Isocitrate dehydrogenase NAD regulatory subunit 3
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Iso_dh | PF00180 | 40 - 363 | 2.6e-80 | Isocitrate/isopropylmalate dehydrogenase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 702 |
| AccII | CGCG | 2 cut(s) | 197, 412 |
| AciI | CCGC | 3 cut(s) | 167, 626, 794 |
| AclWI | GGATC | 2 cut(s) | 6, 69 |
| AcuI | CTGAAG | 2 cut(s) | 270, 474 |
| AfaI | GTAC | 2 cut(s) | 464, 1063 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 98, 104, 140, 317 |
| AflII | CTTAAG | 1 cut(s) | 509 |
| AgeI | ACCGGT | 1 cut(s) | 161 |
| AgsI | TTSAA | 3 cut(s) | 337, 644, 998 |
| AjnI | CCWGG | 3 cut(s) | 397, 490, 826 |
| AleI | CACNNNNGTG | 1 cut(s) | 818 |
| AluBI | AGCT | 5 cut(s) | 110, 608, 622, 721, 1097 |
| AluI | AGCT | 5 cut(s) | 110, 608, 622, 721, 1097 |
| Alw21I | GWGCWC | 1 cut(s) | 112 |
| Alw26I | GTCTC | 2 cut(s) | 293, 476 |
| AlwI | GGATC | 2 cut(s) | 6, 69 |
| Ama87I | CYCGRG | 1 cut(s) | 473 |
| ApeKI | GCWGC | 2 cut(s) | 718, 1094 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 748, 780 |
| AsiGI | ACCGGT | 1 cut(s) | 161 |
| AspLEI | GCGC | 1 cut(s) | 199 |
| AspS9I | GGNCC | 1 cut(s) | 149 |
| AsuC2I | CCSGG | 2 cut(s) | 99, 135 |
| AsuHPI | GGTGA | 4 cut(s) | 73, 169, 526, 766 |
| AvaI | CYCGRG | 1 cut(s) | 473 |
| AvaII | GGWCC | 1 cut(s) | 149 |
| BanII | GRGCYC | 2 cut(s) | 112, 636 |
| Bbv12I | GWGCWC | 1 cut(s) | 112 |
| BbvI | GCAGC | 1 cut(s) | 730 |
| BccI | CCATC | 4 cut(s) | 86, 98, 623, 895 |
| BceAI | ACGGC | 1 cut(s) | 807 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 851, 885 |
| BciT130I | CCWGG | 3 cut(s) | 399, 492, 828 |
| BcnI | CCSGG | 2 cut(s) | 99, 135 |
| BcoDI | GTCTC | 2 cut(s) | 293, 476 |
| BfaI | CTAG | 2 cut(s) | 93, 227 |
| BfrI | CTTAAG | 1 cut(s) | 509 |
| BglII | AGATCT | 1 cut(s) | 1045 |
| BisI | GCNGC | 3 cut(s) | 719, 795, 1095 |
| BlsI | GCNGC | 3 cut(s) | 720, 796, 1096 |
| BmcAI | AGTACT | 1 cut(s) | 464 |
| Bme1390I | CCNGG | 5 cut(s) | 99, 135, 399, 492, 828 |
| Bme18I | GGWCC | 1 cut(s) | 149 |
| BmeT110I | CYCGRG | 1 cut(s) | 473 |
| BmgT120I | GGNCC | 1 cut(s) | 149 |
| BmrFI | CCNGG | 5 cut(s) | 99, 135, 399, 492, 828 |
| BmsI | GCATC | 6 cut(s) | 180, 396, 813, 881, 945, 1072 |
| BpmI | CTGGAG | 1 cut(s) | 837 |
| Bpu10I | CCTNAGC | 1 cut(s) | 735 |
| BpuMI | CCSGG | 2 cut(s) | 99, 135 |
| BsaI | GGTCTC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 1 cut(s) | 397 |
| BsaWI | WCCGGW | 3 cut(s) | 161, 925, 969 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 822, 852 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 98, 104, 140, 317 |
| Bse118I | RCCGGY | 2 cut(s) | 161, 806 |
| Bse1I | ACTGG | 2 cut(s) | 200, 820 |
| BseBI | CCWGG | 3 cut(s) | 399, 492, 828 |
| BseDI | CCNNGG | 1 cut(s) | 397 |
| BseGI | GGATG | 1 cut(s) | 634 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 98, 104, 140, 317 |
| BseMII | CTCAG | 3 cut(s) | 480, 525, 726 |
| BseNI | ACTGG | 2 cut(s) | 200, 820 |
| BseRI | GAGGAG | 1 cut(s) | 1068 |
| BseXI | GCAGC | 1 cut(s) | 730 |
| BsgI | GTGCAG | 1 cut(s) | 864 |
| Bsh1236I | CGCG | 2 cut(s) | 197, 412 |
| BshTI | ACCGGT | 1 cut(s) | 161 |
| BsiHKAI | GWGCWC | 1 cut(s) | 112 |
| BsiHKCI | CYCGRG | 1 cut(s) | 473 |
| BsiSI | CCGG | 6 cut(s) | 99, 135, 162, 807, 926, 970 |
| BslFI | GGGAC | 3 cut(s) | 55, 230, 380 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 98, 104, 140, 317 |
| BsmAI | GTCTC | 2 cut(s) | 293, 476 |
| BsmFI | GGGAC | 3 cut(s) | 55, 230, 380 |
| Bso31I | GGTCTC | 1 cut(s) | 476 |
| BsoBI | CYCGRG | 1 cut(s) | 473 |
| Bsp1286I | GDGCHC | 2 cut(s) | 112, 636 |
| Bsp143I | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| BspACI | CCGC | 3 cut(s) | 167, 626, 794 |
| BspCNI | CTCAG | 3 cut(s) | 479, 526, 727 |
| BspFNI | CGCG | 2 cut(s) | 197, 412 |
| BspPI | GGATC | 2 cut(s) | 6, 69 |
| BspQI | GCTCTTC | 1 cut(s) | 641 |
| BspTI | CTTAAG | 1 cut(s) | 509 |
| BspTNI | GGTCTC | 1 cut(s) | 476 |
| BsrFI | RCCGGY | 2 cut(s) | 161, 806 |
| BsrI | ACTGG | 2 cut(s) | 200, 820 |
| BssAI | RCCGGY | 2 cut(s) | 161, 806 |
| BssECI | CCNNGG | 1 cut(s) | 397 |
| BssMI | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| Bst2UI | CCWGG | 3 cut(s) | 399, 492, 828 |
| Bst4CI | ACNGT | 2 cut(s) | 69, 121 |
| Bst6I | CTCTTC | 2 cut(s) | 266, 641 |
| BstAFI | CTTAAG | 1 cut(s) | 509 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 851 |
| BstC8I | GCNNGC | 2 cut(s) | 195, 624 |
| BstDEI | CTNAG | 4 cut(s) | 466, 534, 735, 959 |
| BstEII | GGTNACC | 2 cut(s) | 157, 773 |
| BstF5I | GGATG | 1 cut(s) | 634 |
| BstFNI | CGCG | 2 cut(s) | 197, 412 |
| BstHHI | GCGC | 1 cut(s) | 199 |
| BstKTI | GATC | 5 cut(s) | 14, 77, 261, 991, 1048 |
| BstMAI | GTCTC | 2 cut(s) | 293, 476 |
| BstMBI | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 194, 551, 791, 803, 851, 1091 |
| BstNI | CCWGG | 3 cut(s) | 399, 492, 828 |
| BstNSI | RCATGY | 2 cut(s) | 91, 854 |
| BstPI | GGTNACC | 2 cut(s) | 157, 773 |
| BstSCI | CCNGG | 5 cut(s) | 97, 133, 397, 490, 826 |
| BstUI | CGCG | 2 cut(s) | 197, 412 |
| BstV1I | GCAGC | 1 cut(s) | 730 |
| BstX2I | RGATCY | 2 cut(s) | 11, 1045 |
| BstYI | RGATCY | 2 cut(s) | 11, 1045 |
| BtgZI | GCGATG | 1 cut(s) | 203 |
| BtsCI | GGATG | 1 cut(s) | 634 |
| BtsI | GCAGTG | 1 cut(s) | 1011 |
| BtsIMutI | CAGTG | 5 cut(s) | 65, 207, 450, 813, 1011 |
| Cac8I | GCNNGC | 2 cut(s) | 195, 624 |
| CfoI | GCGC | 1 cut(s) | 199 |
| Cfr10I | RCCGGY | 2 cut(s) | 161, 806 |
| Cfr13I | GGNCC | 1 cut(s) | 149 |
| CseI | GACGC | 1 cut(s) | 418 |
| Csp6I | GTAC | 2 cut(s) | 463, 1062 |
| CspAI | ACCGGT | 1 cut(s) | 161 |
| CviAII | CATG | 6 cut(s) | 88, 181, 235, 479, 751, 851 |
| CviQI | GTAC | 2 cut(s) | 463, 1062 |
| DdeI | CTNAG | 4 cut(s) | 466, 534, 735, 959 |
| DpnI | GATC | 5 cut(s) | 13, 76, 260, 990, 1047 |
| DpnII | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| Eam1104I | CTCTTC | 2 cut(s) | 266, 641 |
| EarI | CTCTTC | 2 cut(s) | 266, 641 |
| Ecl136II | GAGCTC | 1 cut(s) | 110 |
| Eco24I | GRGCYC | 2 cut(s) | 112, 636 |
| Eco31I | GGTCTC | 1 cut(s) | 476 |
| Eco32I | GATATC | 2 cut(s) | 364, 430 |
| Eco47I | GGWCC | 1 cut(s) | 149 |
| Eco53kI | GAGCTC | 1 cut(s) | 110 |
| Eco57I | CTGAAG | 2 cut(s) | 270, 474 |
| Eco88I | CYCGRG | 1 cut(s) | 473 |
| Eco91I | GGTNACC | 2 cut(s) | 157, 773 |
| EcoICRI | GAGCTC | 1 cut(s) | 110 |
| EcoO65I | GGTNACC | 2 cut(s) | 157, 773 |
| EcoRII | CCWGG | 3 cut(s) | 397, 490, 826 |
| EcoRV | GATATC | 2 cut(s) | 364, 430 |
| EcoT22I | ATGCAT | 1 cut(s) | 556 |
| EcoT38I | GRGCYC | 2 cut(s) | 112, 636 |
| FaeI | CATG | 6 cut(s) | 91, 184, 238, 482, 754, 854 |
| FaqI | GGGAC | 3 cut(s) | 55, 230, 380 |
| FatI | CATG | 6 cut(s) | 87, 180, 234, 478, 750, 850 |
| FblI | GTMKAC | 1 cut(s) | 702 |
| Fnu4HI | GCNGC | 3 cut(s) | 719, 795, 1095 |
| FokI | GGATG | 1 cut(s) | 641 |
| FriOI | GRGCYC | 2 cut(s) | 112, 636 |
| Fsp4HI | GCNGC | 3 cut(s) | 719, 795, 1095 |
| FspBI | CTAG | 2 cut(s) | 93, 227 |
| GlaI | GCGC | 1 cut(s) | 198 |
| GluI | GCNGC | 3 cut(s) | 719, 795, 1095 |
| GsuI | CTGGAG | 1 cut(s) | 837 |
| HapII | CCGG | 6 cut(s) | 99, 135, 162, 807, 926, 970 |
| HgaI | GACGC | 1 cut(s) | 418 |
| HhaI | GCGC | 1 cut(s) | 199 |
| Hin1II | CATG | 6 cut(s) | 91, 184, 238, 482, 754, 854 |
| Hin6I | GCGC | 1 cut(s) | 197 |
| HinP1I | GCGC | 1 cut(s) | 197 |
| HindIII | AAGCTT | 1 cut(s) | 620 |
| HinfI | GANTC | 6 cut(s) | 43, 144, 263, 307, 644, 922 |
| HpaII | CCGG | 6 cut(s) | 99, 135, 162, 807, 926, 970 |
| HphI | GGTGA | 4 cut(s) | 73, 169, 526, 766 |
| Hpy166II | GTNNAC | 1 cut(s) | 703 |
| Hpy188I | TCNGA | 2 cut(s) | 149, 535 |
| Hpy188III | TCNNGA | 5 cut(s) | 72, 211, 473, 502, 1100 |
| Hpy8I | GTNNAC | 1 cut(s) | 703 |
| Hpy99I | CGWCG | 2 cut(s) | 143, 949 |
| HpyAV | CCTTC | 4 cut(s) | 44, 60, 449, 1019 |
| HpyCH4III | ACNGT | 2 cut(s) | 69, 121 |
| HpyCH4V | TGCA | 8 cut(s) | 193, 205, 343, 387, 554, 718, 845, 872 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 194, 551, 791, 803, 851, 1091 |
| HpyF3I | CTNAG | 4 cut(s) | 466, 534, 735, 959 |
| Hsp92II | CATG | 6 cut(s) | 91, 184, 238, 482, 754, 854 |
| HspAI | GCGC | 1 cut(s) | 197 |
| Kzo9I | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| LguI | GCTCTTC | 1 cut(s) | 641 |
| LmnI | GCTCC | 2 cut(s) | 107, 115 |
| Lsp1109I | GCAGC | 1 cut(s) | 730 |
| LweI | GCATC | 6 cut(s) | 180, 396, 813, 881, 945, 1072 |
| MaeI | CTAG | 2 cut(s) | 93, 227 |
| MaeIII | GTNAC | 6 cut(s) | 121, 157, 406, 589, 754, 773 |
| MalI | GATC | 5 cut(s) | 13, 76, 260, 990, 1047 |
| MboI | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| MboII | GAAGA | 7 cut(s) | 21, 263, 283, 358, 595, 628, 925 |
| MfeI | CAATTG | 3 cut(s) | 344, 382, 706 |
| MflI | RGATCY | 2 cut(s) | 11, 1045 |
| MhlI | GDGCHC | 2 cut(s) | 112, 636 |
| MluCI | AATT | 6 cut(s) | 129, 344, 382, 706, 740, 763 |
| MlyI | GAGTC | 2 cut(s) | 272, 301 |
| MnlI | CCTC | 7 cut(s) | 57, 214, 342, 475, 649, 824, 1046 |
| Mph1103I | ATGCAT | 1 cut(s) | 556 |
| MseI | TTAA | 3 cut(s) | 27, 510, 1020 |
| MslI | CAYNNNNRTG | 3 cut(s) | 86, 420, 818 |
| MspCI | CTTAAG | 1 cut(s) | 509 |
| MspI | CCGG | 6 cut(s) | 99, 135, 162, 807, 926, 970 |
| MspR9I | CCNGG | 5 cut(s) | 99, 135, 399, 492, 828 |
| MunI | CAATTG | 3 cut(s) | 344, 382, 706 |
| MvaI | CCWGG | 3 cut(s) | 399, 492, 828 |
| MvnI | CGCG | 2 cut(s) | 197, 412 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 194, 551, 791, 803, 851, 1091 |
| NciI | CCSGG | 2 cut(s) | 99, 135 |
| NdeII | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| NlaIII | CATG | 6 cut(s) | 91, 184, 238, 482, 754, 854 |
| NmuCI | GTSAC | 4 cut(s) | 157, 406, 589, 754 |
| NsiI | ATGCAT | 1 cut(s) | 556 |
| NspI | RCATGY | 2 cut(s) | 91, 854 |
| OliI | CACNNNNGTG | 1 cut(s) | 818 |
| PaeR7I | CTCGAG | 1 cut(s) | 473 |
| PciSI | GCTCTTC | 1 cut(s) | 641 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 216 |
| PfeI | GAWTC | 4 cut(s) | 43, 144, 644, 922 |
| PinAI | ACCGGT | 1 cut(s) | 161 |
| PkrI | GCNGC | 3 cut(s) | 720, 796, 1096 |
| PleI | GAGTC | 2 cut(s) | 271, 301 |
| PpsI | GAGTC | 2 cut(s) | 271, 301 |
| Psp124BI | GAGCTC | 1 cut(s) | 112 |
| Psp6I | CCWGG | 3 cut(s) | 397, 490, 826 |
| PspEI | GGTNACC | 2 cut(s) | 157, 773 |
| PspGI | CCWGG | 3 cut(s) | 397, 490, 826 |
| PspPI | GGNCC | 1 cut(s) | 149 |
| PsuI | RGATCY | 2 cut(s) | 11, 1045 |
| RsaI | GTAC | 2 cut(s) | 464, 1063 |
| RsaNI | GTAC | 2 cut(s) | 463, 1062 |
| RseI | CAYNNNNRTG | 3 cut(s) | 86, 420, 818 |
| SacI | GAGCTC | 1 cut(s) | 112 |
| SapI | GCTCTTC | 1 cut(s) | 641 |
| SaqAI | TTAA | 3 cut(s) | 27, 510, 1020 |
| SatI | GCNGC | 3 cut(s) | 719, 795, 1095 |
| Sau3AI | GATC | 5 cut(s) | 11, 74, 258, 988, 1045 |
| Sau96I | GGNCC | 1 cut(s) | 149 |
| ScaI | AGTACT | 1 cut(s) | 464 |
| SchI | GAGTC | 2 cut(s) | 272, 301 |
| ScrFI | CCNGG | 5 cut(s) | 99, 135, 399, 492, 828 |
| SduI | GDGCHC | 2 cut(s) | 112, 636 |
| SfaNI | GCATC | 6 cut(s) | 180, 396, 813, 881, 945, 1072 |
| Sfr274I | CTCGAG | 1 cut(s) | 473 |
| SinI | GGWCC | 1 cut(s) | 149 |
| SlaI | CTCGAG | 1 cut(s) | 473 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 86, 420, 818 |
| SmlI | CTYRAG | 3 cut(s) | 473, 509, 1100 |
| SmoI | CTYRAG | 3 cut(s) | 473, 509, 1100 |
| Sse9I | AATT | 6 cut(s) | 129, 344, 382, 706, 740, 763 |
| SsiI | CCGC | 3 cut(s) | 167, 626, 794 |
| SspMI | CTAG | 2 cut(s) | 93, 227 |
| SstI | GAGCTC | 1 cut(s) | 112 |
| StyD4I | CCNGG | 5 cut(s) | 97, 133, 397, 490, 826 |
| TaaI | ACNGT | 2 cut(s) | 69, 121 |
| TaqI | TCGA | 7 cut(s) | 20, 210, 261, 360, 474, 501, 861 |
| TasI | AATT | 6 cut(s) | 129, 344, 382, 706, 740, 763 |
| TatI | WGTACW | 1 cut(s) | 462 |
| TauI | GCSGC | 1 cut(s) | 797 |
| TfiI | GAWTC | 4 cut(s) | 43, 144, 644, 922 |
| Tru1I | TTAA | 3 cut(s) | 27, 510, 1020 |
| Tru9I | TTAA | 3 cut(s) | 27, 510, 1020 |
| TscAI | CASTG | 5 cut(s) | 72, 207, 457, 820, 1011 |
| TseFI | GTSAC | 4 cut(s) | 157, 406, 589, 754 |
| TseI | GCWGC | 2 cut(s) | 718, 1094 |
| Tsp45I | GTSAC | 4 cut(s) | 157, 406, 589, 754 |
| TspDTI | ATGAA | 3 cut(s) | 590, 632, 705 |
| TspGWI | ACGGA | 2 cut(s) | 4, 156 |
| TspRI | CASTG | 5 cut(s) | 72, 207, 457, 820, 1011 |
| Vha464I | CTTAAG | 1 cut(s) | 509 |
| VpaK11BI | GGWCC | 1 cut(s) | 149 |
| XceI | RCATGY | 2 cut(s) | 91, 854 |
| XhoI | CTCGAG | 1 cut(s) | 473 |
| XmiI | GTMKAC | 1 cut(s) | 702 |
| XspI | CTAG | 2 cut(s) | 93, 227 |
| ZrmI | AGTACT | 1 cut(s) | 464 |
| Zsp2I | ATGCAT | 1 cut(s) | 556 |