Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0000855

Physical Location & Seq

Genomic Coordinates Reverse (-)

27502595 .. 27507885

Gene Structure 5291 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g37900.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2565 bp

ATGGCCGAAGATAAATCAGAAACACAAACACAAACACATGAGACTCCAGAGACATCGGTGGTGCACCTTCACGGCAACCTTGACTTGAAAATCATAGAGGCGCGATGTCTGCCCAACATGGACATGCTCTCCGAGCGGTTCCGCCGATTATTCTCCGCCTGCCGCAAGCCATTTGCTAATTCCAAGCACCATCATCACCATAAAATCATCACCAGCGACCCTTACGTCACCGTCTGCCTCGCCGGAGCTACCGTCGCACGGACGCGCGTGATCTCCAACTCCCAAAACCCCGAATGGAAGGAGCATTTCACCATCCCTCTCGCCCACCCCGTCTCGCAAGTCGAGTTCTACGTCAAGGACAACGACATGTTCGGCGCCGATTTAATCGGCGTGGCGTCCGTCTCGGCGAAGCGAATCCTCTCCGGCGAGACCATCAGTGATTGGTTCCCGATAATCGGGCCGTTGGGGAAGCCGCCGAAACCGGACGCGGCGGTTAAGCTGGAAATGAGGTTCACGAAATGCGAGGACAACCCGCTGTATAAGGACGGCATTATTTCCAACGAACGTGTCGGGGGAGTTGAAAACTGTTACTTTCCGGCGCGGCAAGGAGGTCACGTGACGCTGTACCAGGACGCGCACGTGCCGGACGGGATGCTGGAGGAGATAGAATTGGACGAGGGGGTCAAGTTTGAGCACGGGAAATGCTGGGAGGATATTTGTCACGCGATTTTGGAGGCCCATCATTTGGTGTACATTGTGGGCTGGTCCATTTTCCATAAGATCAAGCTGGTCAGAGAGCCCAGTAAGCCCTTGCCCAGCGGCGGCAATTTGAATCTGGGGGAGCTGCTCAAGTATAAATCGCAGGAAGGGTTGAGAGTTTTGTTGCTGGTTTGGGATGACAAGACTTCTCACAGCAAGTTCTTCATCAATACGGCTGGAGTGATGCAAACGCATGATGAAGAAACCCGAAAGTTTTTTAAGCATTCTTCGGTGTCATGCGTGCTGTCACCTAGATATGCCAGCAGTAAGCTTAGCATTTTCAAGCAACAGGTTGTTGGAACCTTGTTTACACATCATCAAAAGTGTGTGATTGTGGATACACAAGCGTCTGGGAATAATCGAAAGTTAACAGCATTTATAGGAGGTCTGGACCTCTGTGATGGTCGCTATGATACTCCCGAGCATCGGCTGTTTAGCGATCTTGACACAGTTTTCCAGGGTGATTTTCATAATCCCACATTGGCTGGCTCAAAGGGTCCAAGACAACCCTGGCATGATCTACATTGCAAAATTGAAGGGCCGGCTGCATACGATGTGCTAACTAATTTTGAGCAGCGCTGGAAAAAAGCCACAAAATGGTCAGAGTTTGGGCAACGCTTTAAAAGAGTGTCGCGTTGGCACGACGATGCTTTGATCAAGTTGGACCGCATCTCATGGATACTTAGTCCCCCACCAGGCAGTTCCAATGATGATCCTATATTACGGGTTTCAGATGAAGCTGATCCTCAAAACTGGAATGTTCAGATCTTCCGATCCATAGATTCTGGATCTGTGAAAGGATTTCCCAAAGATGTGTATGAAGCTGAGAATCAGAATCTTTTCTGTGCCAAAAATTTGGTTATAGACAAGAGCATCCAGACAGCATATATCGAAGCAATCAGGTCTGCGCAACACTTCATATACATTGAGAATCAGTATTTCCTCGGATCTTCTTACGCATGGCCGACTTACAAAGAAGCAGGTGCTGACAATTTAATTCCAATGGAGCTGGCATTAAAGATTGCTAGTAAGATACGCGCCAAAGAGAGATTTGCGGTGTATGTTGTGATACCAATGTGGCCAGAAGGTGTGCCCTCTTCTGCTTCTGTGCAAGAAATTCTCTTTTGGCAGGGACAAACAATGCAAATGATGTATGAAATCATAGCCAAAGAGCTGAAATCCATGAATATTGAGAATGCTCATCCGCAGGACTACCTAAATTTCTACTGTCTTGGTAATCGGGAAAAGCTTCCTGGCACAGTGACCTCTACAACTAACCAAACTTCCAAAACTGGTTCTCCTGGTCACACGGTTTCTGCCTCCCAAAAGTATCAACGATTTATGATTTATGTACATGCCAAGGGAATGGTAGTAGATGATGAGTACGTGATGATAGGTTCTGCGAATATCAACCAACGATCCATGGCAGGGTCTAGGGACACTGAGATAGCCATGGGCGCATATCAACCGCATCACACATGGGGAAAGAAGAAGCGGCATCCTCACGGCCAGGTGTATGGATATAGAATGTCACTTTGGACAGAACACATGGGGAAGGTTGAGAATTGCTTCAAGGAGCCTCAAACATTAGAATGCGTGAAGCGTGTGAACGACATTAGTAAGGACAATTGGAGCAGGTTCGTGTCCGAGGAGTTTATAGAATTGCAGGGACACCTTATCAAGTACCCGGTTGAGGTTCATGCCAATGGCAAGGTAGGCGCATTGCCTGGCCGAGAGAGCTTCCCTGATGTTGGTGGTAAGATCCTCGGTGCTCGCACTAACCTTCCTGATGCTTTGACTACTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0008081 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010119 GO:0010646 GO:0010647 GO:0012501 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0023051 GO:0023056 GO:0030054 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046473 GO:0046486 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0090333 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

855

Amino Acids

96.67

Weight (kDa)

6.98

Isoelectric Point (pI)

33.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	25 - 150	1.3e-17	C2 domain
PLDc_2	PF13091	697 - 738	1e-06	PLD-like domain
PLDc	PF00614	702 - 727	1.5e-07	Phospholipase D Active site motif
PLD_C	PF12357	774 - 844	2.9e-29	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35790 AT4G35790 AT4G35790
fragaria_vesca	FvH4_1g11000 FvH4_1g11020 FvH4_1g11020 FvH4_2g37900 FvH4_5g01272 FvH4_5g28780 FvH4_5g28800 FvH4_7g08510 FvH4_7g08510
malus_domestica	MD02G1123100.v1.1 MD08G1149700.v1.1 MD08G1237200.v1.1 MD15G1006400.v1.1 MD15G1237100.v1.1
prunus_persica	Prupe.1G359000_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.7G175400_v2.0.a1
pyrus_communis	pycom02g09600 pycom15g00480 pycom15g21090
rosa_chinensis	RchiOBHm_Chr2g0098271 RchiOBHm_Chr6g0303711 RchiOBHm_Chr7g0221001 RchiOBHm_Chr7g0221011
rosa_laevigata	RLG00000002185 RLG00000011053 RLG00000016781
rosa_multiflora	Rmu_co8414259.1_g000001 Rmu_co8436567.1_g000002 Rmu_co8452585.1_g000001 Rmu_sc0001024.1_g000003 Rmu_sc0002105.1_g000010 Rmu_sc0002105.1_g000018 Rmu_sc0002105.1_g000020 Rmu_sc0009922.1_g000005 Rmu_sc0039265.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144090 Rroxscaffold_3G00238820 Rroxscaffold_7G00164460
rosa_rugosa	Rorug02G0071800 Rorug06G0324200 Rorug07G0199200 Rorug07G0199300 Rorug07G0199400 Rorug07G0199500 Rorug07G0199600
rosa_samantha	Rh1CG003000 Rh2AG118900 Rh2BG121800 Rh2CG123400 Rh2DG123500 Rh6AG438500 Rh6BG464500 Rh6CG450800 Rh6DG437500 Rh7AG339200 Rh7BG329900 Rh7CG357200 Rh7DG337900
rosa_wichuraiana	Rw2G009320 Rw6G037950 Rw7G028850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1730
AasI	GACNNNNNNGTC	2 cut(s)	224, 680
Acc16I	TGCGCA	1 cut(s)	1668
Acc36I	ACCTGC	2 cut(s)	1730, 2385
AccB1I	GGYRCC	1 cut(s)	374
AccB7I	CCANNNNNTGG	2 cut(s)	745, 1356
AccBSI	CCGCTC	1 cut(s)	136
AccII	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
AclWI	GGATC	7 cut(s)	1466, 1496, 1527, 1555, 1714, 2172, 2515
AcoI	YGGCCR	5 cut(s)	3, 1721, 1838, 2266, 2488
AcsI	RAATTY	3 cut(s)	1612, 1875, 1978
AcvI	CACGTG	2 cut(s)	616, 640
AcyI	GRCGYC	2 cut(s)	375, 395
AfaI	GTAC	5 cut(s)	626, 752, 2112, 2144, 2444
AfeI	AGCGCT	1 cut(s)	1337
AflIII	ACRYGT	2 cut(s)	366, 565
AgsI	TTSAA	6 cut(s)	88, 581, 832, 1042, 1295, 2332
AjnI	CCWGG	8 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2485
AjuI	GAANNNNNNNTTGG	2 cut(s)	2278, 2310
AloI	GAACNNNNNNTCC	2 cut(s)	494, 526
Alw21I	GWGCWC	3 cut(s)	66, 696, 2533
Alw26I	GTCTC	5 cut(s)	35, 44, 337, 406, 422
Alw44I	GTGCAC	1 cut(s)	62
AlwI	GGATC	7 cut(s)	1466, 1496, 1527, 1555, 1714, 2172, 2515
AlwNI	CAGNNNCTG	1 cut(s)	1745
Ama87I	CYCGRG	1 cut(s)	1178
Aor51HI	AGCGCT	1 cut(s)	1337
AoxI	GGCC	8 cut(s)	3, 458, 735, 1298, 1721, 1838, 2266, 2488
ApaLI	GTGCAC	1 cut(s)	62
ApeKI	GCWGC	3 cut(s)	844, 1304, 1333
ApoI	RAATTY	3 cut(s)	1612, 1875, 1978
Asp700I	GAANNNNTTC	3 cut(s)	1598, 2007, 2327
AspS9I	GGNCC	7 cut(s)	458, 736, 765, 1150, 1256, 1298, 1423
AsuC2I	CCSGG	1 cut(s)	2447
AsuHPI	GGTGA	6 cut(s)	188, 202, 220, 301, 999, 1232
AvaI	CYCGRG	1 cut(s)	1178
AvaII	GGWCC	4 cut(s)	765, 1150, 1256, 1423
BaeGI	GKGCMC	2 cut(s)	66, 1854
BaeI	ACNNNNGTAYC	2 cut(s)	1820, 1853
BalI	TGGCCA	1 cut(s)	1840
BanI	GGYRCC	1 cut(s)	374
BanII	GRGCYC	1 cut(s)	801
BbrPI	CACGTG	2 cut(s)	616, 640
Bbv12I	GWGCWC	3 cut(s)	66, 696, 2533
BbvI	GCAGC	3 cut(s)	831, 1291, 1345
BccI	CCATC	5 cut(s)	198, 320, 440, 747, 1154
BceAI	ACGGC	5 cut(s)	88, 445, 562, 948, 2281
BciT130I	CCWGG	8 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2487
BciVI	GTATCC	2 cut(s)	1090, 1431
BclI	TGATCA	1 cut(s)	1413
BcnI	CCSGG	1 cut(s)	2447
BcoDI	GTCTC	5 cut(s)	35, 44, 337, 406, 422
BfaI	CTAG	3 cut(s)	1011, 1785, 2193
BfoI	RGCGCY	2 cut(s)	378, 1339
BfuAI	ACCTGC	2 cut(s)	1730, 2385
BfuI	GTATCC	2 cut(s)	1090, 1431
BglII	AGATCT	1 cut(s)	1524
BlpI	GCTNAGC	1 cut(s)	1031
Bme1390I	CCNGG	9 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2447, 2487
Bme18I	GGWCC	4 cut(s)	765, 1150, 1256, 1423
BmeT110I	CYCGRG	1 cut(s)	1178
BmgT120I	GGNCC	7 cut(s)	458, 736, 765, 1150, 1256, 1298, 1423
BmiI	GGNNCC	6 cut(s)	140, 376, 446, 1060, 1257, 2337
BmrFI	CCNGG	9 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2447, 2487
BmrI	ACTGGG	1 cut(s)	795
BmsI	GCATC	9 cut(s)	642, 933, 1192, 1396, 1437, 1641, 2239, 2266, 2539
BmuI	ACTGGG	1 cut(s)	795
BpmI	CTGGAG	3 cut(s)	30, 677, 957
Bpu1102I	GCTNAGC	1 cut(s)	1031
BpuEI	CTTGAG	1 cut(s)	833
BpuMI	CCSGG	1 cut(s)	2447
BsaAI	YACGTR	3 cut(s)	616, 640, 2146
BsaHI	GRCGYC	2 cut(s)	375, 395
BsaI	GGTCTC	1 cut(s)	422
BsaJI	CCNNGG	8 cut(s)	1216, 1268, 1702, 2118, 2181, 2211, 2406, 2524
BsaWI	WCCGGW	1 cut(s)	481
BsaXI	ACNNNNNCTCC	8 cut(s)	113, 143, 237, 267, 600, 630, 2041, 2071
Bse118I	RCCGGY	1 cut(s)	1300
Bse1I	ACTGG	3 cut(s)	801, 1517, 2056
Bse3DI	GCAATG	2 cut(s)	1282, 2480
BseBI	CCWGG	8 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2487
BseDI	CCNNGG	8 cut(s)	1216, 1268, 1702, 2118, 2181, 2211, 2406, 2524
BseGI	GGATG	6 cut(s)	312, 657, 901, 1632, 1960, 2257
BseMI	GCAATG	2 cut(s)	1282, 2480
BseMII	CTCAG	2 cut(s)	1575, 2193
BseNI	ACTGG	3 cut(s)	801, 1517, 2056
BseRI	GAGGAG	2 cut(s)	674, 2423
BseSI	GKGCMC	2 cut(s)	66, 1854
BseXI	GCAGC	3 cut(s)	831, 1291, 1345
BseYI	CCCAGC	2 cut(s)	705, 815
Bsh1236I	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
BshFI	GGCC	8 cut(s)	5, 460, 737, 1300, 1723, 1840, 2268, 2490
BshNI	GGYRCC	1 cut(s)	374
BsiHKAI	GWGCWC	3 cut(s)	66, 696, 2533
BsiHKCI	CYCGRG	1 cut(s)	1178
BsiSI	CCGG	7 cut(s)	243, 423, 482, 596, 644, 1301, 2447
BslFI	GGGAC	4 cut(s)	1431, 1905, 2210, 2442
BsmAI	GTCTC	5 cut(s)	35, 44, 337, 406, 422
BsmBI	CGTCTC	2 cut(s)	337, 406
BsmFI	GGGAC	4 cut(s)	1431, 1905, 2210, 2442
BsmI	GAATGC	3 cut(s)	982, 1960, 2357
BsnI	GGCC	8 cut(s)	5, 460, 737, 1300, 1723, 1840, 2268, 2490
Bso31I	GGTCTC	1 cut(s)	422
BsoBI	CYCGRG	1 cut(s)	1178
Bsp1286I	GDGCHC	5 cut(s)	66, 696, 801, 1854, 2533
Bsp1407I	TGTACA	2 cut(s)	750, 2110
Bsp1720I	GCTNAGC	1 cut(s)	1031
Bsp19I	CCATGG	2 cut(s)	2181, 2211
BspANI	GGCC	8 cut(s)	5, 460, 737, 1300, 1723, 1840, 2268, 2490
BspCNI	CTCAG	2 cut(s)	1576, 2194
BspFNI	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
BspLI	GGNNCC	6 cut(s)	140, 376, 446, 1060, 1257, 2337
BspMI	ACCTGC	2 cut(s)	1730, 2385
BspPI	GGATC	7 cut(s)	1466, 1496, 1527, 1555, 1714, 2172, 2515
BspT107I	GGYRCC	1 cut(s)	374
BspTNI	GGTCTC	1 cut(s)	422
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	2 cut(s)	1282, 2480
BsrFI	RCCGGY	1 cut(s)	1300
BsrGI	TGTACA	2 cut(s)	750, 2110
BsrI	ACTGG	3 cut(s)	801, 1517, 2056
BssAI	RCCGGY	1 cut(s)	1300
BssECI	CCNNGG	8 cut(s)	1216, 1268, 1702, 2118, 2181, 2211, 2406, 2524
BssNI	GRCGYC	2 cut(s)	375, 395
BssT1I	CCWWGG	3 cut(s)	2118, 2181, 2211
Bst2UI	CCWGG	8 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2487
Bst4CI	ACNGT	7 cut(s)	232, 253, 587, 1210, 1988, 2020, 2071
Bst6I	CTCTTC	1 cut(s)	1861
BstACI	GRCGYC	2 cut(s)	375, 395
BstAUI	TGTACA	2 cut(s)	750, 2110
BstBAI	YACGTR	3 cut(s)	616, 640, 2146
BstC8I	GCNNGC	8 cut(s)	160, 167, 1001, 1021, 1246, 1302, 1770, 2533
BstDEI	CTNAG	4 cut(s)	1031, 1442, 1584, 2202
BstDSI	CCRYGG	2 cut(s)	2181, 2211
BstF5I	GGATG	6 cut(s)	312, 657, 901, 1632, 1960, 2257
BstFNI	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
BstH2I	RGCGCY	2 cut(s)	378, 1339
BstMAI	GTCTC	5 cut(s)	35, 44, 337, 406, 422
BstMWI	GCNNNNNNNGC	7 cut(s)	109, 133, 254, 805, 2216, 2475, 2496
BstNI	CCWGG	8 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2487
BstNSI	RCATGY	3 cut(s)	127, 370, 2117
BstSCI	CCNGG	9 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2445, 2485
BstSLI	GKGCMC	2 cut(s)	66, 1854
BstUI	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
BstV1I	GCAGC	3 cut(s)	831, 1291, 1345
BstX2I	RGATCY	4 cut(s)	1524, 1547, 1706, 2520
BstXI	CCANNNNNNTGG	3 cut(s)	1615, 2125, 2276
BstYI	RGATCY	4 cut(s)	1524, 1547, 1706, 2520
BsuI	GTATCC	2 cut(s)	1090, 1431
BsuRI	GGCC	8 cut(s)	5, 460, 737, 1300, 1723, 1840, 2268, 2490
BtgI	CCRYGG	2 cut(s)	2181, 2211
BtgZI	GCGATG	1 cut(s)	118
BtsCI	GGATG	6 cut(s)	312, 657, 901, 1632, 1960, 2257
BtsIMutI	CAGTG	3 cut(s)	442, 2025, 2199
BveI	ACCTGC	2 cut(s)	1730, 2385
Cac8I	GCNNGC	8 cut(s)	160, 167, 1001, 1021, 1246, 1302, 1770, 2533
CaiI	CAGNNNCTG	1 cut(s)	1745
Cfr10I	RCCGGY	1 cut(s)	1300
Cfr13I	GGNCC	7 cut(s)	458, 736, 765, 1150, 1256, 1298, 1423
CseI	GACGC	6 cut(s)	271, 384, 494, 628, 641, 1095
Csp6I	GTAC	5 cut(s)	625, 751, 2111, 2143, 2443
CviQI	GTAC	5 cut(s)	625, 751, 2111, 2143, 2443
DdeI	CTNAG	4 cut(s)	1031, 1442, 1584, 2202
DinI	GGCGCC	1 cut(s)	376
DraI	TTTAAA	1 cut(s)	1381
DrdI	GACNNNNNNGTC	2 cut(s)	224, 680
DseDI	GACNNNNNNGTC	2 cut(s)	224, 680
EaeI	YGGCCR	5 cut(s)	3, 1721, 1838, 2266, 2488
Eam1104I	CTCTTC	1 cut(s)	1861
EarI	CTCTTC	1 cut(s)	1861
EciI	GGCGGA	2 cut(s)	131, 145
Eco130I	CCWWGG	3 cut(s)	2118, 2181, 2211
Eco24I	GRGCYC	1 cut(s)	801
Eco31I	GGTCTC	1 cut(s)	422
Eco47I	GGWCC	4 cut(s)	765, 1150, 1256, 1423
Eco47III	AGCGCT	1 cut(s)	1337
Eco72I	CACGTG	2 cut(s)	616, 640
Eco88I	CYCGRG	1 cut(s)	1178
EcoRII	CCWGG	8 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2485
EcoT14I	CCWWGG	3 cut(s)	2118, 2181, 2211
EcoT38I	GRGCYC	1 cut(s)	801
EgeI	GGCGCC	1 cut(s)	376
EheI	GGCGCC	1 cut(s)	376
ErhI	CCWWGG	3 cut(s)	2118, 2181, 2211
Esp3I	CGTCTC	2 cut(s)	337, 406
FaqI	GGGAC	4 cut(s)	1431, 1905, 2210, 2442
FauI	CCCGC	1 cut(s)	540
FbaI	TGATCA	1 cut(s)	1413
FokI	GGATG	6 cut(s)	299, 664, 908, 1619, 1947, 2244
FriOI	GRGCYC	1 cut(s)	801
FspBI	CTAG	3 cut(s)	1011, 1785, 2193
FspI	TGCGCA	1 cut(s)	1668
GsaI	CCCAGC	2 cut(s)	709, 819
GsuI	CTGGAG	3 cut(s)	30, 677, 957
HaeII	RGCGCY	2 cut(s)	378, 1339
HaeIII	GGCC	8 cut(s)	5, 460, 737, 1300, 1723, 1840, 2268, 2490
HapII	CCGG	7 cut(s)	243, 423, 482, 596, 644, 1301, 2447
HgaI	GACGC	6 cut(s)	271, 384, 494, 628, 641, 1095
Hin1I	GRCGYC	2 cut(s)	375, 395
HincII	GTYRAC	1 cut(s)	1128
HindII	GTYRAC	1 cut(s)	1128
HindIII	AAGCTT	2 cut(s)	1028, 2006
HinfI	GANTC	7 cut(s)	43, 414, 832, 1541, 1588, 1594, 1690
HpaI	GTTAAC	1 cut(s)	1128
HpaII	CCGG	7 cut(s)	243, 423, 482, 596, 644, 1301, 2447
HphI	GGTGA	6 cut(s)	188, 202, 220, 301, 999, 1232
Hpy166II	GTNNAC	6 cut(s)	64, 513, 751, 1068, 1128, 2368
Hpy8I	GTNNAC	6 cut(s)	64, 513, 751, 1068, 1128, 2368
Hpy99I	CGWCG	2 cut(s)	257, 1406
HpyAV	CCTTC	7 cut(s)	77, 292, 860, 1289, 1838, 2308, 2552
HpyCH4III	ACNGT	7 cut(s)	232, 253, 587, 1210, 1988, 2020, 2071
HpyCH4IV	ACGT	6 cut(s)	225, 351, 565, 615, 639, 2145
HpyCH4V	TGCA	7 cut(s)	64, 946, 1287, 1307, 1870, 1903, 2425
HpyF10VI	GCNNNNNNNGC	7 cut(s)	109, 133, 254, 805, 2216, 2475, 2496
HpyF3I	CTNAG	4 cut(s)	1031, 1442, 1584, 2202
HpySE526I	ACGT	6 cut(s)	225, 351, 565, 615, 639, 2145
Hsp92I	GRCGYC	2 cut(s)	375, 395
KasI	GGCGCC	1 cut(s)	374
KroI	GCCGGC	1 cut(s)	1300
KroNI	GCCGGC	1 cut(s)	1302
Ksp22I	TGATCA	1 cut(s)	1413
KspAI	GTTAAC	1 cut(s)	1128
LmnI	GCTCC	6 cut(s)	245, 301, 841, 1765, 2335, 2391
Lsp1109I	GCAGC	3 cut(s)	831, 1291, 1345
LweI	GCATC	9 cut(s)	642, 933, 1192, 1396, 1437, 1641, 2239, 2266, 2539
MaeI	CTAG	3 cut(s)	1011, 1785, 2193
MaeII	ACGT	6 cut(s)	225, 351, 565, 615, 639, 2145
MaeIII	GTNAC	9 cut(s)	226, 587, 611, 616, 719, 1005, 2020, 2063, 2289
MbiI	CCGCTC	1 cut(s)	136
MboII	GAAGA	8 cut(s)	20, 913, 971, 978, 1519, 1701, 1848, 2260
MfeI	CAATTG	1 cut(s)	2386
MflI	RGATCY	4 cut(s)	1524, 1547, 1706, 2520
MhlI	GDGCHC	5 cut(s)	66, 696, 801, 1854, 2533
MlsI	TGGCCA	1 cut(s)	1840
MluNI	TGGCCA	1 cut(s)	1840
Mly113I	GGCGCC	1 cut(s)	375
MlyI	GAGTC	1 cut(s)	37
MmeI	TCCRAC	4 cut(s)	300, 582, 1036, 1401
Mox20I	TGGCCA	1 cut(s)	1840
MroNI	GCCGGC	1 cut(s)	1300
MroXI	GAANNNNTTC	3 cut(s)	1598, 2007, 2327
MscI	TGGCCA	1 cut(s)	1840
MseI	TTAA	8 cut(s)	383, 495, 978, 1127, 1380, 1754, 1775, 2563
MslI	CAYNNNNRTG	4 cut(s)	122, 1404, 2350, 2463
Msp20I	TGGCCA	1 cut(s)	1840
MspA1I	CMGCKG	2 cut(s)	535, 819
MspI	CCGG	7 cut(s)	243, 423, 482, 596, 644, 1301, 2447
MspR9I	CCNGG	9 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2447, 2487
MunI	CAATTG	1 cut(s)	2386
Mva1269I	GAATGC	3 cut(s)	982, 1960, 2357
MvaI	CCWGG	8 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2487
MvnI	CGCG	9 cut(s)	103, 265, 267, 488, 601, 635, 725, 1393, 1797
MwoI	GCNNNNNNNGC	7 cut(s)	109, 133, 254, 805, 2216, 2475, 2496
NaeI	GCCGGC	1 cut(s)	1302
NarI	GGCGCC	1 cut(s)	375
NciI	CCSGG	1 cut(s)	2447
NcoI	CCATGG	2 cut(s)	2181, 2211
NgoMIV	GCCGGC	1 cut(s)	1300
NlaIV	GGNNCC	6 cut(s)	140, 376, 446, 1060, 1257, 2337
NmeAIII	GCCGAG	2 cut(s)	383, 2516
NmuCI	GTSAC	8 cut(s)	226, 611, 616, 719, 1005, 2020, 2063, 2289
NsbI	TGCGCA	1 cut(s)	1668
NspI	RCATGY	3 cut(s)	127, 370, 2117
PaqCI	CACCTGC	1 cut(s)	1730
PciI	ACATGT	1 cut(s)	366
PcsI	WCGNNNNNNNCGW	2 cut(s)	327, 348
PctI	GAATGC	3 cut(s)	982, 1960, 2357
PdiI	GCCGGC	1 cut(s)	1302
PdmI	GAANNNNTTC	3 cut(s)	1598, 2007, 2327
PfeI	GAWTC	6 cut(s)	414, 832, 1541, 1588, 1594, 1690
PflMI	CCANNNNNTGG	2 cut(s)	745, 1356
PleI	GAGTC	1 cut(s)	37
PluTI	GGCGCC	1 cut(s)	378
PmaCI	CACGTG	2 cut(s)	616, 640
PmlI	CACGTG	2 cut(s)	616, 640
PpsI	GAGTC	1 cut(s)	37
Ppu21I	YACGTR	3 cut(s)	616, 640, 2146
PscI	ACATGT	1 cut(s)	366
Psp6I	CCWGG	8 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2485
PspCI	CACGTG	2 cut(s)	616, 640
PspFI	CCCAGC	2 cut(s)	705, 815
PspGI	CCWGG	8 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2485
PspN4I	GGNNCC	6 cut(s)	140, 376, 446, 1060, 1257, 2337
PspPI	GGNCC	7 cut(s)	458, 736, 765, 1150, 1256, 1298, 1423
PsrI	GAACNNNNNNTAC	2 cut(s)	1051, 1083
PstNI	CAGNNNCTG	1 cut(s)	1745
PsuI	RGATCY	4 cut(s)	1524, 1547, 1706, 2520
RsaI	GTAC	5 cut(s)	626, 752, 2112, 2144, 2444
RsaNI	GTAC	5 cut(s)	625, 751, 2111, 2143, 2443
RseI	CAYNNNNRTG	4 cut(s)	122, 1404, 2350, 2463
SaqAI	TTAA	8 cut(s)	383, 495, 978, 1127, 1380, 1754, 1775, 2563
Sau96I	GGNCC	7 cut(s)	458, 736, 765, 1150, 1256, 1298, 1423
SchI	GAGTC	1 cut(s)	37
ScrFI	CCNGG	9 cut(s)	629, 1217, 1270, 1455, 2013, 2061, 2270, 2447, 2487
SduI	GDGCHC	5 cut(s)	66, 696, 801, 1854, 2533
SfaNI	GCATC	9 cut(s)	642, 933, 1192, 1396, 1437, 1641, 2239, 2266, 2539
SfoI	GGCGCC	1 cut(s)	376
SinI	GGWCC	4 cut(s)	765, 1150, 1256, 1423
SmiMI	CAYNNNNRTG	4 cut(s)	122, 1404, 2350, 2463
SmlI	CTYRAG	1 cut(s)	848
SmoI	CTYRAG	1 cut(s)	848
SspDI	GGCGCC	1 cut(s)	374
SspI	AATATT	1 cut(s)	1948
SspMI	CTAG	3 cut(s)	1011, 1785, 2193
StyD4I	CCNGG	9 cut(s)	627, 1215, 1268, 1453, 2011, 2059, 2268, 2445, 2485
StyI	CCWWGG	3 cut(s)	2118, 2181, 2211
TaaI	ACNGT	7 cut(s)	232, 253, 587, 1210, 1988, 2020, 2071
TaiI	ACGT	6 cut(s)	228, 354, 568, 618, 642, 2148
TaqI	TCGA	3 cut(s)	342, 1120, 1650
TatI	WGTACW	2 cut(s)	750, 2110
TauI	GCSGC	7 cut(s)	165, 475, 491, 604, 822, 825, 2257
TfiI	GAWTC	6 cut(s)	414, 832, 1541, 1588, 1594, 1690
Tru1I	TTAA	8 cut(s)	383, 495, 978, 1127, 1380, 1754, 1775, 2563
Tru9I	TTAA	8 cut(s)	383, 495, 978, 1127, 1380, 1754, 1775, 2563
TscAI	CASTG	3 cut(s)	442, 2025, 2206
TseFI	GTSAC	8 cut(s)	226, 611, 616, 719, 1005, 2020, 2063, 2289
TseI	GCWGC	3 cut(s)	844, 1304, 1333
Tsp45I	GTSAC	8 cut(s)	226, 611, 616, 719, 1005, 2020, 2063, 2289
TspDTI	ATGAA	9 cut(s)	913, 972, 1217, 1509, 1593, 1666, 1929, 1958, 2447
TspGWI	ACGGA	2 cut(s)	274, 388
TspRI	CASTG	3 cut(s)	442, 2025, 2206
Van91I	CCANNNNNTGG	2 cut(s)	745, 1356
VneI	GTGCAC	1 cut(s)	62
VpaK11BI	GGWCC	4 cut(s)	765, 1150, 1256, 1423
XapI	RAATTY	3 cut(s)	1612, 1875, 1978
XceI	RCATGY	3 cut(s)	127, 370, 2117
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1266
XmnI	GAANNNNTTC	3 cut(s)	1598, 2007, 2327
XspI	CTAG	3 cut(s)	1011, 1785, 2193

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.