Prupe.7G176800_v2.0.a1

f-box protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
17518173 .. 17519983
1811 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G176800.1

Sequence Viewer

Length: 1458 bp
ATGGCGAGCACTATACCAGATGATATATTAGTGAGAATTGGTAAGCGTCTCAACACAAAAACTGGTGTTTCTCGATTTCGAGCGGTCTGTAAGTCATGGCGGTCCTCTCTTCCTCCCTTTGCAAAACAGCTTCCTCTGCAATTCCCCATCCAAGTTGTTGCTAAGAGAACCAGCTTCACCCTCACCGAGAGCGTACTCTATCATCTTGCACCTCCCGCCGGCGATCCCTGCGAAAGGGGTTGGTTGATTTATGTCAGAGAAGGAGAATGGGGAAAAACTCATCATATGCTGCATCCACTCTCCCAATTTATCATAAGGAAGTTGCCCGACGCATATCCAAAGTTAATCAACTTATTGGAATATCGGGTATTTGAGGTGGCCAAAGTATACGGCCTACGTTTACGGGATCGATGGTTTGGTAATAGGGTGGCCATGTCCTTAAATCTCGATTTCCCTTCGGTCATGATGGTGAGAATGAGAAGATTATGGTATGGGAAATTAGGCGTTGACAGTAAAAAGTGCATCGAAGTCTCTCGGTTGGGTTGTGAACACTCGTTTTATGAAGATGTCATTTTTTATCAAGGAAAGTTCTATGCTGTCTGCCGGAATGGAACAGCCGTAGTGGTTGATTCTTCTCTTGATGTGACGGTGATCGCGTCTCGAATAGACGGTGTTTTTGGCCTTAATCCCAAGAAGTATTTGGTGGAGTCATCCGGGGAGTTGCTTTTGGTTCATAGATATTGGGATACAGACCAATCCCCTTCTTCTGGTTCATCATCTGAAGATTCTGATTCTTCATCAGAAGATTCTGATTCTTCATCAGAAGATTCTGATTCTTCATCAGAAGATTCTGATTTTTCATCAGATTCAGAAGATTTTGATTCTTTTGATGAAGATTCTTCTAAGAAGCTTTCGTGGGCGAAAGTAGATCCAAGTACTCTTGTGGCCAGAGAAATACTTCGTCAAAGGGCGGCAGCACGGAACCCCGTTCATGGTGAAGATTCTTCTGATTCTGACTATGCAGACAAGCCTCCCATGACTACTGACCTTATTAAATTCAAGGTTTTCAAGTTGGATGCAGAAGGGAAACAATGGGTTGAGGCTGAGGCGGAAGCTTTGCGTGATCGAATATTGGTGGCGGGGCACAACCGCTGCTTGTCTGTTTCTACTGGAGATTTCCCAGGGTGCAGGGGGAGCTGCATTTATTTCTATGATCATTATAATCGCACAAACGCGTTAGGAAGAGGAAGCATGTTGAGCCAAACTGGAGTGTTCTGCTTAGATTCTGGCACTTGCTTACCGCTAACAGATTGTCCAAATTTTCACAACATCTTTTGCCCACCCCCAACTTGGACTTGGTTGCCAAGCCAACAACAAAGGAAAAGGAAACAAGAAGACTTGGATTTGGACATGAATTTGGAAGAAGGGAAAAGAAAGAAACAAAAGAAAAGGACTTGA

Protein Analysis

486

Amino Acids

54.95

Weight (kDa)

6.58

Isoelectric Point (pI)

55.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1221
AccBSI CCGCTC 1 cut(s) 83
AccI GTMKAC 1 cut(s) 387
AccII CGCG 2 cut(s) 656, 1235
AciI CCGC 8 cut(s) 83, 100, 216, 971, 1109, 1139, 1150, 1301
AclWI GGATC 3 cut(s) 218, 414, 923
AcoI YGGCCR 3 cut(s) 378, 429, 945
AcsI RAATTY 3 cut(s) 1055, 1318, 1414
AcuI CTGAAG 1 cut(s) 801
AfaI GTAC 2 cut(s) 195, 937
AfiI CCNNNNNNNGG 5 cut(s) 218, 234, 767, 992, 1350
AflIII ACRYGT 1 cut(s) 1233
AgsI TTSAA 2 cut(s) 1060, 1069
AjnI CCWGG 1 cut(s) 1180
AluBI AGCT 5 cut(s) 130, 174, 910, 1115, 1197
AluI AGCT 5 cut(s) 130, 174, 910, 1115, 1197
Alw21I GWGCWC 1 cut(s) 11
Alw26I GTCTC 3 cut(s) 53, 535, 663
AlwI GGATC 3 cut(s) 218, 414, 923
AoxI GGCC 5 cut(s) 378, 391, 429, 679, 945
ApeKI GCWGC 4 cut(s) 289, 974, 1152, 1197
ApoI RAATTY 3 cut(s) 1055, 1318, 1414
ArsI GACNNNNNNTTYG 2 cut(s) 659, 691
Asp700I GAANNNNTTC 1 cut(s) 957
AspS9I GGNCC 1 cut(s) 102
AsuC2I CCSGG 1 cut(s) 715
AsuHPI GGTGA 5 cut(s) 169, 175, 481, 661, 1007
AvaII GGWCC 1 cut(s) 102
BaeGI GKGCMC 1 cut(s) 1146
BalI TGGCCA 3 cut(s) 380, 431, 947
BbsI GAAGAC 1 cut(s) 1401
Bbv12I GWGCWC 1 cut(s) 11
BbvCI CCTCAGC 1 cut(s) 1104
BbvI GCAGC 4 cut(s) 276, 986, 1139, 1184
BccI CCATC 3 cut(s) 155, 405, 460
BceAI ACGGC 2 cut(s) 406, 602
BciT130I CCWGG 1 cut(s) 1182
BciVI GTATCC 1 cut(s) 739
BclI TGATCA 1 cut(s) 1213
BcnI CCSGG 1 cut(s) 715
BcoDI GTCTC 3 cut(s) 53, 535, 663
BfuI GTATCC 1 cut(s) 739
BisI GCNGC 5 cut(s) 290, 972, 975, 1153, 1198
BlsI GCNGC 5 cut(s) 291, 973, 976, 1154, 1199
BmcAI AGTACT 1 cut(s) 937
Bme1390I CCNGG 2 cut(s) 715, 1182
Bme18I GGWCC 1 cut(s) 102
BmgT120I GGNCC 1 cut(s) 102
BmiI GGNNCC 1 cut(s) 983
BmrFI CCNGG 2 cut(s) 715, 1182
BmsI GCATC 3 cut(s) 301, 531, 1066
BpiI GAAGAC 1 cut(s) 1401
BpmI CTGGAG 2 cut(s) 1191, 1287
Bpu10I CCTNAGC 1 cut(s) 1104
BpuMI CCSGG 1 cut(s) 715
Bsa29I ATCGAT 1 cut(s) 409
BsaJI CCNNGG 3 cut(s) 714, 1180, 1181
Bsc4I CCNNNNNNNGG 5 cut(s) 218, 234, 767, 992, 1350
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 3 cut(s) 67, 1174, 1270
BseBI CCWGG 1 cut(s) 1182
BseCI ATCGAT 1 cut(s) 409
BseDI CCNNGG 3 cut(s) 714, 1180, 1181
BseGI GGATG 4 cut(s) 147, 292, 710, 1081
BseLI CCNNNNNNNGG 5 cut(s) 218, 234, 767, 992, 1350
BseMII CTCAG 1 cut(s) 1095
BseNI ACTGG 3 cut(s) 67, 1174, 1270
BseSI GKGCMC 1 cut(s) 1146
BseXI GCAGC 4 cut(s) 276, 986, 1139, 1184
BsgI GTGCAG 1 cut(s) 1207
Bsh1236I CGCG 2 cut(s) 656, 1235
BshFI GGCC 5 cut(s) 380, 393, 431, 681, 947
BshVI ATCGAT 1 cut(s) 409
BsiHKAI GWGCWC 1 cut(s) 11
BsiSI CCGG 3 cut(s) 219, 604, 714
BslI CCNNNNNNNGG 5 cut(s) 218, 234, 767, 992, 1350
BsmAI GTCTC 3 cut(s) 53, 535, 663
BsmBI CGTCTC 2 cut(s) 53, 663
BsnI GGCC 5 cut(s) 380, 393, 431, 681, 947
Bsp1286I GDGCHC 2 cut(s) 11, 1146
Bsp143I GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
BspACI CCGC 8 cut(s) 83, 100, 216, 971, 1109, 1139, 1150, 1301
BspANI GGCC 5 cut(s) 380, 393, 431, 681, 947
BspCNI CTCAG 1 cut(s) 1096
BspDI ATCGAT 1 cut(s) 409
BspFNI CGCG 2 cut(s) 656, 1235
BspHI TCATGA 1 cut(s) 462
BspLI GGNNCC 1 cut(s) 983
BspPI GGATC 3 cut(s) 218, 414, 923
BsrBI CCGCTC 1 cut(s) 83
BsrFI RCCGGY 1 cut(s) 218
BsrI ACTGG 3 cut(s) 67, 1174, 1270
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 3 cut(s) 714, 1180, 1181
BssMI GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
BssNAI GTATAC 1 cut(s) 388
Bst1107I GTATAC 1 cut(s) 388
Bst2UI CCWGG 1 cut(s) 1182
Bst4CI ACNGT 3 cut(s) 512, 649, 671
Bst6I CTCTTC 2 cut(s) 114, 1237
BstC8I GCNNGC 2 cut(s) 7, 220
BstDEI CTNAG 4 cut(s) 162, 903, 1104, 1279
BstENI CCTNNNNNAGG 1 cut(s) 232
BstF5I GGATG 4 cut(s) 147, 292, 710, 1081
BstFNI CGCG 2 cut(s) 656, 1235
BstKTI GATC 6 cut(s) 226, 409, 654, 931, 1126, 1216
BstMAI GTCTC 3 cut(s) 53, 535, 663
BstMBI GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
BstMWI GCNNNNNNNGC 5 cut(s) 136, 215, 228, 1194, 1257
BstNI CCWGG 1 cut(s) 1182
BstNSI RCATGY 1 cut(s) 1255
BstSCI CCNGG 2 cut(s) 713, 1180
BstSLI GKGCMC 1 cut(s) 1146
BstUI CGCG 2 cut(s) 656, 1235
BstV1I GCAGC 4 cut(s) 276, 986, 1139, 1184
BstV2I GAAGAC 1 cut(s) 1401
BstX2I RGATCY 1 cut(s) 928
BstYI RGATCY 1 cut(s) 928
BstZ17I GTATAC 1 cut(s) 388
Bsu15I ATCGAT 1 cut(s) 409
BsuI GTATCC 1 cut(s) 739
BsuRI GGCC 5 cut(s) 380, 393, 431, 681, 947
BsuTUI ATCGAT 1 cut(s) 409
BtsCI GGATG 4 cut(s) 147, 292, 710, 1081
Cac8I GCNNGC 2 cut(s) 7, 220
CciI TCATGA 1 cut(s) 462
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 102
ClaI ATCGAT 1 cut(s) 409
CseI GACGC 3 cut(s) 35, 338, 645
Csp6I GTAC 2 cut(s) 194, 936
CviAII CATG 7 cut(s) 96, 433, 463, 992, 1036, 1252, 1411
CviQI GTAC 2 cut(s) 194, 936
DdeI CTNAG 4 cut(s) 162, 903, 1104, 1279
DpnI GATC 6 cut(s) 225, 408, 653, 930, 1125, 1215
DpnII GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
EaeI YGGCCR 3 cut(s) 378, 429, 945
Eam1104I CTCTTC 2 cut(s) 114, 1237
EarI CTCTTC 2 cut(s) 114, 1237
EciI GGCGGA 1 cut(s) 1124
Eco47I GGWCC 1 cut(s) 102
Eco57I CTGAAG 1 cut(s) 801
EcoNI CCTNNNNNAGG 1 cut(s) 232
EcoRII CCWGG 1 cut(s) 1180
Esp3I CGTCTC 2 cut(s) 53, 663
FaeI CATG 7 cut(s) 99, 436, 466, 995, 1039, 1255, 1414
FatI CATG 7 cut(s) 95, 432, 462, 991, 1035, 1251, 1410
FauI CCCGC 2 cut(s) 223, 1132
FauNDI CATATG 1 cut(s) 285
FbaI TGATCA 1 cut(s) 1213
FblI GTMKAC 1 cut(s) 387
Fnu4HI GCNGC 5 cut(s) 290, 972, 975, 1153, 1198
FokI GGATG 4 cut(s) 134, 279, 697, 1088
Fsp4HI GCNGC 5 cut(s) 290, 972, 975, 1153, 1198
GluI GCNGC 5 cut(s) 290, 972, 975, 1153, 1198
GsuI CTGGAG 2 cut(s) 1191, 1287
HaeIII GGCC 5 cut(s) 380, 393, 431, 681, 947
HapII CCGG 3 cut(s) 219, 604, 714
HgaI GACGC 3 cut(s) 35, 338, 645
Hin1II CATG 7 cut(s) 99, 436, 466, 995, 1039, 1255, 1414
HincII GTYRAC 1 cut(s) 508
HindII GTYRAC 1 cut(s) 508
HindIII AAGCTT 2 cut(s) 908, 1113
HpaII CCGG 3 cut(s) 219, 604, 714
HphI GGTGA 5 cut(s) 169, 175, 481, 661, 1007
Hpy166II GTNNAC 4 cut(s) 388, 401, 508, 548
Hpy188III TCNNGA 5 cut(s) 72, 446, 463, 638, 660
Hpy8I GTNNAC 4 cut(s) 388, 401, 508, 548
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 5 cut(s) 254, 465, 771, 1076, 1418
HpyCH4III ACNGT 3 cut(s) 512, 649, 671
HpyCH4IV ACGT 1 cut(s) 397
HpyCH4V TGCA 9 cut(s) 122, 139, 209, 292, 522, 1022, 1079, 1188, 1200
HpyF10VI GCNNNNNNNGC 5 cut(s) 136, 215, 228, 1194, 1257
HpyF3I CTNAG 4 cut(s) 162, 903, 1104, 1279
HpySE526I ACGT 1 cut(s) 397
Hsp92II CATG 7 cut(s) 99, 436, 466, 995, 1039, 1255, 1414
KroI GCCGGC 1 cut(s) 218
KroNI GCCGGC 1 cut(s) 220
Ksp22I TGATCA 1 cut(s) 1213
Kzo9I GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
LmnI GCTCC 1 cut(s) 1194
Lsp1109I GCAGC 4 cut(s) 276, 986, 1139, 1184
LweI GCATC 3 cut(s) 301, 531, 1066
MaeII ACGT 1 cut(s) 397
MaeIII GTNAC 1 cut(s) 643
MalI GATC 6 cut(s) 225, 408, 653, 930, 1125, 1215
MbiI CCGCTC 1 cut(s) 83
MboI GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 2 cut(s) 11, 1146
MlsI TGGCCA 3 cut(s) 380, 431, 947
MluCI AATT 7 cut(s) 36, 140, 305, 497, 1055, 1318, 1414
MluI ACGCGT 1 cut(s) 1233
MluNI TGGCCA 3 cut(s) 380, 431, 947
MlyI GAGTC 1 cut(s) 716
MmeI TCCRAC 1 cut(s) 1053
Mox20I TGGCCA 3 cut(s) 380, 431, 947
MreI CGCCGGCG 1 cut(s) 218
MroNI GCCGGC 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 957
MscI TGGCCA 3 cut(s) 380, 431, 947
MseI TTAA 4 cut(s) 344, 440, 684, 1053
MslI CAYNNNNRTG 1 cut(s) 467
Msp20I TGGCCA 3 cut(s) 380, 431, 947
MspA1I CMGCKG 1 cut(s) 1152
MspI CCGG 3 cut(s) 219, 604, 714
MspR9I CCNGG 2 cut(s) 715, 1182
MvaI CCWGG 1 cut(s) 1182
MvnI CGCG 2 cut(s) 656, 1235
MwoI GCNNNNNNNGC 5 cut(s) 136, 215, 228, 1194, 1257
NaeI GCCGGC 1 cut(s) 220
NciI CCSGG 1 cut(s) 715
NdeI CATATG 1 cut(s) 285
NdeII GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
NgoMIV GCCGGC 1 cut(s) 218
NlaIII CATG 7 cut(s) 99, 436, 466, 995, 1039, 1255, 1414
NlaIV GGNNCC 1 cut(s) 983
NmuCI GTSAC 1 cut(s) 643
NspI RCATGY 1 cut(s) 1255
PagI TCATGA 1 cut(s) 462
PasI CCCWGGG 1 cut(s) 1181
PcsI WCGNNNNNNNCGW 1 cut(s) 653
PdiI GCCGGC 1 cut(s) 220
PdmI GAANNNNTTC 1 cut(s) 957
PkrI GCNGC 5 cut(s) 291, 973, 976, 1154, 1199
PleI GAGTC 1 cut(s) 715
PpsI GAGTC 1 cut(s) 715
PsiI TTATAA 1 cut(s) 1221
Psp6I CCWGG 1 cut(s) 1180
PspGI CCWGG 1 cut(s) 1180
PspN4I GGNNCC 1 cut(s) 983
PspPI GGNCC 1 cut(s) 102
PsuI RGATCY 1 cut(s) 928
RsaI GTAC 2 cut(s) 195, 937
RsaNI GTAC 2 cut(s) 194, 936
RseI CAYNNNNRTG 1 cut(s) 467
SaqAI TTAA 4 cut(s) 344, 440, 684, 1053
SatI GCNGC 5 cut(s) 290, 972, 975, 1153, 1198
Sau3AI GATC 6 cut(s) 223, 406, 651, 928, 1123, 1213
Sau96I GGNCC 1 cut(s) 102
ScaI AGTACT 1 cut(s) 937
SchI GAGTC 1 cut(s) 716
ScrFI CCNGG 2 cut(s) 715, 1182
SduI GDGCHC 2 cut(s) 11, 1146
SfaNI GCATC 3 cut(s) 301, 531, 1066
SgrAI CRCCGGYG 1 cut(s) 218
SinI GGWCC 1 cut(s) 102
SmiMI CAYNNNNRTG 1 cut(s) 467
Sse9I AATT 7 cut(s) 36, 140, 305, 497, 1055, 1318, 1414
SsiI CCGC 8 cut(s) 83, 100, 216, 971, 1109, 1139, 1150, 1301
SspI AATATT 1 cut(s) 1131
StyD4I CCNGG 2 cut(s) 713, 1180
TaaI ACNGT 3 cut(s) 512, 649, 671
TaiI ACGT 1 cut(s) 400
TaqI TCGA 7 cut(s) 73, 79, 409, 447, 525, 661, 1126
TaqII GACCGA 1 cut(s) 448
TasI AATT 7 cut(s) 36, 140, 305, 497, 1055, 1318, 1414
TatI WGTACW 1 cut(s) 935
TauI GCSGC 1 cut(s) 974
Tru1I TTAA 4 cut(s) 344, 440, 684, 1053
Tru9I TTAA 4 cut(s) 344, 440, 684, 1053
TseFI GTSAC 1 cut(s) 643
TseI GCWGC 4 cut(s) 289, 974, 1152, 1197
Tsp45I GTSAC 1 cut(s) 643
TspGWI ACGGA 1 cut(s) 994
VpaK11BI GGWCC 1 cut(s) 102
XagI CCTNNNNNAGG 1 cut(s) 232
XapI RAATTY 3 cut(s) 1055, 1318, 1414
XceI RCATGY 1 cut(s) 1255
XcmI CCANNNNNNNNNTGG 3 cut(s) 697, 1347, 1353
XmiI GTMKAC 1 cut(s) 387
XmnI GAANNNNTTC 1 cut(s) 957
ZrmI AGTACT 1 cut(s) 937
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.