Isocitrate dehydrogenase NAD regulatory subunit 1
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF8003 | PF26010 | 798 - 872 | 2.2e-34 | Domain of unknown function (DUF8003) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1724, 3822 |
| AarI | CACCTGC | 2 cut(s) | 968, 1988 |
| Acc36I | ACCTGC | 3 cut(s) | 968, 1988, 4028 |
| AccB1I | GGYRCC | 2 cut(s) | 484, 2453 |
| AccI | GTMKAC | 4 cut(s) | 2637, 3024, 3079, 3976 |
| AccII | CGCG | 1 cut(s) | 146 |
| AcoI | YGGCCR | 1 cut(s) | 3838 |
| AcsI | RAATTY | 9 cut(s) | 98, 894, 1167, 1321, 1432, 1462, 2095, 3110, 4269 |
| AcuI | CTGAAG | 4 cut(s) | 922, 1665, 1667, 3320 |
| AcyI | GRCGYC | 1 cut(s) | 485 |
| AdeI | CACNNNGTG | 2 cut(s) | 1753, 2192 |
| AfaI | GTAC | 4 cut(s) | 667, 1770, 4215, 4289 |
| AfeI | AGCGCT | 2 cut(s) | 2033, 4006 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 340, 341, 1153, 2144, 2240, 2281, 3506, 3991 |
| AflII | CTTAAG | 1 cut(s) | 3937 |
| AflIII | ACRYGT | 1 cut(s) | 3523 |
| AgeI | ACCGGT | 1 cut(s) | 2290 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 2568, 3462 |
| AhlI | ACTAGT | 2 cut(s) | 500, 668 |
| AjnI | CCWGG | 9 cut(s) | 313, 511, 1474, 1500, 1537, 2137, 3536, 4160, 4263 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2433, 2465 |
| Alw21I | GWGCWC | 6 cut(s) | 249, 350, 1288, 1611, 2709, 3166 |
| Alw26I | GTCTC | 7 cut(s) | 132, 215, 713, 2555, 2687, 3697, 3879 |
| Alw44I | GTGCAC | 1 cut(s) | 3162 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 983, 3557 |
| Aor51HI | AGCGCT | 2 cut(s) | 2033, 4006 |
| AoxI | GGCC | 6 cut(s) | 1472, 1556, 2403, 2882, 3253, 3838 |
| ApaLI | GTGCAC | 1 cut(s) | 3162 |
| ApeKI | GCWGC | 8 cut(s) | 330, 804, 983, 1569, 1854, 2753, 2996, 3188 |
| ApoI | RAATTY | 9 cut(s) | 98, 894, 1167, 1321, 1432, 1462, 2095, 3110, 4269 |
| AseI | ATTAAT | 2 cut(s) | 2337, 2985 |
| AsiGI | ACCGGT | 1 cut(s) | 2290 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 895, 1248, 1632, 3114 |
| AspA2I | CCTAGG | 1 cut(s) | 3229 |
| AspLEI | GCGC | 5 cut(s) | 148, 487, 2034, 3429, 4007 |
| AspS9I | GGNCC | 8 cut(s) | 1472, 1535, 1556, 2118, 2135, 2403, 2651, 2882 |
| AsuC2I | CCSGG | 4 cut(s) | 409, 472, 587, 3992 |
| AsuHPI | GGTGA | 6 cut(s) | 43, 52, 530, 779, 1765, 2204 |
| AsuII | TTCGAA | 1 cut(s) | 1291 |
| AvaII | GGWCC | 4 cut(s) | 1535, 2118, 2135, 2651 |
| AvrII | CCTAGG | 1 cut(s) | 3229 |
| BaeGI | GKGCMC | 1 cut(s) | 3166 |
| BalI | TGGCCA | 1 cut(s) | 3840 |
| BamHI | GGATCC | 2 cut(s) | 607, 2147 |
| BanI | GGYRCC | 2 cut(s) | 484, 2453 |
| BanII | GRGCYC | 5 cut(s) | 249, 1611, 2063, 2488, 2777 |
| BbsI | GAAGAC | 2 cut(s) | 1196, 3260 |
| Bbv12I | GWGCWC | 6 cut(s) | 249, 350, 1288, 1611, 2709, 3166 |
| BbvCI | CCTCAGC | 1 cut(s) | 180 |
| BbvI | GCAGC | 8 cut(s) | 317, 816, 970, 1581, 1866, 2740, 2983, 3175 |
| BceAI | ACGGC | 1 cut(s) | 1131 |
| BciT130I | CCWGG | 9 cut(s) | 315, 513, 1476, 1502, 1539, 2139, 3538, 4162, 4265 |
| BclI | TGATCA | 3 cut(s) | 459, 3130, 4080 |
| BcnI | CCSGG | 4 cut(s) | 409, 472, 587, 3992 |
| BcoDI | GTCTC | 7 cut(s) | 132, 215, 713, 2555, 2687, 3697, 3879 |
| BcuI | ACTAGT | 2 cut(s) | 500, 668 |
| BfmI | CTRYAG | 7 cut(s) | 199, 984, 2736, 3025, 3071, 3195, 3549 |
| BfoI | RGCGCY | 3 cut(s) | 488, 2035, 4008 |
| BfrI | CTTAAG | 1 cut(s) | 3937 |
| BfuAI | ACCTGC | 3 cut(s) | 968, 1988, 4028 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2451 |
| BlnI | CCTAGG | 1 cut(s) | 3229 |
| BmcAI | AGTACT | 2 cut(s) | 667, 4215 |
| Bme18I | GGWCC | 4 cut(s) | 1535, 2118, 2135, 2651 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 2568, 3462 |
| BmgT120I | GGNCC | 8 cut(s) | 1472, 1535, 1556, 2118, 2135, 2403, 2651, 2882 |
| BmrI | ACTGGG | 4 cut(s) | 231, 1479, 1759, 2352 |
| BmsI | GCATC | 9 cut(s) | 991, 1342, 1802, 2290, 2530, 2917, 2947, 3195, 3661 |
| BmuI | ACTGGG | 4 cut(s) | 231, 1479, 1759, 2352 |
| BpiI | GAAGAC | 2 cut(s) | 1196, 3260 |
| BpmI | CTGGAG | 4 cut(s) | 897, 2910, 3762, 3899 |
| Bpu10I | CCTNAGC | 2 cut(s) | 110, 180 |
| Bpu14I | TTCGAA | 1 cut(s) | 1291 |
| BpuEI | CTTGAG | 2 cut(s) | 280, 3787 |
| BpuMI | CCSGG | 4 cut(s) | 409, 472, 587, 3992 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2304 |
| BsaHI | GRCGYC | 1 cut(s) | 485 |
| BsaI | GGTCTC | 2 cut(s) | 215, 2687 |
| BsaJI | CCNNGG | 6 cut(s) | 313, 512, 1119, 2654, 2903, 3229 |
| BsaWI | WCCGGW | 3 cut(s) | 833, 2150, 2290 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 643, 655, 673, 685, 1217, 1247, 2548, 2578 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 340, 341, 1153, 2144, 2240, 2281, 3506, 3991 |
| Bse118I | RCCGGY | 3 cut(s) | 2290, 2749, 3407 |
| Bse1I | ACTGG | 8 cut(s) | 226, 454, 1474, 1732, 1754, 1816, 2347, 2401 |
| Bse3DI | GCAATG | 2 cut(s) | 100, 4300 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2304 |
| BseBI | CCWGG | 9 cut(s) | 315, 513, 1476, 1502, 1539, 2139, 3538, 4162, 4265 |
| BseDI | CCNNGG | 6 cut(s) | 313, 512, 1119, 2654, 2903, 3229 |
| BseJI | GATNNNNATC | 1 cut(s) | 2304 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 340, 341, 1153, 2144, 2240, 2281, 3506, 3991 |
| BseMI | GCAATG | 2 cut(s) | 100, 4300 |
| BseMII | CTCAG | 7 cut(s) | 30, 194, 1414, 2550, 2722, 2864, 3434 |
| BseNI | ACTGG | 8 cut(s) | 226, 454, 1474, 1732, 1754, 1816, 2347, 2401 |
| BseRI | GAGGAG | 6 cut(s) | 567, 647, 804, 2265, 2675, 3318 |
| BseSI | GKGCMC | 1 cut(s) | 3166 |
| BseXI | GCAGC | 8 cut(s) | 317, 816, 970, 1581, 1866, 2740, 2983, 3175 |
| BseYI | CCCAGC | 1 cut(s) | 1819 |
| BsgI | GTGCAG | 1 cut(s) | 1206 |
| Bsh1236I | CGCG | 1 cut(s) | 146 |
| BshFI | GGCC | 6 cut(s) | 1474, 1558, 2405, 2884, 3255, 3840 |
| BshNI | GGYRCC | 2 cut(s) | 484, 2453 |
| BshTI | ACCGGT | 1 cut(s) | 2290 |
| BsiHKAI | GWGCWC | 6 cut(s) | 249, 350, 1288, 1611, 2709, 3166 |
| BslFI | GGGAC | 4 cut(s) | 992, 1003, 2394, 2401 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 340, 341, 1153, 2144, 2240, 2281, 3506, 3991 |
| BsmAI | GTCTC | 7 cut(s) | 132, 215, 713, 2555, 2687, 3697, 3879 |
| BsmBI | CGTCTC | 1 cut(s) | 713 |
| BsmFI | GGGAC | 4 cut(s) | 992, 1003, 2394, 2401 |
| BsmI | GAATGC | 4 cut(s) | 2447, 2960, 3030, 3635 |
| BsnI | GGCC | 6 cut(s) | 1474, 1558, 2405, 2884, 3255, 3840 |
| Bso31I | GGTCTC | 2 cut(s) | 215, 2687 |
| Bsp119I | TTCGAA | 1 cut(s) | 1291 |
| Bsp1286I | GDGCHC | 9 cut(s) | 249, 350, 1288, 1611, 2063, 2488, 2709, 2777, 3166 |
| Bsp1407I | TGTACA | 2 cut(s) | 1768, 4287 |
| BspANI | GGCC | 6 cut(s) | 1474, 1558, 2405, 2884, 3255, 3840 |
| BspCNI | CTCAG | 7 cut(s) | 29, 193, 1413, 2551, 2721, 2863, 3433 |
| BspFNI | CGCG | 1 cut(s) | 146 |
| BspHI | TCATGA | 1 cut(s) | 3363 |
| BspMAI | CTGCAG | 3 cut(s) | 203, 988, 2740 |
| BspMI | ACCTGC | 3 cut(s) | 968, 1988, 4028 |
| BspQI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| BspT104I | TTCGAA | 1 cut(s) | 1291 |
| BspT107I | GGYRCC | 2 cut(s) | 484, 2453 |
| BspTI | CTTAAG | 1 cut(s) | 3937 |
| BspTNI | GGTCTC | 2 cut(s) | 215, 2687 |
| BsrDI | GCAATG | 2 cut(s) | 100, 4300 |
| BsrFI | RCCGGY | 3 cut(s) | 2290, 2749, 3407 |
| BsrGI | TGTACA | 2 cut(s) | 1768, 4287 |
| BsrI | ACTGG | 8 cut(s) | 226, 454, 1474, 1732, 1754, 1816, 2347, 2401 |
| BssAI | RCCGGY | 3 cut(s) | 2290, 2749, 3407 |
| BssECI | CCNNGG | 6 cut(s) | 313, 512, 1119, 2654, 2903, 3229 |
| BssNAI | GTATAC | 1 cut(s) | 2638 |
| BssNI | GRCGYC | 1 cut(s) | 485 |
| BssT1I | CCWWGG | 3 cut(s) | 1119, 2903, 3229 |
| Bst1107I | GTATAC | 1 cut(s) | 2638 |
| Bst2UI | CCWGG | 9 cut(s) | 315, 513, 1476, 1502, 1539, 2139, 3538, 4162, 4265 |
| Bst4CI | ACNGT | 7 cut(s) | 1604, 2215, 2612, 2655, 3626, 4218, 4308 |
| Bst6I | CTCTTC | 6 cut(s) | 53, 1239, 1293, 1686, 1780, 3339 |
| BstACI | GRCGYC | 1 cut(s) | 485 |
| BstAFI | CTTAAG | 1 cut(s) | 3937 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 983, 4043 |
| BstAUI | TGTACA | 2 cut(s) | 1768, 4287 |
| BstBI | TTCGAA | 1 cut(s) | 1291 |
| BstDSI | CCRYGG | 1 cut(s) | 2654 |
| BstFNI | CGCG | 1 cut(s) | 146 |
| BstH2I | RGCGCY | 3 cut(s) | 488, 2035, 4008 |
| BstHHI | GCGC | 5 cut(s) | 148, 487, 2034, 3429, 4007 |
| BstMAI | GTCTC | 7 cut(s) | 132, 215, 713, 2555, 2687, 3697, 3879 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 154, 169, 184, 983, 1361, 1860, 2451, 2762, 4043 |
| BstNI | CCWGG | 9 cut(s) | 315, 513, 1476, 1502, 1539, 2139, 3538, 4162, 4265 |
| BstNSI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 3667 |
| BstSFI | CTRYAG | 7 cut(s) | 199, 984, 2736, 3025, 3071, 3195, 3549 |
| BstSLI | GKGCMC | 1 cut(s) | 3166 |
| BstUI | CGCG | 1 cut(s) | 146 |
| BstV1I | GCAGC | 8 cut(s) | 317, 816, 970, 1581, 1866, 2740, 2983, 3175 |
| BstV2I | GAAGAC | 2 cut(s) | 1196, 3260 |
| BstX2I | RGATCY | 5 cut(s) | 607, 1541, 1730, 2147, 3847 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 88, 618, 1126, 1393, 3060 |
| BstYI | RGATCY | 5 cut(s) | 607, 1541, 1730, 2147, 3847 |
| BstZ17I | GTATAC | 1 cut(s) | 2638 |
| BsuRI | GGCC | 6 cut(s) | 1474, 1558, 2405, 2884, 3255, 3840 |
| BtgI | CCRYGG | 1 cut(s) | 2654 |
| BtgZI | GCGATG | 1 cut(s) | 138 |
| BtsI | GCAGTG | 1 cut(s) | 208 |
| BveI | ACCTGC | 3 cut(s) | 968, 1988, 4028 |
| CaiI | CAGNNNCTG | 2 cut(s) | 983, 3557 |
| CciI | TCATGA | 1 cut(s) | 3363 |
| CfoI | GCGC | 5 cut(s) | 148, 487, 2034, 3429, 4007 |
| Cfr10I | RCCGGY | 3 cut(s) | 2290, 2749, 3407 |
| Cfr13I | GGNCC | 8 cut(s) | 1472, 1535, 1556, 2118, 2135, 2403, 2651, 2882 |
| CseI | GACGC | 1 cut(s) | 3543 |
| CsiI | ACCWGGT | 1 cut(s) | 1500 |
| Csp6I | GTAC | 4 cut(s) | 666, 1769, 4214, 4288 |
| CspAI | ACCGGT | 1 cut(s) | 2290 |
| CviQI | GTAC | 4 cut(s) | 666, 1769, 4214, 4288 |
| DinI | GGCGCC | 1 cut(s) | 486 |
| DraIII | CACNNNGTG | 2 cut(s) | 1753, 2192 |
| DriI | GACNNNNNGTC | 2 cut(s) | 2568, 3462 |
| EaeI | YGGCCR | 1 cut(s) | 3838 |
| Eam1104I | CTCTTC | 6 cut(s) | 53, 1239, 1293, 1686, 1780, 3339 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 2568, 3462 |
| EarI | CTCTTC | 6 cut(s) | 53, 1239, 1293, 1686, 1780, 3339 |
| EciI | GGCGGA | 1 cut(s) | 159 |
| Ecl136II | GAGCTC | 2 cut(s) | 247, 1609 |
| Eco130I | CCWWGG | 3 cut(s) | 1119, 2903, 3229 |
| Eco24I | GRGCYC | 5 cut(s) | 249, 1611, 2063, 2488, 2777 |
| Eco31I | GGTCTC | 2 cut(s) | 215, 2687 |
| Eco32I | GATATC | 2 cut(s) | 2597, 3723 |
| Eco47I | GGWCC | 4 cut(s) | 1535, 2118, 2135, 2651 |
| Eco47III | AGCGCT | 2 cut(s) | 2033, 4006 |
| Eco53kI | GAGCTC | 2 cut(s) | 247, 1609 |
| Eco57I | CTGAAG | 4 cut(s) | 922, 1665, 1667, 3320 |
| EcoICRI | GAGCTC | 2 cut(s) | 247, 1609 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1556, 2135, 2403 |
| EcoRI | GAATTC | 2 cut(s) | 98, 1321 |
| EcoRII | CCWGG | 9 cut(s) | 313, 511, 1474, 1500, 1537, 2137, 3536, 4160, 4263 |
| EcoRV | GATATC | 2 cut(s) | 2597, 3723 |
| EcoT14I | CCWWGG | 3 cut(s) | 1119, 2903, 3229 |
| EcoT22I | ATGCAT | 2 cut(s) | 2305, 2962 |
| EcoT38I | GRGCYC | 5 cut(s) | 249, 1611, 2063, 2488, 2777 |
| EgeI | GGCGCC | 1 cut(s) | 486 |
| EheI | GGCGCC | 1 cut(s) | 486 |
| ErhI | CCWWGG | 3 cut(s) | 1119, 2903, 3229 |
| Esp3I | CGTCTC | 1 cut(s) | 713 |
| FaqI | GGGAC | 4 cut(s) | 992, 1003, 2394, 2401 |
| FauI | CCCGC | 3 cut(s) | 472, 1856, 2050 |
| FauNDI | CATATG | 3 cut(s) | 613, 3214, 3794 |
| FbaI | TGATCA | 3 cut(s) | 459, 3130, 4080 |
| FblI | GTMKAC | 4 cut(s) | 2637, 3024, 3079, 3976 |
| FriOI | GRGCYC | 5 cut(s) | 249, 1611, 2063, 2488, 2777 |
| GlaI | GCGC | 5 cut(s) | 147, 486, 2033, 3428, 4006 |
| GsaI | CCCAGC | 1 cut(s) | 1823 |
| GsuI | CTGGAG | 4 cut(s) | 897, 2910, 3762, 3899 |
| HaeII | RGCGCY | 3 cut(s) | 488, 2035, 4008 |
| HaeIII | GGCC | 6 cut(s) | 1474, 1558, 2405, 2884, 3255, 3840 |
| HgaI | GACGC | 1 cut(s) | 3543 |
| HhaI | GCGC | 5 cut(s) | 148, 487, 2034, 3429, 4007 |
| Hin1I | GRCGYC | 1 cut(s) | 485 |
| Hin6I | GCGC | 5 cut(s) | 146, 485, 2032, 3427, 4005 |
| HinP1I | GCGC | 5 cut(s) | 146, 485, 2032, 3427, 4005 |
| HincII | GTYRAC | 1 cut(s) | 3080 |
| HindII | GTYRAC | 1 cut(s) | 3080 |
| HindIII | AAGCTT | 1 cut(s) | 256 |
| HphI | GGTGA | 6 cut(s) | 43, 52, 530, 779, 1765, 2204 |
| Hpy99I | CGWCG | 3 cut(s) | 1901, 2772, 3084 |
| HpyCH4III | ACNGT | 7 cut(s) | 1604, 2215, 2612, 2655, 3626, 4218, 4308 |
| HpyCH4IV | ACGT | 2 cut(s) | 3773, 4030 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 154, 169, 184, 983, 1361, 1860, 2451, 2762, 4043 |
| HpySE526I | ACGT | 2 cut(s) | 3773, 4030 |
| Hsp92I | GRCGYC | 1 cut(s) | 485 |
| HspAI | GCGC | 5 cut(s) | 146, 485, 2032, 3427, 4005 |
| KasI | GGCGCC | 1 cut(s) | 484 |
| Ksp22I | TGATCA | 3 cut(s) | 459, 3130, 4080 |
| LguI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| Lsp1109I | GCAGC | 8 cut(s) | 317, 816, 970, 1581, 1866, 2740, 2983, 3175 |
| LweI | GCATC | 9 cut(s) | 991, 1342, 1802, 2290, 2530, 2917, 2947, 3195, 3661 |
| MabI | ACCWGGT | 1 cut(s) | 1500 |
| MaeII | ACGT | 2 cut(s) | 3773, 4030 |
| MfeI | CAATTG | 1 cut(s) | 855 |
| MflI | RGATCY | 5 cut(s) | 607, 1541, 1730, 2147, 3847 |
| MhlI | GDGCHC | 9 cut(s) | 249, 350, 1288, 1611, 2063, 2488, 2709, 2777, 3166 |
| MlsI | TGGCCA | 1 cut(s) | 3840 |
| MluNI | TGGCCA | 1 cut(s) | 3840 |
| Mly113I | GGCGCC | 1 cut(s) | 485 |
| MlyI | GAGTC | 9 cut(s) | 175, 271, 1415, 2557, 2863, 3085, 3376, 3699, 4120 |
| MmeI | TCCRAC | 7 cut(s) | 609, 696, 1047, 1513, 2096, 2262, 4173 |
| Mox20I | TGGCCA | 1 cut(s) | 3840 |
| Mph1103I | ATGCAT | 2 cut(s) | 2305, 2962 |
| MroXI | GAANNNNTTC | 4 cut(s) | 895, 1248, 1632, 3114 |
| MscI | TGGCCA | 1 cut(s) | 3840 |
| MslI | CAYNNNNRTG | 2 cut(s) | 291, 2578 |
| Msp20I | TGGCCA | 1 cut(s) | 3840 |
| MspA1I | CMGCKG | 2 cut(s) | 1857, 3919 |
| MspCI | CTTAAG | 1 cut(s) | 3937 |
| MunI | CAATTG | 1 cut(s) | 855 |
| Mva1269I | GAATGC | 4 cut(s) | 2447, 2960, 3030, 3635 |
| MvaI | CCWGG | 9 cut(s) | 315, 513, 1476, 1502, 1539, 2139, 3538, 4162, 4265 |
| MvnI | CGCG | 1 cut(s) | 146 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 154, 169, 184, 983, 1361, 1860, 2451, 2762, 4043 |
| NarI | GGCGCC | 1 cut(s) | 485 |
| NciI | CCSGG | 4 cut(s) | 409, 472, 587, 3992 |
| NdeI | CATATG | 3 cut(s) | 613, 3214, 3794 |
| NmeAIII | GCCGAG | 1 cut(s) | 189 |
| NmuCI | GTSAC | 4 cut(s) | 466, 565, 3657, 4016 |
| NsiI | ATGCAT | 2 cut(s) | 2305, 2962 |
| NspI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 3667 |
| NspV | TTCGAA | 1 cut(s) | 1291 |
| PaeI | GCATGC | 1 cut(s) | 3667 |
| PagI | TCATGA | 1 cut(s) | 3363 |
| PaqCI | CACCTGC | 2 cut(s) | 968, 1988 |
| PciI | ACATGT | 1 cut(s) | 3523 |
| PciSI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 161, 728, 2776 |
| PctI | GAATGC | 4 cut(s) | 2447, 2960, 3030, 3635 |
| PdmI | GAANNNNTTC | 4 cut(s) | 895, 1248, 1632, 3114 |
| PfoI | TCCNGGA | 2 cut(s) | 585, 4160 |
| PinAI | ACCGGT | 1 cut(s) | 2290 |
| PleI | GAGTC | 9 cut(s) | 174, 270, 1414, 2557, 2862, 3084, 3375, 3699, 4120 |
| PluTI | GGCGCC | 1 cut(s) | 488 |
| PpsI | GAGTC | 9 cut(s) | 174, 270, 1414, 2557, 2862, 3084, 3375, 3699, 4120 |
| PpuMI | RGGWCCY | 1 cut(s) | 2135 |
| PscI | ACATGT | 1 cut(s) | 3523 |
| PshBI | ATTAAT | 2 cut(s) | 2337, 2985 |
| PsiI | TTATAA | 2 cut(s) | 1724, 3822 |
| Psp124BI | GAGCTC | 2 cut(s) | 249, 1611 |
| Psp5II | RGGWCCY | 1 cut(s) | 2135 |
| Psp6I | CCWGG | 9 cut(s) | 313, 511, 1474, 1500, 1537, 2137, 3536, 4160, 4263 |
| PspFI | CCCAGC | 1 cut(s) | 1819 |
| PspGI | CCWGG | 9 cut(s) | 313, 511, 1474, 1500, 1537, 2137, 3536, 4160, 4263 |
| PspPI | GGNCC | 8 cut(s) | 1472, 1535, 1556, 2118, 2135, 2403, 2651, 2882 |
| PspPPI | RGGWCCY | 1 cut(s) | 2135 |
| PstI | CTGCAG | 3 cut(s) | 203, 988, 2740 |
| PstNI | CAGNNNCTG | 2 cut(s) | 983, 3557 |
| PsuI | RGATCY | 5 cut(s) | 607, 1541, 1730, 2147, 3847 |
| PvuII | CAGCTG | 1 cut(s) | 3919 |
| RsaI | GTAC | 4 cut(s) | 667, 1770, 4215, 4289 |
| RsaNI | GTAC | 4 cut(s) | 666, 1769, 4214, 4288 |
| RseI | CAYNNNNRTG | 2 cut(s) | 291, 2578 |
| SacI | GAGCTC | 2 cut(s) | 249, 1611 |
| SalI | GTCGAC | 1 cut(s) | 3078 |
| SapI | GCTCTTC | 2 cut(s) | 1239, 1293 |
| Sau96I | GGNCC | 8 cut(s) | 1472, 1535, 1556, 2118, 2135, 2403, 2651, 2882 |
| ScaI | AGTACT | 2 cut(s) | 667, 4215 |
| SchI | GAGTC | 9 cut(s) | 175, 271, 1415, 2557, 2863, 3085, 3376, 3699, 4120 |
| SduI | GDGCHC | 9 cut(s) | 249, 350, 1288, 1611, 2063, 2488, 2709, 2777, 3166 |
| SexAI | ACCWGGT | 1 cut(s) | 1500 |
| SfaNI | GCATC | 9 cut(s) | 991, 1342, 1802, 2290, 2530, 2917, 2947, 3195, 3661 |
| SfcI | CTRYAG | 7 cut(s) | 199, 984, 2736, 3025, 3071, 3195, 3549 |
| SfoI | GGCGCC | 1 cut(s) | 486 |
| SfuI | TTCGAA | 1 cut(s) | 1291 |
| SinI | GGWCC | 4 cut(s) | 1535, 2118, 2135, 2651 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 291, 2578 |
| SmlI | CTYRAG | 3 cut(s) | 259, 3766, 3937 |
| SmoI | CTYRAG | 3 cut(s) | 259, 3766, 3937 |
| SpeI | ACTAGT | 2 cut(s) | 500, 668 |
| SphI | GCATGC | 1 cut(s) | 3667 |
| SspDI | GGCGCC | 1 cut(s) | 484 |
| SspI | AATATT | 1 cut(s) | 364 |
| SstI | GAGCTC | 2 cut(s) | 249, 1611 |
| StyI | CCWWGG | 3 cut(s) | 1119, 2903, 3229 |
| TaaI | ACNGT | 7 cut(s) | 1604, 2215, 2612, 2655, 3626, 4218, 4308 |
| TaiI | ACGT | 2 cut(s) | 3776, 4033 |
| TatI | WGTACW | 4 cut(s) | 665, 1768, 4213, 4287 |
| TauI | GCSGC | 2 cut(s) | 187, 490 |
| TseFI | GTSAC | 4 cut(s) | 466, 565, 3657, 4016 |
| TseI | GCWGC | 8 cut(s) | 330, 804, 983, 1569, 1854, 2753, 2996, 3188 |
| Tsp45I | GTSAC | 4 cut(s) | 466, 565, 3657, 4016 |
| TspGWI | ACGGA | 2 cut(s) | 1914, 3097 |
| Vha464I | CTTAAG | 1 cut(s) | 3937 |
| VneI | GTGCAC | 1 cut(s) | 3162 |
| VpaK11BI | GGWCC | 4 cut(s) | 1535, 2118, 2135, 2651 |
| VspI | ATTAAT | 2 cut(s) | 2337, 2985 |
| XapI | RAATTY | 9 cut(s) | 98, 894, 1167, 1321, 1432, 1462, 2095, 3110, 4269 |
| XceI | RCATGY | 4 cut(s) | 2605, 3494, 3527, 3667 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 3387, 3675 |
| XmaJI | CCTAGG | 1 cut(s) | 3229 |
| XmiI | GTMKAC | 4 cut(s) | 2637, 3024, 3079, 3976 |
| XmnI | GAANNNNTTC | 4 cut(s) | 895, 1248, 1632, 3114 |
| ZrmI | AGTACT | 2 cut(s) | 667, 4215 |
| Zsp2I | ATGCAT | 2 cut(s) | 2305, 2962 |