Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0000855

Physical Location & Seq

Genomic Coordinates Reverse (-)

5983127 .. 5988772

Gene Structure 5646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g11000.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGGCAGACCCGACGTCGGAGCAGATAATCTATCTGCACGGCGACCTTGACCTCCAAATCATCGAGGCCCGGCGGTTACCTAACATGGACATCGTCTCCGAACGGTTCCGCCGCTGCTTCACCGCCTGCGACACCATCAACTGTGGTTCTCACTCCGAGGAGGCTCAGCAGTCGGCCGAGGACGGCAAGATTTCTCACCACCGGAAGCTCATCACCAGCGACTCTTACGTCAGCGTGTGCGTGCCTCAGGCCACGGTGGCGCGTACACGCGTCATCAAGAACGCGCAGAATCCTCAGTGGGGGGAGACTTTTTGCATCCCGCTCGCGCATCCCGTGGCTAAGCTTGAGTTTCAGGTCAAAGATAACGACGTCTTCGGCGCGCAGATTATCGGCACCGCTTCGATCTCGGCGGCCAAAATCGCCACCGGAGAAGTGATTTCCGGCTGGTTCGATATTGTCGGACCCGCCGGAAAGCCTCCGAAGCCTCAGTGCGCGATCAATGTCGAGTTGAAGTTCACTCCCGTCGAGAAAAATCCGGCATACAAGCACGGCATAGCCGGCGATCCAGAACGGAAGGGAGTCCCCAACACATACTTCCCTCTGAGAAAAGGCAGTCACGTGCGGCTCTACCAGGACGCGCACGTGCCGGAGGGGCTGCTGCCGCAGATTGAATTGGATGGAAGGAAGGTTTATAAGTCTGAGAATTGCTGGGAAGACATTTGCTATGCGATTTCGGAGGCTCACCATATGATTTATGTGGCTGGATGGTCTATATATCACAAAGTGAGGCTGGTTAGAGAGCCGAGCCGGCCGTTGCCACGCGGCGGCGAATTGACGCTAGGAGATATGCTCAAGTATAAGTCAGAAGAAGGCGTGCGGGTGTTGATGCTGGTCTGGGATGATAAGACCTCCCATGACAAGTTCTACTTAAAATCGGCAGGAATGATGGGAACACATGATGAAGAAACCCGGAAGTTTTTCAAGAATTCATCTGTCACTTGTGTTCTGGCACCTCGCTATGCCAGTAGTAAGCTTAGCATTATGAAACAACAGGTTGTTGGAACCCTCTTTACACACCATCAAAAATGTGTAATTGTGGACACACAAGCGTCTGGTAATAACCGCAAGATAACTTCATTTTTAGGGGGGCTTGATCTCTGTGATGGTCGTTATGACACGCCTGAGCACAGATTATTTCGTGATGTTGACACTGTGTTTAAAGAAGATTTCCATCAACCTACCTTTCCTGCTGGAACCAAGGCTCCAAGGCAACCATGGCATGATTTGCACTGTAGAATTGATGGGCCTGCTGCATATGATGTTCTCATAAACTTTGAGCAACGGTGGAGGAAAGCAACACAATGGAGGGAGTTTGGACTACGTAAAAAGGTTTCGCATTGGCATGATGATGCTTTAATTAAGATAGGCCGTATTTCATGGATACTCAGTCCTGAGATACCAGTTTCAAAGGATAGTAAATTTACAGTCATTCCCAAAAACGACACAGCTGTATGGGTTCAGAGAGAAGATGACCCCGAAAATTGGCATGTTCAGATTTTCCGGTCTATTGACTCCGGATCACTGAAAGGATTTCCCAAAGATGTAATTGTTGCTGAGTCACAGAACCTTATTTGCTCAAAGGATCTAGTAATAGATAAAAGCATTCAGACAGCATACATCAAGGCAATCAGATCTGCCCAACATTTCATATACATTGAAAATCAGTATTTTCTTGGTTCATCATATGCATGGCCAGATTATAAAAATGCAGGAGCTGACAATCTTATTCCAATGGAGTTGGCACTGAAGATTGCCAGCAAAATTAGAGCAAATGAGAGATTTGCAGTGTATGTAGTTTTACCTATGTGGCCTGAAGGTGATCCGAAAACTGCTGCAATGCAAGAAATTCTCTACTGGCAGAGCCAAACAATGCAAGCAATGTATGATGTTGTCGCACGAGAATTGAAAGCCTTGCAGCTTAAGGGCGTACATCCTCAAGATTACCTTAATTTCTATTGCCTTGGTAATCGGGAAAAACTGTCTGAGGAACCATCAAACATCAATGGTTCTACGATATCTGATGCATACAAGTATCAACGCTTTATGATTTATGTTCATGCCAAGGGTATGATAGTGGATGACGAGTATGTTATAGTGGGGTCTGCCAATATCAACCAAAGATCAATGGCTGGTACAAAAGACACCGAGATAGCTATGGGTTCGTATCAACCCCATCACACTTGGGCTGAGAAGAAGAGACATCCTTGTGGTCAGATATATGGGTATCGAATGTCGCTCTGGGCTGAACATCTTGGTATGTTTGACCCATGCTTTAAAGAGGCAGGAAGTTTGGAAACTGTTAGAACTGTGAATGGCATTGCCGAAGAAAACTGGAAGAGATACACATCACCGGATTTCACAGAATTGCAAGGTCACCTTCTTAGGTATCCGTTGCTGGTAGATGCTGATGGTAAGGTGAAACCTCTGCCAGGTTATGAAATTTTCCCTGATGTTGGCGGGAAAGTTATTGGAGCTCATTCTGCTACACTTCCTGATCAATTGACAACATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0008081 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010119 GO:0010646 GO:0010647 GO:0012501 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0023051 GO:0023056 GO:0030054 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046473 GO:0046486 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0090333 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

857

Amino Acids

96.97

Weight (kDa)

7.02

Isoelectric Point (pI)

32.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	16 - 151	8.4e-16	C2 domain
PLDc_2	PF13091	696 - 739	1.2e-06	PLD-like domain
PLDc	PF00614	703 - 728	3.1e-08	Phospholipase D Active site motif
PLD_C	PF12357	776 - 845	7.2e-26	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35790 AT4G35790 AT4G35790
fragaria_vesca	FvH4_1g11000 FvH4_1g11020 FvH4_1g11020 FvH4_2g37900 FvH4_5g01272 FvH4_5g28780 FvH4_5g28800 FvH4_7g08510 FvH4_7g08510
malus_domestica	MD02G1123100.v1.1 MD08G1149700.v1.1 MD08G1237200.v1.1 MD15G1006400.v1.1 MD15G1237100.v1.1
prunus_persica	Prupe.1G359000_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.7G175400_v2.0.a1
pyrus_communis	pycom02g09600 pycom15g00480 pycom15g21090
rosa_chinensis	RchiOBHm_Chr2g0098271 RchiOBHm_Chr6g0303711 RchiOBHm_Chr7g0221001 RchiOBHm_Chr7g0221011
rosa_laevigata	RLG00000002185 RLG00000011053 RLG00000016781
rosa_multiflora	Rmu_co8414259.1_g000001 Rmu_co8436567.1_g000002 Rmu_co8452585.1_g000001 Rmu_sc0001024.1_g000003 Rmu_sc0002105.1_g000010 Rmu_sc0002105.1_g000018 Rmu_sc0002105.1_g000020 Rmu_sc0009922.1_g000005 Rmu_sc0039265.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144090 Rroxscaffold_3G00238820 Rroxscaffold_7G00164460
rosa_rugosa	Rorug02G0071800 Rorug06G0324200 Rorug07G0199200 Rorug07G0199300 Rorug07G0199400 Rorug07G0199500 Rorug07G0199600
rosa_samantha	Rh1CG003000 Rh2AG118900 Rh2BG121800 Rh2CG123400 Rh2DG123500 Rh6AG438500 Rh6BG464500 Rh6CG450800 Rh6DG437500 Rh7AG339200 Rh7BG329900 Rh7CG357200 Rh7DG337900
rosa_wichuraiana	Rw2G009320 Rw6G037950 Rw7G028850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	693, 1761
AasI	GACNNNNNNGTC	1 cut(s)	227
AatII	GACGTC	2 cut(s)	17, 372
AccB1I	GGYRCC	2 cut(s)	392, 1009
AccBSI	CCGCTC	1 cut(s)	322
AccII	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
AccIII	TCCGGA	1 cut(s)	1574
AclWI	GGATC	4 cut(s)	557, 1585, 1650, 1874
AcoI	YGGCCR	4 cut(s)	174, 411, 809, 1751
AcsI	RAATTY	4 cut(s)	985, 1478, 1905, 2499
AcuI	CTGAAG	2 cut(s)	1826, 1893
AcvI	CACGTG	2 cut(s)	619, 643
AcyI	GRCGYC	2 cut(s)	14, 369
AdeI	CACNNNGTG	1 cut(s)	784
AfaI	GTAC	3 cut(s)	265, 1989, 2194
AfiI	CCNNNNNNNGG	6 cut(s)	16, 299, 824, 1542, 2489, 2513
AflII	CTTAAG	1 cut(s)	1979
AflIII	ACRYGT	1 cut(s)	268
AgsI	TTSAA	6 cut(s)	511, 671, 982, 1467, 1718, 1966
AhdI	GACNNNNNGTC	1 cut(s)	13
AjnI	CCWGG	2 cut(s)	630, 2488
AjuI	GAANNNNNNNTTGG	2 cut(s)	578, 610
AloI	GAACNNNNNNTCC	2 cut(s)	1246, 1278
AluBI	AGCT	8 cut(s)	208, 343, 1033, 1508, 1775, 1978, 2213, 2534
AluI	AGCT	8 cut(s)	208, 343, 1033, 1508, 1775, 1978, 2213, 2534
Alw21I	GWGCWC	2 cut(s)	1188, 2536
Alw26I	GTCTC	3 cut(s)	100, 299, 2251
AlwI	GGATC	4 cut(s)	557, 1585, 1650, 1874
AlwNI	CAGNNNCTG	1 cut(s)	1775
Aor13HI	TCCGGA	1 cut(s)	1574
AoxI	GGCC	9 cut(s)	66, 174, 249, 411, 809, 1304, 1426, 1751, 1868
ApeKI	GCWGC	6 cut(s)	114, 655, 658, 1310, 1892, 1975
ApoI	RAATTY	4 cut(s)	985, 1478, 1905, 2499
Asp700I	GAANNNNTTC	1 cut(s)	977
AspLEI	GCGC	7 cut(s)	262, 286, 328, 380, 382, 494, 640
AspS9I	GGNCC	3 cut(s)	67, 461, 1304
AsuC2I	CCSGG	2 cut(s)	70, 970
AsuHPI	GGTGA	8 cut(s)	112, 188, 205, 734, 1889, 2400, 2426, 2488
AvaII	GGWCC	1 cut(s)	461
AxyI	CCTNAGG	1 cut(s)	246
BalI	TGGCCA	1 cut(s)	1753
BanI	GGYRCC	2 cut(s)	392, 1009
BanII	GRGCYC	1 cut(s)	2536
BauI	CACGAG	1 cut(s)	1956
BbrPI	CACGTG	2 cut(s)	619, 643
BbsI	GAAGAC	2 cut(s)	364, 720
Bbv12I	GWGCWC	2 cut(s)	1188, 2536
BbvI	GCAGC	6 cut(s)	101, 642, 645, 1297, 1879, 1987
BceAI	ACGGC	5 cut(s)	55, 199, 565, 796, 1413
BcgI	CGANNNNNNTGC	2 cut(s)	304, 338
BciT130I	CCWGG	2 cut(s)	632, 2490
BciVI	GTATCC	2 cut(s)	1434, 2457
BclI	TGATCA	1 cut(s)	2554
BcnI	CCSGG	2 cut(s)	70, 970
BcoDI	GTCTC	3 cut(s)	100, 299, 2251
BfaI	CTAG	2 cut(s)	839, 1646
BfmI	CTRYAG	1 cut(s)	1291
BfrI	CTTAAG	1 cut(s)	1979
BfuI	GTATCC	2 cut(s)	1434, 2457
BglI	GCCNNNNNGGC	3 cut(s)	257, 652, 808
BglII	AGATCT	1 cut(s)	1691
BlpI	GCTNAGC	3 cut(s)	165, 339, 1034
Bme1390I	CCNGG	4 cut(s)	70, 632, 970, 2490
Bme18I	GGWCC	1 cut(s)	461
BmeRI	GACNNNNNGTC	1 cut(s)	13
BmgT120I	GGNCC	3 cut(s)	67, 461, 1304
BmiI	GGNNCC	8 cut(s)	107, 394, 463, 1011, 1063, 1255, 1263, 2049
BmrFI	CCNGG	4 cut(s)	70, 632, 970, 2490
BmsI	GCATC	6 cut(s)	324, 337, 876, 1399, 2071, 2452
BpiI	GAAGAC	2 cut(s)	364, 720
BplI	GAGNNNNNCTC	2 cut(s)	834, 866
Bpu10I	CCTNAGC	1 cut(s)	1182
Bpu1102I	GCTNAGC	3 cut(s)	165, 339, 1034
BpuEI	CTTGAG	3 cut(s)	365, 836, 1980
BpuMI	CCSGG	2 cut(s)	70, 970
BsaAI	YACGTR	3 cut(s)	619, 643, 1382
BsaBI	GATNNNNATC	2 cut(s)	1230, 2404
BsaHI	GRCGYC	2 cut(s)	14, 369
BsaJI	CCNNGG	9 cut(s)	156, 177, 252, 333, 1257, 1265, 1274, 2020, 2121
BsaWI	WCCGGW	5 cut(s)	201, 425, 1560, 1574, 2410
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 1246, 1276
Bsc4I	CCNNNNNNNGG	6 cut(s)	16, 299, 824, 1542, 2489, 2513
Bse118I	RCCGGY	2 cut(s)	557, 807
Bse1I	ACTGG	4 cut(s)	1023, 1460, 1919, 2396
Bse21I	CCTNAGG	1 cut(s)	246
Bse3DI	GCAATG	3 cut(s)	1902, 1944, 2376
Bse8I	GATNNNNATC	2 cut(s)	1230, 2404
BseAI	TCCGGA	1 cut(s)	1574
BseBI	CCWGG	2 cut(s)	632, 2490
BseDI	CCNNGG	9 cut(s)	156, 177, 252, 333, 1257, 1265, 1274, 2020, 2121
BseGI	GGATG	8 cut(s)	315, 328, 682, 770, 904, 1990, 2143, 2260
BseJI	GATNNNNATC	2 cut(s)	1230, 2404
BseLI	CCNNNNNNNGG	6 cut(s)	16, 299, 824, 1542, 2489, 2513
BseMI	GCAATG	3 cut(s)	1902, 1944, 2376
BseNI	ACTGG	4 cut(s)	1023, 1460, 1919, 2396
BsePI	GCGCGC	1 cut(s)	378
BseRI	GAGGAG	1 cut(s)	173
BseX3I	CGGCCG	2 cut(s)	174, 809
BseXI	GCAGC	6 cut(s)	101, 642, 645, 1297, 1879, 1987
BseYI	CCCAGC	1 cut(s)	708
BsgI	GTGCAG	1 cut(s)	20
Bsh1236I	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
Bsh1285I	CGRYCG	2 cut(s)	177, 812
BshFI	GGCC	9 cut(s)	68, 176, 251, 413, 811, 1306, 1428, 1753, 1870
BshNI	GGYRCC	2 cut(s)	392, 1009
BsiEI	CGRYCG	2 cut(s)	177, 812
BsiHKAI	GWGCWC	2 cut(s)	1188, 2536
BslFI	GGGAC	1 cut(s)	566
BslI	CCNNNNNNNGG	6 cut(s)	16, 299, 824, 1542, 2489, 2513
BsmAI	GTCTC	3 cut(s)	100, 299, 2251
BsmBI	CGTCTC	1 cut(s)	100
BsmFI	GGGAC	1 cut(s)	566
BsmI	GAATGC	1 cut(s)	1662
BsnI	GGCC	9 cut(s)	68, 176, 251, 413, 811, 1306, 1428, 1753, 1870
Bsp1286I	GDGCHC	2 cut(s)	1188, 2536
Bsp13I	TCCGGA	1 cut(s)	1574
Bsp1720I	GCTNAGC	3 cut(s)	165, 339, 1034
Bsp19I	CCATGG	1 cut(s)	1274
BspANI	GGCC	9 cut(s)	68, 176, 251, 413, 811, 1306, 1428, 1753, 1870
BspEI	TCCGGA	1 cut(s)	1574
BspFNI	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
BspLI	GGNNCC	8 cut(s)	107, 394, 463, 1011, 1063, 1255, 1263, 2049
BspPI	GGATC	4 cut(s)	557, 1585, 1650, 1874
BspT107I	GGYRCC	2 cut(s)	392, 1009
BspTI	CTTAAG	1 cut(s)	1979
BsrBI	CCGCTC	1 cut(s)	322
BsrDI	GCAATG	3 cut(s)	1902, 1944, 2376
BsrFI	RCCGGY	2 cut(s)	557, 807
BsrI	ACTGG	4 cut(s)	1023, 1460, 1919, 2396
BssAI	RCCGGY	2 cut(s)	557, 807
BssECI	CCNNGG	9 cut(s)	156, 177, 252, 333, 1257, 1265, 1274, 2020, 2121
BssHII	GCGCGC	1 cut(s)	378
BssNI	GRCGYC	2 cut(s)	14, 369
BssSI	CACGAG	1 cut(s)	1956
BssT1I	CCWWGG	5 cut(s)	1257, 1265, 1274, 2020, 2121
Bst2BI	CACGAG	1 cut(s)	1956
Bst2UI	CCWGG	2 cut(s)	632, 2490
Bst6I	CTCTTC	2 cut(s)	2249, 2390
BstACI	GRCGYC	2 cut(s)	14, 369
BstAFI	CTTAAG	1 cut(s)	1979
BstAPI	GCANNNNNTGC	1 cut(s)	1285
BstBAI	YACGTR	3 cut(s)	619, 643, 1382
BstDSI	CCRYGG	3 cut(s)	252, 333, 1274
BstEII	GGTNACC	2 cut(s)	75, 2432
BstENI	CCTNNNNNAGG	1 cut(s)	2487
BstF5I	GGATG	8 cut(s)	315, 328, 682, 770, 904, 1990, 2143, 2260
BstFNI	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
BstHHI	GCGC	7 cut(s)	262, 286, 328, 380, 382, 494, 640
BstMAI	GTCTC	3 cut(s)	100, 299, 2251
BstMCI	CGRYCG	2 cut(s)	177, 812
BstNI	CCWGG	2 cut(s)	632, 2490
BstNSI	RCATGY	1 cut(s)	1550
BstPI	GGTNACC	2 cut(s)	75, 2432
BstSCI	CCNGG	4 cut(s)	68, 630, 968, 2488
BstSFI	CTRYAG	1 cut(s)	1291
BstSNI	TACGTA	1 cut(s)	1382
BstUI	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
BstV1I	GCAGC	6 cut(s)	101, 642, 645, 1297, 1879, 1987
BstV2I	GAAGAC	2 cut(s)	364, 720
BstX2I	RGATCY	2 cut(s)	1642, 1691
BstYI	RGATCY	2 cut(s)	1642, 1691
BstZI	CGGCCG	2 cut(s)	174, 809
Bsu36I	CCTNAGG	1 cut(s)	246
BsuI	GTATCC	2 cut(s)	1434, 2457
BsuRI	GGCC	9 cut(s)	68, 176, 251, 413, 811, 1306, 1428, 1753, 1870
BtgI	CCRYGG	3 cut(s)	252, 333, 1274
BtsCI	GGATG	8 cut(s)	315, 328, 682, 770, 904, 1990, 2143, 2260
BtsI	GCAGTG	1 cut(s)	1851
BtsIMutI	CAGTG	7 cut(s)	302, 494, 1209, 1288, 1580, 1802, 1851
CaiI	CAGNNNCTG	1 cut(s)	1775
CfoI	GCGC	7 cut(s)	262, 286, 328, 380, 382, 494, 640
Cfr10I	RCCGGY	2 cut(s)	557, 807
Cfr13I	GGNCC	3 cut(s)	67, 461, 1304
CseI	GACGC	4 cut(s)	259, 644, 844, 1098
Csp6I	GTAC	3 cut(s)	264, 1988, 2193
CviQI	GTAC	3 cut(s)	264, 1988, 2193
DraI	TTTAAA	2 cut(s)	1219, 2335
DraIII	CACNNNGTG	1 cut(s)	784
DrdI	GACNNNNNNGTC	1 cut(s)	227
DriI	GACNNNNNGTC	1 cut(s)	13
DseDI	GACNNNNNNGTC	1 cut(s)	227
EaeI	YGGCCR	4 cut(s)	174, 411, 809, 1751
EagI	CGGCCG	2 cut(s)	174, 809
Eam1104I	CTCTTC	2 cut(s)	2249, 2390
Eam1105I	GACNNNNNGTC	1 cut(s)	13
EarI	CTCTTC	2 cut(s)	2249, 2390
EciI	GGCGGA	1 cut(s)	98
Ecl136II	GAGCTC	1 cut(s)	2534
EclXI	CGGCCG	2 cut(s)	174, 809
Eco105I	TACGTA	1 cut(s)	1382
Eco130I	CCWWGG	5 cut(s)	1257, 1265, 1274, 2020, 2121
Eco24I	GRGCYC	1 cut(s)	2536
Eco32I	GATATC	1 cut(s)	2076
Eco47I	GGWCC	1 cut(s)	461
Eco52I	CGGCCG	2 cut(s)	174, 809
Eco53kI	GAGCTC	1 cut(s)	2534
Eco57I	CTGAAG	2 cut(s)	1826, 1893
Eco72I	CACGTG	2 cut(s)	619, 643
Eco81I	CCTNAGG	1 cut(s)	246
Eco91I	GGTNACC	2 cut(s)	75, 2432
EcoICRI	GAGCTC	1 cut(s)	2534
EcoNI	CCTNNNNNAGG	1 cut(s)	2487
EcoO65I	GGTNACC	2 cut(s)	75, 2432
EcoRI	GAATTC	1 cut(s)	985
EcoRII	CCWGG	2 cut(s)	630, 2488
EcoRV	GATATC	1 cut(s)	2076
EcoT14I	CCWWGG	5 cut(s)	1257, 1265, 1274, 2020, 2121
EcoT22I	ATGCAT	2 cut(s)	1750, 2086
EcoT38I	GRGCYC	1 cut(s)	2536
ErhI	CCWWGG	5 cut(s)	1257, 1265, 1274, 2020, 2121
Esp3I	CGTCTC	1 cut(s)	100
FalI	AAGNNNNNCTT	6 cut(s)	911, 943, 1989, 2021, 2421, 2453
FaqI	GGGAC	1 cut(s)	566
FauI	CCCGC	4 cut(s)	327, 472, 870, 2510
FauNDI	CATATG	3 cut(s)	747, 1315, 1744
FbaI	TGATCA	1 cut(s)	2554
FokI	GGATG	8 cut(s)	302, 315, 689, 777, 911, 1977, 2150, 2247
FriOI	GRGCYC	1 cut(s)	2536
FspBI	CTAG	2 cut(s)	839, 1646
GlaI	GCGC	7 cut(s)	261, 285, 327, 379, 381, 493, 639
GsaI	CCCAGC	1 cut(s)	712
HaeIII	GGCC	9 cut(s)	68, 176, 251, 413, 811, 1306, 1428, 1753, 1870
HgaI	GACGC	4 cut(s)	259, 644, 844, 1098
HhaI	GCGC	7 cut(s)	262, 286, 328, 380, 382, 494, 640
Hin1I	GRCGYC	2 cut(s)	14, 369
Hin6I	GCGC	7 cut(s)	260, 284, 326, 378, 380, 492, 638
HinP1I	GCGC	7 cut(s)	260, 284, 326, 378, 380, 492, 638
HincII	GTYRAC	1 cut(s)	1207
HindII	GTYRAC	1 cut(s)	1207
HindIII	AAGCTT	2 cut(s)	341, 1031
HinfI	GANTC	5 cut(s)	221, 289, 579, 1571, 1616
HphI	GGTGA	8 cut(s)	112, 188, 205, 734, 1889, 2400, 2426, 2488
Hpy166II	GTNNAC	4 cut(s)	266, 516, 1099, 1207
Hpy8I	GTNNAC	4 cut(s)	266, 516, 1099, 1207
Hpy99I	CGWCG	4 cut(s)	16, 19, 371, 527
HpyAV	CCTTC	6 cut(s)	568, 675, 679, 863, 1868, 2447
HpyCH4IV	ACGT	6 cut(s)	14, 228, 369, 618, 642, 1381
HpySE526I	ACGT	6 cut(s)	14, 228, 369, 618, 642, 1381
Hsp92I	GRCGYC	2 cut(s)	14, 369
HspAI	GCGC	7 cut(s)	260, 284, 326, 378, 380, 492, 638
Kpn2I	TCCGGA	1 cut(s)	1574
KroI	GCCGGC	2 cut(s)	557, 807
KroNI	GCCGGC	2 cut(s)	559, 809
Ksp22I	TGATCA	1 cut(s)	2554
LmnI	GCTCC	4 cut(s)	19, 1267, 1772, 2531
Lsp1109I	GCAGC	6 cut(s)	101, 642, 645, 1297, 1879, 1987
LweI	GCATC	6 cut(s)	324, 337, 876, 1399, 2071, 2452
MaeI	CTAG	2 cut(s)	839, 1646
MaeII	ACGT	6 cut(s)	14, 228, 369, 618, 642, 1381
MaeIII	GTNAC	5 cut(s)	75, 614, 994, 1617, 2432
MbiI	CCGCTC	1 cut(s)	322
MfeI	CAATTG	1 cut(s)	2558
MflI	RGATCY	2 cut(s)	1642, 1691
MhlI	GDGCHC	2 cut(s)	1188, 2536
MlsI	TGGCCA	1 cut(s)	1753
MluI	ACGCGT	1 cut(s)	268
MluNI	TGGCCA	1 cut(s)	1753
MlyI	GAGTC	4 cut(s)	215, 588, 1565, 1625
MmeI	TCCRAC	2 cut(s)	439, 1039
Mox20I	TGGCCA	1 cut(s)	1753
Mph1103I	ATGCAT	2 cut(s)	1750, 2086
MroI	TCCGGA	1 cut(s)	1574
MroNI	GCCGGC	2 cut(s)	557, 807
MroXI	GAANNNNTTC	1 cut(s)	977
MscI	TGGCCA	1 cut(s)	1753
MseI	TTAA	7 cut(s)	929, 1218, 1415, 1419, 1980, 2007, 2334
MslI	CAYNNNNRTG	4 cut(s)	1401, 1407, 1747, 2265
Msp20I	TGGCCA	1 cut(s)	1753
MspA1I	CMGCKG	2 cut(s)	114, 1508
MspCI	CTTAAG	1 cut(s)	1979
MspR9I	CCNGG	4 cut(s)	70, 632, 970, 2490
MunI	CAATTG	1 cut(s)	2558
Mva1269I	GAATGC	1 cut(s)	1662
MvaI	CCWGG	2 cut(s)	632, 2490
MvnI	CGCG	8 cut(s)	262, 270, 284, 326, 380, 494, 638, 822
NaeI	GCCGGC	2 cut(s)	559, 809
NciI	CCSGG	2 cut(s)	70, 970
NcoI	CCATGG	1 cut(s)	1274
NdeI	CATATG	3 cut(s)	747, 1315, 1744
NgoMIV	GCCGGC	2 cut(s)	557, 807
NlaIV	GGNNCC	8 cut(s)	107, 394, 463, 1011, 1063, 1255, 1263, 2049
NmeAIII	GCCGAG	3 cut(s)	202, 386, 828
NmuCI	GTSAC	4 cut(s)	614, 994, 1617, 2432
NsiI	ATGCAT	2 cut(s)	1750, 2086
NspI	RCATGY	1 cut(s)	1550
PacI	TTAATTAA	1 cut(s)	1419
PauI	GCGCGC	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	330
PctI	GAATGC	1 cut(s)	1662
PdiI	GCCGGC	2 cut(s)	559, 809
PdmI	GAANNNNTTC	1 cut(s)	977
PfeI	GAWTC	1 cut(s)	289
PflFI	GACNNNGTC	1 cut(s)	92
PleI	GAGTC	4 cut(s)	215, 587, 1565, 1624
PmaCI	CACGTG	2 cut(s)	619, 643
PmlI	CACGTG	2 cut(s)	619, 643
PpsI	GAGTC	4 cut(s)	215, 587, 1565, 1624
Ppu21I	YACGTR	3 cut(s)	619, 643, 1382
PsiI	TTATAA	2 cut(s)	693, 1761
Psp124BI	GAGCTC	1 cut(s)	2536
Psp6I	CCWGG	2 cut(s)	630, 2488
PspCI	CACGTG	2 cut(s)	619, 643
PspEI	GGTNACC	2 cut(s)	75, 2432
PspFI	CCCAGC	1 cut(s)	708
PspGI	CCWGG	2 cut(s)	630, 2488
PspN4I	GGNNCC	8 cut(s)	107, 394, 463, 1011, 1063, 1255, 1263, 2049
PspPI	GGNCC	3 cut(s)	67, 461, 1304
PsrI	GAACNNNNNNTAC	2 cut(s)	1054, 1086
PstNI	CAGNNNCTG	1 cut(s)	1775
PsuI	RGATCY	2 cut(s)	1642, 1691
PsyI	GACNNNGTC	1 cut(s)	92
PteI	GCGCGC	1 cut(s)	378
PvuII	CAGCTG	1 cut(s)	1508
RsaI	GTAC	3 cut(s)	265, 1989, 2194
RsaNI	GTAC	3 cut(s)	264, 1988, 2193
RseI	CAYNNNNRTG	4 cut(s)	1401, 1407, 1747, 2265
SacI	GAGCTC	1 cut(s)	2536
SaqAI	TTAA	7 cut(s)	929, 1218, 1415, 1419, 1980, 2007, 2334
Sau96I	GGNCC	3 cut(s)	67, 461, 1304
SchI	GAGTC	4 cut(s)	215, 588, 1565, 1625
ScrFI	CCNGG	4 cut(s)	70, 632, 970, 2490
SduI	GDGCHC	2 cut(s)	1188, 2536
SfaNI	GCATC	6 cut(s)	324, 337, 876, 1399, 2071, 2452
SfcI	CTRYAG	1 cut(s)	1291
SinI	GGWCC	1 cut(s)	461
SmiMI	CAYNNNNRTG	4 cut(s)	1401, 1407, 1747, 2265
SmlI	CTYRAG	4 cut(s)	344, 851, 1979, 1995
SmoI	CTYRAG	4 cut(s)	344, 851, 1979, 1995
SnaBI	TACGTA	1 cut(s)	1382
SspMI	CTAG	2 cut(s)	839, 1646
SstI	GAGCTC	1 cut(s)	2536
StyD4I	CCNGG	4 cut(s)	68, 630, 968, 2488
StyI	CCWWGG	5 cut(s)	1257, 1265, 1274, 2020, 2121
TaiI	ACGT	6 cut(s)	17, 231, 372, 621, 645, 1384
TaqI	TCGA	6 cut(s)	63, 401, 450, 504, 525, 2287
TauI	GCSGC	6 cut(s)	114, 413, 625, 664, 825, 828
TfiI	GAWTC	1 cut(s)	289
Tru1I	TTAA	7 cut(s)	929, 1218, 1415, 1419, 1980, 2007, 2334
Tru9I	TTAA	7 cut(s)	929, 1218, 1415, 1419, 1980, 2007, 2334
TscAI	CASTG	7 cut(s)	302, 494, 1216, 1295, 1587, 1809, 1851
TseFI	GTSAC	4 cut(s)	614, 994, 1617, 2432
TseI	GCWGC	6 cut(s)	114, 655, 658, 1310, 1892, 1975
Tsp45I	GTSAC	4 cut(s)	614, 994, 1617, 2432
TspDTI	ATGAA	9 cut(s)	975, 978, 1058, 1125, 1425, 1696, 1728, 2105, 2511
TspGWI	ACGGA	2 cut(s)	586, 2439
TspRI	CASTG	7 cut(s)	302, 494, 1216, 1295, 1587, 1809, 1851
Tth111I	GACNNNGTC	1 cut(s)	92
Vha464I	CTTAAG	1 cut(s)	1979
VpaK11BI	GGWCC	1 cut(s)	461
XagI	CCTNNNNNAGG	1 cut(s)	2487
XapI	RAATTY	4 cut(s)	985, 1478, 1905, 2499
XceI	RCATGY	1 cut(s)	1550
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1272
XmnI	GAANNNNTTC	1 cut(s)	977
XspI	CTAG	2 cut(s)	839, 1646
ZraI	GACGTC	2 cut(s)	15, 370
Zsp2I	ATGCAT	2 cut(s)	1750, 2086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.