Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0001150

Physical Location & Seq

Genomic Coordinates Reverse (-)

5632334 .. 5635193

Gene Structure 2860 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g10321.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2217 bp

ATGGCTAGTGATCTTTCAGTTGAATTGTTAGAGATAGTTGGAAAGTGCCTCAACTTCACCAACGATGTTTCTCGATTCCGTGCTGTTTGTCAGTCATGGCGTTCCTCTGTTTCTCCCTTTACAAAAAGTAGGCAGCAGCTCCTTTCTCCCATCAGAGGTCCAATACAACTCCCCAAGCATTCTGATAGTAATGGAAACTGGCCTAAGATTATGACCCTCACCAAGGGGGTCATCTATCATGTTACCCACAGTTCAGGTACTTGGATTGTTACTGTCAAACTAAATGAATCAGATGAAATTGTTCGTAGGCTAGATCCACTGTTTCGATGCCCGTTCTCGTGTGAGCAGTTCCCTGAGACATTCCCAGAGGCATTGAACTTGTTGGATGAAGATGTTCGGGTAGTCGAATTGGCAGAAGCTTATAGTCTAAAAGATATCAGTGAGACTGGTCGTGATTATAGAGTGGCTGTGTCCTTCAATCCTAGTTGTCCTGTACTTATGGTCATTGTCAATGGAGTCTTATACTACTGTAACATAGGTGATGATCCCATTCCAATGTTAAAACCAGTGGAAGGTCTATCAGAATTCATCCGGCTGGAAGATGTTATTTACTATGAGGAAAAATTTTATGCTGTTTCCAGGGATGCGACCATACTAGTGCTGGATTCGTGTTCTTTGCAGGTGATGGATATACTTGTGAAGACTCGGATGTCAGGTCACAGGAAGTATTTGGTGGAATCAGCTGGAGAAATTTTTTTGGTTATTAAACAGATTCACCTTAACTACATAGTTTTCAAGTTGAATGTACTTGAGAAGTGCTGGGTTGAGATGGAGGACGGTTTCGATGGTCGAATATTGATAATAGATTCGGATGCAGGCTGCATCTTTCCTTCTGCTCAAGATTTCCCGGGAATTGAGCATGGGAACAATAGTTGCAGTTATTTCTATCATCCCAACTATACACACTGGGCAGAATCTCGCTTAGTTTATAAACCTAATGTATACAACAGGTTTATACCTAATTTTGTATGTCCTCCTTCATACCGAAACCCTAGGCATCAATCTTCACCAAGGCCACCAGGAATGGCGGATAGAGATCTCCCAGACGAGTTGATTGAGAGGATCAGAGAGCACCTTGACCTTAAAACCCGAATGCATGTTGCTCAGTTCCGTGCCGTCTCTCAATCATGGCGATCTTCTATTCCTTCATTCAATCCACTCGAGCCACCACCTCAAGATCACCCTCTAGATCTATTGCCCTCCACATTTGCCATATTCTTCCCCCTATCTGATTTTCCTTACACCATCCAGCGTAGCATAATCTATCATATTGCACCTTATCCTCCTCCTCATCACAAAGATGAAAGGAAACGAGGCTGGTTGATGCGAATGGATACAAACCAAAAGTTACTTCCTCCATTATCATGGCGTGATAGTGGTTTGGAAAAGCCAAAAAGGGTGATGATGAACTCAGTAGACTTTGGCGTACTAGAAGTGGCTAAACCCTATCTCTTAGTAAGTATGTACGACAACGACAAGTATCACAAGCTAGCTGTTTCCTTATATTTCGAGTTCTTCCCTGCAGTCATGTTGGTTACGTGTGGAGCTATATTCCTTGGAAAGTTGTCTTGTCAAGGTTCCATCGAACTCACTCGGGTAAATCCTGATGATAATCCCTCATGTAGAAATATAAGGAATGCGGAAAAGTATGATGATGTTATTTTCTATCGGGGGAAATTCTGTGTAGTGTCTAAGTCTGGGAAAGCTGCAGCGATGGATTCTTCTTTTAAGTGGGAAGTGATTGCTTCTCCAGTATCTACTTCAATGTTGTGGAAGAAGAAGTTCTTGGTTGAATCGCTCGGGGAGCTGCTTTTAGTTGAAAGACATGGGTCTACTTATGTTGCAAGTTGTTGTTCAGAGGAGGACATGCTCAGGAAGGAAATCAAGTTCAAGGTTTACAAGTTGGATGCATATAGGAAGCAATGGGTTGAGATGGAGGGTTCGGATTTGGATGGTCGAATATTGTGTGTGGGGGAAGATTGCTGCTTCTCAGTCTCCAGTAGAGACTTCCCAGGATGCCAAGGAAATTTTGTTTATTTTTCTTATGAAGTTTGGCGTGCTAAGACTATCTTTAGTAAAATTGGTGTGTTTCACTTGGATGATGGGAGTGCGTCACCACTGGAAGCCGGCGCTAAAATCTTTCTGCCACCCCCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0003676 GO:0003677 GO:0003678 GO:0003824 GO:0004003 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006281 GO:0006284 GO:0006302 GO:0006310 GO:0006464 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008026 GO:0008094 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009378 GO:0009987 GO:0016043 GO:0016462 GO:0016567 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0032392 GO:0032446 GO:0032508 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042623 GO:0043138 GO:0043140 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051276 GO:0051716 GO:0070035 GO:0070647 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0097159 GO:0140097 GO:1901360 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF295 F-box F-box-like

Protein Analysis

739

Amino Acids

84.42

Weight (kDa)

6.26

Isoelectric Point (pI)

44.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_KIB1-4	PF03478	81 - 307	4.4e-17	KIB1-4 beta-propeller
Beta-prop_KIB1-4	PF03478	553 - 717	2.1e-26	KIB1-4 beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001150)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g10320 FvH4_1g10321 FvH4_1g10850
malus_domestica	MD14G1159500.v1.1 MD15G1237600.v1.1
prunus_persica	Prupe.7G176500_v2.0.a1 Prupe.7G176700_v2.0.a1 Prupe.7G176800_v2.0.a1 Prupe.7G176900_v2.0.a1
pyrus_communis	pycom02g09650 pycom02g09800 pycom14g13320 pycom15g21130
rosa_chinensis	RchiOBHm_Chr2g0097161 RchiOBHm_Chr2g0097171 RchiOBHm_Chr2g0098141 RchiOBHm_Chr2g0099621
rosa_laevigata	RLG00000014898 RLG00000016709 RLG00000016710 RLG00000016759 RLG00000016765 RLG00000016898
rosa_multiflora	Rmu_co8490487.1_g000001 Rmu_sc0001182.1_g000008 Rmu_sc0001182.1_g000009 Rmu_sc0002880.1_g000006 Rmu_sc0005120.1_g000014
rosa_roxburghii	Rroxscaffold_2G00142910 Rroxscaffold_2G00144250 Rroxscaffold_2G00144300 Rroxscaffold_2G00144910 Rroxscaffold_2G00144920
rosa_rugosa	Rorug02G0064900.1 Rorug02G0065400 Rorug02G0070300 Rorug02G0070300 Rorug02G0070400 Rorug02G0081700
rosa_samantha	Rh1CG355800 Rh2AG111900 Rh2AG117600 Rh2AG117900 Rh2BG114000 Rh2BG114100 Rh2BG120500 Rh2BG134300 Rh2CG116200 Rh2CG135200 Rh2DG115200 Rh2DG115300 Rh2DG115400 Rh2DG122200 Rh2DG135700
rosa_wichuraiana	Rw2G008710 Rw2G009180 Rw2G009210 Rw2G010130

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
AarI	CACCTGC	1 cut(s)	670
AasI	GACNNNNNNGTC	1 cut(s)	709
Acc36I	ACCTGC	1 cut(s)	670
AccI	GTMKAC	3 cut(s)	1002, 1476, 1892
AciI	CCGC	2 cut(s)	1088, 1700
AclWI	GGATC	3 cut(s)	308, 539, 1130
AcsI	RAATTY	5 cut(s)	584, 623, 750, 1736, 2086
AfaI	GTAC	5 cut(s)	259, 495, 807, 1488, 1526
AfiI	CCNNNNNNNGG	3 cut(s)	155, 223, 572
AflIII	ACRYGT	1 cut(s)	1598
AhlI	ACTAGT	1 cut(s)	655
AjnI	CCWGG	3 cut(s)	638, 1078, 2071
AjuI	GAANNNNNNNTTGG	4 cut(s)	1395, 1427, 1829, 1861
AloI	GAACNNNNNNTCC	2 cut(s)	1931, 1963
AluBI	AGCT	8 cut(s)	139, 419, 743, 1549, 1553, 1607, 1766, 1867
AluI	AGCT	8 cut(s)	139, 419, 743, 1549, 1553, 1607, 1766, 1867
Alw21I	GWGCWC	1 cut(s)	1134
Alw26I	GTCTC	5 cut(s)	350, 437, 1183, 2058, 2059
AlwI	GGATC	3 cut(s)	308, 539, 1130
Ama87I	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
AoxI	GGCC	2 cut(s)	200, 1073
ApeKI	GCWGC	7 cut(s)	133, 136, 879, 1766, 1769, 1867, 2043
ApoI	RAATTY	5 cut(s)	584, 623, 750, 1736, 2086
Asp700I	GAANNNNTTC	3 cut(s)	300, 393, 1841
AspA2I	CCTAGG	1 cut(s)	1052
AspLEI	GCGC	1 cut(s)	2192
AspS9I	GGNCC	1 cut(s)	158
AsuC2I	CCSGG	2 cut(s)	908, 909
AsuHPI	GGTGA	9 cut(s)	49, 211, 551, 694, 767, 1059, 1232, 1471, 2166
AsuNHI	GCTAGC	1 cut(s)	1549
AvaI	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
AvaII	GGWCC	1 cut(s)	158
AvrII	CCTAGG	1 cut(s)	1052
BauI	CACGAG	1 cut(s)	337
BbsI	GAAGAC	1 cut(s)	707
Bbv12I	GWGCWC	1 cut(s)	1134
BbvI	GCAGC	7 cut(s)	145, 148, 866, 1753, 1781, 1854, 2030
BceAI	ACGGC	1 cut(s)	1160
BciT130I	CCWGG	3 cut(s)	640, 1080, 2073
BciVI	GTATCC	1 cut(s)	1387
BcnI	CCSGG	2 cut(s)	908, 909
BcoDI	GTCTC	5 cut(s)	350, 437, 1183, 2058, 2059
BcuI	ACTAGT	1 cut(s)	655
BfaI	CTAG	8 cut(s)	6, 311, 483, 656, 1053, 1247, 1490, 1550
BfmI	CTRYAG	2 cut(s)	1581, 1767
BfoI	RGCGCY	1 cut(s)	2193
BfuAI	ACCTGC	1 cut(s)	670
BfuI	GTATCC	1 cut(s)	1387
BglII	AGATCT	2 cut(s)	1096, 1249
BisI	GCNGC	7 cut(s)	134, 137, 880, 1767, 1770, 1868, 2044
BlnI	CCTAGG	1 cut(s)	1052
BlsI	GCNGC	7 cut(s)	135, 138, 881, 1768, 1771, 1869, 2045
Bme1390I	CCNGG	5 cut(s)	640, 908, 909, 1080, 2073
Bme18I	GGWCC	1 cut(s)	158
BmeT110I	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
BmgT120I	GGNCC	1 cut(s)	158
BmiI	GGNNCC	1 cut(s)	1639
BmrFI	CCNGG	5 cut(s)	640, 908, 909, 1080, 2073
BmrI	ACTGGG	1 cut(s)	976
BmsI	GCATC	8 cut(s)	317, 634, 862, 891, 1066, 1374, 1957, 2066
BmtI	GCTAGC	1 cut(s)	1553
BmuI	ACTGGG	1 cut(s)	976
BoxI	GACNNNNGTC	1 cut(s)	1888
BpiI	GAAGAC	1 cut(s)	707
BpmI	CTGGAG	3 cut(s)	765, 1794, 2041
Bpu10I	CCTNAGC	1 cut(s)	1931
BpuEI	CTTGAG	3 cut(s)	830, 882, 1218
BpuMI	CCSGG	2 cut(s)	908, 909
BsaAI	YACGTR	1 cut(s)	1599
BsaBI	GATNNNNATC	2 cut(s)	1095, 1671
BsaJI	CCNNGG	8 cut(s)	222, 639, 907, 1052, 1070, 1615, 2071, 2080
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 223, 572
Bse118I	RCCGGY	1 cut(s)	2186
Bse1I	ACTGG	7 cut(s)	203, 451, 566, 971, 1811, 2058, 2184
Bse3DI	GCAATG	1 cut(s)	1988
Bse8I	GATNNNNATC	2 cut(s)	1095, 1671
BseBI	CCWGG	3 cut(s)	640, 1080, 2073
BseDI	CCNNGG	8 cut(s)	222, 639, 907, 1052, 1070, 1615, 2071, 2080
BseJI	GATNNNNATC	2 cut(s)	1095, 1671
BseLI	CCNNNNNNNGG	3 cut(s)	155, 223, 572
BseMI	GCAATG	1 cut(s)	1988
BseMII	CTCAG	5 cut(s)	345, 1178, 1485, 1945, 2064
BseNI	ACTGG	7 cut(s)	203, 451, 566, 971, 1811, 2058, 2184
BseRI	GAGGAG	3 cut(s)	1335, 1338, 1934
BseXI	GCAGC	7 cut(s)	145, 148, 866, 1753, 1781, 1854, 2030
BseYI	CCCAGC	1 cut(s)	819
BshFI	GGCC	2 cut(s)	202, 1075
BsiHKAI	GWGCWC	1 cut(s)	1134
BsiHKCI	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
BsiSI	CCGG	3 cut(s)	592, 908, 2187
BslI	CCNNNNNNNGG	3 cut(s)	155, 223, 572
BsmAI	GTCTC	5 cut(s)	350, 437, 1183, 2058, 2059
BsmBI	CGTCTC	1 cut(s)	1183
BsmI	GAATGC	3 cut(s)	178, 1158, 1702
BsnI	GGCC	2 cut(s)	202, 1075
BsoBI	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
Bsp1286I	GDGCHC	1 cut(s)	1134
Bsp143I	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
BspACI	CCGC	2 cut(s)	1088, 1700
BspANI	GGCC	2 cut(s)	202, 1075
BspCNI	CTCAG	5 cut(s)	346, 1177, 1484, 1944, 2063
BspLI	GGNNCC	1 cut(s)	1639
BspMAI	CTGCAG	2 cut(s)	1585, 1771
BspMI	ACCTGC	1 cut(s)	670
BspOI	GCTAGC	1 cut(s)	1553
BspPI	GGATC	3 cut(s)	308, 539, 1130
BsrDI	GCAATG	1 cut(s)	1988
BsrFI	RCCGGY	1 cut(s)	2186
BsrI	ACTGG	7 cut(s)	203, 451, 566, 971, 1811, 2058, 2184
BssAI	RCCGGY	1 cut(s)	2186
BssECI	CCNNGG	8 cut(s)	222, 639, 907, 1052, 1070, 1615, 2071, 2080
BssMI	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
BssNAI	GTATAC	1 cut(s)	1003
BssSI	CACGAG	1 cut(s)	337
BssT1I	CCWWGG	5 cut(s)	222, 1052, 1070, 1615, 2080
Bst1107I	GTATAC	1 cut(s)	1003
Bst2BI	CACGAG	1 cut(s)	337
Bst2UI	CCWGG	3 cut(s)	640, 1080, 2073
Bst4CI	ACNGT	5 cut(s)	251, 274, 321, 530, 839
BstBAI	YACGTR	1 cut(s)	1599
BstC8I	GCNNGC	4 cut(s)	877, 1551, 2118, 2188
BstENI	CCTNNNNNAGG	1 cut(s)	221
BstH2I	RGCGCY	1 cut(s)	2193
BstHHI	GCGC	1 cut(s)	2192
BstKTI	GATC	8 cut(s)	13, 316, 547, 1099, 1125, 1196, 1240, 1252
BstMAI	GTCTC	5 cut(s)	350, 437, 1183, 2058, 2059
BstMBI	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
BstMWI	GCNNNNNNNGC	1 cut(s)	1864
BstNI	CCWGG	3 cut(s)	640, 1080, 2073
BstNSI	RCATGY	2 cut(s)	1160, 1930
BstPAI	GACNNNNGTC	1 cut(s)	1888
BstSCI	CCNGG	5 cut(s)	638, 906, 907, 1078, 2071
BstSFI	CTRYAG	2 cut(s)	1581, 1767
BstV1I	GCAGC	7 cut(s)	145, 148, 866, 1753, 1781, 1854, 2030
BstV2I	GAAGAC	1 cut(s)	707
BstX2I	RGATCY	3 cut(s)	313, 1096, 1249
BstXI	CCANNNNNNTGG	1 cut(s)	1425
BstYI	RGATCY	3 cut(s)	313, 1096, 1249
BstZ17I	GTATAC	1 cut(s)	1003
BsuI	GTATCC	1 cut(s)	1387
BsuRI	GGCC	2 cut(s)	202, 1075
BtgZI	GCGATG	1 cut(s)	1787
BtsIMutI	CAGTG	5 cut(s)	317, 445, 573, 964, 2177
BveI	ACCTGC	1 cut(s)	670
Cac8I	GCNNGC	4 cut(s)	877, 1551, 2118, 2188
CfoI	GCGC	1 cut(s)	2192
Cfr10I	RCCGGY	1 cut(s)	2186
Cfr13I	GGNCC	1 cut(s)	158
Cfr9I	CCCGGG	1 cut(s)	907
CseI	GACGC	1 cut(s)	2160
Csp6I	GTAC	5 cut(s)	258, 494, 806, 1487, 1525
CviQI	GTAC	5 cut(s)	258, 494, 806, 1487, 1525
DpnI	GATC	8 cut(s)	12, 315, 546, 1098, 1124, 1195, 1239, 1251
DpnII	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
DrdI	GACNNNNNNGTC	1 cut(s)	709
DseDI	GACNNNNNNGTC	1 cut(s)	709
EciI	GGCGGA	1 cut(s)	1103
Eco130I	CCWWGG	5 cut(s)	222, 1052, 1070, 1615, 2080
Eco32I	GATATC	1 cut(s)	436
Eco47I	GGWCC	1 cut(s)	158
Eco88I	CYCGRG	4 cut(s)	907, 1220, 1653, 1859
EcoNI	CCTNNNNNAGG	1 cut(s)	221
EcoRI	GAATTC	1 cut(s)	584
EcoRII	CCWGG	3 cut(s)	638, 1078, 2071
EcoRV	GATATC	1 cut(s)	436
EcoT14I	CCWWGG	5 cut(s)	222, 1052, 1070, 1615, 2080
EcoT22I	ATGCAT	2 cut(s)	1158, 1972
ErhI	CCWWGG	5 cut(s)	222, 1052, 1070, 1615, 2080
Esp3I	CGTCTC	1 cut(s)	1183
FalI	AAGNNNNNCTT	4 cut(s)	1829, 1861, 2114, 2146
FblI	GTMKAC	3 cut(s)	1002, 1476, 1892
Fnu4HI	GCNGC	7 cut(s)	134, 137, 880, 1767, 1770, 1868, 2044
Fsp4HI	GCNGC	7 cut(s)	134, 137, 880, 1767, 1770, 1868, 2044
FspBI	CTAG	8 cut(s)	6, 311, 483, 656, 1053, 1247, 1490, 1550
GlaI	GCGC	1 cut(s)	2191
GluI	GCNGC	7 cut(s)	134, 137, 880, 1767, 1770, 1868, 2044
GsaI	CCCAGC	1 cut(s)	823
GsuI	CTGGAG	3 cut(s)	765, 1794, 2041
HaeII	RGCGCY	1 cut(s)	2193
HaeIII	GGCC	2 cut(s)	202, 1075
HapII	CCGG	3 cut(s)	592, 908, 2187
HgaI	GACGC	1 cut(s)	2160
HhaI	GCGC	1 cut(s)	2192
Hin6I	GCGC	1 cut(s)	2190
HinP1I	GCGC	1 cut(s)	2190
HindIII	AAGCTT	1 cut(s)	417
HpaII	CCGG	3 cut(s)	592, 908, 2187
HphI	GGTGA	9 cut(s)	49, 211, 551, 694, 767, 1059, 1232, 1471, 2166
Hpy166II	GTNNAC	4 cut(s)	1003, 1477, 1893, 1957
Hpy188III	TCNNGA	7 cut(s)	72, 452, 899, 1235, 1247, 1664, 1933
Hpy8I	GTNNAC	4 cut(s)	1003, 1477, 1893, 1957
HpyAV	CCTTC	6 cut(s)	484, 566, 900, 1047, 1215, 1930
HpyCH4III	ACNGT	5 cut(s)	251, 274, 321, 530, 839
HpyCH4IV	ACGT	1 cut(s)	1598
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1864
HpySE526I	ACGT	1 cut(s)	1598
HspAI	GCGC	1 cut(s)	2190
KroI	GCCGGC	1 cut(s)	2186
KroNI	GCCGGC	1 cut(s)	2188
Kzo9I	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
LmnI	GCTCC	3 cut(s)	144, 1604, 1864
Lsp1109I	GCAGC	7 cut(s)	145, 148, 866, 1753, 1781, 1854, 2030
LweI	GCATC	8 cut(s)	317, 634, 862, 891, 1066, 1374, 1957, 2066
MaeI	CTAG	8 cut(s)	6, 311, 483, 656, 1053, 1247, 1490, 1550
MaeII	ACGT	1 cut(s)	1598
MaeIII	GTNAC	7 cut(s)	241, 268, 530, 716, 1407, 1594, 2172
MalI	GATC	8 cut(s)	12, 315, 546, 1098, 1124, 1195, 1239, 1251
MboI	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
MflI	RGATCY	3 cut(s)	313, 1096, 1249
MhlI	GDGCHC	1 cut(s)	1134
MlyI	GAGTC	2 cut(s)	525, 697
MmeI	TCCRAC	3 cut(s)	19, 363, 1944
Mph1103I	ATGCAT	2 cut(s)	1158, 1972
MroNI	GCCGGC	1 cut(s)	2186
MroXI	GAANNNNTTC	3 cut(s)	300, 393, 1841
MseI	TTAA	5 cut(s)	560, 765, 780, 1143, 1788
MslI	CAYNNNNRTG	5 cut(s)	554, 656, 1359, 1423, 2157
MspA1I	CMGCKG	1 cut(s)	743
MspI	CCGG	3 cut(s)	592, 908, 2187
MspR9I	CCNGG	5 cut(s)	640, 908, 909, 1080, 2073
Mva1269I	GAATGC	3 cut(s)	178, 1158, 1702
MvaI	CCWGG	3 cut(s)	640, 1080, 2073
MwoI	GCNNNNNNNGC	1 cut(s)	1864
NaeI	GCCGGC	1 cut(s)	2188
NciI	CCSGG	2 cut(s)	908, 909
NdeII	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
NgoMIV	GCCGGC	1 cut(s)	2186
NheI	GCTAGC	1 cut(s)	1549
NlaIV	GGNNCC	1 cut(s)	1639
NmuCI	GTSAC	2 cut(s)	716, 2172
NsiI	ATGCAT	2 cut(s)	1158, 1972
NspI	RCATGY	2 cut(s)	1160, 1930
PaeR7I	CTCGAG	1 cut(s)	1220
PaqCI	CACCTGC	1 cut(s)	670
PctI	GAATGC	3 cut(s)	178, 1158, 1702
PdiI	GCCGGC	1 cut(s)	2188
PdmI	GAANNNNTTC	3 cut(s)	300, 393, 1841
PfeI	GAWTC	9 cut(s)	75, 287, 665, 737, 772, 866, 974, 1778, 1853
PkrI	GCNGC	7 cut(s)	135, 138, 881, 1768, 1771, 1869, 2045
PleI	GAGTC	2 cut(s)	524, 697
PpsI	GAGTC	2 cut(s)	524, 697
Ppu21I	YACGTR	1 cut(s)	1599
PshAI	GACNNNNGTC	1 cut(s)	1888
PsiI	TTATAA	1 cut(s)	990
Psp6I	CCWGG	3 cut(s)	638, 1078, 2071
PspFI	CCCAGC	1 cut(s)	819
PspGI	CCWGG	3 cut(s)	638, 1078, 2071
PspN4I	GGNNCC	1 cut(s)	1639
PspPI	GGNCC	1 cut(s)	158
PspXI	VCTCGAGB	1 cut(s)	1220
PstI	CTGCAG	2 cut(s)	1585, 1771
PsuI	RGATCY	3 cut(s)	313, 1096, 1249
PvuII	CAGCTG	1 cut(s)	743
RsaI	GTAC	5 cut(s)	259, 495, 807, 1488, 1526
RsaNI	GTAC	5 cut(s)	258, 494, 806, 1487, 1525
RseI	CAYNNNNRTG	5 cut(s)	554, 656, 1359, 1423, 2157
SaqAI	TTAA	5 cut(s)	560, 765, 780, 1143, 1788
SatI	GCNGC	7 cut(s)	134, 137, 880, 1767, 1770, 1868, 2044
Sau3AI	GATC	8 cut(s)	10, 313, 544, 1096, 1122, 1193, 1237, 1249
Sau96I	GGNCC	1 cut(s)	158
SchI	GAGTC	2 cut(s)	525, 697
ScrFI	CCNGG	5 cut(s)	640, 908, 909, 1080, 2073
SduI	GDGCHC	1 cut(s)	1134
SfaNI	GCATC	8 cut(s)	317, 634, 862, 891, 1066, 1374, 1957, 2066
SfcI	CTRYAG	2 cut(s)	1581, 1767
Sfr274I	CTCGAG	1 cut(s)	1220
SinI	GGWCC	1 cut(s)	158
SlaI	CTCGAG	1 cut(s)	1220
SmaI	CCCGGG	1 cut(s)	909
SmiMI	CAYNNNNRTG	5 cut(s)	554, 656, 1359, 1423, 2157
SmlI	CTYRAG	4 cut(s)	809, 897, 1220, 1233
SmoI	CTYRAG	4 cut(s)	809, 897, 1220, 1233
SpeI	ACTAGT	1 cut(s)	655
SsiI	CCGC	2 cut(s)	1088, 1700
SspI	AATATT	2 cut(s)	855, 2022
SspMI	CTAG	8 cut(s)	6, 311, 483, 656, 1053, 1247, 1490, 1550
StyD4I	CCNGG	5 cut(s)	638, 906, 907, 1078, 2071
StyI	CCWWGG	5 cut(s)	222, 1052, 1070, 1615, 2080
TaaI	ACNGT	5 cut(s)	251, 274, 321, 530, 839
TaiI	ACGT	1 cut(s)	1601
TaqI	TCGA	9 cut(s)	73, 325, 405, 843, 850, 1221, 1569, 1644, 2017
TatI	WGTACW	2 cut(s)	493, 805
TfiI	GAWTC	9 cut(s)	75, 287, 665, 737, 772, 866, 974, 1778, 1853
Tru1I	TTAA	5 cut(s)	560, 765, 780, 1143, 1788
Tru9I	TTAA	5 cut(s)	560, 765, 780, 1143, 1788
TscAI	CASTG	5 cut(s)	324, 445, 573, 971, 2184
TseFI	GTSAC	2 cut(s)	716, 2172
TseI	GCWGC	7 cut(s)	133, 136, 879, 1766, 1769, 1867, 2043
Tsp45I	GTSAC	2 cut(s)	716, 2172
TspDTI	ATGAA	9 cut(s)	300, 309, 402, 577, 1029, 1197, 1377, 1481, 2121
TspGWI	ACGGA	2 cut(s)	68, 1160
TspMI	CCCGGG	1 cut(s)	907
TspRI	CASTG	5 cut(s)	324, 445, 573, 971, 2184
VpaK11BI	GGWCC	1 cut(s)	158
XagI	CCTNNNNNAGG	1 cut(s)	221
XapI	RAATTY	5 cut(s)	584, 623, 750, 1736, 2086
XbaI	TCTAGA	1 cut(s)	1246
XceI	RCATGY	2 cut(s)	1160, 1930
XcmI	CCANNNNNNNNNTGG	1 cut(s)	658
XhoI	CTCGAG	1 cut(s)	1220
XmaI	CCCGGG	1 cut(s)	907
XmaJI	CCTAGG	1 cut(s)	1052
XmiI	GTMKAC	3 cut(s)	1002, 1476, 1892
XmnI	GAANNNNTTC	3 cut(s)	300, 393, 1841
XspI	CTAG	8 cut(s)	6, 311, 483, 656, 1053, 1247, 1490, 1550
Zsp2I	ATGCAT	2 cut(s)	1158, 1972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.