f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 113 - 377 | 3.7e-25 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 219 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1203 |
| AccII | CGCG | 2 cut(s) | 105, 323 |
| AciI | CCGC | 6 cut(s) | 130, 167, 184, 321, 323, 427 |
| AclI | AACGTT | 1 cut(s) | 611 |
| AclWI | GGATC | 1 cut(s) | 593 |
| AcoI | YGGCCR | 1 cut(s) | 555 |
| AcsI | RAATTY | 1 cut(s) | 479 |
| AfaI | GTAC | 6 cut(s) | 27, 56, 376, 521, 683, 1130 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1203 |
| AflIII | ACRYGT | 2 cut(s) | 678, 1107 |
| AgsI | TTSAA | 9 cut(s) | 205, 469, 494, 550, 568, 667, 695, 1060, 1180 |
| AjiI | CACGTC | 1 cut(s) | 679 |
| AjnI | CCWGG | 2 cut(s) | 685, 1202 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 821, 853 |
| AluBI | AGCT | 6 cut(s) | 628, 749, 807, 859, 922, 1134 |
| AluI | AGCT | 6 cut(s) | 628, 749, 807, 859, 922, 1134 |
| Alw26I | GTCTC | 1 cut(s) | 1156 |
| AlwI | GGATC | 1 cut(s) | 593 |
| Ama87I | CYCGRG | 2 cut(s) | 1020, 1030 |
| AoxI | GGCC | 2 cut(s) | 555, 1144 |
| ApeKI | GCWGC | 3 cut(s) | 442, 859, 1002 |
| ApoI | RAATTY | 1 cut(s) | 479 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 890, 922 |
| AspLEI | GCGC | 1 cut(s) | 299 |
| AspS9I | GGNCC | 2 cut(s) | 186, 332 |
| AsuC2I | CCSGG | 3 cut(s) | 337, 1031, 1032 |
| AsuHPI | GGTGA | 1 cut(s) | 647 |
| AvaI | CYCGRG | 2 cut(s) | 1020, 1030 |
| AvaII | GGWCC | 2 cut(s) | 186, 332 |
| BbvI | GCAGC | 3 cut(s) | 454, 846, 989 |
| BccI | CCATC | 3 cut(s) | 248, 323, 734 |
| BceAI | ACGGC | 5 cut(s) | 542, 798, 877, 1015, 1131 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 563, 597 |
| BciT130I | CCWGG | 2 cut(s) | 687, 1204 |
| BciVI | GTATCC | 1 cut(s) | 571 |
| BclI | TGATCA | 2 cut(s) | 379, 541 |
| BcnI | CCSGG | 3 cut(s) | 337, 1031, 1032 |
| BcoDI | GTCTC | 1 cut(s) | 1156 |
| BfaI | CTAG | 4 cut(s) | 15, 156, 515, 629 |
| BfmI | CTRYAG | 1 cut(s) | 750 |
| BfuAI | ACCTGC | 1 cut(s) | 219 |
| BfuI | GTATCC | 1 cut(s) | 571 |
| BisI | GCNGC | 3 cut(s) | 443, 860, 1003 |
| BlsI | GCNGC | 3 cut(s) | 444, 861, 1004 |
| Bme1390I | CCNGG | 5 cut(s) | 337, 687, 1031, 1032, 1204 |
| Bme18I | GGWCC | 2 cut(s) | 186, 332 |
| BmeT110I | CYCGRG | 2 cut(s) | 1020, 1030 |
| BmgBI | CACGTC | 1 cut(s) | 679 |
| BmgT120I | GGNCC | 2 cut(s) | 186, 332 |
| BmiI | GGNNCC | 1 cut(s) | 334 |
| BmrFI | CCNGG | 5 cut(s) | 337, 687, 1031, 1032, 1204 |
| BmsI | GCATC | 3 cut(s) | 424, 522, 660 |
| BpmI | CTGGAG | 1 cut(s) | 200 |
| Bpu10I | CCTNAGC | 1 cut(s) | 960 |
| BpuMI | CCSGG | 3 cut(s) | 337, 1031, 1032 |
| BsaJI | CCNNGG | 4 cut(s) | 321, 335, 685, 1030 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1203 |
| Bse1I | ACTGG | 1 cut(s) | 217 |
| Bse3DI | GCAATG | 1 cut(s) | 1099 |
| BseBI | CCWGG | 2 cut(s) | 687, 1204 |
| BseDI | CCNNGG | 4 cut(s) | 321, 335, 685, 1030 |
| BseGI | GGATG | 4 cut(s) | 259, 331, 415, 976 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1203 |
| BseMI | GCAATG | 1 cut(s) | 1099 |
| BseMII | CTCAG | 2 cut(s) | 240, 974 |
| BseNI | ACTGG | 1 cut(s) | 217 |
| BseXI | GCAGC | 3 cut(s) | 454, 846, 989 |
| BsgI | GTGCAG | 1 cut(s) | 108 |
| Bsh1236I | CGCG | 2 cut(s) | 105, 323 |
| BshFI | GGCC | 2 cut(s) | 557, 1146 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1020, 1030 |
| BsiSI | CCGG | 2 cut(s) | 337, 1031 |
| BslFI | GGGAC | 1 cut(s) | 318 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1203 |
| BsmAI | GTCTC | 1 cut(s) | 1156 |
| BsmFI | GGGAC | 1 cut(s) | 318 |
| BsnI | GGCC | 2 cut(s) | 557, 1146 |
| BsoBI | CYCGRG | 2 cut(s) | 1020, 1030 |
| Bsp1407I | TGTACA | 1 cut(s) | 1128 |
| Bsp143I | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| BspACI | CCGC | 6 cut(s) | 130, 167, 184, 321, 323, 427 |
| BspANI | GGCC | 2 cut(s) | 557, 1146 |
| BspCNI | CTCAG | 2 cut(s) | 239, 973 |
| BspFNI | CGCG | 2 cut(s) | 105, 323 |
| BspHI | TCATGA | 1 cut(s) | 526 |
| BspLI | GGNNCC | 1 cut(s) | 334 |
| BspMI | ACCTGC | 1 cut(s) | 219 |
| BspPI | GGATC | 1 cut(s) | 593 |
| BspQI | GCTCTTC | 1 cut(s) | 1074 |
| BsrDI | GCAATG | 1 cut(s) | 1099 |
| BsrGI | TGTACA | 1 cut(s) | 1128 |
| BsrI | ACTGG | 1 cut(s) | 217 |
| BssECI | CCNNGG | 4 cut(s) | 321, 335, 685, 1030 |
| BssMI | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| Bst2UI | CCWGG | 2 cut(s) | 687, 1204 |
| Bst4CI | ACNGT | 1 cut(s) | 111 |
| Bst6I | CTCTTC | 1 cut(s) | 1074 |
| BstAUI | TGTACA | 1 cut(s) | 1128 |
| BstC8I | GCNNGC | 1 cut(s) | 890 |
| BstDEI | CTNAG | 2 cut(s) | 226, 960 |
| BstDSI | CCRYGG | 1 cut(s) | 321 |
| BstF5I | GGATG | 4 cut(s) | 259, 331, 415, 976 |
| BstFNI | CGCG | 2 cut(s) | 105, 323 |
| BstHHI | GCGC | 1 cut(s) | 299 |
| BstKTI | GATC | 5 cut(s) | 382, 526, 544, 601, 976 |
| BstMAI | GTCTC | 1 cut(s) | 1156 |
| BstMBI | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 86, 239, 320, 590 |
| BstNI | CCWGG | 2 cut(s) | 687, 1204 |
| BstNSI | RCATGY | 2 cut(s) | 412, 1111 |
| BstSCI | CCNGG | 5 cut(s) | 335, 685, 1029, 1030, 1202 |
| BstSFI | CTRYAG | 1 cut(s) | 750 |
| BstUI | CGCG | 2 cut(s) | 105, 323 |
| BstV1I | GCAGC | 3 cut(s) | 454, 846, 989 |
| BsuI | GTATCC | 1 cut(s) | 571 |
| BsuRI | GGCC | 2 cut(s) | 557, 1146 |
| BtgI | CCRYGG | 1 cut(s) | 321 |
| BtgZI | GCGATG | 1 cut(s) | 389 |
| BtrI | CACGTC | 1 cut(s) | 679 |
| BtsCI | GGATG | 4 cut(s) | 259, 331, 415, 976 |
| BtsI | GCAGTG | 2 cut(s) | 947, 1131 |
| BtsIMutI | CAGTG | 2 cut(s) | 947, 1131 |
| BveI | ACCTGC | 1 cut(s) | 219 |
| Cac8I | GCNNGC | 1 cut(s) | 890 |
| CciI | TCATGA | 1 cut(s) | 526 |
| CfoI | GCGC | 1 cut(s) | 299 |
| Cfr13I | GGNCC | 2 cut(s) | 186, 332 |
| Cfr42I | CCGCGG | 1 cut(s) | 324 |
| Cfr9I | CCCGGG | 1 cut(s) | 1030 |
| CseI | GACGC | 1 cut(s) | 935 |
| Csp6I | GTAC | 6 cut(s) | 26, 55, 375, 520, 682, 1129 |
| CviAII | CATG | 5 cut(s) | 76, 180, 409, 527, 1108 |
| CviQI | GTAC | 6 cut(s) | 26, 55, 375, 520, 682, 1129 |
| DdeI | CTNAG | 2 cut(s) | 226, 960 |
| DpnI | GATC | 5 cut(s) | 381, 525, 543, 600, 975 |
| DpnII | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| EaeI | YGGCCR | 1 cut(s) | 555 |
| Eam1104I | CTCTTC | 1 cut(s) | 1074 |
| EarI | CTCTTC | 1 cut(s) | 1074 |
| Eco47I | GGWCC | 2 cut(s) | 186, 332 |
| Eco88I | CYCGRG | 2 cut(s) | 1020, 1030 |
| EcoRII | CCWGG | 2 cut(s) | 685, 1202 |
| FaeI | CATG | 5 cut(s) | 79, 183, 412, 530, 1111 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1053, 1085 |
| FaqI | GGGAC | 1 cut(s) | 318 |
| FatI | CATG | 5 cut(s) | 75, 179, 408, 526, 1107 |
| FauI | CCCGC | 2 cut(s) | 328, 434 |
| FbaI | TGATCA | 2 cut(s) | 379, 541 |
| Fnu4HI | GCNGC | 3 cut(s) | 443, 860, 1003 |
| FokI | GGATG | 4 cut(s) | 266, 338, 402, 983 |
| Fsp4HI | GCNGC | 3 cut(s) | 443, 860, 1003 |
| FspBI | CTAG | 4 cut(s) | 15, 156, 515, 629 |
| GlaI | GCGC | 1 cut(s) | 298 |
| GluI | GCNGC | 3 cut(s) | 443, 860, 1003 |
| GsuI | CTGGAG | 1 cut(s) | 200 |
| HaeIII | GGCC | 2 cut(s) | 557, 1146 |
| HapII | CCGG | 2 cut(s) | 337, 1031 |
| HgaI | GACGC | 1 cut(s) | 935 |
| HhaI | GCGC | 1 cut(s) | 299 |
| Hin1II | CATG | 5 cut(s) | 79, 183, 412, 530, 1111 |
| Hin6I | GCGC | 1 cut(s) | 297 |
| HinP1I | GCGC | 1 cut(s) | 297 |
| HinfI | GANTC | 7 cut(s) | 18, 159, 568, 761, 845, 1035, 1139 |
| HpaII | CCGG | 2 cut(s) | 337, 1031 |
| HphI | GGTGA | 1 cut(s) | 647 |
| Hpy166II | GTNNAC | 5 cut(s) | 392, 520, 682, 1129, 1193 |
| Hpy188I | TCNGA | 8 cut(s) | 40, 125, 229, 248, 608, 771, 898, 992 |
| Hpy8I | GTNNAC | 5 cut(s) | 392, 520, 682, 1129, 1193 |
| Hpy99I | CGWCG | 4 cut(s) | 55, 293, 680, 898 |
| HpyAV | CCTTC | 3 cut(s) | 211, 544, 711 |
| HpyCH4III | ACNGT | 1 cut(s) | 111 |
| HpyCH4IV | ACGT | 4 cut(s) | 53, 360, 611, 678 |
| HpyCH4V | TGCA | 6 cut(s) | 89, 242, 415, 651, 1092, 1124 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 86, 239, 320, 590 |
| HpyF3I | CTNAG | 2 cut(s) | 226, 960 |
| HpySE526I | ACGT | 4 cut(s) | 53, 360, 611, 678 |
| Hsp92II | CATG | 5 cut(s) | 79, 183, 412, 530, 1111 |
| HspAI | GCGC | 1 cut(s) | 297 |
| Ksp22I | TGATCA | 2 cut(s) | 379, 541 |
| KspI | CCGCGG | 1 cut(s) | 324 |
| Kzo9I | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| LguI | GCTCTTC | 1 cut(s) | 1074 |
| LmnI | GCTCC | 1 cut(s) | 219 |
| Lsp1109I | GCAGC | 3 cut(s) | 454, 846, 989 |
| LweI | GCATC | 3 cut(s) | 424, 522, 660 |
| MaeI | CTAG | 4 cut(s) | 15, 156, 515, 629 |
| MaeII | ACGT | 4 cut(s) | 53, 360, 611, 678 |
| MaeIII | GTNAC | 3 cut(s) | 219, 815, 1082 |
| MalI | GATC | 5 cut(s) | 381, 525, 543, 600, 975 |
| MboI | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| MboII | GAAGA | 3 cut(s) | 841, 844, 1061 |
| MluCI | AATT | 2 cut(s) | 479, 1119 |
| MlyI | GAGTC | 3 cut(s) | 12, 854, 1044 |
| MmeI | TCCRAC | 4 cut(s) | 226, 651, 876, 1080 |
| MseI | TTAA | 3 cut(s) | 357, 918, 948 |
| MspA1I | CMGCKG | 1 cut(s) | 323 |
| MspI | CCGG | 2 cut(s) | 337, 1031 |
| MspR9I | CCNGG | 5 cut(s) | 337, 687, 1031, 1032, 1204 |
| MvaI | CCWGG | 2 cut(s) | 687, 1204 |
| MvnI | CGCG | 2 cut(s) | 105, 323 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 86, 239, 320, 590 |
| NciI | CCSGG | 3 cut(s) | 337, 1031, 1032 |
| NdeII | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| NlaIII | CATG | 5 cut(s) | 79, 183, 412, 530, 1111 |
| NlaIV | GGNNCC | 1 cut(s) | 334 |
| NmuCI | GTSAC | 1 cut(s) | 815 |
| NspI | RCATGY | 2 cut(s) | 412, 1111 |
| PaeR7I | CTCGAG | 1 cut(s) | 1020 |
| PagI | TCATGA | 1 cut(s) | 526 |
| PciI | ACATGT | 1 cut(s) | 1107 |
| PciSI | GCTCTTC | 1 cut(s) | 1074 |
| PfeI | GAWTC | 4 cut(s) | 159, 568, 761, 1139 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1203 |
| PkrI | GCNGC | 3 cut(s) | 444, 861, 1004 |
| PleI | GAGTC | 3 cut(s) | 12, 853, 1043 |
| PpsI | GAGTC | 3 cut(s) | 12, 853, 1043 |
| PscI | ACATGT | 1 cut(s) | 1107 |
| Psp1406I | AACGTT | 1 cut(s) | 611 |
| Psp6I | CCWGG | 2 cut(s) | 685, 1202 |
| PspGI | CCWGG | 2 cut(s) | 685, 1202 |
| PspN4I | GGNNCC | 1 cut(s) | 334 |
| PspPI | GGNCC | 2 cut(s) | 186, 332 |
| RsaI | GTAC | 6 cut(s) | 27, 56, 376, 521, 683, 1130 |
| RsaNI | GTAC | 6 cut(s) | 26, 55, 375, 520, 682, 1129 |
| SacII | CCGCGG | 1 cut(s) | 324 |
| SapI | GCTCTTC | 1 cut(s) | 1074 |
| SaqAI | TTAA | 3 cut(s) | 357, 918, 948 |
| SatI | GCNGC | 3 cut(s) | 443, 860, 1003 |
| Sau3AI | GATC | 5 cut(s) | 379, 523, 541, 598, 973 |
| Sau96I | GGNCC | 2 cut(s) | 186, 332 |
| SchI | GAGTC | 3 cut(s) | 12, 854, 1044 |
| ScrFI | CCNGG | 5 cut(s) | 337, 687, 1031, 1032, 1204 |
| SfaNI | GCATC | 3 cut(s) | 424, 522, 660 |
| SfcI | CTRYAG | 1 cut(s) | 750 |
| Sfr274I | CTCGAG | 1 cut(s) | 1020 |
| Sfr303I | CCGCGG | 1 cut(s) | 324 |
| SgrBI | CCGCGG | 1 cut(s) | 324 |
| SinI | GGWCC | 2 cut(s) | 186, 332 |
| SlaI | CTCGAG | 1 cut(s) | 1020 |
| SmaI | CCCGGG | 1 cut(s) | 1032 |
| SmlI | CTYRAG | 1 cut(s) | 1020 |
| SmoI | CTYRAG | 1 cut(s) | 1020 |
| Sse9I | AATT | 2 cut(s) | 479, 1119 |
| SsiI | CCGC | 6 cut(s) | 130, 167, 184, 321, 323, 427 |
| SspI | AATATT | 1 cut(s) | 981 |
| SspMI | CTAG | 4 cut(s) | 15, 156, 515, 629 |
| StyD4I | CCNGG | 5 cut(s) | 335, 685, 1029, 1030, 1202 |
| TaaI | ACNGT | 1 cut(s) | 111 |
| TaiI | ACGT | 4 cut(s) | 56, 363, 614, 681 |
| TaqI | TCGA | 7 cut(s) | 291, 573, 870, 909, 976, 1021, 1038 |
| TasI | AATT | 2 cut(s) | 479, 1119 |
| TatI | WGTACW | 1 cut(s) | 1128 |
| TfiI | GAWTC | 4 cut(s) | 159, 568, 761, 1139 |
| Tru1I | TTAA | 3 cut(s) | 357, 918, 948 |
| Tru9I | TTAA | 3 cut(s) | 357, 918, 948 |
| TscAI | CASTG | 2 cut(s) | 947, 1131 |
| TseFI | GTSAC | 1 cut(s) | 815 |
| TseI | GCWGC | 3 cut(s) | 442, 859, 1002 |
| Tsp45I | GTSAC | 1 cut(s) | 815 |
| TspDTI | ATGAA | 1 cut(s) | 1061 |
| TspGWI | ACGGA | 3 cut(s) | 152, 636, 791 |
| TspMI | CCCGGG | 1 cut(s) | 1030 |
| TspRI | CASTG | 2 cut(s) | 947, 1131 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1203 |
| VpaK11BI | GGWCC | 2 cut(s) | 186, 332 |
| XapI | RAATTY | 1 cut(s) | 479 |
| XbaI | TCTAGA | 1 cut(s) | 155 |
| XceI | RCATGY | 2 cut(s) | 412, 1111 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1200 |
| XhoI | CTCGAG | 1 cut(s) | 1020 |
| XmaI | CCCGGG | 1 cut(s) | 1030 |
| XspI | CTAG | 4 cut(s) | 15, 156, 515, 629 |