pycom14g13320

f-box protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
16262833 .. 16264281
1449 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom14g13320.2

Sequence Viewer

Length: 1401 bp
ATGCATATGGCGAGTGGTTCCGGTAATATCCCAGACGATCTGTTAGAGAACATCAGAAACCGCCTCAACACCAAAACCGACGTTTCTAGATTCCGCGCAGTCTGTAAGTTGTGGCGGTCCTCGATTCCTTCCTTCGAGAAGAACCTGCTCCAATTGCCCTCGGAAGTGAACATTGCAGACCCAGACAGCGGCTATGATATTTGCGGATATAGCTTTACCCTCGTCGAGAGTGTAGTCTATCATCTCGCACCTCCCAACGATGATGATCCCCAGAAAAGAGGTTGGTTGATTAATGTCAAACAAGTAGGTCTTGATCAAAAGGGTGAACAACACACTCATCACATGTTGCATCCGCTCTCCCGCTTATTTCGAGGGCAGCCCAAGTCCTTCCCCAAGGTATTCAACTTTATGGAATCTCGGGTATTTGAAGTGGCAATAATGTATAGTCTAGTAGAATATGGTGGGGAGATGCGTGGTGATTTTAAGGTGGCTGCATCCTTGAATCTTGATTTCCCTGCTTTCATGGCAATTGATCTATTCGGAACGTTGTACTACGGAGAGCTAGGTGCTGACGTTGTAGATTGCACCAACTTCCTTCTGAAGTTGGATGACGAATACCGCGATTTTCAAGACGTTATTTTCTTCAAAGGAAGGTTTTGTGCCGTGTGTCGTGACGGGAGAGCAGTGGCGGTTGATTCTTGTCTGAATACGGAAATGATTGCATCTCCATTACCGAATATCGCTTGCCTTGACCACGAGAAGAAGAAGAAGTTGGTGGAGTCGTTGGGAGAGCTGCTTTTAGTTGATATGTATTTGAAGGGAAATCCGTCAGACTATACATTCGAGATTTTTTACGCTCAAGCTCACGAGAAGCAATGGGTTAAGCTAGAGGCGCAAGCTCTGGATGATCGAATATTGGTGCTAGGGGATGACGGCTGCTTCTCTCTTTCTTGGTTTCAGGGAGGAAGTGGGCTTCATTCAATGGAATGCCTTGTTGGTTTAGCGAAAAAGGTAGTTTACTTGCTTAGTGCTTGCGCTAAGGGCTTATACCCAAAAAGTATGACACACACTATATGTAATGGGACGGACGGGATGAAAGATTTCCCTGGAGTGGAAGGGAGATGTATTTATTTCCACGAGCCTCATCATAGCAAGAGTTACGAGTTCCATCGGTTAAGAAGCATATTAAGCGATATTGCAGTGTACAGCTTGGATTCTGGCCGTGTCTCGCGGTTAGCAGATTTTCCGAGTTCGAACATCATCTTTTGCCCACCCCCAACCTGGACGTGGCCTAATATGCCAGAGTTGTCTTGCAGACGTGATCAAGGGGAAGACTCCGGATCAAGGGCGAGGAGGAGGAGGAAGATCAAGGCCGTCGTGAGATGCCGCAATGGGCGTTGA

Protein Analysis

467

Amino Acids

52.75

Weight (kDa)

6.54

Isoelectric Point (pI)

42.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 153
AccBSI CCGCTC 1 cut(s) 355
AccII CGCG 3 cut(s) 96, 621, 1231
AccIII TCCGGA 1 cut(s) 1337
AclI AACGTT 1 cut(s) 545
AclWI GGATC 2 cut(s) 260, 1348
AcoI YGGCCR 1 cut(s) 1219
AcuI CTGAAG 1 cut(s) 620
AfaI GTAC 2 cut(s) 551, 1205
AfiI CCNNNNNNNGG 5 cut(s) 188, 1111, 1281, 1287, 1344
AflIII ACRYGT 1 cut(s) 342
AgsI TTSAA 7 cut(s) 403, 428, 502, 629, 646, 817, 981
AjiI CACGTC 2 cut(s) 1287, 1319
AjnI CCWGG 2 cut(s) 1105, 1280
AjuI GAANNNNNNNTTGG 4 cut(s) 755, 787, 978, 1010
AluBI AGCT 7 cut(s) 213, 562, 793, 863, 886, 899, 1209
AluI AGCT 7 cut(s) 213, 562, 793, 863, 886, 899, 1209
Alw26I GTCTC 1 cut(s) 1231
AlwI GGATC 2 cut(s) 260, 1348
Ama87I CYCGRG 1 cut(s) 417
Aor13HI TCCGGA 1 cut(s) 1337
AoxI GGCC 3 cut(s) 1219, 1289, 1371
ApeKI GCWGC 4 cut(s) 376, 491, 793, 936
ArsI GACNNNNNNTTYG 2 cut(s) 824, 856
AseI ATTAAT 1 cut(s) 291
Asp700I GAANNNNTTC 1 cut(s) 1100
AspLEI GCGC 3 cut(s) 98, 895, 1037
AspS9I GGNCC 1 cut(s) 117
AsuHPI GGTGA 2 cut(s) 335, 488
AsuII TTCGAA 1 cut(s) 1253
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 1 cut(s) 117
BauI CACGAG 3 cut(s) 755, 866, 1136
BbsI GAAGAC 1 cut(s) 1338
BbvI GCAGC 4 cut(s) 388, 478, 780, 923
BccI CCATC 1 cut(s) 1176
BceAI ACGGC 4 cut(s) 647, 949, 1206, 1358
BciT130I CCWGG 2 cut(s) 1107, 1282
BclI TGATCA 2 cut(s) 313, 1321
BcoDI GTCTC 1 cut(s) 1231
BfaI CTAG 5 cut(s) 87, 449, 563, 887, 923
BfuAI ACCTGC 1 cut(s) 153
BisI GCNGC 6 cut(s) 190, 377, 492, 794, 937, 1387
BlsI GCNGC 6 cut(s) 191, 378, 493, 795, 938, 1388
Bme1390I CCNGG 2 cut(s) 1107, 1282
Bme18I GGWCC 1 cut(s) 117
BmeT110I CYCGRG 1 cut(s) 417
BmgBI CACGTC 2 cut(s) 1287, 1319
BmgT120I GGNCC 1 cut(s) 117
BmiI GGNNCC 1 cut(s) 19
BmrFI CCNGG 2 cut(s) 1107, 1282
BmsI GCATC 5 cut(s) 358, 459, 503, 731, 1373
BpiI GAAGAC 1 cut(s) 1338
BpmI CTGGAG 1 cut(s) 1128
Bpu10I CCTNAGC 1 cut(s) 1038
Bpu14I TTCGAA 1 cut(s) 1253
BpuEI CTTGAG 1 cut(s) 843
BsaBI GATNNNNATC 1 cut(s) 264
BsaJI CCNNGG 3 cut(s) 159, 393, 1105
BsaWI WCCGGW 2 cut(s) 20, 1337
Bsc4I CCNNNNNNNGG 5 cut(s) 188, 1111, 1281, 1287, 1344
Bse3DI GCAATG 3 cut(s) 171, 881, 1396
Bse8I GATNNNNATC 1 cut(s) 264
BseAI TCCGGA 1 cut(s) 1337
BseBI CCWGG 2 cut(s) 1107, 1282
BseDI CCNNGG 3 cut(s) 159, 393, 1105
BseGI GGATG 6 cut(s) 349, 494, 613, 910, 934, 1098
BseJI GATNNNNATC 1 cut(s) 264
BseLI CCNNNNNNNGG 5 cut(s) 188, 1111, 1281, 1287, 1344
BseMI GCAATG 3 cut(s) 171, 881, 1396
BseRI GAGGAG 3 cut(s) 1366, 1369, 1372
BseXI GCAGC 4 cut(s) 388, 478, 780, 923
Bsh1236I CGCG 3 cut(s) 96, 621, 1231
BshFI GGCC 3 cut(s) 1221, 1291, 1373
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 2 cut(s) 21, 1338
BslFI GGGAC 1 cut(s) 1096
BslI CCNNNNNNNGG 5 cut(s) 188, 1111, 1281, 1287, 1344
BsmAI GTCTC 1 cut(s) 1231
BsmFI GGGAC 1 cut(s) 1096
BsmI GAATGC 1 cut(s) 992
BsnI GGCC 3 cut(s) 1221, 1291, 1373
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 1 cut(s) 1253
Bsp13I TCCGGA 1 cut(s) 1337
Bsp1407I TGTACA 1 cut(s) 1203
Bsp143I GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
BspANI GGCC 3 cut(s) 1221, 1291, 1373
BspEI TCCGGA 1 cut(s) 1337
BspFNI CGCG 3 cut(s) 96, 621, 1231
BspLI GGNNCC 1 cut(s) 19
BspMI ACCTGC 1 cut(s) 153
BspPI GGATC 2 cut(s) 260, 1348
BspT104I TTCGAA 1 cut(s) 1253
BsrBI CCGCTC 1 cut(s) 355
BsrDI GCAATG 3 cut(s) 171, 881, 1396
BsrGI TGTACA 1 cut(s) 1203
BssECI CCNNGG 3 cut(s) 159, 393, 1105
BssMI GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
BssSI CACGAG 3 cut(s) 755, 866, 1136
BssT1I CCWWGG 1 cut(s) 393
Bst2BI CACGAG 3 cut(s) 755, 866, 1136
Bst2UI CCWGG 2 cut(s) 1107, 1282
BstAUI TGTACA 1 cut(s) 1203
BstBI TTCGAA 1 cut(s) 1253
BstC8I GCNNGC 3 cut(s) 745, 897, 1033
BstDEI CTNAG 2 cut(s) 1025, 1038
BstF5I GGATG 6 cut(s) 349, 494, 613, 910, 934, 1098
BstFNI CGCG 3 cut(s) 96, 621, 1231
BstHHI GCGC 3 cut(s) 98, 895, 1037
BstKTI GATC 8 cut(s) 40, 268, 316, 535, 910, 1324, 1343, 1368
BstMAI GTCTC 1 cut(s) 1231
BstMBI GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
BstMWI GCNNNNNNNGC 7 cut(s) 154, 210, 524, 892, 1041, 1188, 1297
BstNI CCWGG 2 cut(s) 1107, 1282
BstNSI RCATGY 1 cut(s) 346
BstSCI CCNGG 2 cut(s) 1105, 1280
BstUI CGCG 3 cut(s) 96, 621, 1231
BstV1I GCAGC 4 cut(s) 388, 478, 780, 923
BstV2I GAAGAC 1 cut(s) 1338
BsuRI GGCC 3 cut(s) 1221, 1291, 1373
BtrI CACGTC 2 cut(s) 1287, 1319
BtsCI GGATG 6 cut(s) 349, 494, 613, 910, 934, 1098
BtsI GCAGTG 2 cut(s) 690, 1206
BtsIMutI CAGTG 2 cut(s) 690, 1206
BveI ACCTGC 1 cut(s) 153
Cac8I GCNNGC 3 cut(s) 745, 897, 1033
CfoI GCGC 3 cut(s) 98, 895, 1037
Cfr13I GGNCC 1 cut(s) 117
Csp6I GTAC 2 cut(s) 550, 1204
CviAII CATG 2 cut(s) 343, 523
CviQI GTAC 2 cut(s) 550, 1204
DdeI CTNAG 2 cut(s) 1025, 1038
DpnI GATC 8 cut(s) 39, 267, 315, 534, 909, 1323, 1342, 1367
DpnII GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
EaeI YGGCCR 1 cut(s) 1219
Eco130I CCWWGG 1 cut(s) 393
Eco47I GGWCC 1 cut(s) 117
Eco57I CTGAAG 1 cut(s) 620
Eco88I CYCGRG 1 cut(s) 417
EcoRII CCWGG 2 cut(s) 1105, 1280
EcoT14I CCWWGG 1 cut(s) 393
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 393
FaeI CATG 2 cut(s) 346, 526
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FaqI GGGAC 1 cut(s) 1096
FatI CATG 2 cut(s) 342, 522
FauI CCCGC 1 cut(s) 368
FauNDI CATATG 1 cut(s) 6
FbaI TGATCA 2 cut(s) 313, 1321
Fnu4HI GCNGC 6 cut(s) 190, 377, 492, 794, 937, 1387
FokI GGATG 6 cut(s) 336, 481, 620, 917, 941, 1105
Fsp4HI GCNGC 6 cut(s) 190, 377, 492, 794, 937, 1387
FspBI CTAG 5 cut(s) 87, 449, 563, 887, 923
GlaI GCGC 3 cut(s) 97, 894, 1036
GluI GCNGC 6 cut(s) 190, 377, 492, 794, 937, 1387
GsuI CTGGAG 1 cut(s) 1128
HaeIII GGCC 3 cut(s) 1221, 1291, 1373
HapII CCGG 2 cut(s) 21, 1338
HhaI GCGC 3 cut(s) 98, 895, 1037
Hin1II CATG 2 cut(s) 346, 526
Hin6I GCGC 3 cut(s) 96, 893, 1035
HinP1I GCGC 3 cut(s) 96, 893, 1035
HinfI GANTC 8 cut(s) 90, 124, 413, 502, 695, 779, 1214, 1334
HpaII CCGG 2 cut(s) 21, 1338
HphI GGTGA 2 cut(s) 335, 488
Hpy166II GTNNAC 4 cut(s) 169, 326, 1018, 1204
Hpy188I TCNGA 7 cut(s) 56, 163, 542, 600, 705, 832, 1248
Hpy8I GTNNAC 4 cut(s) 169, 326, 1018, 1204
Hpy99I CGWCG 3 cut(s) 83, 227, 1379
HpyAV CCTTC 7 cut(s) 138, 142, 397, 605, 645, 811, 1109
HpyCH4IV ACGT 6 cut(s) 81, 545, 573, 633, 1286, 1318
HpyCH4V TGCA 8 cut(s) 4, 176, 349, 494, 585, 722, 1199, 1314
HpyF10VI GCNNNNNNNGC 7 cut(s) 154, 210, 524, 892, 1041, 1188, 1297
HpyF3I CTNAG 2 cut(s) 1025, 1038
HpySE526I ACGT 6 cut(s) 81, 545, 573, 633, 1286, 1318
Hsp92II CATG 2 cut(s) 346, 526
HspAI GCGC 3 cut(s) 96, 893, 1035
Kpn2I TCCGGA 1 cut(s) 1337
Ksp22I TGATCA 2 cut(s) 313, 1321
Kzo9I GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
LmnI GCTCC 1 cut(s) 153
Lsp1109I GCAGC 4 cut(s) 388, 478, 780, 923
LweI GCATC 5 cut(s) 358, 459, 503, 731, 1373
MaeI CTAG 5 cut(s) 87, 449, 563, 887, 923
MaeII ACGT 6 cut(s) 81, 545, 573, 633, 1286, 1318
MaeIII GTNAC 2 cut(s) 671, 1157
MalI GATC 8 cut(s) 39, 267, 315, 534, 909, 1323, 1342, 1367
MbiI CCGCTC 1 cut(s) 355
MboI GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
MboII GAAGA 7 cut(s) 151, 634, 772, 775, 778, 1343, 1375
MfeI CAATTG 2 cut(s) 152, 528
MluCI AATT 2 cut(s) 152, 528
MlyI GAGTC 2 cut(s) 788, 1328
MmeI TCCRAC 1 cut(s) 585
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1337
MroXI GAANNNNTTC 1 cut(s) 1100
MseI TTAA 5 cut(s) 291, 483, 882, 1175, 1187
MspA1I CMGCKG 1 cut(s) 189
MspI CCGG 2 cut(s) 21, 1338
MspR9I CCNGG 2 cut(s) 1107, 1282
MunI CAATTG 2 cut(s) 152, 528
Mva1269I GAATGC 1 cut(s) 992
MvaI CCWGG 2 cut(s) 1107, 1282
MvnI CGCG 3 cut(s) 96, 621, 1231
MwoI GCNNNNNNNGC 7 cut(s) 154, 210, 524, 892, 1041, 1188, 1297
NdeI CATATG 1 cut(s) 6
NdeII GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
NlaIII CATG 2 cut(s) 346, 526
NlaIV GGNNCC 1 cut(s) 19
NmuCI GTSAC 1 cut(s) 671
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 346
NspV TTCGAA 1 cut(s) 1253
PciI ACATGT 1 cut(s) 342
PcsI WCGNNNNNNNCGW 1 cut(s) 618
PctI GAATGC 1 cut(s) 992
PdmI GAANNNNTTC 1 cut(s) 1100
PfeI GAWTC 6 cut(s) 90, 124, 413, 502, 695, 1214
PkrI GCNGC 6 cut(s) 191, 378, 493, 795, 938, 1388
PleI GAGTC 2 cut(s) 787, 1328
PpsI GAGTC 2 cut(s) 787, 1328
PscI ACATGT 1 cut(s) 342
PshBI ATTAAT 1 cut(s) 291
Psp1406I AACGTT 1 cut(s) 545
Psp6I CCWGG 2 cut(s) 1105, 1280
PspGI CCWGG 2 cut(s) 1105, 1280
PspN4I GGNNCC 1 cut(s) 19
PspPI GGNCC 1 cut(s) 117
RsaI GTAC 2 cut(s) 551, 1205
RsaNI GTAC 2 cut(s) 550, 1204
SaqAI TTAA 5 cut(s) 291, 483, 882, 1175, 1187
SatI GCNGC 6 cut(s) 190, 377, 492, 794, 937, 1387
Sau3AI GATC 8 cut(s) 37, 265, 313, 532, 907, 1321, 1340, 1365
Sau96I GGNCC 1 cut(s) 117
SchI GAGTC 2 cut(s) 788, 1328
ScrFI CCNGG 2 cut(s) 1107, 1282
SfaNI GCATC 5 cut(s) 358, 459, 503, 731, 1373
SfuI TTCGAA 1 cut(s) 1253
SinI GGWCC 1 cut(s) 117
SmlI CTYRAG 1 cut(s) 858
SmoI CTYRAG 1 cut(s) 858
Sse9I AATT 2 cut(s) 152, 528
SspI AATATT 1 cut(s) 915
SspMI CTAG 5 cut(s) 87, 449, 563, 887, 923
StyD4I CCNGG 2 cut(s) 1105, 1280
StyI CCWWGG 1 cut(s) 393
TaiI ACGT 6 cut(s) 84, 548, 576, 636, 1289, 1321
TaqI TCGA 7 cut(s) 122, 135, 225, 370, 843, 910, 1253
TasI AATT 2 cut(s) 152, 528
TatI WGTACW 2 cut(s) 549, 1203
TauI GCSGC 2 cut(s) 192, 1389
TfiI GAWTC 6 cut(s) 90, 124, 413, 502, 695, 1214
Tru1I TTAA 5 cut(s) 291, 483, 882, 1175, 1187
Tru9I TTAA 5 cut(s) 291, 483, 882, 1175, 1187
TscAI CASTG 2 cut(s) 690, 1206
TseFI GTSAC 1 cut(s) 671
TseI GCWGC 4 cut(s) 376, 491, 793, 936
Tsp45I GTSAC 1 cut(s) 671
TspDTI ATGAA 3 cut(s) 511, 965, 1109
TspGWI ACGGA 4 cut(s) 570, 725, 816, 1100
TspRI CASTG 2 cut(s) 690, 1206
VpaK11BI GGWCC 1 cut(s) 117
VspI ATTAAT 1 cut(s) 291
XbaI TCTAGA 1 cut(s) 86
XceI RCATGY 1 cut(s) 346
XcmI CCANNNNNNNNNTGG 2 cut(s) 1278, 1284
XmnI GAANNNNTTC 1 cut(s) 1100
XspI CTAG 5 cut(s) 87, 449, 563, 887, 923
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.