, 1248, 1718
ScrFI CCNGG 3 cut(s) 141, 513, 589
SduI GDGCHC 4 cut(s) 147, 250, 996, 1282
SexAI ACCWGGT 1 cut(s) 511
SfaNI GCATC 8 cut(s) 226, 251, 345, 425, 481, 902, 1039, 1545
SgrDI CGTCGACG 1 cut(s) 424
SinI GGWCC 5 cut(s) 509, 1613, 1623, 1699, 1769
SmiMI CAYNNNNRTG 2 cut(s) 382, 1013
SmlI CTYRAG 2 cut(s) 461, 1673
SmoI CTYRAG 2 cut(s) 461, 1673
SphI GCATGC 1 cut(s) 121
Sse9I AATT 7 cut(s) 173, 271, 869, 928, 1173, 1218, 1476
SseBI AGGCCT 1 cut(s) 900
SsiI CCGC 7 cut(s) 88, 155, 413, 556, 612, 920, 1644
SspI AATATT 1 cut(s) 685
SspMI CTAG 3 cut(s) 528, 1575, 1620
SstI GAGCTC 1 cut(s) 996
StuI AGGCCT 1 cut(s) 900
StyD4I CCNGG 3 cut(s) 139, 511, 587
StyI CCWWGG 2 cut(s) 112, 1297
TaaI ACNGT 4 cut(s) 721, 788, 801, 1109
TaiI ACGT 2 cut(s) 431, 765
TaqI TCGA 5 cut(s) 147, 188, 397, 425, 617
TasI AATT 7 cut(s) 173, 271, 869, 928, 1173, 1218, 1476
TatI WGTACW 1 cut(s) 847
TauI GCSGC 2 cut(s) 416, 923
TfiI GAWTC 6 cut(s) 370, 531, 619, 1089, 1252, 1805
Tru1I TTAA 5 cut(s) 462, 681, 795, 1179, 1745
Tru9I TTAA 5 cut(s) 462, 681, 795, 1179, 1745
TscAI CASTG 2 cut(s) 347, 652
TseFI GTSAC 2 cut(s) 51, 1006
TseI GCWGC 6 cut(s) 23, 206, 256, 276, 553, 1646
Tsp45I GTSAC 2 cut(s) 51, 1006
TspDTI ATGAA 6 cut(s) 215, 297, 595, 823, 1404, 1571
TspRI CASTG 2 cut(s) 347, 652
Vha464I CTTAAG 1 cut(s) 461
VpaK11BI GGWCC 5 cut(s) 509, 1613, 1623, 1699, 1769
XapI RAATTY 3 cut(s) 173, 928, 1173
XbaI TCTAGA 1 cut(s) 527
XceI RCATGY 3 cut(s) 121, 943, 1572
XmiI GTMKAC 1 cut(s) 425
XspI CTAG 3 cut(s) 528, 1575, 1620
Zsp2I ATGCAT 1 cut(s) 1032
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.