RLG00000016781

Phospholipase D

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Reverse (-)
9920620 .. 9926284
5665 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016781

Sequence Viewer

Length: 2583 bp
ATGGCGGAACCGACGTCGTCGGAGCAGATAATCTATCTGCACGGTGACCTGGACCTCAAAATCATCGAGGCGCGCTACCTGCCCAACATGGACATCGTCTCCGAGCGCCTCCGCCGCTGCTTCACCGCCTGCGACACCATCAACTGCACCGGCTCCCGCTCCGACAATCCCGATGCCGGCCACGGAGCCGAGGACCGCAAGAAGGACCACCACCGCAAAATCATCACCAGTGACTCTTACGTCAGCGTCGTCTTGCCTCAGGCCACGGTGGCGCGTACGCGCGTCATCAAGAACTCGCAGAATCCTCAGTGGGAAGAGTCGTTTTCCATCCCGCTCGCGCATCCCGCCGCTAAGGTTGAGTTTCAGGTCAAAGATAACGACCTCTTCGGCGCTGAGCTTATCGGCACCGCCTCGATCCCCGCCGCCGAAATCGCCTTCGGAAAATCCATTTCCGGCTGGTATCCGATTATCGGACCCACCGGAAAGCCTCCGAAGCCTAATTGCGCTATTTATGTCGAGTTGAAGTTCACTACCTTCGAGAAAAACGAGGCCTACAGGCACGGCATCGCCGGCGATCCAGAACGGAAGGGAGTCCCCAAGACCTACTTCCCTATGAGGAAGGGAAGTCACGTGAGGCTGTACCAGGACGCGCACGTGCCGGAGGGGATGCTGCCGCAGATTGAATTGGACGGAAGGAAGGTTTATAAGCCTGAGAATTGCTGGGAGGACATTTGCTATGCGATTTCGGAGGCTCACCATATGATCTATGTGGTGGGATGGTCTGTGTTTTACAAAGTGAGGCTGGTTAGGGAGCCGAGCCGGAAGTTGCCACGCGGCGGCGATTTGACGCTCGGAGAGTTGCTCAAGTATAAGTCGGAAGAAGGCGTACGGGTTTTGTTGCTGGTCTGGGATGATAAGACCTCCCACGACAAGTTGTTCTTCAAATCGGCAGGAATGATGCAAACTCATGATGAAGAAACCCGGAAGTTTTTCAAGCATTCATCTGTCACTTGTGTTCTGGCCCCTCGCTATGGCAGTAGTAAGCTTAGCATTATGAAACAACAGGTTGTTGGAACCCTCTTTACACACCATCAAAAATGTGTTATTGTGGACACACAAGCATCTGGTAATAACCGCAAGATAACTACATTTTTAGGAGGTCTTGATCTCTGTGATGGTCGTTATGACACACCTGAGCACAGATTGTTTTGTGATCTTGACACTGTGTTTAAAGAAGATTTTCATCAACCTACGTGTGCTGCCGGGAGCAAGGCTCCAAGGCAACCATGGCATGACTTGCACTGTAGAATTGACGGGCCTGCTGCATATGATGTTCTTATAAACTTTGAGCAACGGTGGAGGAAAGCAACACAGTGGAGGGAGTTTGGACTACGTAAAAAAGTTTCGCATTGGCATGATGATGCTTTAATTAAGATAGGCCGTATTTCATGGATACTTAGTCCTCAGATGCCTTCAAAGGAGAAAAAGGAGTTTACAAGTATTCCCGAAGACGACCCAGCTCTATGGGTTCAGGGAGAAGATAATCCTGAAGATTGGCATGTTCAGATTTTCAGGTCTATTGATTCGGGATCACTGAAAGGATTTCCCAAAGATGTCATTGTTGCTGGGTCACAGAACCTTATTTGCTCAAAGGATCTAGTAATAGATAAAAGCATCCAGAAAGCATACATCCATGCAATCAGATCCGCCCAACATTTCATATATATTGAAAATCAGTATTTTCTCGGTTCATCATATGCATGGCCAGATTATAAAAATGCAGGAGCTGACAATCTTATCCCAATGGAGTTGGCACTAAAGATTGCCAGCAAAATTAGAGCTAATGAGAGATTTGCAGTGTATATAGTTCTACCTATGTGGCCTGAAGGTGATCCGAAATCTGGTGCAATGCAAGAAATTCTCTACTGGCAGAGCCAAACAATGCAAATGATGTATCGTGTTGTTGCACGGGAATTGAAAGCCCTGCAGCTTCAGGACTTACATCCTCAAGATTTCCTCAATTTCTATTGCCTTGGTAATCGAGAAAAACTTTCTGAGGAAACATCAAACAACAATGGTGCTACGATCTCCGAATCATACAAGTATCAGCGCTTTATGATTTATGTTCATGCCAAGGGTATGATAGTAGATGATGAGTACGTTATAGTGGGATCTGCCAATATCAACCAAAGATCAATGGCTGGTACAAAAGACACTGAGATAGCTATGGGTGCGTATCAACCCCATCACAGTTGGGCTGAGAAGCAGAGACATCCATGTGGTCAGATACATGGGTATCGAATGTCGCTCTGGGCTGAGCATCTTGGTAGGTTGGACCCGTGCTTCAAAGAGGCAGAGAGTTTGGAATGTGTGAGGAATGTGAATGGCATTGCCAAAGAAAACTGGAGGAGATACACATTGCCGGATTTCACAGAACTGCAGGGTCACCTTCTCAGGTATCCATTGGATGTAGATAGAGATGGTAACGTTGGACCCCTGCCAGGACATGAAAATTTCCCTGATGTTGGTGGCAAAGTTATTGGAGCTCATTCTGCTACACTTCCTGATCAGTTGACAACATAA

Protein Analysis

861

Amino Acids

97.89

Weight (kDa)

6.82

Isoelectric Point (pI)

31.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 74 - 155 1.2e-15 C2 domain
PLDc_2 PF13091 698 - 744 4.9e-07 PLD-like domain
PLDc PF00614 707 - 732 3.1e-08 Phospholipase D Active site motif
PLD_C PF12357 780 - 849 1.7e-27 Phospholipase D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 705, 1340, 1773
AasI GACNNNNNNGTC 1 cut(s) 239
AatII GACGTC 1 cut(s) 17
Acc36I ACCTGC 1 cut(s) 87
AccB1I GGYRCC 1 cut(s) 404
AccBSI CCGCTC 2 cut(s) 159, 334
AccII CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
AclI AACGTT 1 cut(s) 2487
AclWI GGATC 7 cut(s) 409, 569, 1597, 1662, 1698, 1886, 2179
AcoI YGGCCR 2 cut(s) 178, 1763
AcsI RAATTY 2 cut(s) 1917, 2512
AcuI CTGAAG 3 cut(s) 1569, 1905, 1976
AcvI CACGTG 2 cut(s) 631, 655
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 5 cut(s) 277, 641, 888, 2159, 2206
AfeI AGCGCT 1 cut(s) 2111
AfiI CCNNNNNNNGG 8 cut(s) 176, 202, 470, 836, 1031, 1901, 2501, 2525
AflIII ACRYGT 1 cut(s) 1253
AgsI TTSAA 8 cut(s) 523, 683, 943, 994, 1476, 1730, 1978, 2347
AjnI CCWGG 3 cut(s) 48, 642, 2500
AjuI GAANNNNNNNTTGG 2 cut(s) 590, 622
AluBI AGCT 8 cut(s) 397, 1045, 1520, 1787, 1841, 1990, 2225, 2546
AluI AGCT 8 cut(s) 397, 1045, 1520, 1787, 1841, 1990, 2225, 2546
Alw21I GWGCWC 2 cut(s) 1200, 2548
Alw26I GTCTC 2 cut(s) 103, 2263
AlwI GGATC 7 cut(s) 409, 569, 1597, 1662, 1698, 1886, 2179
AlwNI CAGNNNCTG 1 cut(s) 1787
Aor51HI AGCGCT 1 cut(s) 2111
AoxI GGCC 8 cut(s) 178, 261, 549, 1020, 1316, 1438, 1763, 1880
ApeKI GCWGC 5 cut(s) 117, 670, 1259, 1322, 1987
ApoI RAATTY 2 cut(s) 1917, 2512
Asp700I GAANNNNTTC 2 cut(s) 989, 1239
AspS9I GGNCC 8 cut(s) 52, 193, 205, 473, 1021, 1316, 2335, 2492
AsuC2I CCSGG 2 cut(s) 982, 1264
AsuHPI GGTGA 6 cut(s) 56, 115, 217, 746, 1901, 2438
AvaII GGWCC 6 cut(s) 52, 193, 205, 473, 2335, 2492
AxyI CCTNAGG 1 cut(s) 258
BaeI ACNNNNGTAYC 4 cut(s) 2279, 2279, 2312, 2312
BalI TGGCCA 1 cut(s) 1765
BanI GGYRCC 1 cut(s) 404
BanII GRGCYC 1 cut(s) 2548
BarI GAAGNNNNNNTAC 2 cut(s) 870, 902
BbrPI CACGTG 2 cut(s) 631, 655
BbsI GAAGAC 1 cut(s) 1515
Bbv12I GWGCWC 2 cut(s) 1200, 2548
BbvI GCAGC 5 cut(s) 104, 657, 1246, 1309, 1999
BccI CCATC 7 cut(s) 146, 335, 771, 1098, 1169, 2253, 2474
BceAI ACGGC 2 cut(s) 577, 1425
BciT130I CCWGG 3 cut(s) 50, 644, 2502
BciVI GTATCC 3 cut(s) 471, 1446, 2469
BclI TGATCA 1 cut(s) 2566
BcnI CCSGG 2 cut(s) 982, 1264
BcoDI GTCTC 2 cut(s) 103, 2263
BfaI CTAG 1 cut(s) 1658
BfmI CTRYAG 4 cut(s) 553, 1303, 1985, 2438
BfoI RGCGCY 3 cut(s) 109, 393, 2113
BfuAI ACCTGC 1 cut(s) 87
BfuI GTATCC 3 cut(s) 471, 1446, 2469
BglI GCCNNNNNGGC 1 cut(s) 269
BlpI GCTNAGC 3 cut(s) 393, 1046, 2316
Bme1390I CCNGG 5 cut(s) 50, 644, 982, 1264, 2502
Bme18I GGWCC 6 cut(s) 52, 193, 205, 473, 2335, 2492
BmgT120I GGNCC 8 cut(s) 52, 193, 205, 473, 1021, 1316, 2335, 2492
BmrFI CCNGG 5 cut(s) 50, 644, 982, 1264, 2502
BpiI GAAGAC 1 cut(s) 1515
BplI GAGNNNNNCTC 4 cut(s) 846, 878, 1258, 1290
BpmI CTGGAG 1 cut(s) 2425
Bpu10I CCTNAGC 2 cut(s) 351, 1194
Bpu1102I GCTNAGC 3 cut(s) 393, 1046, 2316
BpuEI CTTGAG 2 cut(s) 848, 1992
BpuMI CCSGG 2 cut(s) 982, 1264
BsaAI YACGTR 4 cut(s) 631, 655, 1254, 1394
BsaBI GATNNNNATC 1 cut(s) 1242
BsaHI GRCGYC 1 cut(s) 14
BsaJI CCNNGG 7 cut(s) 181, 189, 264, 1277, 1286, 2032, 2133
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 8 cut(s) 176, 202, 470, 836, 1031, 1901, 2501, 2525
Bse118I RCCGGY 3 cut(s) 149, 176, 569
Bse1I ACTGG 3 cut(s) 228, 1931, 2408
Bse21I CCTNAGG 1 cut(s) 258
Bse3DI GCAATG 3 cut(s) 1914, 2388, 2417
Bse8I GATNNNNATC 1 cut(s) 1242
BseBI CCWGG 3 cut(s) 50, 644, 2502
BseDI CCNNGG 7 cut(s) 181, 189, 264, 1277, 1286, 2032, 2133
BseJI GATNNNNATC 1 cut(s) 1242
BseLI CCNNNNNNNGG 8 cut(s) 176, 202, 470, 836, 1031, 1901, 2501, 2525
BseMI GCAATG 3 cut(s) 1914, 2388, 2417
BseNI ACTGG 3 cut(s) 228, 1931, 2408
BsePI GCGCGC 1 cut(s) 71
BseRI GAGGAG 1 cut(s) 2422
BseXI GCAGC 5 cut(s) 104, 657, 1246, 1309, 1999
BseYI CCCAGC 3 cut(s) 720, 1516, 1625
BsgI GTGCAG 2 cut(s) 23, 130
Bsh1236I CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
BshFI GGCC 8 cut(s) 180, 263, 551, 1022, 1318, 1440, 1765, 1882
BshNI GGYRCC 1 cut(s) 404
BsiHKAI GWGCWC 2 cut(s) 1200, 2548
BsiWI CGTACG 2 cut(s) 275, 886
BslFI GGGAC 1 cut(s) 578
BslI CCNNNNNNNGG 8 cut(s) 176, 202, 470, 836, 1031, 1901, 2501, 2525
BsmAI GTCTC 2 cut(s) 103, 2263
BsmBI CGTCTC 1 cut(s) 103
BsmFI GGGAC 1 cut(s) 578
BsmI GAATGC 1 cut(s) 997
BsnI GGCC 8 cut(s) 180, 263, 551, 1022, 1318, 1440, 1765, 1882
Bsp1286I GDGCHC 2 cut(s) 1200, 2548
Bsp1720I GCTNAGC 3 cut(s) 393, 1046, 2316
Bsp19I CCATGG 1 cut(s) 1286
BspANI GGCC 8 cut(s) 180, 263, 551, 1022, 1318, 1440, 1765, 1882
BspFNI CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
BspHI TCATGA 1 cut(s) 967
BspMAI CTGCAG 2 cut(s) 1989, 2442
BspMI ACCTGC 1 cut(s) 87
BspPI GGATC 7 cut(s) 409, 569, 1597, 1662, 1698, 1886, 2179
BspT107I GGYRCC 1 cut(s) 404
BsrBI CCGCTC 2 cut(s) 159, 334
BsrDI GCAATG 3 cut(s) 1914, 2388, 2417
BsrFI RCCGGY 3 cut(s) 149, 176, 569
BsrI ACTGG 3 cut(s) 228, 1931, 2408
BssAI RCCGGY 3 cut(s) 149, 176, 569
BssECI CCNNGG 7 cut(s) 181, 189, 264, 1277, 1286, 2032, 2133
BssHII GCGCGC 1 cut(s) 71
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 4 cut(s) 1277, 1286, 2032, 2133
Bst2UI CCWGG 3 cut(s) 50, 644, 2502
Bst4CI ACNGT 7 cut(s) 44, 268, 1225, 1304, 1356, 1374, 2252
Bst6I CTCTTC 2 cut(s) 309, 389
BstACI GRCGYC 1 cut(s) 14
BstAPI GCANNNNNTGC 1 cut(s) 1297
BstBAI YACGTR 4 cut(s) 631, 655, 1254, 1394
BstC8I GCNNGC 7 cut(s) 73, 130, 178, 336, 571, 1320, 1828
BstDSI CCRYGG 3 cut(s) 181, 264, 1286
BstEII GGTNACC 2 cut(s) 44, 2444
BstFNI CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
BstH2I RGCGCY 3 cut(s) 109, 393, 2113
BstMAI GTCTC 2 cut(s) 103, 2263
BstNI CCWGG 3 cut(s) 50, 644, 2502
BstNSI RCATGY 1 cut(s) 1562
BstPI GGTNACC 2 cut(s) 44, 2444
BstSCI CCNGG 5 cut(s) 48, 642, 980, 1262, 2500
BstSFI CTRYAG 4 cut(s) 553, 1303, 1985, 2438
BstSNI TACGTA 1 cut(s) 1394
BstUI CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
BstV1I GCAGC 5 cut(s) 104, 657, 1246, 1309, 1999
BstV2I GAAGAC 1 cut(s) 1515
BstX2I RGATCY 3 cut(s) 1654, 1703, 2171
BstXI CCANNNNNNTGG 1 cut(s) 1524
BstYI RGATCY 3 cut(s) 1654, 1703, 2171
Bsu36I CCTNAGG 1 cut(s) 258
BsuI GTATCC 3 cut(s) 471, 1446, 2469
BsuRI GGCC 8 cut(s) 180, 263, 551, 1022, 1318, 1440, 1765, 1882
BtgI CCRYGG 3 cut(s) 181, 264, 1286
BtgZI GCGATG 1 cut(s) 550
BtsI GCAGTG 1 cut(s) 1863
BtsIMutI CAGTG 8 cut(s) 235, 314, 1221, 1300, 1379, 1592, 1863, 2214
BveI ACCTGC 1 cut(s) 87
Cac8I GCNNGC 7 cut(s) 73, 130, 178, 336, 571, 1320, 1828
CaiI CAGNNNCTG 1 cut(s) 1787
CciI TCATGA 1 cut(s) 967
Cfr10I RCCGGY 3 cut(s) 149, 176, 569
Cfr13I GGNCC 8 cut(s) 52, 193, 205, 473, 1021, 1316, 2335, 2492
CseI GACGC 4 cut(s) 235, 271, 656, 856
Csp6I GTAC 5 cut(s) 276, 640, 887, 2158, 2205
CviQI GTAC 5 cut(s) 276, 640, 887, 2158, 2205
DraI TTTAAA 1 cut(s) 1231
DrdI GACNNNNNNGTC 1 cut(s) 239
DseDI GACNNNNNNGTC 1 cut(s) 239
EaeI YGGCCR 2 cut(s) 178, 1763
Eam1104I CTCTTC 2 cut(s) 309, 389
EarI CTCTTC 2 cut(s) 309, 389
EciI GGCGGA 3 cut(s) 20, 101, 1696
Ecl136II GAGCTC 1 cut(s) 2546
Eco105I TACGTA 1 cut(s) 1394
Eco130I CCWWGG 4 cut(s) 1277, 1286, 2032, 2133
Eco147I AGGCCT 1 cut(s) 551
Eco24I GRGCYC 1 cut(s) 2548
Eco47I GGWCC 6 cut(s) 52, 193, 205, 473, 2335, 2492
Eco47III AGCGCT 1 cut(s) 2111
Eco53kI GAGCTC 1 cut(s) 2546
Eco57I CTGAAG 3 cut(s) 1569, 1905, 1976
Eco72I CACGTG 2 cut(s) 631, 655
Eco81I CCTNAGG 1 cut(s) 258
Eco91I GGTNACC 2 cut(s) 44, 2444
EcoICRI GAGCTC 1 cut(s) 2546
EcoO65I GGTNACC 2 cut(s) 44, 2444
EcoRII CCWGG 3 cut(s) 48, 642, 2500
EcoT14I CCWWGG 4 cut(s) 1277, 1286, 2032, 2133
EcoT22I ATGCAT 1 cut(s) 1762
EcoT38I GRGCYC 1 cut(s) 2548
ErhI CCWWGG 4 cut(s) 1277, 1286, 2032, 2133
Esp3I CGTCTC 1 cut(s) 103
FalI AAGNNNNNCTT 4 cut(s) 590, 622, 923, 955
FaqI GGGAC 1 cut(s) 578
FauI CCCGC 4 cut(s) 164, 339, 352, 427
FauNDI CATATG 3 cut(s) 759, 1327, 1756
FbaI TGATCA 1 cut(s) 2566
FriOI GRGCYC 1 cut(s) 2548
FspBI CTAG 1 cut(s) 1658
GsaI CCCAGC 3 cut(s) 724, 1520, 1629
GsuI CTGGAG 1 cut(s) 2425
HaeII RGCGCY 3 cut(s) 109, 393, 2113
HaeIII GGCC 8 cut(s) 180, 263, 551, 1022, 1318, 1440, 1765, 1882
HgaI GACGC 4 cut(s) 235, 271, 656, 856
Hin1I GRCGYC 1 cut(s) 14
HincII GTYRAC 1 cut(s) 2574
HindII GTYRAC 1 cut(s) 2574
HindIII AAGCTT 1 cut(s) 1043
HinfI GANTC 6 cut(s) 233, 301, 317, 591, 1583, 2093
HphI GGTGA 6 cut(s) 56, 115, 217, 746, 1901, 2438
Hpy166II GTNNAC 4 cut(s) 528, 1111, 1494, 2574
Hpy8I GTNNAC 4 cut(s) 528, 1111, 1494, 2574
Hpy99I CGWCG 4 cut(s) 16, 19, 22, 251
HpyCH4III ACNGT 7 cut(s) 44, 268, 1225, 1304, 1356, 1374, 2252
HpyCH4IV ACGT 8 cut(s) 14, 240, 630, 654, 1253, 1393, 2160, 2487
HpySE526I ACGT 8 cut(s) 14, 240, 630, 654, 1253, 1393, 2160, 2487
Hsp92I GRCGYC 1 cut(s) 14
KroI GCCGGC 2 cut(s) 176, 569
KroNI GCCGGC 2 cut(s) 178, 571
Ksp22I TGATCA 1 cut(s) 2566
LmnI GCTCC 9 cut(s) 22, 158, 164, 185, 811, 1266, 1279, 1784, 2543
Lsp1109I GCAGC 5 cut(s) 104, 657, 1246, 1309, 1999
MaeI CTAG 1 cut(s) 1658
MaeII ACGT 8 cut(s) 14, 240, 630, 654, 1253, 1393, 2160, 2487
MaeIII GTNAC 7 cut(s) 44, 230, 626, 1006, 1629, 2444, 2483
MbiI CCGCTC 2 cut(s) 159, 334
MboII GAAGA 9 cut(s) 326, 376, 890, 931, 986, 1247, 1520, 1550, 1562
MflI RGATCY 3 cut(s) 1654, 1703, 2171
MhlI GDGCHC 2 cut(s) 1200, 2548
MlsI TGGCCA 1 cut(s) 1765
MluNI TGGCCA 1 cut(s) 1765
MlyI GAGTC 3 cut(s) 227, 326, 600
MmeI TCCRAC 5 cut(s) 186, 855, 1051, 2313, 2470
Mox20I TGGCCA 1 cut(s) 1765
Mph1103I ATGCAT 1 cut(s) 1762
MreI CGCCGGCG 1 cut(s) 569
MroNI GCCGGC 2 cut(s) 176, 569
MroXI GAANNNNTTC 2 cut(s) 989, 1239
MscI TGGCCA 1 cut(s) 1765
MseI TTAA 3 cut(s) 1230, 1427, 1431
MslI CAYNNNNRTG 4 cut(s) 1413, 1419, 1759, 2277
Msp20I TGGCCA 1 cut(s) 1765
MspA1I CMGCKG 1 cut(s) 117
MspR9I CCNGG 5 cut(s) 50, 644, 982, 1264, 2502
Mva1269I GAATGC 1 cut(s) 997
MvaI CCWGG 3 cut(s) 50, 644, 2502
MvnI CGCG 7 cut(s) 73, 274, 280, 282, 338, 650, 834
NaeI GCCGGC 2 cut(s) 178, 571
NciI CCSGG 2 cut(s) 982, 1264
NcoI CCATGG 1 cut(s) 1286
NdeI CATATG 3 cut(s) 759, 1327, 1756
NgoMIV GCCGGC 2 cut(s) 176, 569
NmeAIII GCCGAG 2 cut(s) 214, 840
NmuCI GTSAC 6 cut(s) 44, 230, 626, 1006, 1629, 2444
NsiI ATGCAT 1 cut(s) 1762
NspI RCATGY 1 cut(s) 1562
PacI TTAATTAA 1 cut(s) 1431
PagI TCATGA 1 cut(s) 967
PauI GCGCGC 1 cut(s) 71
PceI AGGCCT 1 cut(s) 551
PcsI WCGNNNNNNNCGW 2 cut(s) 246, 543
PctI GAATGC 1 cut(s) 997
PdiI GCCGGC 2 cut(s) 178, 571
PdmI GAANNNNTTC 2 cut(s) 989, 1239
PfeI GAWTC 3 cut(s) 301, 1583, 2093
Pfl23II CGTACG 2 cut(s) 275, 886
PflFI GACNNNGTC 2 cut(s) 16, 95
PleI GAGTC 3 cut(s) 227, 325, 599
PmaCI CACGTG 2 cut(s) 631, 655
PmlI CACGTG 2 cut(s) 631, 655
PpsI GAGTC 3 cut(s) 227, 325, 599
Ppu21I YACGTR 4 cut(s) 631, 655, 1254, 1394
PsiI TTATAA 3 cut(s) 705, 1340, 1773
Psp124BI GAGCTC 1 cut(s) 2548
Psp1406I AACGTT 1 cut(s) 2487
Psp6I CCWGG 3 cut(s) 48, 642, 2500
PspCI CACGTG 2 cut(s) 631, 655
PspEI GGTNACC 2 cut(s) 44, 2444
PspFI CCCAGC 3 cut(s) 720, 1516, 1625
PspGI CCWGG 3 cut(s) 48, 642, 2500
PspLI CGTACG 2 cut(s) 275, 886
PspPI GGNCC 8 cut(s) 52, 193, 205, 473, 1021, 1316, 2335, 2492
PsrI GAACNNNNNNTAC 2 cut(s) 1066, 1098
PstI CTGCAG 2 cut(s) 1989, 2442
PstNI CAGNNNCTG 1 cut(s) 1787
PsuI RGATCY 3 cut(s) 1654, 1703, 2171
PsyI GACNNNGTC 2 cut(s) 16, 95
PteI GCGCGC 1 cut(s) 71
RsaI GTAC 5 cut(s) 277, 641, 888, 2159, 2206
RsaNI GTAC 5 cut(s) 276, 640, 887, 2158, 2205
RseI CAYNNNNRTG 4 cut(s) 1413, 1419, 1759, 2277
SacI GAGCTC 1 cut(s) 2548
SaqAI TTAA 3 cut(s) 1230, 1427, 1431
Sau96I GGNCC 8 cut(s) 52, 193, 205, 473, 1021, 1316, 2335, 2492
SchI GAGTC 3 cut(s) 227, 326, 600
ScrFI CCNGG 5 cut(s) 50, 644, 982, 1264, 2502
SduI GDGCHC 2 cut(s) 1200, 2548
SfcI CTRYAG 4 cut(s) 553, 1303, 1985, 2438
SgrAI CRCCGGYG 1 cut(s) 569
SinI GGWCC 6 cut(s) 52, 193, 205, 473, 2335, 2492
SmiMI CAYNNNNRTG 4 cut(s) 1413, 1419, 1759, 2277
SmlI CTYRAG 2 cut(s) 863, 2007
SmoI CTYRAG 2 cut(s) 863, 2007
SnaBI TACGTA 1 cut(s) 1394
SseBI AGGCCT 1 cut(s) 551
SspMI CTAG 1 cut(s) 1658
SstI GAGCTC 1 cut(s) 2548
StuI AGGCCT 1 cut(s) 551
StyD4I CCNGG 5 cut(s) 48, 642, 980, 1262, 2500
StyI CCWWGG 4 cut(s) 1277, 1286, 2032, 2133
TaaI ACNGT 7 cut(s) 44, 268, 1225, 1304, 1356, 1374, 2252
TaiI ACGT 8 cut(s) 17, 243, 633, 657, 1256, 1396, 2163, 2490
TaqI TCGA 6 cut(s) 66, 413, 516, 537, 2041, 2299
TauI GCSGC 6 cut(s) 117, 350, 425, 676, 837, 840
TfiI GAWTC 3 cut(s) 301, 1583, 2093
Tru1I TTAA 3 cut(s) 1230, 1427, 1431
Tru9I TTAA 3 cut(s) 1230, 1427, 1431
TscAI CASTG 8 cut(s) 235, 314, 1228, 1307, 1379, 1599, 1863, 2221
TseFI GTSAC 6 cut(s) 44, 230, 626, 1006, 1629, 2444
TseI GCWGC 5 cut(s) 117, 670, 1259, 1322, 1987
Tsp45I GTSAC 6 cut(s) 44, 230, 626, 1006, 1629, 2444
TspDTI ATGAA 9 cut(s) 987, 990, 1070, 1232, 1437, 1708, 1740, 2117, 2523
TspGWI ACGGA 3 cut(s) 198, 598, 705
TspRI CASTG 8 cut(s) 235, 314, 1228, 1307, 1379, 1599, 1863, 2221
Tth111I GACNNNGTC 2 cut(s) 16, 95
VpaK11BI GGWCC 6 cut(s) 52, 193, 205, 473, 2335, 2492
XapI RAATTY 2 cut(s) 1917, 2512
XceI RCATGY 1 cut(s) 1562
XcmI CCANNNNNNNNNTGG 1 cut(s) 1284
XmnI GAANNNNTTC 2 cut(s) 989, 1239
XspI CTAG 1 cut(s) 1658
ZraI GACGTC 1 cut(s) 15
Zsp2I ATGCAT 1 cut(s) 1762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.