Methylmalonate-semialdehyde dehydrogenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldedh | PF00171 | 42 - 506 | 6.1e-144 | Aldehyde dehydrogenase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 161 |
| AarI | CACCTGC | 1 cut(s) | 1475 |
| Acc36I | ACCTGC | 2 cut(s) | 1375, 1475 |
| AccB1I | GGYRCC | 1 cut(s) | 1115 |
| AccII | CGCG | 2 cut(s) | 227, 283 |
| AccIII | TCCGGA | 1 cut(s) | 66 |
| AciI | CCGC | 7 cut(s) | 60, 89, 225, 227, 903, 1022, 1457 |
| AclI | AACGTT | 1 cut(s) | 1398 |
| AclWI | GGATC | 1 cut(s) | 617 |
| AcsI | RAATTY | 1 cut(s) | 1171 |
| AcuI | CTGAAG | 1 cut(s) | 219 |
| AdeI | CACNNNGTG | 2 cut(s) | 389, 512 |
| AfaI | GTAC | 2 cut(s) | 433, 639 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 66, 834 |
| AflII | CTTAAG | 1 cut(s) | 299 |
| AflIII | ACRYGT | 3 cut(s) | 281, 486, 817 |
| AgsI | TTSAA | 8 cut(s) | 220, 254, 346, 538, 688, 795, 889, 1468 |
| AjnI | CCWGG | 3 cut(s) | 625, 1118, 1540 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1221, 1253 |
| AluBI | AGCT | 8 cut(s) | 10, 72, 304, 313, 749, 806, 1290, 1349 |
| AluI | AGCT | 8 cut(s) | 10, 72, 304, 313, 749, 806, 1290, 1349 |
| Alw21I | GWGCWC | 1 cut(s) | 74 |
| Alw26I | GTCTC | 1 cut(s) | 318 |
| AlwI | GGATC | 1 cut(s) | 617 |
| Ama87I | CYCGRG | 1 cut(s) | 1153 |
| Aor13HI | TCCGGA | 1 cut(s) | 66 |
| AoxI | GGCC | 2 cut(s) | 339, 1180 |
| ApeKI | GCWGC | 4 cut(s) | 7, 304, 917, 1349 |
| ApoI | RAATTY | 1 cut(s) | 1171 |
| AspS9I | GGNCC | 5 cut(s) | 1049, 1075, 1150, 1181, 1241 |
| AsuC2I | CCSGG | 2 cut(s) | 1154, 1155 |
| AsuHPI | GGTGA | 2 cut(s) | 401, 1492 |
| AsuNHI | GCTAGC | 1 cut(s) | 643 |
| AvaI | CYCGRG | 1 cut(s) | 1153 |
| AvaII | GGWCC | 4 cut(s) | 1049, 1075, 1150, 1241 |
| BanI | GGYRCC | 1 cut(s) | 1115 |
| BanII | GRGCYC | 1 cut(s) | 74 |
| BbsI | GAAGAC | 2 cut(s) | 225, 374 |
| Bbv12I | GWGCWC | 1 cut(s) | 74 |
| BbvI | GCAGC | 4 cut(s) | 19, 291, 904, 1336 |
| BccI | CCATC | 2 cut(s) | 619, 671 |
| BceAI | ACGGC | 2 cut(s) | 102, 1221 |
| BciT130I | CCWGG | 3 cut(s) | 627, 1120, 1542 |
| BcnI | CCSGG | 2 cut(s) | 1154, 1155 |
| BcoDI | GTCTC | 1 cut(s) | 318 |
| BfaI | CTAG | 4 cut(s) | 407, 644, 896, 1274 |
| BfmI | CTRYAG | 3 cut(s) | 305, 354, 918 |
| BfrI | CTTAAG | 1 cut(s) | 299 |
| BfuAI | ACCTGC | 2 cut(s) | 1375, 1475 |
| BisI | GCNGC | 7 cut(s) | 8, 90, 225, 305, 903, 918, 1350 |
| BlsI | GCNGC | 7 cut(s) | 9, 91, 226, 306, 904, 919, 1351 |
| Bme1390I | CCNGG | 5 cut(s) | 627, 1120, 1154, 1155, 1542 |
| Bme18I | GGWCC | 4 cut(s) | 1049, 1075, 1150, 1241 |
| BmeT110I | CYCGRG | 1 cut(s) | 1153 |
| BmgT120I | GGNCC | 5 cut(s) | 1049, 1075, 1150, 1181, 1241 |
| BmiI | GGNNCC | 3 cut(s) | 93, 1117, 1152 |
| BmrFI | CCNGG | 5 cut(s) | 627, 1120, 1154, 1155, 1542 |
| BmsI | GCATC | 6 cut(s) | 370, 809, 856, 868, 1027, 1457 |
| BmtI | GCTAGC | 1 cut(s) | 647 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1047 |
| BpiI | GAAGAC | 2 cut(s) | 225, 374 |
| BpuMI | CCSGG | 2 cut(s) | 1154, 1155 |
| Bsa29I | ATCGAT | 1 cut(s) | 153 |
| BsaJI | CCNNGG | 4 cut(s) | 84, 225, 1045, 1153 |
| BsaWI | WCCGGW | 2 cut(s) | 66, 1077 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 76, 106 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 66, 834 |
| Bse118I | RCCGGY | 1 cut(s) | 776 |
| Bse1I | ACTGG | 4 cut(s) | 870, 1244, 1409, 1441 |
| Bse3DI | GCAATG | 3 cut(s) | 555, 663, 1321 |
| BseAI | TCCGGA | 1 cut(s) | 66 |
| BseBI | CCWGG | 3 cut(s) | 627, 1120, 1542 |
| BseCI | ATCGAT | 1 cut(s) | 153 |
| BseDI | CCNNGG | 4 cut(s) | 84, 225, 1045, 1153 |
| BseGI | GGATG | 2 cut(s) | 385, 570 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 66, 834 |
| BseMI | GCAATG | 3 cut(s) | 555, 663, 1321 |
| BseMII | CTCAG | 2 cut(s) | 955, 1535 |
| BseNI | ACTGG | 4 cut(s) | 870, 1244, 1409, 1441 |
| BseRI | GAGGAG | 1 cut(s) | 227 |
| BseXI | GCAGC | 4 cut(s) | 19, 291, 904, 1336 |
| BseYI | CCCAGC | 2 cut(s) | 521, 1379 |
| BsgI | GTGCAG | 1 cut(s) | 1335 |
| Bsh1236I | CGCG | 2 cut(s) | 227, 283 |
| BshFI | GGCC | 2 cut(s) | 341, 1182 |
| BshNI | GGYRCC | 1 cut(s) | 1115 |
| BshVI | ATCGAT | 1 cut(s) | 153 |
| BsiHKAI | GWGCWC | 1 cut(s) | 74 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1153 |
| BsiSI | CCGG | 5 cut(s) | 67, 545, 777, 1078, 1154 |
| BslFI | GGGAC | 3 cut(s) | 858, 1039, 1136 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 66, 834 |
| BsmAI | GTCTC | 1 cut(s) | 318 |
| BsmFI | GGGAC | 3 cut(s) | 858, 1039, 1136 |
| BsmI | GAATGC | 1 cut(s) | 895 |
| BsnI | GGCC | 2 cut(s) | 341, 1182 |
| BsoBI | CYCGRG | 1 cut(s) | 1153 |
| Bsp1286I | GDGCHC | 1 cut(s) | 74 |
| Bsp13I | TCCGGA | 1 cut(s) | 66 |
| Bsp143I | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| BspACI | CCGC | 7 cut(s) | 60, 89, 225, 227, 903, 1022, 1457 |
| BspANI | GGCC | 2 cut(s) | 341, 1182 |
| BspCNI | CTCAG | 2 cut(s) | 954, 1534 |
| BspDI | ATCGAT | 1 cut(s) | 153 |
| BspEI | TCCGGA | 1 cut(s) | 66 |
| BspFNI | CGCG | 2 cut(s) | 227, 283 |
| BspLI | GGNNCC | 3 cut(s) | 93, 1117, 1152 |
| BspMAI | CTGCAG | 2 cut(s) | 309, 922 |
| BspMI | ACCTGC | 2 cut(s) | 1375, 1475 |
| BspOI | GCTAGC | 1 cut(s) | 647 |
| BspPI | GGATC | 1 cut(s) | 617 |
| BspT107I | GGYRCC | 1 cut(s) | 1115 |
| BspTI | CTTAAG | 1 cut(s) | 299 |
| BsrDI | GCAATG | 3 cut(s) | 555, 663, 1321 |
| BsrFI | RCCGGY | 1 cut(s) | 776 |
| BsrI | ACTGG | 4 cut(s) | 870, 1244, 1409, 1441 |
| BssAI | RCCGGY | 1 cut(s) | 776 |
| BssECI | CCNNGG | 4 cut(s) | 84, 225, 1045, 1153 |
| BssMI | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| BssT1I | CCWWGG | 1 cut(s) | 1045 |
| Bst2UI | CCWGG | 3 cut(s) | 627, 1120, 1542 |
| Bst4CI | ACNGT | 4 cut(s) | 949, 1271, 1301, 1516 |
| Bst6I | CTCTTC | 2 cut(s) | 1224, 1272 |
| BstAFI | CTTAAG | 1 cut(s) | 299 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1454 |
| BstC8I | GCNNGC | 3 cut(s) | 645, 1064, 1068 |
| BstDEI | CTNAG | 2 cut(s) | 941, 1521 |
| BstDSI | CCRYGG | 2 cut(s) | 84, 225 |
| BstF5I | GGATG | 2 cut(s) | 385, 570 |
| BstFNI | CGCG | 2 cut(s) | 227, 283 |
| BstKTI | GATC | 4 cut(s) | 57, 625, 1191, 1509 |
| BstMAI | GTCTC | 1 cut(s) | 318 |
| BstMBI | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 47, 245, 304, 310, 653, 662, 899, 1454 |
| BstNI | CCWGG | 3 cut(s) | 627, 1120, 1542 |
| BstNSI | RCATGY | 1 cut(s) | 425 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1047 |
| BstSCI | CCNGG | 5 cut(s) | 625, 1118, 1152, 1153, 1540 |
| BstSFI | CTRYAG | 3 cut(s) | 305, 354, 918 |
| BstUI | CGCG | 2 cut(s) | 227, 283 |
| BstV1I | GCAGC | 4 cut(s) | 19, 291, 904, 1336 |
| BstV2I | GAAGAC | 2 cut(s) | 225, 374 |
| BstX2I | RGATCY | 1 cut(s) | 622 |
| BstYI | RGATCY | 1 cut(s) | 622 |
| Bsu15I | ATCGAT | 1 cut(s) | 153 |
| BsuRI | GGCC | 2 cut(s) | 341, 1182 |
| BsuTUI | ATCGAT | 1 cut(s) | 153 |
| BtgI | CCRYGG | 2 cut(s) | 84, 225 |
| BtsCI | GGATG | 2 cut(s) | 385, 570 |
| BtsI | GCAGTG | 2 cut(s) | 1532, 1555 |
| BtsIMutI | CAGTG | 2 cut(s) | 1532, 1555 |
| BveI | ACCTGC | 2 cut(s) | 1375, 1475 |
| Cac8I | GCNNGC | 3 cut(s) | 645, 1064, 1068 |
| Cfr10I | RCCGGY | 1 cut(s) | 776 |
| Cfr13I | GGNCC | 5 cut(s) | 1049, 1075, 1150, 1181, 1241 |
| Cfr42I | CCGCGG | 1 cut(s) | 228 |
| Cfr9I | CCCGGG | 1 cut(s) | 1153 |
| ClaI | ATCGAT | 1 cut(s) | 153 |
| CseI | GACGC | 4 cut(s) | 135, 181, 272, 289 |
| Csp6I | GTAC | 2 cut(s) | 432, 638 |
| CviQI | GTAC | 2 cut(s) | 432, 638 |
| DdeI | CTNAG | 2 cut(s) | 941, 1521 |
| DpnI | GATC | 4 cut(s) | 56, 624, 1190, 1508 |
| DpnII | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| DraIII | CACNNNGTG | 2 cut(s) | 389, 512 |
| Eam1104I | CTCTTC | 2 cut(s) | 1224, 1272 |
| EarI | CTCTTC | 2 cut(s) | 1224, 1272 |
| Ecl136II | GAGCTC | 1 cut(s) | 72 |
| Eco130I | CCWWGG | 1 cut(s) | 1045 |
| Eco24I | GRGCYC | 1 cut(s) | 74 |
| Eco32I | GATATC | 1 cut(s) | 742 |
| Eco47I | GGWCC | 4 cut(s) | 1049, 1075, 1150, 1241 |
| Eco53kI | GAGCTC | 1 cut(s) | 72 |
| Eco57I | CTGAAG | 1 cut(s) | 219 |
| Eco88I | CYCGRG | 1 cut(s) | 1153 |
| EcoICRI | GAGCTC | 1 cut(s) | 72 |
| EcoRII | CCWGG | 3 cut(s) | 625, 1118, 1540 |
| EcoRV | GATATC | 1 cut(s) | 742 |
| EcoT14I | CCWWGG | 1 cut(s) | 1045 |
| EcoT38I | GRGCYC | 1 cut(s) | 74 |
| ErhI | CCWWGG | 1 cut(s) | 1045 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 326, 358 |
| FaqI | GGGAC | 3 cut(s) | 858, 1039, 1136 |
| FauI | CCCGC | 2 cut(s) | 1015, 1450 |
| Fnu4HI | GCNGC | 7 cut(s) | 8, 90, 225, 305, 903, 918, 1350 |
| FokI | GGATG | 2 cut(s) | 392, 577 |
| FriOI | GRGCYC | 1 cut(s) | 74 |
| Fsp4HI | GCNGC | 7 cut(s) | 8, 90, 225, 305, 903, 918, 1350 |
| FspBI | CTAG | 4 cut(s) | 407, 644, 896, 1274 |
| GluI | GCNGC | 7 cut(s) | 8, 90, 225, 305, 903, 918, 1350 |
| GsaI | CCCAGC | 2 cut(s) | 525, 1383 |
| HaeIII | GGCC | 2 cut(s) | 341, 1182 |
| HapII | CCGG | 5 cut(s) | 67, 545, 777, 1078, 1154 |
| HgaI | GACGC | 4 cut(s) | 135, 181, 272, 289 |
| HincII | GTYRAC | 2 cut(s) | 1297, 1492 |
| HindII | GTYRAC | 2 cut(s) | 1297, 1492 |
| HindIII | AAGCTT | 1 cut(s) | 1288 |
| HinfI | GANTC | 2 cut(s) | 553, 965 |
| HpaI | GTTAAC | 2 cut(s) | 1297, 1492 |
| HpaII | CCGG | 5 cut(s) | 67, 545, 777, 1078, 1154 |
| HphI | GGTGA | 2 cut(s) | 401, 1492 |
| Hpy166II | GTNNAC | 2 cut(s) | 1297, 1492 |
| Hpy188I | TCNGA | 6 cut(s) | 96, 111, 321, 616, 746, 1365 |
| Hpy188III | TCNNGA | 5 cut(s) | 67, 685, 795, 875, 1274 |
| Hpy8I | GTNNAC | 2 cut(s) | 1297, 1492 |
| Hpy99I | CGWCG | 3 cut(s) | 55, 175, 283 |
| HpyAV | CCTTC | 2 cut(s) | 238, 1525 |
| HpyCH4III | ACNGT | 4 cut(s) | 949, 1271, 1301, 1516 |
| HpyCH4IV | ACGT | 4 cut(s) | 459, 488, 817, 1398 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 47, 245, 304, 310, 653, 662, 899, 1454 |
| HpyF3I | CTNAG | 2 cut(s) | 941, 1521 |
| HpySE526I | ACGT | 4 cut(s) | 459, 488, 817, 1398 |
| Kpn2I | TCCGGA | 1 cut(s) | 66 |
| KspAI | GTTAAC | 2 cut(s) | 1297, 1492 |
| KspI | CCGCGG | 1 cut(s) | 228 |
| Kzo9I | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| LmnI | GCTCC | 3 cut(s) | 69, 97, 310 |
| Lsp1109I | GCAGC | 4 cut(s) | 19, 291, 904, 1336 |
| LweI | GCATC | 6 cut(s) | 370, 809, 856, 868, 1027, 1457 |
| MaeI | CTAG | 4 cut(s) | 407, 644, 896, 1274 |
| MaeII | ACGT | 4 cut(s) | 459, 488, 817, 1398 |
| MaeIII | GTNAC | 5 cut(s) | 274, 1015, 1201, 1301, 1516 |
| MalI | GATC | 4 cut(s) | 56, 624, 1190, 1508 |
| MboI | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| MboII | GAAGA | 5 cut(s) | 225, 379, 1241, 1241, 1289 |
| MfeI | CAATTG | 2 cut(s) | 573, 852 |
| MflI | RGATCY | 1 cut(s) | 622 |
| MhlI | GDGCHC | 1 cut(s) | 74 |
| MluCI | AATT | 8 cut(s) | 15, 130, 480, 573, 852, 1087, 1171, 1371 |
| MluI | ACGCGT | 1 cut(s) | 281 |
| MlyI | GAGTC | 1 cut(s) | 974 |
| MmeI | TCCRAC | 1 cut(s) | 940 |
| MnlI | CCTC | 9 cut(s) | 110, 205, 403, 655, 921, 988, 1255, 1273, 1369 |
| MroI | TCCGGA | 1 cut(s) | 66 |
| MslI | CAYNNNNRTG | 2 cut(s) | 390, 426 |
| MspA1I | CMGCKG | 3 cut(s) | 62, 227, 905 |
| MspCI | CTTAAG | 1 cut(s) | 299 |
| MspI | CCGG | 5 cut(s) | 67, 545, 777, 1078, 1154 |
| MspR9I | CCNGG | 5 cut(s) | 627, 1120, 1154, 1155, 1542 |
| MunI | CAATTG | 2 cut(s) | 573, 852 |
| Mva1269I | GAATGC | 1 cut(s) | 895 |
| MvaI | CCWGG | 3 cut(s) | 627, 1120, 1542 |
| MvnI | CGCG | 2 cut(s) | 227, 283 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 47, 245, 304, 310, 653, 662, 899, 1454 |
| NciI | CCSGG | 2 cut(s) | 1154, 1155 |
| NdeII | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| NheI | GCTAGC | 1 cut(s) | 643 |
| NlaIV | GGNNCC | 3 cut(s) | 93, 1117, 1152 |
| NspI | RCATGY | 1 cut(s) | 425 |
| PaqCI | CACCTGC | 1 cut(s) | 1475 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 92 |
| PctI | GAATGC | 1 cut(s) | 895 |
| PfeI | GAWTC | 1 cut(s) | 553 |
| PflFI | GACNNNGTC | 1 cut(s) | 145 |
| PkrI | GCNGC | 7 cut(s) | 9, 91, 226, 306, 904, 919, 1351 |
| PleI | GAGTC | 1 cut(s) | 973 |
| PpsI | GAGTC | 1 cut(s) | 973 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1047 |
| PsiI | TTATAA | 1 cut(s) | 161 |
| Psp124BI | GAGCTC | 1 cut(s) | 74 |
| Psp1406I | AACGTT | 1 cut(s) | 1398 |
| Psp6I | CCWGG | 3 cut(s) | 625, 1118, 1540 |
| PspFI | CCCAGC | 2 cut(s) | 521, 1379 |
| PspGI | CCWGG | 3 cut(s) | 625, 1118, 1540 |
| PspN4I | GGNNCC | 3 cut(s) | 93, 1117, 1152 |
| PspPI | GGNCC | 5 cut(s) | 1049, 1075, 1150, 1181, 1241 |
| PstI | CTGCAG | 2 cut(s) | 309, 922 |
| PsuI | RGATCY | 1 cut(s) | 622 |
| PsyI | GACNNNGTC | 1 cut(s) | 145 |
| RsaI | GTAC | 2 cut(s) | 433, 639 |
| RsaNI | GTAC | 2 cut(s) | 432, 638 |
| RseI | CAYNNNNRTG | 2 cut(s) | 390, 426 |
| SacI | GAGCTC | 1 cut(s) | 74 |
| SacII | CCGCGG | 1 cut(s) | 228 |
| SatI | GCNGC | 7 cut(s) | 8, 90, 225, 305, 903, 918, 1350 |
| Sau3AI | GATC | 4 cut(s) | 54, 622, 1188, 1506 |
| Sau96I | GGNCC | 5 cut(s) | 1049, 1075, 1150, 1181, 1241 |
| SchI | GAGTC | 1 cut(s) | 974 |
| ScrFI | CCNGG | 5 cut(s) | 627, 1120, 1154, 1155, 1542 |
| SduI | GDGCHC | 1 cut(s) | 74 |
| SfaNI | GCATC | 6 cut(s) | 370, 809, 856, 868, 1027, 1457 |
| SfcI | CTRYAG | 3 cut(s) | 305, 354, 918 |
| Sfr303I | CCGCGG | 1 cut(s) | 228 |
| SgrBI | CCGCGG | 1 cut(s) | 228 |
| SinI | GGWCC | 4 cut(s) | 1049, 1075, 1150, 1241 |
| SmaI | CCCGGG | 1 cut(s) | 1155 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 390, 426 |
| SmlI | CTYRAG | 1 cut(s) | 299 |
| SmoI | CTYRAG | 1 cut(s) | 299 |
| Sse9I | AATT | 8 cut(s) | 15, 130, 480, 573, 852, 1087, 1171, 1371 |
| SsiI | CCGC | 7 cut(s) | 60, 89, 225, 227, 903, 1022, 1457 |
| SspI | AATATT | 2 cut(s) | 349, 691 |
| SspMI | CTAG | 4 cut(s) | 407, 644, 896, 1274 |
| SstI | GAGCTC | 1 cut(s) | 74 |
| StyD4I | CCNGG | 5 cut(s) | 625, 1118, 1152, 1153, 1540 |
| StyI | CCWWGG | 1 cut(s) | 1045 |
| TaaI | ACNGT | 4 cut(s) | 949, 1271, 1301, 1516 |
| TaiI | ACGT | 4 cut(s) | 462, 491, 820, 1401 |
| TaqI | TCGA | 3 cut(s) | 46, 140, 153 |
| TasI | AATT | 8 cut(s) | 15, 130, 480, 573, 852, 1087, 1171, 1371 |
| TatI | WGTACW | 1 cut(s) | 637 |
| TauI | GCSGC | 3 cut(s) | 92, 227, 905 |
| TfiI | GAWTC | 1 cut(s) | 553 |
| TscAI | CASTG | 2 cut(s) | 1532, 1555 |
| TseI | GCWGC | 4 cut(s) | 7, 304, 917, 1349 |
| TspDTI | ATGAA | 3 cut(s) | 686, 744, 1326 |
| TspGWI | ACGGA | 1 cut(s) | 522 |
| TspMI | CCCGGG | 1 cut(s) | 1153 |
| TspRI | CASTG | 2 cut(s) | 1532, 1555 |
| Tth111I | GACNNNGTC | 1 cut(s) | 145 |
| Vha464I | CTTAAG | 1 cut(s) | 299 |
| VpaK11BI | GGWCC | 4 cut(s) | 1049, 1075, 1150, 1241 |
| XapI | RAATTY | 1 cut(s) | 1171 |
| XbaI | TCTAGA | 1 cut(s) | 1273 |
| XceI | RCATGY | 1 cut(s) | 425 |
| XmaI | CCCGGG | 1 cut(s) | 1153 |
| XspI | CTAG | 4 cut(s) | 407, 644, 896, 1274 |