FvH4_1g19320

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000503
Physical Location & Seq
Forward (+)
11541611 .. 11553100
11490 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g19320.t6

Sequence Viewer

Length: 3162 bp
ATGGAAACTGATAGTCAAATTGAGCTTAGTAGGCAGAACAATATGCTTCCCCCACAAGCTGGAACATTTCTAGATCGTGAAGACCTCATCCAATATGTTCGTGATTTTGGTGCCAGTCAAGGATATGTGGTGACCATCAAGAAGTCGAGGAAAGACAGGAGAGTCATCCTTGGTTGTGATAGGGGAGGTGTTTATCGTAATAGGCGTAAAATTGATGAAAGCAAACGCAAAAGGAAGGCAAATTCACGCCTGATAAACTGTCCCTTTGAAGCCATAGGGAAAAGGGAAGATGATTCGTGGGTACTCACAATAAGGAATGGGGAGCATAACCATGAAGCATTAAAGGACATGTCTGAGCATCCTTATAGTCGTCGCTTTACTGAGGAAGAGGTCAGGCAAATCAAGCAAATGACTGAAGCTGGCATAAAACCACGTCTAGTTCTTAAGGCTCTCAAGCAAATGAATCCTGAACTGCAGTCAACACCAAGGCATCTGTATAACCTCAAAGCAAAGATACGTCAAGGAACTCTATCAGAGAAAAGTTTCAAGACATGGAGACCTGACAGGTCCGCTTTGGTGAATACAAGTTCTGCTCCCAGTGGGCGGTCATTGATGCAAAGTAACCAGCCGCTGAAGGTTCCTAATTTTATTGGAGGAAAATTTGTTGATTCACAAGGATGTTCAATCATTGACGTAGTAAATCCTGCAACACAAGATACTGTTTCTCATGTTCCTCTAACTACCTATGAAGAGTTCAAAGCTGCAGTTACTTCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACACCTATTACAACACGTCAAAGAATTCTGTTTAAGCTTCAGGACCTCATCCGCAGAGACATTGATAAACTTGCCATGAATATCACCTTAGAGCAGGGTAAGACGTTGAAGGGTGCTGAGAGTGATGTGCTCCGTGGTATAGAGGTGGTCGAACATGCTTGTGGGATGGCAACTCTACAGATGGGGGAGTTTGTTCCTAATGCATCTTATGGTATTGATACATACTCCATTAGGGAGCCACTTGGTGTTTGTGCGGGGATATGCCCCTTCAACTTTCCATCAATGTTTTCCTTATGGATGTTCCCAGTTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAAAATCCAGGAGTTTCGATGATACTTGCAGCACTTGCTAAGGAGGCTGGTTTGCCTGACGGTGTGTTAAATATAGTCCATGGCACTCACGACATTGTTAATTATATCTGTGATGATGATGATATAAAGGCTGTTTCACTTGTTGGCTCAAGTACAGCCGGAATGCATATACATGCAAAGGCGGTTGCTAGGGGAAAGCGTGTCCAGTCCAATATAGGAGGAAAAAATCATGCAATCATCATGCCTGATGCTAGCATGGATGCAACCTTGAATGCTGTGGTCATGGCTGGTTTTGGTGCTGCAGGACAGAGGTCTATGGCTCTTAATACAGTTGTCTTTGTTGGAAACTCAATAACCTGGGAGTGTGAACTGGTGGAACGTGCCAAAGCCCTGAAAGTCAATGTGGGAACAGATCCCAGTGCAGATGTTGGTCCAGTTATTACCAAAGAGGTGAAGGATTGGATATGCAGATTAGTTCAGAGCAGTGTTGAAAGCGGTGCTAGACTCCTTCTTGATGGGAGAAATGTTATGGTTCGAGGCTATGAGAATGGAAACTTCATTGGTCCTACTATCTTATGTGATGTTACAACCAATATGGAATGTTTTAAGGAAGAAATTTTTGGACCGGTTCTTCTGTGCATGCAGGCTGCCAGCCTAGAAGAAGCGATCACAATTATAAAAAGAAACAGGTCTGGCAATGGAGCTTCCATATTCACAACATCTGGCATTGCTGCAAGGAAGTTCCAAAATGAAGTTGAGGCTGGCCTGGTTGGGATCAATGTTCCTGTTCCAGTTCCACTACCACTGTCCTCGTTTAACGGATCTAAGGCATCTTTTGGAAGTGATCTGAATATCTCTGGTAAAGCAGGAGTGCAATTTTACACCCGGATGAAAGCCGTTGCACAACAGTGGAAGGATTTACCTAGCTTAGAATCATCATTAGCCGTGCATCCATTGTATGAGACAAATAGATTAAGCAGAGGTGTCTCATCTTCTTTGCCTTCAACATCTGAGAGAGATTCACCTAGCCGTAGAGTATCAGGAGCCACAAACTCAGAATCTGAGAGTGATTCACCAAGTGAGTTGCCAAGTCGTGGACGTCCGTTGTCCCGCCCTTCGACATCTGAGGCAGCTCTTCCCCCCCAAGGAGCCTCATCTATGACTCAAACAGCATATGATGATTTGTCTAGTCAGGGCCTGTCCCTTGTCATGCCAGCAACATCCGAGAGAGATCTGTCCGGTGTGGATATGTCGCTAGCCATCCCTCGAGCAACAGAAAGGGATATGCCAAAACAAGGTTTCACATTGACATCTTTGCAGTCGACAGAGAGAATCTATATGCCCCAAACTTCTCACTGGATGGAAACCTCAAGACCGACATCTCAAAGGATTGAAAACGGTCCACCAAGTTCTGAGAGGCATTTTGCGTCCACGTCTCAGAGGAATGATGAGAATAGCAACACGTCATTGTCATTTCAAAGGACTGGTACTTCTATGCCATTGACATCTGATAGTGTCTATGCACCTGCCTCCCAGGACAATATGGCTGTAATATCACTCCGAAATGATGGTACGAGCGCAATATCTCAGAGGACGGATCCCACACTACTTCCAACCTCTGAGAGGGCATACGTACTTGGAGCAGCTCACTTGAATGACAATAGGGTTCAAACATTTCACAGGCTCGACTCCACCATGTTTTCAACATCTGATAGGATGTACATGCTCGCAAAATCCCATCAGCAAGACAATATGGGTTCAACATCTCGGAGAACTGATATTCCTATGCATTCAACTTCGGAGAAGATGTTCATGTCAACAGCATCTCAAAGGACTGAGGAATTAGCTGTTGCTTCTCAACCAGCCTCTGAGAAATTATATTTGTCTCCATTAGTTCCAAGAAATGCTGGTATGCCTCAGAAGATGTTTCCCCAAAACTCAATTTTGAGTGATGAATTTCCCACACAAGGAGCATCACTGACTTTACCTACATCTCAGAGGATATAG

Protein Analysis

1054

Amino Acids

115.46

Weight (kDa)

8.71

Isoelectric Point (pI)

53.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 17 - 481 2e-130 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1832
AarI CACCTGC 1 cut(s) 2689
AasI GACNNNNNNGTC 1 cut(s) 161
AatII GACGTC 1 cut(s) 2257
Acc36I ACCTGC 1 cut(s) 2689
AccB1I GGYRCC 1 cut(s) 110
AccB7I CCANNNNNTGG 2 cut(s) 59, 2249
AccI GTMKAC 1 cut(s) 2477
AciI CCGC 8 cut(s) 570, 604, 629, 856, 1058, 1337, 1650, 2266
AclWI GGATC 5 cut(s) 1562, 1937, 1984, 2747, 2760
AcsI RAATTY 5 cut(s) 241, 659, 828, 1770, 3110
AcuI CTGAAG 4 cut(s) 435, 653, 756, 827
AcyI GRCGYC 1 cut(s) 2254
AdeI CACNNNGTG 2 cut(s) 1049, 2234
AfaI GTAC 6 cut(s) 303, 1309, 2644, 2728, 2790, 2876
AfiI CCNNNNNNNGG 7 cut(s) 59, 603, 2249, 2300, 2450, 2778, 3122
AflII CTTAAG 2 cut(s) 443, 1142
AflIII ACRYGT 4 cut(s) 348, 818, 1121, 2616
AgeI ACCGGT 1 cut(s) 1780
AjiI CACGTC 4 cut(s) 434, 821, 2589, 2619
AjnI CCWGG 4 cut(s) 1162, 1511, 1920, 2688
AjuI GAANNNNNNNTTGG 2 cut(s) 1758, 1790
AleI CACNNNNGTG 1 cut(s) 2062
AloI GAACNNNNNNTCC 4 cut(s) 2920, 2948, 2952, 2980
Alw21I GWGCWC 1 cut(s) 936
Alw26I GTCTC 6 cut(s) 550, 855, 2111, 2146, 2595, 3045
AlwI GGATC 5 cut(s) 1562, 1937, 1984, 2747, 2760
AlwNI CAGNNNCTG 4 cut(s) 631, 2216, 2353, 3023
Ama87I CYCGRG 1 cut(s) 2421
AoxI GGCC 2 cut(s) 1918, 2350
ApeKI GCWGC 7 cut(s) 761, 1184, 1454, 1802, 1886, 2285, 2798
ApoI RAATTY 5 cut(s) 241, 659, 828, 1770, 3110
AsiGI ACCGGT 1 cut(s) 1780
Asp700I GAANNNNTTC 2 cut(s) 542, 2963
AspLEI GCGC 1 cut(s) 2735
AspS9I GGNCC 7 cut(s) 567, 847, 1586, 1718, 1778, 2350, 2555
AsuC2I CCSGG 1 cut(s) 2041
AsuHPI GGTGA 6 cut(s) 142, 589, 880, 1618, 2169, 2220
AsuNHI GCTAGC 2 cut(s) 1406, 2410
AvaI CYCGRG 1 cut(s) 2421
AvaII GGWCC 6 cut(s) 567, 847, 1586, 1718, 1778, 2555
BamHI GGATCC 1 cut(s) 2752
BanI GGYRCC 1 cut(s) 110
BbsI GAAGAC 1 cut(s) 87
Bbv12I GWGCWC 1 cut(s) 936
BbvI GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2297, 2810
BccI CCATC 9 cut(s) 143, 964, 979, 1090, 1664, 2423, 2509, 2717, 2901
BceAI ACGGC 3 cut(s) 2036, 2084, 2169
BciT130I CCWGG 4 cut(s) 1164, 1513, 1922, 2690
BcnI CCSGG 1 cut(s) 2041
BcoDI GTCTC 6 cut(s) 550, 855, 2111, 2146, 2595, 3045
BfmI CTRYAG 4 cut(s) 473, 762, 980, 1455
BfrI CTTAAG 2 cut(s) 443, 1142
BfuAI ACCTGC 1 cut(s) 2689
BglII AGATCT 1 cut(s) 2386
BisI GCNGC 8 cut(s) 629, 762, 1185, 1455, 1803, 1887, 2286, 2799
BlsI GCNGC 8 cut(s) 630, 763, 1186, 1456, 1804, 1888, 2287, 2800
Bme1390I CCNGG 5 cut(s) 1164, 1513, 1922, 2041, 2690
Bme18I GGWCC 6 cut(s) 567, 847, 1586, 1718, 1778, 2555
BmeT110I CYCGRG 1 cut(s) 2421
BmgBI CACGTC 4 cut(s) 434, 821, 2589, 2619
BmgT120I GGNCC 7 cut(s) 567, 847, 1586, 1718, 1778, 2350, 2555
BmiI GGNNCC 6 cut(s) 112, 639, 1041, 2200, 2305, 2754
BmrFI CCNGG 5 cut(s) 1164, 1513, 1922, 2041, 2690
BmrI ACTGGG 3 cut(s) 591, 1103, 1566
BmtI GCTAGC 2 cut(s) 1410, 2414
BmuI ACTGGG 3 cut(s) 591, 1103, 1566
BoxI GACNNNNGTC 1 cut(s) 1465
BpiI GAAGAC 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 1194
BpuEI CTTGAG 3 cut(s) 437, 1288, 2509
BpuMI CCSGG 1 cut(s) 2041
BsaAI YACGTR 1 cut(s) 2788
BsaHI GRCGYC 1 cut(s) 2254
BsaI GGTCTC 1 cut(s) 550
BsaJI CCNNGG 7 cut(s) 169, 485, 937, 1234, 1512, 2299, 2688
BsaWI WCCGGW 2 cut(s) 1780, 2393
BsaXI ACNNNNNCTCC 2 cut(s) 2948, 2978
Bsc4I CCNNNNNNNGG 7 cut(s) 59, 603, 2249, 2300, 2450, 2778, 3122
Bse118I RCCGGY 1 cut(s) 1780
Bse3DI GCAATG 2 cut(s) 1858, 1881
BseBI CCWGG 4 cut(s) 1164, 1513, 1922, 2690
BseDI CCNNGG 7 cut(s) 169, 485, 937, 1234, 1512, 2299, 2688
BseLI CCNNNNNNNGG 7 cut(s) 59, 603, 2249, 2300, 2450, 2778, 3122
BseMI GCAATG 2 cut(s) 1858, 1881
BseXI GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2297, 2810
BsgI GTGCAG 1 cut(s) 1596
BshFI GGCC 2 cut(s) 1920, 2352
BshNI GGYRCC 1 cut(s) 110
BshTI ACCGGT 1 cut(s) 1780
BsiHKAI GWGCWC 1 cut(s) 936
BsiHKCI CYCGRG 1 cut(s) 2421
BsiSI CCGG 4 cut(s) 1314, 1781, 2041, 2394
BslFI GGGAC 3 cut(s) 246, 2248, 2341
BslI CCNNNNNNNGG 7 cut(s) 59, 603, 2249, 2300, 2450, 2778, 3122
BsmAI GTCTC 6 cut(s) 550, 855, 2111, 2146, 2595, 3045
BsmBI CGTCTC 1 cut(s) 2595
BsmFI GGGAC 3 cut(s) 246, 2248, 2341
BsmI GAATGC 3 cut(s) 1323, 1432, 2944
BsnI GGCC 2 cut(s) 1920, 2352
Bso31I GGTCTC 1 cut(s) 550
BsoBI CYCGRG 1 cut(s) 2421
Bsp1286I GDGCHC 1 cut(s) 936
Bsp1407I TGTACA 1 cut(s) 2874
Bsp143I GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
Bsp19I CCATGG 1 cut(s) 1234
BspACI CCGC 8 cut(s) 570, 604, 629, 856, 1058, 1337, 1650, 2266
BspANI GGCC 2 cut(s) 1920, 2352
BspLI GGNNCC 6 cut(s) 112, 639, 1041, 2200, 2305, 2754
BspMAI CTGCAG 3 cut(s) 477, 766, 1459
BspMI ACCTGC 1 cut(s) 2689
BspOI GCTAGC 2 cut(s) 1410, 2414
BspPI GGATC 5 cut(s) 1562, 1937, 1984, 2747, 2760
BspQI GCTCTTC 1 cut(s) 2295
BspT107I GGYRCC 1 cut(s) 110
BspTI CTTAAG 2 cut(s) 443, 1142
BspTNI GGTCTC 1 cut(s) 550
BsrDI GCAATG 2 cut(s) 1858, 1881
BsrFI RCCGGY 1 cut(s) 1780
BsrGI TGTACA 1 cut(s) 2874
BssAI RCCGGY 1 cut(s) 1780
BssECI CCNNGG 7 cut(s) 169, 485, 937, 1234, 1512, 2299, 2688
BssMI GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
BssNI GRCGYC 1 cut(s) 2254
BssT1I CCWWGG 4 cut(s) 169, 485, 1234, 2299
Bst2UI CCWGG 4 cut(s) 1164, 1513, 1922, 2690
Bst4CI ACNGT 7 cut(s) 260, 721, 1217, 1486, 1962, 2064, 2555
Bst6I CTCTTC 3 cut(s) 381, 744, 2295
BstACI GRCGYC 1 cut(s) 2254
BstAFI CTTAAG 2 cut(s) 443, 1142
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstAUI TGTACA 1 cut(s) 2874
BstBAI YACGTR 1 cut(s) 2788
BstDSI CCRYGG 2 cut(s) 937, 1234
BstEII GGTNACC 1 cut(s) 130
BstENI CCTNNNNNAGG 1 cut(s) 2776
BstHHI GCGC 1 cut(s) 2735
BstKTI GATC 8 cut(s) 76, 1570, 1824, 1932, 1979, 2002, 2389, 2755
BstMAI GTCTC 6 cut(s) 550, 855, 2111, 2146, 2595, 3045
BstMBI GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
BstMWI GCNNNNNNNGC 5 cut(s) 31, 403, 782, 1190, 1199
BstNI CCWGG 4 cut(s) 1164, 1513, 1922, 2690
BstNSI RCATGY 6 cut(s) 352, 962, 1125, 1331, 1798, 2881
BstPAI GACNNNNGTC 1 cut(s) 1465
BstPI GGTNACC 1 cut(s) 130
BstSCI CCNGG 5 cut(s) 1162, 1511, 1920, 2039, 2688
BstSFI CTRYAG 4 cut(s) 473, 762, 980, 1455
BstSNI TACGTA 1 cut(s) 2788
BstV1I GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2297, 2810
BstV2I GAAGAC 1 cut(s) 87
BstX2I RGATCY 4 cut(s) 1567, 1976, 2386, 2752
BstYI RGATCY 4 cut(s) 1567, 1976, 2386, 2752
BsuRI GGCC 2 cut(s) 1920, 2352
BtgI CCRYGG 2 cut(s) 937, 1234
BtrI CACGTC 4 cut(s) 434, 821, 2589, 2619
BtsI GCAGTG 1 cut(s) 1645
BtsIMutI CAGTG 7 cut(s) 604, 1579, 1645, 1958, 2069, 2509, 3131
BveI ACCTGC 1 cut(s) 2689
CaiI CAGNNNCTG 4 cut(s) 631, 2216, 2353, 3023
CfoI GCGC 1 cut(s) 2735
Cfr10I RCCGGY 1 cut(s) 1780
Cfr13I GGNCC 7 cut(s) 567, 847, 1586, 1718, 1778, 2350, 2555
CseI GACGC 1 cut(s) 2571
Csp6I GTAC 6 cut(s) 302, 1308, 2643, 2727, 2789, 2875
CspAI ACCGGT 1 cut(s) 1780
CviQI GTAC 6 cut(s) 302, 1308, 2643, 2727, 2789, 2875
DpnI GATC 8 cut(s) 75, 1569, 1823, 1931, 1978, 2001, 2388, 2754
DpnII GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
DraIII CACNNNGTG 2 cut(s) 1049, 2234
DrdI GACNNNNNNGTC 1 cut(s) 161
DseDI GACNNNNNNGTC 1 cut(s) 161
Eam1104I CTCTTC 3 cut(s) 381, 744, 2295
EarI CTCTTC 3 cut(s) 381, 744, 2295
Eco105I TACGTA 1 cut(s) 2788
Eco130I CCWWGG 4 cut(s) 169, 485, 1234, 2299
Eco31I GGTCTC 1 cut(s) 550
Eco47I GGWCC 6 cut(s) 567, 847, 1586, 1718, 1778, 2555
Eco57I CTGAAG 4 cut(s) 435, 653, 756, 827
Eco88I CYCGRG 1 cut(s) 2421
Eco91I GGTNACC 1 cut(s) 130
EcoNI CCTNNNNNAGG 1 cut(s) 2776
EcoO109I RGGNCCY 2 cut(s) 847, 2350
EcoO65I GGTNACC 1 cut(s) 130
EcoRI GAATTC 1 cut(s) 828
EcoRII CCWGG 4 cut(s) 1162, 1511, 1920, 2688
EcoT14I CCWWGG 4 cut(s) 169, 485, 1234, 2299
EcoT22I ATGCAT 3 cut(s) 1009, 1323, 2946
ErhI CCWWGG 4 cut(s) 169, 485, 1234, 2299
Esp3I CGTCTC 1 cut(s) 2595
FaqI GGGAC 3 cut(s) 246, 2248, 2341
FauI CCCGC 2 cut(s) 1051, 2273
FauNDI CATATG 1 cut(s) 2329
FblI GTMKAC 1 cut(s) 2477
Fnu4HI GCNGC 8 cut(s) 629, 762, 1185, 1455, 1803, 1887, 2286, 2799
Fsp4HI GCNGC 8 cut(s) 629, 762, 1185, 1455, 1803, 1887, 2286, 2799
GlaI GCGC 1 cut(s) 2734
GluI GCNGC 8 cut(s) 629, 762, 1185, 1455, 1803, 1887, 2286, 2799
HaeIII GGCC 2 cut(s) 1920, 2352
HapII CCGG 4 cut(s) 1314, 1781, 2041, 2394
HgaI GACGC 1 cut(s) 2571
HhaI GCGC 1 cut(s) 2735
Hin1I GRCGYC 1 cut(s) 2254
Hin6I GCGC 1 cut(s) 2733
HinP1I GCGC 1 cut(s) 2733
HincII GTYRAC 3 cut(s) 480, 2478, 2973
HindII GTYRAC 3 cut(s) 480, 2478, 2973
HindIII AAGCTT 2 cut(s) 783, 839
HpaII CCGG 4 cut(s) 1314, 1781, 2041, 2394
HphI GGTGA 6 cut(s) 142, 589, 880, 1618, 2169, 2220
Hpy166II GTNNAC 7 cut(s) 480, 1523, 2252, 2478, 2558, 2586, 2973
Hpy8I GTNNAC 7 cut(s) 480, 1523, 2252, 2478, 2558, 2586, 2973
Hpy99I CGWCG 1 cut(s) 375
HpyCH4III ACNGT 7 cut(s) 260, 721, 1217, 1486, 1962, 2064, 2555
HpyF10VI GCNNNNNNNGC 5 cut(s) 31, 403, 782, 1190, 1199
Hsp92I GRCGYC 1 cut(s) 2254
HspAI GCGC 1 cut(s) 2733
Kzo9I GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
LguI GCTCTTC 1 cut(s) 2295
LmnI GCTCC 9 cut(s) 322, 598, 939, 1039, 1856, 2198, 2303, 2795, 3125
Lsp1109I GCAGC 7 cut(s) 748, 1196, 1441, 1789, 1873, 2297, 2810
MaeIII GTNAC 5 cut(s) 130, 620, 766, 1117, 1738
MalI GATC 8 cut(s) 75, 1569, 1823, 1931, 1978, 2001, 2388, 2754
MboI GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
MflI RGATCY 4 cut(s) 1567, 1976, 2386, 2752
MhlI GDGCHC 1 cut(s) 936
MlyI GAGTC 4 cut(s) 171, 1653, 2311, 2837
MmeI TCCRAC 2 cut(s) 1477, 2792
Mph1103I ATGCAT 3 cut(s) 1009, 1323, 2946
MroXI GAANNNNTTC 2 cut(s) 542, 2963
MslI CAYNNNNRTG 7 cut(s) 330, 676, 963, 1326, 2042, 2062, 2808
MspA1I CMGCKG 1 cut(s) 631
MspCI CTTAAG 2 cut(s) 443, 1142
MspI CCGG 4 cut(s) 1314, 1781, 2041, 2394
MspR9I CCNGG 5 cut(s) 1164, 1513, 1922, 2041, 2690
Mva1269I GAATGC 3 cut(s) 1323, 1432, 2944
MvaI CCWGG 4 cut(s) 1164, 1513, 1922, 2690
MwoI GCNNNNNNNGC 5 cut(s) 31, 403, 782, 1190, 1199
NciI CCSGG 1 cut(s) 2041
NcoI CCATGG 1 cut(s) 1234
NdeI CATATG 1 cut(s) 2329
NdeII GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
NheI GCTAGC 2 cut(s) 1406, 2410
NlaIV GGNNCC 6 cut(s) 112, 639, 1041, 2200, 2305, 2754
NmuCI GTSAC 1 cut(s) 130
NsiI ATGCAT 3 cut(s) 1009, 1323, 2946
NspI RCATGY 6 cut(s) 352, 962, 1125, 1331, 1798, 2881
OliI CACNNNNGTG 1 cut(s) 2062
PaeI GCATGC 1 cut(s) 1798
PaeR7I CTCGAG 1 cut(s) 2421
PaqCI CACCTGC 1 cut(s) 2689
PciI ACATGT 2 cut(s) 348, 1121
PciSI GCTCTTC 1 cut(s) 2295
PcsI WCGNNNNNNNCGW 1 cut(s) 202
PctI GAATGC 3 cut(s) 1323, 1432, 2944
PdmI GAANNNNTTC 2 cut(s) 542, 2963
PfeI GAWTC 8 cut(s) 293, 463, 668, 2087, 2174, 2213, 2225, 2487
PflMI CCANNNNNTGG 2 cut(s) 59, 2249
PfoI TCCNGGA 1 cut(s) 1162
PinAI ACCGGT 1 cut(s) 1780
PkrI GCNGC 8 cut(s) 630, 763, 1186, 1456, 1804, 1888, 2287, 2800
PleI GAGTC 4 cut(s) 170, 1653, 2311, 2837
PpsI GAGTC 4 cut(s) 170, 1653, 2311, 2837
Ppu21I YACGTR 1 cut(s) 2788
PpuMI RGGWCCY 1 cut(s) 847
PscI ACATGT 2 cut(s) 348, 1121
PshAI GACNNNNGTC 1 cut(s) 1465
PsiI TTATAA 1 cut(s) 1832
Psp5II RGGWCCY 1 cut(s) 847
Psp6I CCWGG 4 cut(s) 1162, 1511, 1920, 2688
PspEI GGTNACC 1 cut(s) 130
PspGI CCWGG 4 cut(s) 1162, 1511, 1920, 2688
PspN4I GGNNCC 6 cut(s) 112, 639, 1041, 2200, 2305, 2754
PspPI GGNCC 7 cut(s) 567, 847, 1586, 1718, 1778, 2350, 2555
PspPPI RGGWCCY 1 cut(s) 847
PspXI VCTCGAGB 1 cut(s) 2421
PstI CTGCAG 3 cut(s) 477, 766, 1459
PstNI CAGNNNCTG 4 cut(s) 631, 2216, 2353, 3023
PsuI RGATCY 4 cut(s) 1567, 1976, 2386, 2752
RsaI GTAC 6 cut(s) 303, 1309, 2644, 2728, 2790, 2876
RsaNI GTAC 6 cut(s) 302, 1308, 2643, 2727, 2789, 2875
RseI CAYNNNNRTG 7 cut(s) 330, 676, 963, 1326, 2042, 2062, 2808
SalI GTCGAC 1 cut(s) 2476
SapI GCTCTTC 1 cut(s) 2295
SatI GCNGC 8 cut(s) 629, 762, 1185, 1455, 1803, 1887, 2286, 2799
Sau3AI GATC 8 cut(s) 73, 1567, 1821, 1929, 1976, 1999, 2386, 2752
Sau96I GGNCC 7 cut(s) 567, 847, 1586, 1718, 1778, 2350, 2555
SchI GAGTC 4 cut(s) 171, 1653, 2311, 2837
ScrFI CCNGG 5 cut(s) 1164, 1513, 1922, 2041, 2690
SduI GDGCHC 1 cut(s) 936
SfcI CTRYAG 4 cut(s) 473, 762, 980, 1455
Sfr274I CTCGAG 1 cut(s) 2421
SinI GGWCC 6 cut(s) 567, 847, 1586, 1718, 1778, 2555
SlaI CTCGAG 1 cut(s) 2421
SmiMI CAYNNNNRTG 7 cut(s) 330, 676, 963, 1326, 2042, 2062, 2808
SmlI CTYRAG 6 cut(s) 443, 452, 1142, 1303, 2421, 2524
SmoI CTYRAG 6 cut(s) 443, 452, 1142, 1303, 2421, 2524
SnaBI TACGTA 1 cut(s) 2788
SphI GCATGC 1 cut(s) 1798
SsiI CCGC 8 cut(s) 570, 604, 629, 856, 1058, 1337, 1650, 2266
StyD4I CCNGG 5 cut(s) 1162, 1511, 1920, 2039, 2688
StyI CCWWGG 4 cut(s) 169, 485, 1234, 2299
TaaI ACNGT 7 cut(s) 260, 721, 1217, 1486, 1962, 2064, 2555
TaqI TCGA 8 cut(s) 146, 954, 1172, 1690, 2273, 2422, 2477, 2841
TaqII GACCGA 1 cut(s) 2545
TatI WGTACW 2 cut(s) 1307, 2874
TauI GCSGC 1 cut(s) 631
TfiI GAWTC 8 cut(s) 293, 463, 668, 2087, 2174, 2213, 2225, 2487
TscAI CASTG 7 cut(s) 604, 1579, 1645, 1965, 2069, 2516, 3138
TseFI GTSAC 1 cut(s) 130
TseI GCWGC 7 cut(s) 761, 1184, 1454, 1802, 1886, 2285, 2798
Tsp45I GTSAC 1 cut(s) 130
TspGWI ACGGA 4 cut(s) 926, 1989, 2247, 2765
TspRI CASTG 7 cut(s) 604, 1579, 1645, 1965, 2069, 2516, 3138
Van91I CCANNNNNTGG 2 cut(s) 59, 2249
Vha464I CTTAAG 2 cut(s) 443, 1142
VpaK11BI GGWCC 6 cut(s) 567, 847, 1586, 1718, 1778, 2555
XagI CCTNNNNNAGG 1 cut(s) 2776
XapI RAATTY 5 cut(s) 241, 659, 828, 1770, 3110
XbaI TCTAGA 1 cut(s) 70
XceI RCATGY 6 cut(s) 352, 962, 1125, 1331, 1798, 2881
XhoI CTCGAG 1 cut(s) 2421
XmiI GTMKAC 1 cut(s) 2477
XmnI GAANNNNTTC 2 cut(s) 542, 2963
ZraI GACGTC 1 cut(s) 2255
Zsp2I ATGCAT 3 cut(s) 1009, 1323, 2946
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.