Rw7G028850

phospholipase D

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
39684719 .. 39713380
28662 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G028850.1

Sequence Viewer

Length: 2439 bp
ATGGGGAATGAGGATCACCATGAATCTCCAACCCCAACAAATGAAGGTGAGAGTTCTAAAGAACATATTATCCTGCATGGTGAGCTAGATTTATGGATTATAGAAGCTAAATCTCTTCCAAATATGGATTTACCATCAGAAAGAATGAGAAAGTGTTTTACCATGTTTGGAACTTGCTCTGCTCCTTTTGGAAATCGGTCTACTACTAAAGCTCTTTCTGGAAAACGGCCTGCAGCTATTACAAGTGACCCTTATGTTTCTGTTTGCCTAGCAGGAGCTACTGTAGCTCAGACTAGAGTAATTTCAAATAGTGAAAATCCCTCATGGGAAGAACATTTTTGTGTGCCTGTTGCTCACCCTATTATGAAGGTGGAGTTTCATGTTAAGGATAATGATGTTCTTGGAGCTGAACTTATTGGAGTAGTTGAGATATCTGTTGATAAAATCATTTCGGGAAATACAATTAATGATTGGTTTCCCATCATTGGTAATCTCGGAAATTGCTTGAAACCTTTTCCTGAATTGCATGTTTCTGTTCAGTTTAAGCCAGTTGAAAACAACCCTCTATATAAGAATGGTGTTGGTGTCGGGCCAGAATATAAAGGAGTTCCTAATACATATTTTCCACTTCGCAAGGGAGGGAGTGTCACTTTATATCAAGATGCTCATGTACCTAATGATATGTTACCTGAAATTTTACTAGATGGTGGTACAGTTTTTCAGCAAAGAAAATGTTGGGAAGAAATATGTCACGCTATTTTGGAAGCTCAACATCTTATATATATTATAGGGTGGTCTGTATACCATCGTGTCAAGCTTGTAAGGGAACCAACAAAGCCACTACCCTCCGGAGGAGAAATGGAACTCGGAGAGTTGCTAAAATATAAGTCGCAAGAAGGGATCCGCGTTGTTTTGTTAATTTGGGATGATAAAACTTCGCACGACAAGTTTCTATTGAAAACAGAAGGTGTCATGGCAACACATGATGAGGAAACAAAAAAGTTTTTCAAACATTCTAGTGTTCATTGTGTGCTTTCTCCTCGTTATGCAAGCAATAAGCTTAGCATTTTCAAGCAACAGGTTGTGGGAACTCTTTTTACGCATCATCAGAAGTGTGTGATTCTTGACACAGCTTCTGGGAGTAACAGGAAAATAACTGCTTTCATTGGTGGTCTTGATTTATGTGATGGCCGATATGATACTCCTGAGCATAGACTATTTCGTGAACTTGACACAGTCTTTGAAAATGATATTCATAACCCTACATTTCCTACGAACACTCATGGCCCAAGAGAACCTTGGCATGATTTACATTGTAAAGTTGAGGGTCCTGCTGCATATGATATACTAACAAATTTTGAGCAAAGATGGAAAAAAGCGAAAAAGCGTGACTTCAAATTGAAAAAAGTCACTAATAAGCATGATGATGCCTTGATAAGGTTAGATCGCGTCTCATGGATAGTCACTCCAACTTCTGATCATAATGGTGATGAAAAAGTGCGTGTTAGCAATGAAGAAGATCGTGAAAACTGGCATGTACAGATATTCAGGTCAATAGATTCAGGCTCTGTGAAGGGGTTTCCAAAAGGTGTCCAAGATGCTGAGGTTCAGGTTAGAACTAGTGCAGATAACTTGGTCCCAATGGAATTAGCTCTGAAAATAGCTAGCAAAATCAAGGCAAATGAACGTTTCTCAGTGTATATAGTAATACCTATGTGGCCGGAAGGTGTTCCAACTACCTCATCTGTTCAAGAAATTTTATACTGGCAGGCACAAACAATGAGTATGATGTACAAGATTGTTACAAATGCCCTTAAAGATGCAGGCCTTTCTGATCAGTATCATCCACAAGATTATTTGAACTTTTACTGTCTTGGTAAGCGTGAACCTCCATCTTCGAAAGGTTCATCTGAAGCTAATCAGTCATTTGACAATCGTACCTTGGCATCAGCCCAAAAGTTTCGTCGGTTTATGATCTATGTTCATGCCAAAGGAATGATTGTTGATGATGAGTTTGTAATCATGGGTTCTGCAAATATTAACCAAAGATCAATGGATGGTTCAAGGGACACAGAAATTGCTATGGGTGCTTACCAACCACACCATACATGGGTAGCTCTAAAAAATCTTCATCCACATGGCCAGGTATATGGTTACCGAATGTCTCTTTGGGCTGAGCACCTCGGTGGAGTTGAGGATACTTTTAAAGACCCTGAAAGCCTTGAATGCACTAAGCGTGTTTGTGAGATTGCCAAACAAAACTGGAATCAATTTGTAGCCCAAGAGCATCGGGAGTTGAAGGGACACTTGATGCAGTACCCAATTCAAATTGGTAGAGATGGAAATGTGTCTTCCATACCAGGAATTGAATCATTTCCTGATGTTGGTGGGAAAATTCTCGGGGCACCCACCAATCTTCCTGATGTTCTAACAACATAA

Protein Analysis

812

Amino Acids

91.59

Weight (kDa)

6.31

Isoelectric Point (pI)

33.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 28 - 160 1.9e-16 C2 domain
PLDc_2 PF13091 566 - 694 3.2e-07 PLD-like domain
PLDc PF00614 659 - 684 3.9e-06 Phospholipase D Active site motif
PLD_C PF12357 732 - 802 9.8e-28 Phospholipase D C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 2404
AccI GTMKAC 2 cut(s) 200, 801
AccII CGCG 2 cut(s) 906, 1449
AccIII TCCGGA 1 cut(s) 848
AciI CCGC 1 cut(s) 904
AclI AACGTT 1 cut(s) 1687
AclWI GGATC 3 cut(s) 21, 895, 908
AcoI YGGCCR 3 cut(s) 1189, 1718, 2140
AcsI RAATTY 4 cut(s) 693, 1354, 1755, 2394
AcuI CTGAAG 1 cut(s) 1932
AfaI GTAC 6 cut(s) 672, 712, 1539, 1793, 1939, 2318
AfiI CCNNNNNNNGG 5 cut(s) 485, 851, 1437, 2110, 2384
AhlI ACTAGT 1 cut(s) 1619
AjnI CCWGG 2 cut(s) 2142, 2359
AjuI GAANNNNNNNTTGG 2 cut(s) 2152, 2184
AleI CACNNNNGTG 1 cut(s) 2184
AloI GAACNNNNNNTCC 2 cut(s) 54, 86
Alw21I GWGCWC 1 cut(s) 2181
Alw26I GTCTC 2 cut(s) 1456, 2169
AlwI GGATC 3 cut(s) 21, 895, 908
AlwNI CAGNNNCTG 2 cut(s) 1136, 1568
Ama87I CYCGRG 1 cut(s) 2399
Aor13HI TCCGGA 1 cut(s) 848
AoxI GGCC 7 cut(s) 227, 590, 1189, 1285, 1718, 1825, 2140
ApeKI GCWGC 2 cut(s) 233, 1334
ApoI RAATTY 4 cut(s) 693, 1354, 1755, 2394
ArsI GACNNNNNNTTYG 4 cut(s) 1223, 1255, 1948, 1980
AseI ATTAAT 1 cut(s) 465
Asp700I GAANNNNTTC 2 cut(s) 1728, 2373
AspS9I GGNCC 4 cut(s) 590, 1286, 1328, 1636
AsuHPI GGTGA 5 cut(s) 8, 59, 92, 347, 1499
AsuII TTCGAA 1 cut(s) 1898
AsuNHI GCTAGC 1 cut(s) 1664
AvaI CYCGRG 1 cut(s) 2399
AvaII GGWCC 2 cut(s) 1328, 1636
BaeGI GKGCMC 1 cut(s) 2407
BaeI ACNNNNGTAYC 2 cut(s) 1921, 1954
BalI TGGCCA 1 cut(s) 2142
BamHI GGATCC 1 cut(s) 900
BanI GGYRCC 1 cut(s) 2404
BbsI GAAGAC 1 cut(s) 2343
Bbv12I GWGCWC 1 cut(s) 2181
BbvCI CCTCAGC 1 cut(s) 1602
BbvI GCAGC 2 cut(s) 245, 1321
BccI CCATC 9 cut(s) 142, 488, 698, 813, 1181, 1362, 1900, 2051, 2333
BceAI ACGGC 1 cut(s) 242
BciT130I CCWGG 2 cut(s) 2144, 2361
BciVI GTATCC 1 cut(s) 2191
BclI TGATCA 2 cut(s) 1477, 1834
BcoDI GTCTC 2 cut(s) 1456, 2169
BcuI ACTAGT 1 cut(s) 1619
BfaI CTAG 7 cut(s) 86, 269, 294, 701, 1017, 1620, 1665
BfmI CTRYAG 2 cut(s) 231, 282
BfuI GTATCC 1 cut(s) 2191
BisI GCNGC 2 cut(s) 234, 1335
BlpI GCTNAGC 2 cut(s) 1061, 2175
BlsI GCNGC 2 cut(s) 235, 1336
Bme1390I CCNGG 2 cut(s) 2144, 2361
Bme18I GGWCC 2 cut(s) 1328, 1636
BmeT110I CYCGRG 1 cut(s) 2399
BmgT120I GGNCC 4 cut(s) 590, 1286, 1328, 1636
BmiI GGNNCC 5 cut(s) 828, 902, 1329, 1638, 2406
BmrFI CCNGG 2 cut(s) 2144, 2361
BmsI GCATC 8 cut(s) 652, 1111, 1417, 1588, 1810, 1955, 2296, 2301
BmtI GCTAGC 1 cut(s) 1668
BpiI GAAGAC 1 cut(s) 2343
Bpu10I CCTNAGC 2 cut(s) 1206, 1602
Bpu1102I GCTNAGC 2 cut(s) 1061, 2175
Bpu14I TTCGAA 1 cut(s) 1898
BsaBI GATNNNNATC 1 cut(s) 1839
BsaJI CCNNGG 3 cut(s) 1298, 1941, 2182
BsaWI WCCGGW 1 cut(s) 848
BsaXI ACNNNNNCTCC 4 cut(s) 267, 297, 630, 660
Bsc4I CCNNNNNNNGG 5 cut(s) 485, 851, 1437, 2110, 2384
Bse1I ACTGG 4 cut(s) 548, 1535, 1769, 2267
Bse3DI GCAATG 1 cut(s) 1516
Bse8I GATNNNNATC 1 cut(s) 1839
BseAI TCCGGA 1 cut(s) 848
BseBI CCWGG 2 cut(s) 2144, 2361
BseDI CCNNGG 3 cut(s) 1298, 1941, 2182
BseGI GGATG 4 cut(s) 931, 1843, 2062, 2131
BseJI GATNNNNATC 1 cut(s) 1839
BseLI CCNNNNNNNGG 5 cut(s) 485, 851, 1437, 2110, 2384
BseMI GCAATG 1 cut(s) 1516
BseMII CTCAG 5 cut(s) 302, 1197, 1593, 1707, 2166
BseNI ACTGG 4 cut(s) 548, 1535, 1769, 2267
BseRI GAGGAG 2 cut(s) 867, 1029
BseSI GKGCMC 1 cut(s) 2407
BseXI GCAGC 2 cut(s) 245, 1321
BsgI GTGCAG 1 cut(s) 1644
Bsh1236I CGCG 2 cut(s) 906, 1449
BshFI GGCC 7 cut(s) 229, 592, 1191, 1287, 1720, 1827, 2142
BshNI GGYRCC 1 cut(s) 2404
BsiHKAI GWGCWC 1 cut(s) 2181
BsiHKCI CYCGRG 1 cut(s) 2399
BsiSI CCGG 2 cut(s) 849, 1721
BslFI GGGAC 3 cut(s) 1622, 2081, 2316
BslI CCNNNNNNNGG 5 cut(s) 485, 851, 1437, 2110, 2384
BsmAI GTCTC 2 cut(s) 1456, 2169
BsmBI CGTCTC 1 cut(s) 1456
BsmFI GGGAC 3 cut(s) 1622, 2081, 2316
BsmI GAATGC 1 cut(s) 2231
BsnI GGCC 7 cut(s) 229, 592, 1191, 1287, 1720, 1827, 2142
BsoBI CYCGRG 1 cut(s) 2399
Bsp119I TTCGAA 1 cut(s) 1898
Bsp1286I GDGCHC 2 cut(s) 2181, 2407
Bsp13I TCCGGA 1 cut(s) 848
Bsp1407I TGTACA 2 cut(s) 1537, 1791
Bsp143I GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
Bsp1720I GCTNAGC 2 cut(s) 1061, 2175
BspACI CCGC 1 cut(s) 904
BspANI GGCC 7 cut(s) 229, 592, 1191, 1287, 1720, 1827, 2142
BspCNI CTCAG 5 cut(s) 301, 1198, 1594, 1706, 2167
BspEI TCCGGA 1 cut(s) 848
BspFNI CGCG 2 cut(s) 906, 1449
BspLI GGNNCC 5 cut(s) 828, 902, 1329, 1638, 2406
BspMAI CTGCAG 1 cut(s) 235
BspOI GCTAGC 1 cut(s) 1668
BspPI GGATC 3 cut(s) 21, 895, 908
BspT104I TTCGAA 1 cut(s) 1898
BspT107I GGYRCC 1 cut(s) 2404
BsrDI GCAATG 1 cut(s) 1516
BsrGI TGTACA 2 cut(s) 1537, 1791
BsrI ACTGG 4 cut(s) 548, 1535, 1769, 2267
BssECI CCNNGG 3 cut(s) 1298, 1941, 2182
BssMI GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
BssNAI GTATAC 1 cut(s) 802
BssT1I CCWWGG 2 cut(s) 1298, 1941
Bst1107I GTATAC 1 cut(s) 802
Bst2UI CCWGG 2 cut(s) 2144, 2361
Bst4CI ACNGT 4 cut(s) 283, 715, 1237, 1871
Bst6I CTCTTC 1 cut(s) 120
BstAUI TGTACA 2 cut(s) 1537, 1791
BstBI TTCGAA 1 cut(s) 1898
BstC8I GCNNGC 5 cut(s) 231, 1051, 1666, 1770, 1825
BstDEI CTNAG 7 cut(s) 288, 1061, 1206, 1602, 1693, 2175, 2232
BstEII GGTNACC 1 cut(s) 2153
BstENI CCTNNNNNAGG 1 cut(s) 1435
BstF5I GGATG 4 cut(s) 931, 1843, 2062, 2131
BstFNI CGCG 2 cut(s) 906, 1449
BstKTI GATC 8 cut(s) 16, 903, 1447, 1480, 1522, 1837, 1977, 2051
BstMAI GTCTC 2 cut(s) 1456, 2169
BstMBI GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
BstMWI GCNNNNNNNGC 4 cut(s) 82, 284, 2087, 2226
BstNI CCWGG 2 cut(s) 2144, 2361
BstNSI RCATGY 2 cut(s) 530, 1538
BstPI GGTNACC 1 cut(s) 2153
BstSCI CCNGG 2 cut(s) 2142, 2359
BstSFI CTRYAG 2 cut(s) 231, 282
BstSLI GKGCMC 1 cut(s) 2407
BstUI CGCG 2 cut(s) 906, 1449
BstV1I GCAGC 2 cut(s) 245, 1321
BstV2I GAAGAC 1 cut(s) 2343
BstX2I RGATCY 1 cut(s) 900
BstXI CCANNNNNNTGG 1 cut(s) 2150
BstYI RGATCY 1 cut(s) 900
BstZ17I GTATAC 1 cut(s) 802
BsuI GTATCC 1 cut(s) 2191
BsuRI GGCC 7 cut(s) 229, 592, 1191, 1287, 1720, 1827, 2142
BtsCI GGATG 4 cut(s) 931, 1843, 2062, 2131
BtsIMutI CAGTG 1 cut(s) 1701
Cac8I GCNNGC 5 cut(s) 231, 1051, 1666, 1770, 1825
CaiI CAGNNNCTG 2 cut(s) 1136, 1568
Cfr13I GGNCC 4 cut(s) 590, 1286, 1328, 1636
CseI GACGC 1 cut(s) 1438
Csp6I GTAC 6 cut(s) 671, 711, 1538, 1792, 1938, 2317
CviQI GTAC 6 cut(s) 671, 711, 1538, 1792, 1938, 2317
DdeI CTNAG 7 cut(s) 288, 1061, 1206, 1602, 1693, 2175, 2232
DpnI GATC 8 cut(s) 15, 902, 1446, 1479, 1521, 1836, 1976, 2050
DpnII GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
DraI TTTAAA 1 cut(s) 2206
EaeI YGGCCR 3 cut(s) 1189, 1718, 2140
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
Eco130I CCWWGG 2 cut(s) 1298, 1941
Eco147I AGGCCT 1 cut(s) 1827
Eco32I GATATC 1 cut(s) 432
Eco47I GGWCC 2 cut(s) 1328, 1636
Eco57I CTGAAG 1 cut(s) 1932
Eco88I CYCGRG 1 cut(s) 2399
Eco91I GGTNACC 1 cut(s) 2153
EcoNI CCTNNNNNAGG 1 cut(s) 1435
EcoO109I RGGNCCY 1 cut(s) 1328
EcoO65I GGTNACC 1 cut(s) 2153
EcoRII CCWGG 2 cut(s) 2142, 2359
EcoRV GATATC 1 cut(s) 432
EcoT14I CCWWGG 2 cut(s) 1298, 1941
ErhI CCWWGG 2 cut(s) 1298, 1941
Esp3I CGTCTC 1 cut(s) 1456
FalI AAGNNNNNCTT 8 cut(s) 235, 267, 1282, 1314, 1376, 1408, 2291, 2323
FaqI GGGAC 3 cut(s) 1622, 2081, 2316
FauNDI CATATG 1 cut(s) 1339
FbaI TGATCA 2 cut(s) 1477, 1834
FblI GTMKAC 2 cut(s) 200, 801
Fnu4HI GCNGC 2 cut(s) 234, 1335
FokI GGATG 4 cut(s) 938, 1830, 2069, 2118
Fsp4HI GCNGC 2 cut(s) 234, 1335
FspBI CTAG 7 cut(s) 86, 269, 294, 701, 1017, 1620, 1665
GluI GCNGC 2 cut(s) 234, 1335
HaeIII GGCC 7 cut(s) 229, 592, 1191, 1287, 1720, 1827, 2142
HapII CCGG 2 cut(s) 849, 1721
HgaI GACGC 1 cut(s) 1438
HindIII AAGCTT 2 cut(s) 815, 1058
HinfI GANTC 5 cut(s) 23, 1120, 1559, 2266, 2369
HpaII CCGG 2 cut(s) 849, 1721
HphI GGTGA 5 cut(s) 8, 59, 92, 347, 1499
Hpy166II GTNNAC 4 cut(s) 201, 802, 1226, 1886
Hpy188I TCNGA 9 cut(s) 139, 291, 497, 869, 1110, 1477, 1656, 1834, 1912
Hpy8I GTNNAC 4 cut(s) 201, 802, 1226, 1886
Hpy99I CGWCG 1 cut(s) 1968
HpyAV CCTTC 7 cut(s) 38, 361, 890, 959, 1567, 1718, 2293
HpyCH4III ACNGT 4 cut(s) 283, 715, 1237, 1871
HpyCH4IV ACGT 1 cut(s) 1687
HpyF10VI GCNNNNNNNGC 4 cut(s) 82, 284, 2087, 2226
HpyF3I CTNAG 7 cut(s) 288, 1061, 1206, 1602, 1693, 2175, 2232
HpySE526I ACGT 1 cut(s) 1687
Kpn2I TCCGGA 1 cut(s) 848
Ksp22I TGATCA 2 cut(s) 1477, 1834
Kzo9I GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
LmnI GCTCC 3 cut(s) 187, 275, 404
Lsp1109I GCAGC 2 cut(s) 245, 1321
LweI GCATC 8 cut(s) 652, 1111, 1417, 1588, 1810, 1955, 2296, 2301
MaeI CTAG 7 cut(s) 86, 269, 294, 701, 1017, 1620, 1665
MaeII ACGT 1 cut(s) 1687
MalI GATC 8 cut(s) 15, 902, 1446, 1479, 1521, 1836, 1976, 2050
MboI GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
MboII GAAGA 9 cut(s) 107, 341, 752, 1526, 1529, 1887, 2120, 2343, 2408
MflI RGATCY 1 cut(s) 900
MhlI GDGCHC 2 cut(s) 2181, 2407
MlsI TGGCCA 1 cut(s) 2142
MluNI TGGCCA 1 cut(s) 2142
MmeI TCCRAC 3 cut(s) 53, 1493, 1757
Mox20I TGGCCA 1 cut(s) 2142
MroI TCCGGA 1 cut(s) 848
MroXI GAANNNNTTC 2 cut(s) 1728, 2373
MscI TGGCCA 1 cut(s) 2142
MseI TTAA 7 cut(s) 384, 465, 543, 917, 1815, 2040, 2205
MslI CAYNNNNRTG 6 cut(s) 339, 1017, 1425, 1485, 2136, 2184
Msp20I TGGCCA 1 cut(s) 2142
MspI CCGG 2 cut(s) 849, 1721
MspR9I CCNGG 2 cut(s) 2144, 2361
Mva1269I GAATGC 1 cut(s) 2231
MvaI CCWGG 2 cut(s) 2144, 2361
MvnI CGCG 2 cut(s) 906, 1449
MwoI GCNNNNNNNGC 4 cut(s) 82, 284, 2087, 2226
NdeI CATATG 1 cut(s) 1339
NdeII GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
NheI GCTAGC 1 cut(s) 1664
NlaIV GGNNCC 5 cut(s) 828, 902, 1329, 1638, 2406
NmuCI GTSAC 6 cut(s) 245, 646, 749, 1388, 1408, 1462
NspI RCATGY 2 cut(s) 530, 1538
NspV TTCGAA 1 cut(s) 1898
OliI CACNNNNGTG 1 cut(s) 2184
PceI AGGCCT 1 cut(s) 1827
PctI GAATGC 1 cut(s) 2231
PdmI GAANNNNTTC 2 cut(s) 1728, 2373
PfeI GAWTC 5 cut(s) 23, 1120, 1559, 2266, 2369
PflFI GACNNNGTC 1 cut(s) 1235
PkrI GCNGC 2 cut(s) 235, 1336
PpuMI RGGWCCY 1 cut(s) 1328
PshBI ATTAAT 1 cut(s) 465
Psp1406I AACGTT 1 cut(s) 1687
Psp5II RGGWCCY 1 cut(s) 1328
Psp6I CCWGG 2 cut(s) 2142, 2359
PspEI GGTNACC 1 cut(s) 2153
PspGI CCWGG 2 cut(s) 2142, 2359
PspN4I GGNNCC 5 cut(s) 828, 902, 1329, 1638, 2406
PspPI GGNCC 4 cut(s) 590, 1286, 1328, 1636
PspPPI RGGWCCY 1 cut(s) 1328
PsrI GAACNNNNNNTAC 2 cut(s) 1081, 1113
PstI CTGCAG 1 cut(s) 235
PstNI CAGNNNCTG 2 cut(s) 1136, 1568
PsuI RGATCY 1 cut(s) 900
PsyI GACNNNGTC 1 cut(s) 1235
RsaI GTAC 6 cut(s) 672, 712, 1539, 1793, 1939, 2318
RsaNI GTAC 6 cut(s) 671, 711, 1538, 1792, 1938, 2317
RseI CAYNNNNRTG 6 cut(s) 339, 1017, 1425, 1485, 2136, 2184
SaqAI TTAA 7 cut(s) 384, 465, 543, 917, 1815, 2040, 2205
SatI GCNGC 2 cut(s) 234, 1335
Sau3AI GATC 8 cut(s) 13, 900, 1444, 1477, 1519, 1834, 1974, 2048
Sau96I GGNCC 4 cut(s) 590, 1286, 1328, 1636
ScrFI CCNGG 2 cut(s) 2144, 2361
SduI GDGCHC 2 cut(s) 2181, 2407
SfaNI GCATC 8 cut(s) 652, 1111, 1417, 1588, 1810, 1955, 2296, 2301
SfcI CTRYAG 2 cut(s) 231, 282
SfuI TTCGAA 1 cut(s) 1898
SinI GGWCC 2 cut(s) 1328, 1636
SmiMI CAYNNNNRTG 6 cut(s) 339, 1017, 1425, 1485, 2136, 2184
SpeI ACTAGT 1 cut(s) 1619
SseBI AGGCCT 1 cut(s) 1827
SsiI CCGC 1 cut(s) 904
SspI AATATT 1 cut(s) 2038
SspMI CTAG 7 cut(s) 86, 269, 294, 701, 1017, 1620, 1665
StuI AGGCCT 1 cut(s) 1827
StyD4I CCNGG 2 cut(s) 2142, 2359
StyI CCWWGG 2 cut(s) 1298, 1941
TaaI ACNGT 4 cut(s) 283, 715, 1237, 1871
TaiI ACGT 1 cut(s) 1690
TaqI TCGA 1 cut(s) 1898
TaqII GACCGA 1 cut(s) 186
TatI WGTACW 2 cut(s) 1537, 1791
TfiI GAWTC 5 cut(s) 23, 1120, 1559, 2266, 2369
Tru1I TTAA 7 cut(s) 384, 465, 543, 917, 1815, 2040, 2205
Tru9I TTAA 7 cut(s) 384, 465, 543, 917, 1815, 2040, 2205
TscAI CASTG 1 cut(s) 1701
TseFI GTSAC 6 cut(s) 245, 646, 749, 1388, 1408, 1462
TseI GCWGC 2 cut(s) 233, 1334
Tsp45I GTSAC 6 cut(s) 245, 646, 749, 1388, 1408, 1462
TspRI CASTG 1 cut(s) 1701
Tth111I GACNNNGTC 1 cut(s) 1235
VpaK11BI GGWCC 2 cut(s) 1328, 1636
VspI ATTAAT 1 cut(s) 465
XagI CCTNNNNNAGG 1 cut(s) 1435
XapI RAATTY 4 cut(s) 693, 1354, 1755, 2394
XceI RCATGY 2 cut(s) 530, 1538
XcmI CCANNNNNNNNNTGG 2 cut(s) 1296, 2106
XmiI GTMKAC 2 cut(s) 200, 801
XmnI GAANNNNTTC 2 cut(s) 1728, 2373
XspI CTAG 7 cut(s) 86, 269, 294, 701, 1017, 1620, 1665
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.