Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2D

Orthogroup ID

OG0000567

Physical Location & Seq

Genomic Coordinates Forward (+)

9766115 .. 9769602

Gene Structure 3488 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2DG117800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1107 bp

ATGGCTCGAAGAACGATACCGATCCTCCGCCACCTCCTAACAAAGCCCCGACCCGGCGTCACGGCCCAAACCCGATCGGTCACCTACATGCCCCGACCCGGCGACGGAGCTCCGCGCGCCGTGACTCTAATCCCCGGCGACGGAATCGGACCGCTCGTCACGAACGCCGTGGAGCAGGTGATGGAGGCGATGCACGCGCCGGTCTACTTCGAGAAGTACGAGGTCACCGGCGACATGCCGAGGGTGCCGGAGGAGGTGATCGAGTCGATCAGGAAGAACAAGGTGTGCCTGAAAGGCGGGCTGGCGACGCCGATGGGCGGCGGCGTCAACTCGCTGAACATGCAGCTCCGGCGAGATCTCGATCTCTATGCCTCGCTCGTCAACTGCTTCAATCTGCGTGGCTTGCAGACCAAGCATGACAACGTCGACATTGTGGTGATCAGGGAGAACACCGAGGGCGAGTACTCGGGGCTCGAGCACGAGGTCATTCCTGGAGTCGTTGAAAGCCTTAAGGTGATCACAAAGTTCTGTTCAGAGCGTATTGCTAGATATGCTTTTGAGTATGCTTACCTGAACAACAGAAAGAAGGTGACTGCTGTGCACAAAGCAAACATTATGAAGCTTGCAGATGGTCTGTTCTTAGAGTCTTGTCGTGAGGTGGCTACAAATTATCCAGGGATCACTTACAATGAAGTAATTGTTGACAACTGCTGCATGCAACTTGTTGCAAGGCCCGAACAATTTGATGTCATGGTGACACCCAATCTTTATGGTAACCTAGTTGCAAATACAGCCGCTGGTATTGCTGGAGGCACTGGCGTCATGCCAGGAGGAAATGTGGGGGCTGATCATGCTATTTTTGAGCAAGGTGCTTCAGCAGGAAATGTGGGGAATCAGAAAATATTGGATCAAAAGAAAGCAAACCCAGTAGCCTTGCTTCTCTCCTCTGCCATGATGTTGAGACATTTGCAATTTCCTTCCTTCTCTGATCGATTAGAAAATGCTGTTGAAAGAGTAATCTTAGAGGGCAAGTTCAGGACAAAGGACCTTGGAGGACATAGCACTACCCAAGAGGTTGTTGATGCGGTCATTGCTGCCTTAGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004448 GO:0004449 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006102 GO:0008150 GO:0008152 GO:0009060 GO:0009987 GO:0015980 GO:0016491 GO:0016614 GO:0016616 GO:0016999 GO:0017144 GO:0019752 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0045333 GO:0048046 GO:0055114 GO:0071704 GO:0072350

KEGG Pathways

Metabolic & Signaling

ko00020 ko01100 ko01110 ko01120 ko01130 ko01200 ko01210 ko01230 map00020 map01100 map01110 map01120 map01130 map01200 map01210 map01230

Pfam Domains

Protein Families

Iso_dh

Protein Analysis

368

Amino Acids

40.12

Weight (kDa)

6.72

Isoelectric Point (pI)

34.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Iso_dh	PF00180	41 - 363	1.4e-79	Isocitrate/isopropylmalate dehydrogenase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000567)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35650
fragaria_vesca	FvH4_1g10550 FvH4_1g10550
malus_domestica	MD02G1119700.v1.1 MD15G1233500.v1.1
prunus_persica	Prupe.7G179400_v2.0.a1 Prupe.7G179400_v2.0.a1 Prupe.7G179400_v2.0.a1 Prupe.7G179400_v2.0.a1
pyrus_communis	pycom02g09320
rosa_chinensis	RchiOBHm_Chr0c39g0503111 RchiOBHm_Chr2g0097601 RchiOBHm_Chr2g0110731 RchiOBHm_Chr2g0135691 RchiOBHm_Chr2g0145421 RchiOBHm_Chr4g0395871 RchiOBHm_Chr4g0395881 RchiOBHm_Chr5g0074921 RchiOBHm_Chr6g0260871 RchiOBHm_Chr6g0268821
rosa_laevigata	RLG00000013432 RLG00000014392 RLG00000016727 RLG00000026056
rosa_multiflora	Rmu_co8326981.1_g000001 Rmu_sc0000104.1_g000032 Rmu_sc0002193.1_g000005 Rmu_sc0002271.1_g000027 Rmu_sc0004220.1_g000002 Rmu_sc0005347.1_g000007 Rmu_sc0006625.1_g000001 Rmu_sc0008835.1_g000001 Rmu_sc0009379.1_g000004
rosa_roxburghii	Rroxscaffold_2G00144670 Rroxscaffold_2G00153630
rosa_rugosa	Rorug01G0401400 Rorug02G0067700 Rorug02G0231100 Rorug03G0226800 Rorug03G0356000 Rorug04G0008700 Rorug05G0159200 Rorug05G0267100.1 Rorug05G0575000 Rorug05G0575000 Rorug06G0067200
rosa_samantha	Rh1BG010200 Rh1BG010300 Rh1BG252100 Rh1DG281100 Rh2AG114000 Rh2AG259300 Rh2AG567800 Rh2BG116800 Rh2BG383600 Rh2BG456400 Rh2CG118800 Rh2CG223900 Rh2DG117800 Rh2DG267700 Rh2DG466300 Rh3DG073900 Rh4AG245200 Rh4AG258800 Rh4BG250400 Rh4BG264600 Rh5AG127500 Rh5AG128100 Rh5AG506600 Rh5AG506700 Rh5AG507200 Rh5AG507300 Rh6AG184600 Rh6BG188000 Rh6CG192200 Rh6CG209400 Rh6DG437700 Rh6DG482100 Rh7AG364600 Rh7BG391200
rosa_wichuraiana	Rw2G008920 Rw3G027310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	166
Acc36I	ACCTGC	1 cut(s)	166
AccB1I	GGYRCC	1 cut(s)	244
AccBSI	CCGCTC	1 cut(s)	154
AccI	GTMKAC	2 cut(s)	204, 426
AccII	CGCG	3 cut(s)	115, 117, 197
AciI	CCGC	8 cut(s)	28, 113, 152, 297, 318, 321, 795, 1085
AclWI	GGATC	3 cut(s)	16, 686, 915
AcuI	CTGAAG	1 cut(s)	858
AcyI	GRCGYC	4 cut(s)	57, 308, 324, 819
AfaI	GTAC	2 cut(s)	218, 464
AfiI	CCNNNNNNNGG	5 cut(s)	53, 98, 104, 140, 317
AflII	CTTAAG	1 cut(s)	509
AgsI	TTSAA	3 cut(s)	391, 503, 1010
AhdI	GACNNNNNGTC	2 cut(s)	56, 155
AjnI	CCWGG	3 cut(s)	490, 673, 826
AluBI	AGCT	3 cut(s)	110, 346, 622
AluI	AGCT	3 cut(s)	110, 346, 622
Alw21I	GWGCWC	3 cut(s)	112, 480, 603
Alw26I	GTCTC	1 cut(s)	955
Alw44I	GTGCAC	1 cut(s)	599
AlwI	GGATC	3 cut(s)	16, 686, 915
AlwNI	CAGNNNCTG	1 cut(s)	797
Ama87I	CYCGRG	2 cut(s)	466, 473
AoxI	GGCC	2 cut(s)	63, 731
ApaLI	GTGCAC	1 cut(s)	599
ApeKI	GCWGC	3 cut(s)	343, 711, 1094
AspLEI	GCGC	3 cut(s)	117, 119, 199
AspS9I	GGNCC	4 cut(s)	64, 149, 732, 1045
AsuC2I	CCSGG	3 cut(s)	54, 99, 135
AsuHPI	GGTGA	8 cut(s)	73, 190, 217, 268, 448, 526, 601, 766
AvaI	CYCGRG	2 cut(s)	466, 473
AvaII	GGWCC	2 cut(s)	149, 1045
BaeGI	GKGCMC	1 cut(s)	603
BanI	GGYRCC	1 cut(s)	244
BanII	GRGCYC	2 cut(s)	112, 474
BarI	GAAGNNNNNNTAC	2 cut(s)	921, 953
BauI	CACGAG	1 cut(s)	479
Bbv12I	GWGCWC	3 cut(s)	112, 480, 603
BbvI	GCAGC	3 cut(s)	355, 698, 1081
BccI	CCATC	3 cut(s)	175, 307, 623
BceAI	ACGGC	3 cut(s)	78, 104, 152
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	3 cut(s)	492, 675, 828
BclI	TGATCA	3 cut(s)	438, 516, 847
BcnI	CCSGG	3 cut(s)	54, 99, 135
BcoDI	GTCTC	1 cut(s)	955
BfaI	CTAG	2 cut(s)	546, 779
BfrI	CTTAAG	1 cut(s)	509
BfuAI	ACCTGC	1 cut(s)	166
BglI	GCCNNNNNGGC	1 cut(s)	294
BglII	AGATCT	1 cut(s)	355
BisI	GCNGC	6 cut(s)	319, 322, 344, 712, 795, 1095
BlsI	GCNGC	6 cut(s)	320, 323, 345, 713, 796, 1096
BmcAI	AGTACT	1 cut(s)	464
Bme1390I	CCNGG	6 cut(s)	54, 99, 135, 492, 675, 828
Bme18I	GGWCC	2 cut(s)	149, 1045
BmeRI	GACNNNNNGTC	2 cut(s)	56, 155
BmeT110I	CYCGRG	2 cut(s)	466, 473
BmgT120I	GGNCC	4 cut(s)	64, 149, 732, 1045
BmiI	GGNNCC	1 cut(s)	246
BmrFI	CCNGG	6 cut(s)	54, 99, 135, 492, 675, 828
BmrI	ACTGGG	1 cut(s)	920
BmsI	GCATC	2 cut(s)	180, 1072
BmuI	ACTGGG	1 cut(s)	920
BpmI	CTGGAG	2 cut(s)	513, 828
BpuMI	CCSGG	3 cut(s)	54, 99, 135
Bsa29I	ATCGAT	1 cut(s)	991
BsaBI	GATNNNNATC	2 cut(s)	20, 360
BsaHI	GRCGYC	4 cut(s)	57, 308, 324, 819
BsaJI	CCNNGG	6 cut(s)	133, 168, 239, 453, 674, 1048
BsaXI	ACNNNNNCTCC	4 cut(s)	9, 39, 822, 852
Bsc4I	CCNNNNNNNGG	5 cut(s)	53, 98, 104, 140, 317
Bse118I	RCCGGY	2 cut(s)	199, 227
Bse1I	ACTGG	2 cut(s)	820, 926
Bse3DI	GCAATG	1 cut(s)	1089
Bse8I	GATNNNNATC	2 cut(s)	20, 360
BseBI	CCWGG	3 cut(s)	492, 675, 828
BseCI	ATCGAT	1 cut(s)	991
BseDI	CCNNGG	6 cut(s)	133, 168, 239, 453, 674, 1048
BseJI	GATNNNNATC	2 cut(s)	20, 360
BseLI	CCNNNNNNNGG	5 cut(s)	53, 98, 104, 140, 317
BseMI	GCAATG	1 cut(s)	1089
BseNI	ACTGG	2 cut(s)	820, 926
BsePI	GCGCGC	1 cut(s)	115
BseRI	GAGGAG	2 cut(s)	266, 934
BseSI	GKGCMC	1 cut(s)	603
BseXI	GCAGC	3 cut(s)	355, 698, 1081
Bsh1236I	CGCG	3 cut(s)	115, 117, 197
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	2 cut(s)	65, 733
BshNI	GGYRCC	1 cut(s)	244
BshVI	ATCGAT	1 cut(s)	991
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	3 cut(s)	112, 480, 603
BsiHKCI	CYCGRG	2 cut(s)	466, 473
BsiSI	CCGG	7 cut(s)	54, 99, 135, 200, 228, 248, 349
BslI	CCNNNNNNNGG	5 cut(s)	53, 98, 104, 140, 317
BsmAI	GTCTC	1 cut(s)	955
BsnI	GGCC	2 cut(s)	65, 733
BsoBI	CYCGRG	2 cut(s)	466, 473
Bsp1286I	GDGCHC	4 cut(s)	112, 474, 480, 603
BspACI	CCGC	8 cut(s)	28, 113, 152, 297, 318, 321, 795, 1085
BspANI	GGCC	2 cut(s)	65, 733
BspDI	ATCGAT	1 cut(s)	991
BspFNI	CGCG	3 cut(s)	115, 117, 197
BspLI	GGNNCC	1 cut(s)	246
BspMI	ACCTGC	1 cut(s)	166
BspPI	GGATC	3 cut(s)	16, 686, 915
BspT107I	GGYRCC	1 cut(s)	244
BspTI	CTTAAG	1 cut(s)	509
BsrBI	CCGCTC	1 cut(s)	154
BsrDI	GCAATG	1 cut(s)	1089
BsrFI	RCCGGY	2 cut(s)	199, 227
BsrI	ACTGG	2 cut(s)	820, 926
BssAI	RCCGGY	2 cut(s)	199, 227
BssECI	CCNNGG	6 cut(s)	133, 168, 239, 453, 674, 1048
BssHII	GCGCGC	1 cut(s)	115
BssNI	GRCGYC	4 cut(s)	57, 308, 324, 819
BssSI	CACGAG	1 cut(s)	479
BssT1I	CCWWGG	1 cut(s)	1048
Bst2BI	CACGAG	1 cut(s)	479
Bst2UI	CCWGG	3 cut(s)	492, 675, 828
BstACI	GRCGYC	4 cut(s)	57, 308, 324, 819
BstAFI	CTTAAG	1 cut(s)	509
BstC8I	GCNNGC	7 cut(s)	117, 195, 299, 303, 404, 624, 716
BstDEI	CTNAG	3 cut(s)	640, 1021, 1099
BstDSI	CCRYGG	1 cut(s)	168
BstEII	GGTNACC	3 cut(s)	79, 223, 773
BstFNI	CGCG	3 cut(s)	115, 117, 197
BstHHI	GCGC	3 cut(s)	117, 119, 199
BstMAI	GTCTC	1 cut(s)	955
BstMCI	CGRYCG	1 cut(s)	77
BstNI	CCWGG	3 cut(s)	492, 675, 828
BstNSI	RCATGY	4 cut(s)	91, 238, 343, 718
BstPI	GGTNACC	3 cut(s)	79, 223, 773
BstSCI	CCNGG	6 cut(s)	52, 97, 133, 490, 673, 826
BstSLI	GKGCMC	1 cut(s)	603
BstUI	CGCG	3 cut(s)	115, 117, 197
BstV1I	GCAGC	3 cut(s)	355, 698, 1081
BstX2I	RGATCY	1 cut(s)	355
BstYI	RGATCY	1 cut(s)	355
Bsu15I	ATCGAT	1 cut(s)	991
BsuRI	GGCC	2 cut(s)	65, 733
BsuTUI	ATCGAT	1 cut(s)	991
BtgI	CCRYGG	1 cut(s)	168
BtgZI	GCGATG	1 cut(s)	203
BtsIMutI	CAGTG	1 cut(s)	813
BveI	ACCTGC	1 cut(s)	166
Cac8I	GCNNGC	7 cut(s)	117, 195, 299, 303, 404, 624, 716
CaiI	CAGNNNCTG	1 cut(s)	797
CfoI	GCGC	3 cut(s)	117, 119, 199
Cfr10I	RCCGGY	2 cut(s)	199, 227
Cfr13I	GGNCC	4 cut(s)	64, 149, 732, 1045
ClaI	ATCGAT	1 cut(s)	991
CpoI	CGGWCCG	1 cut(s)	149
CseI	GACGC	4 cut(s)	46, 313, 316, 808
Csp6I	GTAC	2 cut(s)	217, 463
CspCI	CAANNNNNGTGG	2 cut(s)	379, 414
CspI	CGGWCCG	1 cut(s)	149
CviAII	CATG	9 cut(s)	88, 235, 340, 416, 715, 751, 823, 851, 952
CviQI	GTAC	2 cut(s)	217, 463
DdeI	CTNAG	3 cut(s)	640, 1021, 1099
DriI	GACNNNNNGTC	2 cut(s)	56, 155
Eam1105I	GACNNNNNGTC	2 cut(s)	56, 155
EciI	GGCGGA	1 cut(s)	17
Ecl136II	GAGCTC	1 cut(s)	110
Eco130I	CCWWGG	1 cut(s)	1048
Eco24I	GRGCYC	2 cut(s)	112, 474
Eco47I	GGWCC	2 cut(s)	149, 1045
Eco53kI	GAGCTC	1 cut(s)	110
Eco57I	CTGAAG	1 cut(s)	858
Eco88I	CYCGRG	2 cut(s)	466, 473
Eco91I	GGTNACC	3 cut(s)	79, 223, 773
EcoICRI	GAGCTC	1 cut(s)	110
EcoO109I	RGGNCCY	1 cut(s)	1045
EcoO65I	GGTNACC	3 cut(s)	79, 223, 773
EcoRII	CCWGG	3 cut(s)	490, 673, 826
EcoT14I	CCWWGG	1 cut(s)	1048
EcoT38I	GRGCYC	2 cut(s)	112, 474
ErhI	CCWWGG	1 cut(s)	1048
FaeI	CATG	9 cut(s)	91, 238, 343, 419, 718, 754, 826, 854, 955
FatI	CATG	9 cut(s)	87, 234, 339, 415, 714, 750, 822, 850, 951
FauI	CCCGC	1 cut(s)	290
FbaI	TGATCA	3 cut(s)	438, 516, 847
FblI	GTMKAC	2 cut(s)	204, 426
Fnu4HI	GCNGC	6 cut(s)	319, 322, 344, 712, 795, 1095
FriOI	GRGCYC	2 cut(s)	112, 474
Fsp4HI	GCNGC	6 cut(s)	319, 322, 344, 712, 795, 1095
FspBI	CTAG	2 cut(s)	546, 779
GlaI	GCGC	3 cut(s)	116, 118, 198
GluI	GCNGC	6 cut(s)	319, 322, 344, 712, 795, 1095
GsuI	CTGGAG	2 cut(s)	513, 828
HaeIII	GGCC	2 cut(s)	65, 733
HapII	CCGG	7 cut(s)	54, 99, 135, 200, 228, 248, 349
HgaI	GACGC	4 cut(s)	46, 313, 316, 808
HhaI	GCGC	3 cut(s)	117, 119, 199
Hin1I	GRCGYC	4 cut(s)	57, 308, 324, 819
Hin1II	CATG	9 cut(s)	91, 238, 343, 419, 718, 754, 826, 854, 955
Hin6I	GCGC	3 cut(s)	115, 117, 197
HinP1I	GCGC	3 cut(s)	115, 117, 197
HincII	GTYRAC	4 cut(s)	328, 382, 427, 703
HindII	GTYRAC	4 cut(s)	328, 382, 427, 703
HindIII	AAGCTT	1 cut(s)	620
HinfI	GANTC	6 cut(s)	124, 144, 263, 495, 644, 892
HpaII	CCGG	7 cut(s)	54, 99, 135, 200, 228, 248, 349
HphI	GGTGA	8 cut(s)	73, 190, 217, 268, 448, 526, 601, 766
Hpy166II	GTNNAC	6 cut(s)	205, 328, 382, 427, 601, 703
Hpy188I	TCNGA	4 cut(s)	149, 535, 897, 988
Hpy188III	TCNNGA	6 cut(s)	160, 211, 271, 359, 653, 1036
Hpy8I	GTNNAC	6 cut(s)	205, 328, 382, 427, 601, 703
Hpy99I	CGWCG	4 cut(s)	107, 143, 310, 428
HpyAV	CCTTC	3 cut(s)	580, 987, 991
HpyCH4IV	ACGT	1 cut(s)	423
HpyF3I	CTNAG	3 cut(s)	640, 1021, 1099
HpySE526I	ACGT	1 cut(s)	423
Hsp92I	GRCGYC	4 cut(s)	57, 308, 324, 819
Hsp92II	CATG	9 cut(s)	91, 238, 343, 419, 718, 754, 826, 854, 955
HspAI	GCGC	3 cut(s)	115, 117, 197
Ksp22I	TGATCA	3 cut(s)	438, 516, 847
LmnI	GCTCC	4 cut(s)	107, 115, 172, 351
Lsp1109I	GCAGC	3 cut(s)	355, 698, 1081
LweI	GCATC	2 cut(s)	180, 1072
MaeI	CTAG	2 cut(s)	546, 779
MaeII	ACGT	1 cut(s)	423
MaeIII	GTNAC	8 cut(s)	58, 79, 121, 157, 223, 589, 754, 773
MbiI	CCGCTC	1 cut(s)	154
MboII	GAAGA	2 cut(s)	21, 286
MflI	RGATCY	1 cut(s)	355
MhlI	GDGCHC	4 cut(s)	112, 474, 480, 603
MluCI	AATT	4 cut(s)	667, 696, 740, 971
MlyI	GAGTC	4 cut(s)	118, 272, 504, 653
MseI	TTAA	1 cut(s)	510
MslI	CAYNNNNRTG	2 cut(s)	86, 434
MspA1I	CMGCKG	1 cut(s)	797
MspCI	CTTAAG	1 cut(s)	509
MspI	CCGG	7 cut(s)	54, 99, 135, 200, 228, 248, 349
MspR9I	CCNGG	6 cut(s)	54, 99, 135, 492, 675, 828
MvaI	CCWGG	3 cut(s)	492, 675, 828
MvnI	CGCG	3 cut(s)	115, 117, 197
NciI	CCSGG	3 cut(s)	54, 99, 135
NlaIII	CATG	9 cut(s)	91, 238, 343, 419, 718, 754, 826, 854, 955
NlaIV	GGNNCC	1 cut(s)	246
NmeAIII	GCCGAG	1 cut(s)	264
NmuCI	GTSAC	7 cut(s)	58, 79, 121, 157, 223, 589, 754
NspI	RCATGY	4 cut(s)	91, 238, 343, 718
PaeI	GCATGC	1 cut(s)	718
PaeR7I	CTCGAG	1 cut(s)	473
PaqCI	CACCTGC	1 cut(s)	166
PauI	GCGCGC	1 cut(s)	115
PcsI	WCGNNNNNNNCGW	2 cut(s)	153, 216
PfeI	GAWTC	2 cut(s)	144, 892
PflFI	GACNNNGTC	1 cut(s)	422
PfoI	TCCNGGA	1 cut(s)	490
PkrI	GCNGC	6 cut(s)	320, 323, 345, 713, 796, 1096
Ple19I	CGATCG	1 cut(s)	77
PleI	GAGTC	4 cut(s)	118, 271, 503, 652
PpsI	GAGTC	4 cut(s)	118, 271, 503, 652
PpuMI	RGGWCCY	1 cut(s)	1045
Psp124BI	GAGCTC	1 cut(s)	112
Psp5II	RGGWCCY	1 cut(s)	1045
Psp6I	CCWGG	3 cut(s)	490, 673, 826
PspEI	GGTNACC	3 cut(s)	79, 223, 773
PspGI	CCWGG	3 cut(s)	490, 673, 826
PspN4I	GGNNCC	1 cut(s)	246
PspPI	GGNCC	4 cut(s)	64, 149, 732, 1045
PspPPI	RGGWCCY	1 cut(s)	1045
PspXI	VCTCGAGB	1 cut(s)	473
PstNI	CAGNNNCTG	1 cut(s)	797
PsuI	RGATCY	1 cut(s)	355
PsyI	GACNNNGTC	1 cut(s)	422
PteI	GCGCGC	1 cut(s)	115
PvuI	CGATCG	1 cut(s)	77
RsaI	GTAC	2 cut(s)	218, 464
RsaNI	GTAC	2 cut(s)	217, 463
RseI	CAYNNNNRTG	2 cut(s)	86, 434
Rsr2I	CGGWCCG	1 cut(s)	149
RsrII	CGGWCCG	1 cut(s)	149
SacI	GAGCTC	1 cut(s)	112
SalI	GTCGAC	1 cut(s)	425
SaqAI	TTAA	1 cut(s)	510
SatI	GCNGC	6 cut(s)	319, 322, 344, 712, 795, 1095
Sau96I	GGNCC	4 cut(s)	64, 149, 732, 1045
ScaI	AGTACT	1 cut(s)	464
SchI	GAGTC	4 cut(s)	118, 272, 504, 653
ScrFI	CCNGG	6 cut(s)	54, 99, 135, 492, 675, 828
SduI	GDGCHC	4 cut(s)	112, 474, 480, 603
SfaNI	GCATC	2 cut(s)	180, 1072
Sfr274I	CTCGAG	1 cut(s)	473
SgrAI	CRCCGGYG	1 cut(s)	227
SinI	GGWCC	2 cut(s)	149, 1045
SlaI	CTCGAG	1 cut(s)	473
SmiMI	CAYNNNNRTG	2 cut(s)	86, 434
SmlI	CTYRAG	2 cut(s)	473, 509
SmoI	CTYRAG	2 cut(s)	473, 509
SphI	GCATGC	1 cut(s)	718
Sse9I	AATT	4 cut(s)	667, 696, 740, 971
SsiI	CCGC	8 cut(s)	28, 113, 152, 297, 318, 321, 795, 1085
SspI	AATATT	1 cut(s)	903
SspMI	CTAG	2 cut(s)	546, 779
SstI	GAGCTC	1 cut(s)	112
StyD4I	CCNGG	6 cut(s)	52, 97, 133, 490, 673, 826
StyI	CCWWGG	1 cut(s)	1048
TaiI	ACGT	1 cut(s)	426
TaqI	TCGA	8 cut(s)	7, 210, 261, 266, 360, 426, 474, 991
TaqII	GACCGA	1 cut(s)	67
TasI	AATT	4 cut(s)	667, 696, 740, 971
TatI	WGTACW	1 cut(s)	462
TauI	GCSGC	3 cut(s)	321, 324, 797
TfiI	GAWTC	2 cut(s)	144, 892
Tru1I	TTAA	1 cut(s)	510
Tru9I	TTAA	1 cut(s)	510
TscAI	CASTG	1 cut(s)	820
TseFI	GTSAC	7 cut(s)	58, 79, 121, 157, 223, 589, 754
TseI	GCWGC	3 cut(s)	343, 711, 1094
Tsp45I	GTSAC	7 cut(s)	58, 79, 121, 157, 223, 589, 754
TspDTI	ATGAA	2 cut(s)	632, 705
TspGWI	ACGGA	2 cut(s)	120, 156
TspRI	CASTG	1 cut(s)	820
Tth111I	GACNNNGTC	1 cut(s)	422
Vha464I	CTTAAG	1 cut(s)	509
VneI	GTGCAC	1 cut(s)	599
VpaK11BI	GGWCC	2 cut(s)	149, 1045
XceI	RCATGY	4 cut(s)	91, 238, 343, 718
XhoI	CTCGAG	1 cut(s)	473
XmiI	GTMKAC	2 cut(s)	204, 426
XspI	CTAG	2 cut(s)	546, 779
ZrmI	AGTACT	1 cut(s)	464

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.