Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0000855

Physical Location & Seq

Genomic Coordinates Reverse (-)

6639127 .. 6644669

Gene Structure 5543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g09600.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2871 bp

ATGACGTTAAAAGTCCAAATTACCGTTAACGGACACCAACCCATTCATCCCGCTCACTCACTCTCATCCCTCCCTCTTATCCTCCGTCTCTCAATTTTTATTTCATCTTTTTCTTCACGGGATTTAAAATCCCCCCAAATCCTTCCCTCCGAGGCGCCACGAGTTCCCTCTGCAACTCCCGTCTCCTCTGCCTACAACCAACGCCAACGCCGACGCCAAACCTCCCAAACCCAGCTTCTTCTCACTATTCACACACACCGCAAACCCAGCAAATCTCACTTTTGTACACTGCCCGCCCACGAAATGGCCGAAACGGAGTCGGAGGAGCGGATGATCTACCTGCACGGCGACCTCGACCTCACAATCTTCGAAGCCCGCCGCCTCCCCAACATGGACATGTTCTCCGAGCGCTTCCGCCGCTGCTTCACCGCCTGCGACACCATCAATATCTCCTCCACCCCCTCCGCCGAAGACGAGGGCGGAGAACGCAAGCATCACGTTCCCCACCGAAAGATCATCACCAGCGACTCATACGTCACCGTTACGGTCCCCCAGACCACCGTCGCCCGGACACGTGTCATGAAGAACTCCCAGAACCCGCAGTGGAAGGAGCACTTCTTTGTCCCGCTGGCGCACCCTGCAATTAACCTCGAGTTTCACGTCAAAGATGACGACGTCTTTGGCGCTGAGATCATCGGAACCGCCAAGATCCCGGCGGAGAGAATCGCCACCGGAGAGCTCATCTCCGGGTGGTTCCCCATTTACGGACCCTCCGGGAAGCCCCCGAAACCCGACTCGGCGATCCGGCTCGAATTGCAGTTCACGCCGTTCGAGAAAAACCCAGTGTACAAGCAAGGCATAGCGGGGGATCCGGAGCACAAGGGCGTGCGTAACACGTACTTCCCGCTCCGGAAGGGAAGCTCCGTGAGGTTGTACCAAGACGCGCACTGCCCTGGAGGGCTGCCGGAGATTCGGTTGGACGGTGGGAAGGTGTACAAGGCGGAGAATACATGGGAGGACATTTGCTATGCGATTACGGAGGCGCATCACTTGGTTTACATTGTGGGTTGGTCGGTGTTTCACAAGGTGCGGCTGATTCGGGAGCCGAGCCGGCCGCTGCCGCGCGGCGGCGACCTGATGCTCGGCGATTTGCTCAAGTACAAGTCGGAGGAGGGCGTGAGGGTGTTGCTGTTGGTGTGGGACGATAAGTCCTCGCACGACAAGTTCGGCTTCAAAACGGCAGGAATGATGGGGACGCATGATGAAGAAACCCGGAAGTTTTTCAAGCATTCATCTGTAAATTGTGTGCTGTCAACTCGCTACGCTAGCAGTAAGCTTAGCATTATAAAACAACAGGTTGTTGGAACCCTTTTCACCCACCATCAAAAATGTGTTCTTGTGGACACACAGGCTGATGGTAATAATCGGAAGATAACTGCATTTTTAGGAGGTCTTGATCTTTGTGATGGTCGTTATGACACACCCGAGCACAGACTGTTTCGTAATCTTGACACTGTATTTAAGGGTGATGTTCATCAACCTACTTTTCCTGCTGGAACCAAGGCTCCAAGACAACCATGGCATGACTTGCACTGTAGAGTTGATGGGCCTGCTGCATATGATGTTCTTATAAACTTTGAGCAACGTTGGAGGAAAGCAACGCGGTGGAAGGAGTTTGCACTACTGAGTAAGAAGGTTTCACATTGGCATGACGATGCATTGATAAAAATTGACCGCATCTCCTGGATACTAAGTCCTCCCCCATCTGGTTCAAAGGATAGTACAATTATTCCAGAAGACGAGCCTTCGTTGTGGGTTAGCGATGAAAAAGATCCTGAAAATTGGCATGTTCAGATTTTCCGGTCCATTGACTCAGGATCACTGAAAGGATTTCCCAAAGCTGGCCGTGCTGCTGAGGCCAAGCATCTTATTTGCTCAAAGAATCTGGTAATAGATAAAAGCATTCAAACAGCTTACATCCAGGCAATCAGATCCGCCCAACACTTTATATATATCGAAAATCAGTATTTTCTTGGTTCATCATATGCATGGCCAGATTATAAAAATGCAGGAGCTGATAATCTTATCCCAATGGAGTTGGCATTAAAAATTGTTAGCAAAATTAAAGCTAATGAGAGATTCACGGTGTATGTCGTTTTACCTTTGTGGCCTGAAGGTGATCCAAAAACTCTCGCAATGCAAGAAATTCTCTTCTGGCAGAGGCAGACAATGCAAGCAATGTATAGTACTGTTGCAGAGGCACTGAAATCGGCACAGATTCAGGGCTCACATCCTCAAGATTACCTAAGTTTCTATTGCCTTGGTAACCGGGAAGCACTTCCTGAGGATACTGCAAATGACGATGCGTCTTCGGTTTCCGATTCACACAAAAATCGGCGGTTTATGATTTATGTTCATGCCAAGGGTATGGTAGTAGATGACGAGTACGTAATATTGGGATCTGCCAATATCAACCAAAGATCAATGGCTGGTACAAAGGACACTGAGATAGCTATGGGTGCGTATCAACCCCATTACACATGGGCTGCGAGGAAGAAACATCCGCTCGGTCAGATATATGGATATCGAATGTCACTTTGGGCCGAGCATCTTGATGCGTTGTATCCATGCTTCGAAGAGCCTGAGAGTTTGGAATGTATGAGGAAAGTAAATGAGGTTGCAGACAATAACTGGAAGAGATTCACATCTCCAGAGTTTACACTACTGCAGGGTCACCTTATGAAGTATCCTATCCACGTAGATGTTGATGGGACGGTCGGCCCCCTGCAGGGACATGAAAACTTCCCTGATGTTGGTGGTAAGGTACTTGGATCTCATTCCGTCAAAATTCCTGATATGCTCACGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005886 GO:0005911 GO:0006629 GO:0006644 GO:0006650 GO:0006793 GO:0006796 GO:0006950 GO:0008081 GO:0008150 GO:0008152 GO:0008219 GO:0009266 GO:0009409 GO:0009506 GO:0009628 GO:0009787 GO:0009789 GO:0009966 GO:0009967 GO:0009987 GO:0010119 GO:0010646 GO:0010647 GO:0012501 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0019637 GO:0023051 GO:0023056 GO:0030054 GO:0042578 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044464 GO:0046473 GO:0046486 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0090333 GO:1901419 GO:1901421 GO:1905957 GO:1905959

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

957

Amino Acids

108.36

Weight (kDa)

8.07

Isoelectric Point (pI)

39.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000855)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35790 AT4G35790 AT4G35790
fragaria_vesca	FvH4_1g11000 FvH4_1g11020 FvH4_1g11020 FvH4_2g37900 FvH4_5g01272 FvH4_5g28780 FvH4_5g28800 FvH4_7g08510 FvH4_7g08510
malus_domestica	MD02G1123100.v1.1 MD08G1149700.v1.1 MD08G1237200.v1.1 MD15G1006400.v1.1 MD15G1237100.v1.1
prunus_persica	Prupe.1G359000_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.1G574700_v2.0.a1 Prupe.7G175400_v2.0.a1
pyrus_communis	pycom02g09600 pycom15g00480 pycom15g21090
rosa_chinensis	RchiOBHm_Chr2g0098271 RchiOBHm_Chr6g0303711 RchiOBHm_Chr7g0221001 RchiOBHm_Chr7g0221011
rosa_laevigata	RLG00000002185 RLG00000011053 RLG00000016781
rosa_multiflora	Rmu_co8414259.1_g000001 Rmu_co8436567.1_g000002 Rmu_co8452585.1_g000001 Rmu_sc0001024.1_g000003 Rmu_sc0002105.1_g000010 Rmu_sc0002105.1_g000018 Rmu_sc0002105.1_g000020 Rmu_sc0009922.1_g000005 Rmu_sc0039265.1_g000001
rosa_roxburghii	Rroxscaffold_2G00144090 Rroxscaffold_3G00238820 Rroxscaffold_7G00164460
rosa_rugosa	Rorug02G0071800 Rorug06G0324200 Rorug07G0199200 Rorug07G0199300 Rorug07G0199400 Rorug07G0199500 Rorug07G0199600
rosa_samantha	Rh1CG003000 Rh2AG118900 Rh2BG121800 Rh2CG123400 Rh2DG123500 Rh6AG438500 Rh6BG464500 Rh6CG450800 Rh6DG437500 Rh7AG339200 Rh7BG329900 Rh7CG357200 Rh7DG337900
rosa_wichuraiana	Rw2G009320 Rw6G037950 Rw7G028850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	1346, 1631, 2061
AasI	GACNNNNNNGTC	1 cut(s)	533
AatII	GACGTC	1 cut(s)	678
Acc36I	ACCTGC	1 cut(s)	348
AccB1I	GGYRCC	1 cut(s)	154
AccB7I	CCANNNNNTGG	1 cut(s)	304
AccBSI	CCGCTC	4 cut(s)	53, 328, 907, 2566
AccII	CGCG	4 cut(s)	944, 1123, 1125, 1663
AccIII	TCCGGA	2 cut(s)	871, 909
AclI	AACGTT	1 cut(s)	1645
AcoI	YGGCCR	4 cut(s)	306, 1112, 1903, 2051
AcsI	RAATTY	2 cut(s)	2205, 2847
AcuI	CTGAAG	1 cut(s)	2193
AcvI	CACGTG	1 cut(s)	575
AcyI	GRCGYC	3 cut(s)	155, 214, 675
AdeI	CACNNNGTG	1 cut(s)	1087
AfeI	AGCGCT	1 cut(s)	410
AflIII	ACRYGT	4 cut(s)	396, 572, 574, 894
AgsI	TTSAA	4 cut(s)	1234, 1285, 1773, 1967
AhdI	GACNNNNNGTC	2 cut(s)	1207, 2365
AjiI	CACGTC	1 cut(s)	661
AjnI	CCWGG	3 cut(s)	952, 1742, 1980
AjuI	GAANNNNNNNTTGG	4 cut(s)	219, 251, 2581, 2613
AloI	GAACNNNNNNTCC	2 cut(s)	1549, 1581
AluBI	AGCT	9 cut(s)	235, 739, 921, 1336, 1901, 1973, 2075, 2129, 2513
AluI	AGCT	9 cut(s)	235, 739, 921, 1336, 1901, 1973, 2075, 2129, 2513
Alw21I	GWGCWC	4 cut(s)	615, 741, 879, 1491
Alw26I	GTCTC	2 cut(s)	92, 187
AlwNI	CAGNNNCTG	1 cut(s)	2075
Ama87I	CYCGRG	2 cut(s)	650, 1484
Aor13HI	TCCGGA	2 cut(s)	871, 909
Aor51HI	AGCGCT	1 cut(s)	410
AoxI	GGCC	9 cut(s)	306, 1112, 1607, 1903, 1917, 2051, 2168, 2601, 2779
ApeKI	GCWGC	6 cut(s)	420, 961, 1117, 1613, 1910, 2546
ApoI	RAATTY	2 cut(s)	2205, 2847
ArsI	GACNNNNNNTTYG	2 cut(s)	662, 694
Asp700I	GAANNNNTTC	3 cut(s)	1280, 2337, 2699
AspLEI	GCGC	7 cut(s)	157, 411, 634, 686, 946, 1045, 1125
AspS9I	GGNCC	6 cut(s)	547, 767, 1607, 1863, 2601, 2780
AsuC2I	CCSGG	6 cut(s)	568, 713, 748, 775, 1273, 2330
AsuHPI	GGTGA	7 cut(s)	418, 511, 529, 1366, 1538, 2189, 2726
AsuII	TTCGAA	2 cut(s)	369, 2634
AsuNHI	GCTAGC	1 cut(s)	1325
AvaI	CYCGRG	2 cut(s)	650, 1484
AvaII	GGWCC	3 cut(s)	547, 767, 1863
AxyI	CCTNAGG	1 cut(s)	2343
BalI	TGGCCA	1 cut(s)	2053
BamHI	GGATCC	1 cut(s)	868
BanI	GGYRCC	1 cut(s)	154
BanII	GRGCYC	2 cut(s)	741, 2288
BarI	GAAGNNNNNNTAC	2 cut(s)	2615, 2647
BauI	CACGAG	1 cut(s)	159
BbrPI	CACGTG	1 cut(s)	575
BbsI	GAAGAC	3 cut(s)	477, 1803, 2361
Bbv12I	GWGCWC	4 cut(s)	615, 741, 879, 1491
BbvCI	CCTCAGC	1 cut(s)	1914
BbvI	GCAGC	6 cut(s)	407, 948, 1104, 1600, 1897, 2533
BccI	CCATC	8 cut(s)	449, 1243, 1389, 1409, 1460, 1598, 1771, 2762
BceAI	ACGGC	4 cut(s)	361, 811, 1254, 1890
BcgI	CGANNNNNNTGC	2 cut(s)	2250, 2284
BciT130I	CCWGG	3 cut(s)	954, 1744, 1982
BciVI	GTATCC	4 cut(s)	1740, 2341, 2634, 2757
BcnI	CCSGG	6 cut(s)	568, 713, 748, 775, 1273, 2330
BcoDI	GTCTC	2 cut(s)	92, 187
BfaI	CTAG	1 cut(s)	1326
BfmI	CTRYAG	3 cut(s)	1594, 2726, 2786
BfoI	RGCGCY	3 cut(s)	158, 412, 687
BfuAI	ACCTGC	1 cut(s)	348
BfuI	GTATCC	4 cut(s)	1740, 2341, 2634, 2757
BglI	GCCNNNNNGGC	1 cut(s)	1111
BlpI	GCTNAGC	1 cut(s)	1337
BmcAI	AGTACT	1 cut(s)	2248
Bme1390I	CCNGG	9 cut(s)	568, 713, 748, 775, 954, 1273, 1744, 1982, 2330
Bme18I	GGWCC	3 cut(s)	547, 767, 1863
BmeRI	GACNNNNNGTC	2 cut(s)	1207, 2365
BmeT110I	CYCGRG	2 cut(s)	650, 1484
BmgBI	CACGTC	1 cut(s)	661
BmgT120I	GGNCC	6 cut(s)	547, 767, 1607, 1863, 2601, 2780
BmrFI	CCNGG	9 cut(s)	568, 713, 748, 775, 954, 1273, 1744, 1982, 2330
BmrI	ACTGGG	1 cut(s)	836
BmsI	GCATC	9 cut(s)	502, 1054, 1128, 1705, 1746, 1933, 2353, 2605, 2617
BmtI	GCTAGC	1 cut(s)	1329
BmuI	ACTGGG	1 cut(s)	836
BoxI	GACNNNNGTC	2 cut(s)	560, 575
BpiI	GAAGAC	3 cut(s)	477, 1803, 2361
BplI	GAGNNNNNCTC	2 cut(s)	728, 760
BpmI	CTGGAG	2 cut(s)	975, 2694
Bpu10I	CCTNAGC	1 cut(s)	1914
Bpu1102I	GCTNAGC	1 cut(s)	1337
Bpu14I	TTCGAA	2 cut(s)	369, 2634
BpuEI	CTTGAG	2 cut(s)	1139, 2280
BpuMI	CCSGG	6 cut(s)	568, 713, 748, 775, 1273, 2330
BsaAI	YACGTR	4 cut(s)	575, 897, 2449, 2758
BsaBI	GATNNNNATC	2 cut(s)	1533, 2704
BsaHI	GRCGYC	3 cut(s)	155, 214, 675
BsaJI	CCNNGG	6 cut(s)	150, 952, 1560, 1577, 2320, 2421
BsaWI	WCCGGW	4 cut(s)	731, 871, 909, 1860
Bse118I	RCCGGY	1 cut(s)	1110
Bse1I	ACTGG	2 cut(s)	842, 2696
Bse21I	CCTNAGG	1 cut(s)	2343
Bse3DI	GCAATG	2 cut(s)	2202, 2244
Bse8I	GATNNNNATC	2 cut(s)	1533, 2704
BseAI	TCCGGA	2 cut(s)	871, 909
BseBI	CCWGG	3 cut(s)	954, 1744, 1982
BseDI	CCNNGG	6 cut(s)	150, 952, 1560, 1577, 2320, 2421
BseGI	GGATG	6 cut(s)	46, 65, 336, 1977, 2290, 2560
BseJI	GATNNNNATC	2 cut(s)	1533, 2704
BseMI	GCAATG	2 cut(s)	2202, 2244
BseMII	CTCAG	7 cut(s)	678, 1676, 1887, 1905, 2334, 2496, 2634
BseNI	ACTGG	2 cut(s)	842, 2696
BseRI	GAGGAG	4 cut(s)	175, 338, 442, 1184
BseX3I	CGGCCG	1 cut(s)	1112
BseXI	GCAGC	6 cut(s)	407, 948, 1104, 1600, 1897, 2533
BseYI	CCCAGC	2 cut(s)	231, 266
BsgI	GTGCAG	1 cut(s)	326
Bsh1236I	CGCG	4 cut(s)	944, 1123, 1125, 1663
Bsh1285I	CGRYCG	2 cut(s)	1115, 2778
BshFI	GGCC	9 cut(s)	308, 1114, 1609, 1905, 1919, 2053, 2170, 2603, 2781
BshNI	GGYRCC	1 cut(s)	154
BsiEI	CGRYCG	2 cut(s)	1115, 2778
BsiHKAI	GWGCWC	4 cut(s)	615, 741, 879, 1491
BsiHKCI	CYCGRG	2 cut(s)	650, 1484
BslFI	GGGAC	6 cut(s)	533, 608, 1214, 1267, 2785, 2805
BsmAI	GTCTC	2 cut(s)	92, 187
BsmBI	CGTCTC	2 cut(s)	92, 187
BsmFI	GGGAC	6 cut(s)	533, 608, 1214, 1267, 2785, 2805
BsmI	GAATGC	2 cut(s)	1288, 1962
BsnI	GGCC	9 cut(s)	308, 1114, 1609, 1905, 1919, 2053, 2170, 2603, 2781
BsoBI	CYCGRG	2 cut(s)	650, 1484
Bsp119I	TTCGAA	2 cut(s)	369, 2634
Bsp1286I	GDGCHC	5 cut(s)	615, 741, 879, 1491, 2288
Bsp13I	TCCGGA	2 cut(s)	871, 909
Bsp1407I	TGTACA	3 cut(s)	284, 846, 993
Bsp1720I	GCTNAGC	1 cut(s)	1337
Bsp19I	CCATGG	1 cut(s)	1577
BspANI	GGCC	9 cut(s)	308, 1114, 1609, 1905, 1919, 2053, 2170, 2603, 2781
BspCNI	CTCAG	7 cut(s)	679, 1677, 1886, 1906, 2335, 2497, 2635
BspEI	TCCGGA	2 cut(s)	871, 909
BspFNI	CGCG	4 cut(s)	944, 1123, 1125, 1663
BspHI	TCATGA	1 cut(s)	579
BspMAI	CTGCAG	2 cut(s)	2730, 2790
BspMI	ACCTGC	1 cut(s)	348
BspOI	GCTAGC	1 cut(s)	1329
BspQI	GCTCTTC	1 cut(s)	2631
BspT104I	TTCGAA	2 cut(s)	369, 2634
BspT107I	GGYRCC	1 cut(s)	154
BsrBI	CCGCTC	4 cut(s)	53, 328, 907, 2566
BsrDI	GCAATG	2 cut(s)	2202, 2244
BsrFI	RCCGGY	1 cut(s)	1110
BsrGI	TGTACA	3 cut(s)	284, 846, 993
BsrI	ACTGG	2 cut(s)	842, 2696
BssAI	RCCGGY	1 cut(s)	1110
BssECI	CCNNGG	6 cut(s)	150, 952, 1560, 1577, 2320, 2421
BssNI	GRCGYC	3 cut(s)	155, 214, 675
BssSI	CACGAG	1 cut(s)	159
BssT1I	CCWWGG	4 cut(s)	1560, 1577, 2320, 2421
Bst2BI	CACGAG	1 cut(s)	159
Bst2UI	CCWGG	3 cut(s)	954, 1744, 1982
Bst6I	CTCTTC	3 cut(s)	2216, 2631, 2690
BstACI	GRCGYC	3 cut(s)	155, 214, 675
BstAPI	GCANNNNNTGC	2 cut(s)	1588, 2230
BstAUI	TGTACA	3 cut(s)	284, 846, 993
BstBAI	YACGTR	4 cut(s)	575, 897, 2449, 2758
BstBI	TTCGAA	2 cut(s)	369, 2634
BstDSI	CCRYGG	1 cut(s)	1577
BstEII	GGTNACC	2 cut(s)	2324, 2732
BstF5I	GGATG	6 cut(s)	46, 65, 336, 1977, 2290, 2560
BstFNI	CGCG	4 cut(s)	944, 1123, 1125, 1663
BstH2I	RGCGCY	3 cut(s)	158, 412, 687
BstHHI	GCGC	7 cut(s)	157, 411, 634, 686, 946, 1045, 1125
BstMAI	GTCTC	2 cut(s)	92, 187
BstMCI	CGRYCG	2 cut(s)	1115, 2778
BstNI	CCWGG	3 cut(s)	954, 1744, 1982
BstNSI	RCATGY	2 cut(s)	400, 1850
BstPAI	GACNNNNGTC	2 cut(s)	560, 575
BstPI	GGTNACC	2 cut(s)	2324, 2732
BstSCI	CCNGG	9 cut(s)	566, 711, 746, 773, 952, 1271, 1742, 1980, 2328
BstSFI	CTRYAG	3 cut(s)	1594, 2726, 2786
BstSNI	TACGTA	1 cut(s)	2449
BstUI	CGCG	4 cut(s)	944, 1123, 1125, 1663
BstV1I	GCAGC	6 cut(s)	407, 948, 1104, 1600, 1897, 2533
BstV2I	GAAGAC	3 cut(s)	477, 1803, 2361
BstX2I	RGATCY	6 cut(s)	708, 868, 1831, 1991, 2459, 2831
BstXI	CCANNNNNNTGG	1 cut(s)	2428
BstYI	RGATCY	6 cut(s)	708, 868, 1831, 1991, 2459, 2831
BstZI	CGGCCG	1 cut(s)	1112
Bsu36I	CCTNAGG	1 cut(s)	2343
BsuI	GTATCC	4 cut(s)	1740, 2341, 2634, 2757
BsuRI	GGCC	9 cut(s)	308, 1114, 1609, 1905, 1919, 2053, 2170, 2603, 2781
BtgI	CCRYGG	1 cut(s)	1577
BtgZI	GCGATG	1 cut(s)	1836
BtrI	CACGTC	1 cut(s)	661
BtsCI	GGATG	6 cut(s)	46, 65, 336, 1977, 2290, 2560
BtsI	GCAGTG	3 cut(s)	287, 608, 946
BtsIMutI	CAGTG	9 cut(s)	287, 608, 849, 946, 1512, 1591, 1880, 2261, 2502
BveI	ACCTGC	1 cut(s)	348
CaiI	CAGNNNCTG	1 cut(s)	2075
CciI	TCATGA	1 cut(s)	579
CfoI	GCGC	7 cut(s)	157, 411, 634, 686, 946, 1045, 1125
Cfr10I	RCCGGY	1 cut(s)	1110
Cfr13I	GGNCC	6 cut(s)	547, 767, 1607, 1863, 2601, 2780
CseI	GACGC	4 cut(s)	222, 950, 1264, 2355
DinI	GGCGCC	1 cut(s)	156
DraI	TTTAAA	1 cut(s)	126
DraIII	CACNNNGTG	1 cut(s)	1087
DrdI	GACNNNNNNGTC	1 cut(s)	533
DriI	GACNNNNNGTC	2 cut(s)	1207, 2365
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	4 cut(s)	306, 1112, 1903, 2051
EagI	CGGCCG	1 cut(s)	1112
Eam1104I	CTCTTC	3 cut(s)	2216, 2631, 2690
Eam1105I	GACNNNNNGTC	2 cut(s)	1207, 2365
EarI	CTCTTC	3 cut(s)	2216, 2631, 2690
EciI	GGCGGA	6 cut(s)	404, 454, 495, 731, 1016, 1984
Ecl136II	GAGCTC	1 cut(s)	739
EclXI	CGGCCG	1 cut(s)	1112
Eco105I	TACGTA	1 cut(s)	2449
Eco130I	CCWWGG	4 cut(s)	1560, 1577, 2320, 2421
Eco24I	GRGCYC	2 cut(s)	741, 2288
Eco32I	GATATC	1 cut(s)	2585
Eco47I	GGWCC	3 cut(s)	547, 767, 1863
Eco47III	AGCGCT	1 cut(s)	410
Eco52I	CGGCCG	1 cut(s)	1112
Eco53kI	GAGCTC	1 cut(s)	739
Eco57I	CTGAAG	1 cut(s)	2193
Eco72I	CACGTG	1 cut(s)	575
Eco81I	CCTNAGG	1 cut(s)	2343
Eco88I	CYCGRG	2 cut(s)	650, 1484
Eco91I	GGTNACC	2 cut(s)	2324, 2732
EcoICRI	GAGCTC	1 cut(s)	739
EcoO65I	GGTNACC	2 cut(s)	2324, 2732
EcoRII	CCWGG	3 cut(s)	952, 1742, 1980
EcoRV	GATATC	1 cut(s)	2585
EcoT14I	CCWWGG	4 cut(s)	1560, 1577, 2320, 2421
EcoT22I	ATGCAT	2 cut(s)	1720, 2050
EcoT38I	GRGCYC	2 cut(s)	741, 2288
EgeI	GGCGCC	1 cut(s)	156
EheI	GGCGCC	1 cut(s)	156
ErhI	CCWWGG	4 cut(s)	1560, 1577, 2320, 2421
Esp3I	CGTCTC	2 cut(s)	92, 187
FalI	AAGNNNNNCTT	4 cut(s)	599, 631, 1214, 1246
FaqI	GGGAC	6 cut(s)	533, 608, 1214, 1267, 2785, 2805
FauI	CCCGC	7 cut(s)	58, 301, 383, 606, 633, 856, 912
FauNDI	CATATG	2 cut(s)	1618, 2044
FokI	GGATG	6 cut(s)	33, 52, 343, 1964, 2277, 2547
FriOI	GRGCYC	2 cut(s)	741, 2288
FspBI	CTAG	1 cut(s)	1326
GlaI	GCGC	7 cut(s)	156, 410, 633, 685, 945, 1044, 1124
GsaI	CCCAGC	2 cut(s)	235, 270
GsuI	CTGGAG	2 cut(s)	975, 2694
HaeII	RGCGCY	3 cut(s)	158, 412, 687
HaeIII	GGCC	9 cut(s)	308, 1114, 1609, 1905, 1919, 2053, 2170, 2603, 2781
HgaI	GACGC	4 cut(s)	222, 950, 1264, 2355
HhaI	GCGC	7 cut(s)	157, 411, 634, 686, 946, 1045, 1125
Hin1I	GRCGYC	3 cut(s)	155, 214, 675
Hin6I	GCGC	7 cut(s)	155, 409, 632, 684, 944, 1043, 1123
HinP1I	GCGC	7 cut(s)	155, 409, 632, 684, 944, 1043, 1123
HincII	GTYRAC	2 cut(s)	28, 1314
HindII	GTYRAC	2 cut(s)	28, 1314
HindIII	AAGCTT	1 cut(s)	1334
HpaI	GTTAAC	1 cut(s)	28
HphI	GGTGA	7 cut(s)	418, 511, 529, 1366, 1538, 2189, 2726
Hpy166II	GTNNAC	9 cut(s)	28, 287, 822, 847, 994, 1057, 1314, 1402, 2718
Hpy8I	GTNNAC	9 cut(s)	28, 287, 822, 847, 994, 1057, 1314, 1402, 2718
Hpy99I	CGWCG	3 cut(s)	216, 566, 677
HpyAV	CCTTC	8 cut(s)	152, 601, 907, 982, 1663, 1687, 1815, 2168
Hsp92I	GRCGYC	3 cut(s)	155, 214, 675
HspAI	GCGC	7 cut(s)	155, 409, 632, 684, 944, 1043, 1123
KasI	GGCGCC	1 cut(s)	154
Kpn2I	TCCGGA	2 cut(s)	871, 909
KroI	GCCGGC	1 cut(s)	1110
KroNI	GCCGGC	1 cut(s)	1112
KspAI	GTTAAC	1 cut(s)	28
LguI	GCTCTTC	1 cut(s)	2631
LmnI	GCTCC	8 cut(s)	325, 610, 874, 912, 926, 1102, 1570, 2072
Lsp1109I	GCAGC	6 cut(s)	407, 948, 1104, 1600, 1897, 2533
LweI	GCATC	9 cut(s)	502, 1054, 1128, 1705, 1746, 1933, 2353, 2605, 2617
MaeI	CTAG	1 cut(s)	1326
MaeIII	GTNAC	6 cut(s)	535, 541, 890, 2324, 2592, 2732
MbiI	CCGCTC	4 cut(s)	53, 328, 907, 2566
MflI	RGATCY	6 cut(s)	708, 868, 1831, 1991, 2459, 2831
MhlI	GDGCHC	5 cut(s)	615, 741, 879, 1491, 2288
MlsI	TGGCCA	1 cut(s)	2053
MluNI	TGGCCA	1 cut(s)	2053
Mly113I	GGCGCC	1 cut(s)	155
MlyI	GAGTC	4 cut(s)	326, 521, 788, 1865
MmeI	TCCRAC	5 cut(s)	300, 957, 1146, 1342, 1628
Mox20I	TGGCCA	1 cut(s)	2053
Mph1103I	ATGCAT	2 cut(s)	1720, 2050
MroI	TCCGGA	2 cut(s)	871, 909
MroNI	GCCGGC	1 cut(s)	1110
MroXI	GAANNNNTTC	3 cut(s)	1280, 2337, 2699
MscI	TGGCCA	1 cut(s)	2053
MseI	TTAA	7 cut(s)	8, 27, 125, 645, 1521, 2105, 2124
MslI	CAYNNNNRTG	6 cut(s)	395, 1707, 1713, 2047, 2613, 2760
Msp20I	TGGCCA	1 cut(s)	2053
MspA1I	CMGCKG	3 cut(s)	420, 628, 1117
MspR9I	CCNGG	9 cut(s)	568, 713, 748, 775, 954, 1273, 1744, 1982, 2330
Mva1269I	GAATGC	2 cut(s)	1288, 1962
MvaI	CCWGG	3 cut(s)	954, 1744, 1982
MvnI	CGCG	4 cut(s)	944, 1123, 1125, 1663
NaeI	GCCGGC	1 cut(s)	1112
NarI	GGCGCC	1 cut(s)	155
NciI	CCSGG	6 cut(s)	568, 713, 748, 775, 1273, 2330
NcoI	CCATGG	1 cut(s)	1577
NdeI	CATATG	2 cut(s)	1618, 2044
NgoMIV	GCCGGC	1 cut(s)	1110
NheI	GCTAGC	1 cut(s)	1325
NmeAIII	GCCGAG	4 cut(s)	776, 1122, 1131, 2629
NmuCI	GTSAC	3 cut(s)	535, 2592, 2732
NsiI	ATGCAT	2 cut(s)	1720, 2050
NspI	RCATGY	2 cut(s)	400, 1850
NspV	TTCGAA	2 cut(s)	369, 2634
PaeR7I	CTCGAG	1 cut(s)	650
PagI	TCATGA	1 cut(s)	579
PciI	ACATGT	1 cut(s)	396
PciSI	GCTCTTC	1 cut(s)	2631
PcsI	WCGNNNNNNNCGW	4 cut(s)	208, 306, 351, 657
PctI	GAATGC	2 cut(s)	1288, 1962
PdiI	GCCGGC	1 cut(s)	1112
PdmI	GAANNNNTTC	3 cut(s)	1280, 2337, 2699
PfeI	GAWTC	8 cut(s)	723, 970, 1096, 1942, 2139, 2278, 2381, 2700
PflFI	GACNNNGTC	1 cut(s)	674
PflMI	CCANNNNNTGG	1 cut(s)	304
PfoI	TCCNGGA	2 cut(s)	773, 1742
PleI	GAGTC	4 cut(s)	325, 521, 788, 1865
PluTI	GGCGCC	1 cut(s)	158
PmaCI	CACGTG	1 cut(s)	575
PmlI	CACGTG	1 cut(s)	575
PpsI	GAGTC	4 cut(s)	325, 521, 788, 1865
Ppu21I	YACGTR	4 cut(s)	575, 897, 2449, 2758
PscI	ACATGT	1 cut(s)	396
PshAI	GACNNNNGTC	2 cut(s)	560, 575
PsiI	TTATAA	3 cut(s)	1346, 1631, 2061
Psp124BI	GAGCTC	1 cut(s)	741
Psp1406I	AACGTT	1 cut(s)	1645
Psp6I	CCWGG	3 cut(s)	952, 1742, 1980
PspCI	CACGTG	1 cut(s)	575
PspEI	GGTNACC	2 cut(s)	2324, 2732
PspFI	CCCAGC	2 cut(s)	231, 266
PspGI	CCWGG	3 cut(s)	952, 1742, 1980
PspPI	GGNCC	6 cut(s)	547, 767, 1607, 1863, 2601, 2780
PspXI	VCTCGAGB	1 cut(s)	650
PstI	CTGCAG	2 cut(s)	2730, 2790
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	6 cut(s)	708, 868, 1831, 1991, 2459, 2831
PsyI	GACNNNGTC	1 cut(s)	674
RseI	CAYNNNNRTG	6 cut(s)	395, 1707, 1713, 2047, 2613, 2760
SacI	GAGCTC	1 cut(s)	741
SapI	GCTCTTC	1 cut(s)	2631
SaqAI	TTAA	7 cut(s)	8, 27, 125, 645, 1521, 2105, 2124
Sau96I	GGNCC	6 cut(s)	547, 767, 1607, 1863, 2601, 2780
SbfI	CCTGCAGG	1 cut(s)	2790
ScaI	AGTACT	1 cut(s)	2248
SchI	GAGTC	4 cut(s)	326, 521, 788, 1865
ScrFI	CCNGG	9 cut(s)	568, 713, 748, 775, 954, 1273, 1744, 1982, 2330
SdaI	CCTGCAGG	1 cut(s)	2790
SduI	GDGCHC	5 cut(s)	615, 741, 879, 1491, 2288
SfaNI	GCATC	9 cut(s)	502, 1054, 1128, 1705, 1746, 1933, 2353, 2605, 2617
SfcI	CTRYAG	3 cut(s)	1594, 2726, 2786
SfoI	GGCGCC	1 cut(s)	156
Sfr274I	CTCGAG	1 cut(s)	650
SfuI	TTCGAA	2 cut(s)	369, 2634
SinI	GGWCC	3 cut(s)	547, 767, 1863
SlaI	CTCGAG	1 cut(s)	650
SmiMI	CAYNNNNRTG	6 cut(s)	395, 1707, 1713, 2047, 2613, 2760
SmlI	CTYRAG	3 cut(s)	650, 1154, 2295
SmoI	CTYRAG	3 cut(s)	650, 1154, 2295
SnaBI	TACGTA	1 cut(s)	2449
Sse8387I	CCTGCAGG	1 cut(s)	2790
SspDI	GGCGCC	1 cut(s)	154
SspI	AATATT	1 cut(s)	2454
SspMI	CTAG	1 cut(s)	1326
SstI	GAGCTC	1 cut(s)	741
StyD4I	CCNGG	9 cut(s)	566, 711, 746, 773, 952, 1271, 1742, 1980, 2328
StyI	CCWWGG	4 cut(s)	1560, 1577, 2320, 2421
TaqI	TCGA	8 cut(s)	354, 369, 651, 810, 831, 2016, 2587, 2634
TaqII	GACCGA	1 cut(s)	2558
TatI	WGTACW	6 cut(s)	284, 846, 993, 1158, 1781, 2246
TauI	GCSGC	7 cut(s)	381, 420, 1093, 1117, 1123, 1128, 1131
TfiI	GAWTC	8 cut(s)	723, 970, 1096, 1942, 2139, 2278, 2381, 2700
Tru1I	TTAA	7 cut(s)	8, 27, 125, 645, 1521, 2105, 2124
Tru9I	TTAA	7 cut(s)	8, 27, 125, 645, 1521, 2105, 2124
TscAI	CASTG	9 cut(s)	294, 608, 849, 953, 1519, 1598, 1887, 2268, 2509
TseFI	GTSAC	3 cut(s)	535, 2592, 2732
TseI	GCWGC	6 cut(s)	420, 961, 1117, 1613, 1910, 2546
Tsp45I	GTSAC	3 cut(s)	535, 2592, 2732
TspGWI	ACGGA	7 cut(s)	45, 74, 329, 780, 913, 1052, 2830
TspRI	CASTG	9 cut(s)	294, 608, 849, 953, 1519, 1598, 1887, 2268, 2509
Tth111I	GACNNNGTC	1 cut(s)	674
Van91I	CCANNNNNTGG	1 cut(s)	304
VpaK11BI	GGWCC	3 cut(s)	547, 767, 1863
XapI	RAATTY	2 cut(s)	2205, 2847
XceI	RCATGY	2 cut(s)	400, 1850
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1575
XhoI	CTCGAG	1 cut(s)	650
XmnI	GAANNNNTTC	3 cut(s)	1280, 2337, 2699
XspI	CTAG	1 cut(s)	1326
ZraI	GACGTC	1 cut(s)	676
ZrmI	AGTACT	1 cut(s)	2248
Zsp2I	ATGCAT	2 cut(s)	1720, 2050

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.