Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0000855

Physical Location & Seq

Genomic Coordinates Reverse (-)

17271817 .. 17274437

Gene Structure 2621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0199600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCATCTCCTACTCCTCTGTTTCTAGTACTCTGTTTCACTTACTTCTCTGTCTCATTCTCCCAAACACTCTTCCTCCCCCTAACCCACTCCCTCTCCCAAACCCAATTCAACACCACCCACCACCTCCTCAAAGCCACTGCCACGCGCTCCGCCACCCGCTTCCACCGCCACCAACACCACCGCAAAACCAACCAAGTCTCTCTCCCACTTGCTCCGGGAAGCGACTACACTCTCTCCTTCACTCTCGGCTCCACCCCTCCCCAGCCCATCTCCCTCTACATGGACACCGGCAGCGACCTCGTCTGGTTCCCCTGCTCTCCCTTCGAGTGCATTCTCTGCGAAGGCAAGCCCAACTCCTCCTTCCCCCCGCCCAAAATCCCCAAAAACGCCGCCGTTTCCTGCGACTCCCACTCCTGCTCCGCCGCGCACTCCGCCCTTAGTTCCCGCTCTCTCTGCGCCATAGCCAACTGTCCTCTCGAGTCCATTGAGCTCTCCGAGTGCTCCTCTTTCAAATGCCCGCCGTTTTATTATGCCTACGGCGACGGAAGCTTGATCTCCAAGCTTTTCAGATACAGCTTATCAATTCCCGTGTCAACTCCGTCGCTGATTCTTCCGAACTTCACTTTCGGGTGTTCCCATTCTGCCCTCGGCGAGCCTATTGGGGTTGCCGGCTTCGGCCGGGGACTGCTATCTCTCCCGGCCCAGCTCGCCAAGTCCTCTCCCCAGCTCGGTAATCAGTTCTCTTACTGTTTGGTTTCTCACTCCTTTGACCAGGACCGAGTTCGGAAACCGAGTCCGCTCATTCTCGGCCGGTACGATCAGAAATCGGTTTATGGAGCTGATGAGTATATCTACACCTCCATGCTTTACAACCCGAAGCACCCCTATTTCTACTGTGTTGGTTTGGCCGGAATATCTGTCGGGAAAAGGGTTGTTCCGGCTCCGGAGTTTCTCAAAAGGGTCGATGAGAAAGGGAACGGTGGAGTTGTGGTGGACTCCGGGACGACGTTCACTATGTTGCCGCAGCGGTTCTATAACTCGTTGGTGGCCGAGTTCGACCGCCGAGTCGGACGAGTTCACAAGCGGGCGACTAAGGTTGAGGACGGAACCGGGCTCGGGCCGTGTTACTACTACGACGCCGTTGTGGAAGTTCCCGCCGTGACTCTGCATTTTGTAGGGAACAAATCCAGTGTGGTGCTGCCTAGGAAGAACTATTTTTACGAGTTTACGGACGGTGGCGATGGGGTGGGGAGGAAGCGGAAAGTGGGGTGTTGGATGTTGATGAACGGTGGCGATGAGAAGGACTCGGGCGGTGGGCCCGGGGCCATTTTTGGGAATTACCAGCAGCAAGGGTTTGAGGTGGTTTATGATTTGGAGAAGCACAGGGTTGGATTTGCAAAGAGGCAGTGTTCATTGCTTTGGGACAATCTCAACCAGAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0008081 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010119 GO:0010646 GO:0010647 GO:0012501 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0023051 GO:0023056 GO:0030054 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046473 GO:0046486 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0090333 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

481

Amino Acids

52.95

Weight (kDa)

8.81

Isoelectric Point (pI)

45.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	77 - 270	1.7e-27	Xylanase inhibitor N-terminal
Asp	PF00026	77 - 468	4.1e-09	Eukaryotic aspartyl protease
TAXi_C	PF14541	299 - 468	3.8e-28	Xylanase inhibitor C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35790 AT4G35790 AT4G35790
fragaria_vesca	FvH4_1g11000 FvH4_1g11020 FvH4_1g11020 FvH4_2g37900 FvH4_5g01272 FvH4_5g28780 FvH4_5g28800 FvH4_7g08510 FvH4_7g08510
malus_domestica	MD02G1123100.v1.1 MD08G1149700.v1.1 MD08G1237200.v1.1 MD15G1006400.v1.1 MD15G1237100.v1.1
prunus_persica	Prupe.1G359000_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.7G175400_v2.0.a1
pyrus_communis	pycom02g09600 pycom15g00480 pycom15g21090
rosa_chinensis	RchiOBHm_Chr2g0098271 RchiOBHm_Chr6g0303711 RchiOBHm_Chr7g0221001 RchiOBHm_Chr7g0221011
rosa_laevigata	RLG00000002185 RLG00000011053 RLG00000016781
rosa_multiflora	Rmu_co8414259.1_g000001 Rmu_co8436567.1_g000002 Rmu_co8452585.1_g000001 Rmu_sc0001024.1_g000003 Rmu_sc0002105.1_g000010 Rmu_sc0002105.1_g000018 Rmu_sc0002105.1_g000020 Rmu_sc0009922.1_g000005 Rmu_sc0039265.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144090 Rroxscaffold_3G00238820 Rroxscaffold_7G00164460
rosa_rugosa	Rorug02G0071800 Rorug06G0324200 Rorug07G0199200 Rorug07G0199300 Rorug07G0199400 Rorug07G0199500 Rorug07G0199600
rosa_samantha	Rh1CG003000 Rh2AG118900 Rh2BG121800 Rh2CG123400 Rh2DG123500 Rh6AG438500 Rh6BG464500 Rh6CG450800 Rh6DG437500 Rh7AG339200 Rh7BG329900 Rh7CG357200 Rh7DG337900
rosa_wichuraiana	Rw2G009320 Rw6G037950 Rw7G028850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1067
AccBSI	CCGCTC	2 cut(s)	450, 802
AccII	CGCG	2 cut(s)	148, 428
AccIII	TCCGGA	1 cut(s)	946
AcoI	YGGCCR	4 cut(s)	679, 811, 909, 1050
AcyI	GRCGYC	1 cut(s)	1140
AfaI	GTAC	2 cut(s)	30, 818
AfiI	CCNNNNNNNGG	4 cut(s)	283, 731, 1119, 1335
AgsI	TTSAA	2 cut(s)	112, 514
AjnI	CCWGG	1 cut(s)	774
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AluBI	AGCT	7 cut(s)	493, 552, 565, 579, 709, 730, 842
AluI	AGCT	7 cut(s)	493, 552, 565, 579, 709, 730, 842
Alw21I	GWGCWC	2 cut(s)	495, 506
Alw26I	GTCTC	2 cut(s)	58, 205
Ama87I	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
Aor13HI	TCCGGA	1 cut(s)	946
AoxI	GGCC	8 cut(s)	679, 702, 811, 909, 1050, 1121, 1319, 1326
ApaI	GGGCCC	1 cut(s)	1323
ApeKI	GCWGC	4 cut(s)	294, 1027, 1201, 1348
AspA2I	CCTAGG	1 cut(s)	1205
AspLEI	GCGC	3 cut(s)	150, 430, 461
AspS9I	GGNCC	6 cut(s)	703, 778, 1121, 1319, 1320, 1326
AsuC2I	CCSGG	7 cut(s)	219, 683, 701, 1003, 1114, 1323, 1324
AvaI	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
AvaII	GGWCC	1 cut(s)	778
AvrII	CCTAGG	1 cut(s)	1205
BaeGI	GKGCMC	1 cut(s)	1323
BanII	GRGCYC	3 cut(s)	495, 1119, 1323
Bbv12I	GWGCWC	2 cut(s)	495, 506
BbvI	GCAGC	4 cut(s)	306, 1039, 1188, 1360
BccI	CCATC	2 cut(s)	278, 1238
BceAI	ACGGC	6 cut(s)	380, 508, 556, 1108, 1127, 1145
BcgI	CGANNNNNNTGC	2 cut(s)	283, 317
BciT130I	CCWGG	1 cut(s)	776
BcnI	CCSGG	7 cut(s)	219, 683, 701, 1003, 1114, 1323, 1324
BcoDI	GTCTC	2 cut(s)	58, 205
BfaI	CTAG	2 cut(s)	26, 1206
BisI	GCNGC	7 cut(s)	295, 393, 426, 1025, 1028, 1202, 1349
BlnI	CCTAGG	1 cut(s)	1205
BlsI	GCNGC	7 cut(s)	296, 394, 427, 1026, 1029, 1203, 1350
BmcAI	AGTACT	1 cut(s)	30
Bme1390I	CCNGG	8 cut(s)	219, 683, 701, 776, 1003, 1114, 1323, 1324
Bme18I	GGWCC	1 cut(s)	778
BmeT110I	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
BmgT120I	GGNCC	6 cut(s)	703, 778, 1121, 1319, 1320, 1326
BmiI	GGNNCC	6 cut(s)	253, 311, 945, 1111, 1321, 1327
BmrFI	CCNGG	8 cut(s)	219, 683, 701, 776, 1003, 1114, 1323, 1324
BmsI	GCATC	1 cut(s)	14
BplI	GAGNNNNNCTC	4 cut(s)	491, 523, 1292, 1324
BpuMI	CCSGG	7 cut(s)	219, 683, 701, 1003, 1114, 1323, 1324
BsaHI	GRCGYC	1 cut(s)	1140
BsaJI	CCNNGG	5 cut(s)	649, 682, 1205, 1322, 1323
BsaWI	WCCGGW	1 cut(s)	946
Bsc4I	CCNNNNNNNGG	4 cut(s)	283, 731, 1119, 1335
Bse118I	RCCGGY	3 cut(s)	290, 671, 813
Bse1I	ACTGG	1 cut(s)	1191
Bse3DI	GCAATG	1 cut(s)	1415
BseAI	TCCGGA	1 cut(s)	946
BseBI	CCWGG	1 cut(s)	776
BseDI	CCNNGG	5 cut(s)	649, 682, 1205, 1322, 1323
BseGI	GGATG	1 cut(s)	1284
BseLI	CCNNNNNNNGG	4 cut(s)	283, 731, 1119, 1335
BseMI	GCAATG	1 cut(s)	1415
BseNI	ACTGG	1 cut(s)	1191
BseRI	GAGGAG	4 cut(s)	6, 119, 349, 496
BseSI	GKGCMC	1 cut(s)	1323
BseX3I	CGGCCG	2 cut(s)	679, 811
BseXI	GCAGC	4 cut(s)	306, 1039, 1188, 1360
BseYI	CCCAGC	3 cut(s)	264, 705, 726
Bsh1236I	CGCG	2 cut(s)	148, 428
Bsh1285I	CGRYCG	3 cut(s)	682, 814, 1063
BshFI	GGCC	8 cut(s)	681, 704, 813, 911, 1052, 1123, 1321, 1328
BsiEI	CGRYCG	3 cut(s)	682, 814, 1063
BsiHKAI	GWGCWC	2 cut(s)	495, 506
BsiHKCI	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
BslFI	GGGAC	3 cut(s)	699, 1018, 1439
BslI	CCNNNNNNNGG	4 cut(s)	283, 731, 1119, 1335
BsmAI	GTCTC	2 cut(s)	58, 205
BsmFI	GGGAC	3 cut(s)	699, 1018, 1439
BsmI	GAATGC	1 cut(s)	333
BsnI	GGCC	8 cut(s)	681, 704, 813, 911, 1052, 1123, 1321, 1328
BsoBI	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
Bsp120I	GGGCCC	1 cut(s)	1319
Bsp1286I	GDGCHC	4 cut(s)	495, 506, 1119, 1323
Bsp13I	TCCGGA	1 cut(s)	946
Bsp143I	GATC	2 cut(s)	555, 820
BspANI	GGCC	8 cut(s)	681, 704, 813, 911, 1052, 1123, 1321, 1328
BspEI	TCCGGA	1 cut(s)	946
BspFNI	CGCG	2 cut(s)	148, 428
BspLI	GGNNCC	6 cut(s)	253, 311, 945, 1111, 1321, 1327
BsrBI	CCGCTC	2 cut(s)	450, 802
BsrDI	GCAATG	1 cut(s)	1415
BsrFI	RCCGGY	3 cut(s)	290, 671, 813
BsrI	ACTGG	1 cut(s)	1191
BssAI	RCCGGY	3 cut(s)	290, 671, 813
BssECI	CCNNGG	5 cut(s)	649, 682, 1205, 1322, 1323
BssMI	GATC	2 cut(s)	555, 820
BssNI	GRCGYC	1 cut(s)	1140
BssT1I	CCWWGG	1 cut(s)	1205
Bst2UI	CCWGG	1 cut(s)	776
Bst4CI	ACNGT	6 cut(s)	473, 752, 899, 983, 1238, 1292
Bst6I	CTCTTC	1 cut(s)	77
BstACI	GRCGYC	1 cut(s)	1140
BstAPI	GCANNNNNTGC	1 cut(s)	339
BstC8I	GCNNGC	6 cut(s)	350, 521, 656, 673, 711, 1089
BstDEI	CTNAG	2 cut(s)	440, 1095
BstF5I	GGATG	1 cut(s)	1284
BstFNI	CGCG	2 cut(s)	148, 428
BstHHI	GCGC	3 cut(s)	150, 430, 461
BstKTI	GATC	2 cut(s)	558, 823
BstMAI	GTCTC	2 cut(s)	58, 205
BstMBI	GATC	2 cut(s)	555, 820
BstMCI	CGRYCG	3 cut(s)	682, 814, 1063
BstMWI	GCNNNNNNNGC	6 cut(s)	168, 339, 434, 456, 549, 710
BstNI	CCWGG	1 cut(s)	776
BstSCI	CCNGG	8 cut(s)	217, 681, 699, 774, 1001, 1112, 1321, 1322
BstSLI	GKGCMC	1 cut(s)	1323
BstUI	CGCG	2 cut(s)	148, 428
BstV1I	GCAGC	4 cut(s)	306, 1039, 1188, 1360
BstZI	CGGCCG	2 cut(s)	679, 811
BsuRI	GGCC	8 cut(s)	681, 704, 813, 911, 1052, 1123, 1321, 1328
BtgZI	GCGATG	2 cut(s)	1257, 1311
BtsCI	GGATG	1 cut(s)	1284
BtsI	GCAGTG	2 cut(s)	138, 1415
BtsIMutI	CAGTG	3 cut(s)	138, 1198, 1415
Cac8I	GCNNGC	6 cut(s)	350, 521, 656, 673, 711, 1089
CfoI	GCGC	3 cut(s)	150, 430, 461
Cfr10I	RCCGGY	3 cut(s)	290, 671, 813
Cfr13I	GGNCC	6 cut(s)	703, 778, 1121, 1319, 1320, 1326
Cfr9I	CCCGGG	1 cut(s)	1322
CseI	GACGC	1 cut(s)	1148
Csp6I	GTAC	2 cut(s)	29, 817
CviAII	CATG	2 cut(s)	283, 865
CviQI	GTAC	2 cut(s)	29, 817
DdeI	CTNAG	2 cut(s)	440, 1095
DpnI	GATC	2 cut(s)	557, 822
DpnII	GATC	2 cut(s)	555, 820
DrdI	GACNNNNNNGTC	1 cut(s)	1067
DseDI	GACNNNNNNGTC	1 cut(s)	1067
EaeI	YGGCCR	4 cut(s)	679, 811, 909, 1050
EagI	CGGCCG	2 cut(s)	679, 811
Eam1104I	CTCTTC	1 cut(s)	77
EarI	CTCTTC	1 cut(s)	77
EciI	GGCGGA	3 cut(s)	142, 412, 424
Ecl136II	GAGCTC	1 cut(s)	493
EclXI	CGGCCG	2 cut(s)	679, 811
Eco130I	CCWWGG	1 cut(s)	1205
Eco24I	GRGCYC	3 cut(s)	495, 1119, 1323
Eco47I	GGWCC	1 cut(s)	778
Eco52I	CGGCCG	2 cut(s)	679, 811
Eco53kI	GAGCTC	1 cut(s)	493
Eco88I	CYCGRG	4 cut(s)	479, 1118, 1309, 1322
EcoICRI	GAGCTC	1 cut(s)	493
EcoRII	CCWGG	1 cut(s)	774
EcoT14I	CCWWGG	1 cut(s)	1205
EcoT38I	GRGCYC	3 cut(s)	495, 1119, 1323
ErhI	CCWWGG	1 cut(s)	1205
FaeI	CATG	2 cut(s)	286, 868
FaiI	YATR	9 cut(s)	284, 464, 534, 837, 852, 866, 1019, 1038, 1371
FaqI	GGGAC	3 cut(s)	699, 1018, 1439
FatI	CATG	2 cut(s)	282, 864
FauI	CCCGC	6 cut(s)	167, 378, 455, 528, 1080, 1165
Fnu4HI	GCNGC	7 cut(s)	295, 393, 426, 1025, 1028, 1202, 1349
FokI	GGATG	1 cut(s)	1291
FriOI	GRGCYC	3 cut(s)	495, 1119, 1323
Fsp4HI	GCNGC	7 cut(s)	295, 393, 426, 1025, 1028, 1202, 1349
FspBI	CTAG	2 cut(s)	26, 1206
GlaI	GCGC	3 cut(s)	149, 429, 460
GluI	GCNGC	7 cut(s)	295, 393, 426, 1025, 1028, 1202, 1349
GsaI	CCCAGC	3 cut(s)	268, 709, 730
HaeIII	GGCC	8 cut(s)	681, 704, 813, 911, 1052, 1123, 1321, 1328
HgaI	GACGC	1 cut(s)	1148
HhaI	GCGC	3 cut(s)	150, 430, 461
Hin1I	GRCGYC	1 cut(s)	1140
Hin1II	CATG	2 cut(s)	286, 868
Hin6I	GCGC	3 cut(s)	148, 428, 459
HinP1I	GCGC	3 cut(s)	148, 428, 459
HincII	GTYRAC	1 cut(s)	597
HindII	GTYRAC	1 cut(s)	597
HindIII	AAGCTT	2 cut(s)	550, 563
HinfI	GANTC	8 cut(s)	407, 482, 610, 796, 998, 1068, 1165, 1307
Hpy166II	GTNNAC	5 cut(s)	597, 997, 1014, 1081, 1230
Hpy188I	TCNGA	6 cut(s)	499, 572, 618, 789, 825, 1073
Hpy188III	TCNNGA	3 cut(s)	479, 925, 947
Hpy8I	GTNNAC	5 cut(s)	597, 997, 1014, 1081, 1230
Hpy99I	CGWCG	4 cut(s)	548, 607, 1012, 1142
HpyAV	CCTTC	5 cut(s)	250, 334, 338, 373, 1297
HpyCH4III	ACNGT	6 cut(s)	473, 752, 899, 983, 1238, 1292
HpyCH4IV	ACGT	1 cut(s)	1010
HpyCH4V	TGCA	3 cut(s)	333, 1171, 1400
HpyF10VI	GCNNNNNNNGC	6 cut(s)	168, 339, 434, 456, 549, 710
HpyF3I	CTNAG	2 cut(s)	440, 1095
HpySE526I	ACGT	1 cut(s)	1010
Hsp92I	GRCGYC	1 cut(s)	1140
Hsp92II	CATG	2 cut(s)	286, 868
HspAI	GCGC	3 cut(s)	148, 428, 459
Kpn2I	TCCGGA	1 cut(s)	946
KroI	GCCGGC	1 cut(s)	671
KroNI	GCCGGC	1 cut(s)	673
Kzo9I	GATC	2 cut(s)	555, 820
LmnI	GCTCC	7 cut(s)	155, 220, 257, 425, 509, 839, 949
Lsp1109I	GCAGC	4 cut(s)	306, 1039, 1188, 1360
LweI	GCATC	1 cut(s)	14
MaeI	CTAG	2 cut(s)	26, 1206
MaeII	ACGT	1 cut(s)	1010
MaeIII	GTNAC	2 cut(s)	1127, 1162
MalI	GATC	2 cut(s)	557, 822
MbiI	CCGCTC	2 cut(s)	450, 802
MboI	GATC	2 cut(s)	555, 820
MboII	GAAGA	3 cut(s)	64, 605, 1222
MhlI	GDGCHC	4 cut(s)	495, 506, 1119, 1323
MluCI	AATT	3 cut(s)	107, 585, 1339
MlyI	GAGTC	7 cut(s)	401, 491, 805, 992, 1077, 1159, 1301
MmeI	TCCRAC	3 cut(s)	1051, 1256, 1372
MroI	TCCGGA	1 cut(s)	946
MroNI	GCCGGC	1 cut(s)	671
MslI	CAYNNNNRTG	1 cut(s)	863
MspA1I	CMGCKG	1 cut(s)	1030
MspR9I	CCNGG	8 cut(s)	219, 683, 701, 776, 1003, 1114, 1323, 1324
Mva1269I	GAATGC	1 cut(s)	333
MvaI	CCWGG	1 cut(s)	776
MvnI	CGCG	2 cut(s)	148, 428
MwoI	GCNNNNNNNGC	6 cut(s)	168, 339, 434, 456, 549, 710
NaeI	GCCGGC	1 cut(s)	673
NciI	CCSGG	7 cut(s)	219, 683, 701, 1003, 1114, 1323, 1324
NdeII	GATC	2 cut(s)	555, 820
NgoMIV	GCCGGC	1 cut(s)	671
NlaIII	CATG	2 cut(s)	286, 868
NlaIV	GGNNCC	6 cut(s)	253, 311, 945, 1111, 1321, 1327
NmeAIII	GCCGAG	5 cut(s)	228, 630, 789, 1078, 1091
NmuCI	GTSAC	1 cut(s)	1162
PaeR7I	CTCGAG	1 cut(s)	479
PcsI	WCGNNNNNNNCGW	1 cut(s)	816
PctI	GAATGC	1 cut(s)	333
PdiI	GCCGGC	1 cut(s)	673
PfeI	GAWTC	1 cut(s)	610
PflFI	GACNNNGTC	1 cut(s)	302
PfoI	TCCNGGA	2 cut(s)	217, 1001
PkrI	GCNGC	7 cut(s)	296, 394, 427, 1026, 1029, 1203, 1350
PleI	GAGTC	7 cut(s)	401, 490, 804, 992, 1076, 1159, 1301
PpsI	GAGTC	7 cut(s)	401, 490, 804, 992, 1076, 1159, 1301
Psp124BI	GAGCTC	1 cut(s)	495
Psp6I	CCWGG	1 cut(s)	774
PspFI	CCCAGC	3 cut(s)	264, 705, 726
PspGI	CCWGG	1 cut(s)	774
PspN4I	GGNNCC	6 cut(s)	253, 311, 945, 1111, 1321, 1327
PspOMI	GGGCCC	1 cut(s)	1319
PspPI	GGNCC	6 cut(s)	703, 778, 1121, 1319, 1320, 1326
PsrI	GAACNNNNNNTAC	2 cut(s)	1205, 1237
PsyI	GACNNNGTC	1 cut(s)	302
RsaI	GTAC	2 cut(s)	30, 818
RsaNI	GTAC	2 cut(s)	29, 817
RseI	CAYNNNNRTG	1 cut(s)	863
SacI	GAGCTC	1 cut(s)	495
SatI	GCNGC	7 cut(s)	295, 393, 426, 1025, 1028, 1202, 1349
Sau3AI	GATC	2 cut(s)	555, 820
Sau96I	GGNCC	6 cut(s)	703, 778, 1121, 1319, 1320, 1326
ScaI	AGTACT	1 cut(s)	30
SchI	GAGTC	7 cut(s)	401, 491, 805, 992, 1077, 1159, 1301
ScrFI	CCNGG	8 cut(s)	219, 683, 701, 776, 1003, 1114, 1323, 1324
SduI	GDGCHC	4 cut(s)	495, 506, 1119, 1323
SfaNI	GCATC	1 cut(s)	14
Sfr274I	CTCGAG	1 cut(s)	479
SinI	GGWCC	1 cut(s)	778
SlaI	CTCGAG	1 cut(s)	479
SmaI	CCCGGG	1 cut(s)	1324
SmiMI	CAYNNNNRTG	1 cut(s)	863
SmlI	CTYRAG	1 cut(s)	479
SmoI	CTYRAG	1 cut(s)	479
Sse9I	AATT	3 cut(s)	107, 585, 1339
SspMI	CTAG	2 cut(s)	26, 1206
SstI	GAGCTC	1 cut(s)	495
StyD4I	CCNGG	8 cut(s)	217, 681, 699, 774, 1001, 1112, 1321, 1322
StyI	CCWWGG	1 cut(s)	1205
TaaI	ACNGT	6 cut(s)	473, 752, 899, 983, 1238, 1292
TaiI	ACGT	1 cut(s)	1013
TaqI	TCGA	4 cut(s)	327, 480, 966, 1059
TaqII	GACCGA	1 cut(s)	795
TasI	AATT	3 cut(s)	107, 585, 1339
TatI	WGTACW	1 cut(s)	28
TauI	GCSGC	3 cut(s)	395, 428, 1027
TfiI	GAWTC	1 cut(s)	610
TscAI	CASTG	3 cut(s)	145, 1198, 1415
TseFI	GTSAC	1 cut(s)	1162
TseI	GCWGC	4 cut(s)	294, 1027, 1201, 1348
Tsp45I	GTSAC	1 cut(s)	1162
TspDTI	ATGAA	2 cut(s)	1301, 1404
TspGWI	ACGGA	4 cut(s)	561, 591, 1122, 1247
TspMI	CCCGGG	1 cut(s)	1322
TspRI	CASTG	3 cut(s)	145, 1198, 1415
Tth111I	GACNNNGTC	1 cut(s)	302
VpaK11BI	GGWCC	1 cut(s)	778
XhoI	CTCGAG	1 cut(s)	479
XmaI	CCCGGG	1 cut(s)	1322
XmaJI	CCTAGG	1 cut(s)	1205
XspI	CTAG	2 cut(s)	26, 1206
ZrmI	AGTACT	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.