RLG00000017831

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000503
Physical Location & Seq
Forward (+)
21887484 .. 21899976
12493 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000017831

Sequence Viewer

Length: 2961 bp
ATGAATTCAACGCGCCCACAACAAGGATTGAACCCAGATCGTCTGGACGTAAAACCAATGGTGCCTCCAGAGCGCATTTGTGTGTTTTTGTGTTGGGGGTGGAGTTTTGGGTCTCTGGTAGTGCAAGGTTTCACTGACCTAGTGGGATTTTCAATCAGATTCTTCTCCCTGCCATCAATAATGGAAACTGAAAGTCAAATTGAGCTTACTATACAGAACAATATGCTTCCTCCACAAGCTGGAACATTTCAAGATCGTGAAGATCTCATCCAATATTCAACACCAAGGCATTTGTATAACCTCAAAGCAAAGATCCGTCAAGGAACTCTATCAGAGAAAAGTTTCAAGACATGGAGACCTGACAGGTCAGCTTTGGTGAATACAAGTTCTGCTCCGAGTGGGGGATCATTGATGCAAAGTAACCAGCCGTTGAAGGTTCCTAATTTCATTGGAGGAAAATTCATTGATTCACAAGGGTGTTCAATCATTGACGTAGTAAATCCTGCAACACAAGAGATTGTTTCTCATGTTCCTTTAACTACCTATGAAGAGTTCAAAGCTGCAGTTAGTTCAGCCAAGCAAGCTTTTCCTTCATGGAAAAACACACCTATTACTACACGTCAAAGAATCCTGTTTAAGCTTCAGGAGCTCATCCGCAGAGATATTGATAAACTTGCCATGAATATCACCTTAGAGCAGGGTAAGACGTTGAAGGGTGCTGAGAGTGATGTGCTCCGTGGTATAGAGGTGGTCGAACATGCTTGTGGGATGGCAACTCTACAGATGGGTGAGTTTGTTCCTAATGCATCTTATGGTATTGATACATACAGCATTAGGGAACCACTTGGTGTTTGTGCCGGGATCTGCCCCTTCAACTTTCCCTCAATGATTCCATTATGGATGTTCCCAGTTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAAAATCCAGGAGTTTCGATGATACTTGCAGCACTTGCTAAGGAGGCTGGTTTGCCCGACGGTGTGTTAAATATAGTCCATGGCACTCACGACATTGTTAATTATATCTGTGATGATGATGATATAAAGGCTGTTTCACTTGTTGGCTCGAGTACAGCTGGAATGCACATACATGCAAAGGCAGTTGCTAGGGGAAAGCGTGTTCAGTCCAATATAGGAGGAAAAAATCATGCCATCATCATGCCTGATGCTAGCATGGATGCAACCTTGAATGCTCTGGTCACGGCTGGTTTTGGTGCTGCAGGACAGAGGTGCATGGCTCTTAATACAGCTGTTTTTGTTGGAAACTCAATAACATGGGAGCGTGAACTAGTGGAACGTGCCAAAGCCCTGAAAGTTAATGTGGGAACAGATCCCAGTGCAGACGTTGGTCCAGTTATTACCAAAGAGGTGAAGGATTGCATATGCAGATTAGTCCAGAGCAGTGTCGAAAGCGGTGCTAGACTCGTTCTTGATGGGAGAAATGTTATGGTTCGAGGCTATGAGAATGGAAATTTTGTTGGTCCTACCATCTTATGTGATGTTACAACCAATATGGATTGTTTTAAGGAAGAAATTTTTGGACCGGTTCTTCTGTGCATGCAGGCTGCCAGCCTAGAAGAAGCGATCACAATTATAAACAGAAACAGGTGTGTGAATGGAGCTTCCATATTCACAACATCTGGCATTGCTGCAAGGAAGTTCCAGAATGAAGTTGAGGCTGGGCTGGTTGGGATCAATGTTCCTGTTCCGGTTCCATTGCCATTGTCCTCGTTTAACGGATCTAAGGCATCTTTTGGCAGCGATCTGAATATCTCTGGTAGGGCAGGAGTGCAATTTTACACCCAGATCAAAGCGGTTGCACAACAGTGGAAGGATTTACCTAGCTTAGAATCATCATTAGCCTTGCGTCCATCATATGAGACAAATATGACAAGCAGAGGAGTCTCTTCTTCTTTGCCTTCCACATCTGAGAGAGATTCACCTAGCCATAGAATATCAGGAGCCACAAACTCAGAATCTGAGAGTGATTCACCAAGCAAGTTGCCAAGTCGTGGAGCTCCGTTGTCCCTCCCTTCCACATCTGAGGCAGCTCTTCCAACCCAAGGAGCCTCATCTATGTCTCCAACAGCATATAGGGATTTTTCTAGTCAGGGCCTGTCCCTTGTCCTGCCAGCAACATCCGAGAGAGATCTGTCCGGTGTGGATATGTCACTAGCCATGCCTCGAGCAACAGAAAGAGATATACCAAAACAAGGTTTGACATTGACAACTTCACAATCATCAGAGAGAATGTATATGCCTCAAACTTCTCATTGGATGGAAACCTCAAGACCAACATCTCAAAGGACTGAAAATATTTCACCAAGTTCTGAGAGGCATCTTGCCTCAACATCTCAGAGGAATGACAAGAATGGCAACACGTCACTGTCATCTCAAAGGACTGGTACTTCTATGGCATTGACTTCCGAGAGCGTCTATGCCCGTGCCTCTCATGACAATATGGCTCCAATATCACTCCGAAGTGATGGTATGACCGGAACATCTCACAGGACGGATCCCACACTACGTCCAACCTCTGAGAGGGCATACATGCTGGGAGTAACTCATCTGAATGACAATATGGGTCAAACATTTCAAAGGCCCGACACCATGTTTTCAACATCTGAGAGGATGTACATGCCCGCAAAATCTCATCAGCATGACCATATGGGTTCAACATCTCGGAGAACTGATATTCCTATGCATTCAACTTCGGAGCGGATGTTCATGTCCACAGCATCTCAAAGGAATGAGGAGTTGGCTGTTGCTTCTCAACCTGCCTCCGAGAGATTATATTTGTCTCCATTAGTTCCGAGAAGTGCTGGTACGGCTCAGAAGATGTTTCCCCAAAACTCTCTAATTTTGAGTGAGGAGTTTCCCTCCCAAGGAGCATCACTGACTTTACCCACATCTCAGAGGATATAG

Protein Analysis

987

Amino Acids

107.04

Weight (kDa)

7.01

Isoelectric Point (pI)

50.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 154 - 618 6.4e-133 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1631
Acc36I ACCTGC 1 cut(s) 2821
AccB1I GGYRCC 1 cut(s) 61
AccB7I CCANNNNNTGG 2 cut(s) 239, 2048
AccBSI CCGCTC 1 cut(s) 2755
AccII CGCG 1 cut(s) 13
AciI CCGC 5 cut(s) 655, 1449, 1850, 2679, 2755
AclWI GGATC 8 cut(s) 307, 412, 869, 1361, 1736, 1783, 2546, 2559
AcsI RAATTY 4 cut(s) 4, 458, 1507, 1569
AcuI CTGAAG 1 cut(s) 626
AdeI CACNNNGTG 1 cut(s) 848
AfaI GTAC 4 cut(s) 1108, 2443, 2672, 2863
AfiI CCNNNNNNNGG 8 cut(s) 23, 239, 401, 2048, 2099, 2249, 2577, 2921
AflII CTTAAG 1 cut(s) 941
AflIII ACRYGT 3 cut(s) 617, 920, 2415
AgeI ACCGGT 1 cut(s) 1579
AhlI ACTAGT 1 cut(s) 1324
AjiI CACGTC 2 cut(s) 620, 2418
AjnI CCWGG 1 cut(s) 961
AjuI GAANNNNNNNTTGG 4 cut(s) 1557, 1589, 2777, 2809
AleI CACNNNNGTG 2 cut(s) 475, 1861
AloI GAACNNNNNNTCC 6 cut(s) 1140, 1172, 2716, 2744, 2748, 2776
Alw21I GWGCWC 3 cut(s) 651, 735, 2056
Alw26I GTCTC 6 cut(s) 117, 349, 1910, 1945, 2121, 2841
AlwI GGATC 8 cut(s) 307, 412, 869, 1361, 1736, 1783, 2546, 2559
AlwNI CAGNNNCTG 2 cut(s) 2015, 2152
Ama87I CYCGRG 2 cut(s) 1102, 2220
AoxI GGCC 2 cut(s) 2149, 2636
ApeKI GCWGC 7 cut(s) 560, 983, 1253, 1601, 1685, 1794, 2084
ApoI RAATTY 4 cut(s) 4, 458, 1507, 1569
AsiGI ACCGGT 1 cut(s) 1579
Asp700I GAANNNNTTC 1 cut(s) 341
AspLEI GCGC 2 cut(s) 15, 75
AspS9I GGNCC 5 cut(s) 1385, 1517, 1577, 2149, 2637
AsuC2I CCSGG 1 cut(s) 859
AsuHPI GGTGA 7 cut(s) 388, 679, 800, 1417, 1968, 2019, 2349
AsuNHI GCTAGC 1 cut(s) 1205
AvaI CYCGRG 2 cut(s) 1102, 2220
AvaII GGWCC 3 cut(s) 1385, 1517, 1577
BamHI GGATCC 1 cut(s) 2551
BanI GGYRCC 1 cut(s) 61
BanII GRGCYC 2 cut(s) 651, 2056
BarI GAAGNNNNNNTAC 2 cut(s) 2845, 2877
Bbv12I GWGCWC 3 cut(s) 651, 735, 2056
BbvI GCAGC 7 cut(s) 547, 995, 1240, 1588, 1672, 1806, 2096
BccI CCATC 9 cut(s) 181, 763, 778, 1196, 1463, 1532, 1915, 2308, 2516
BceAI ACGGC 3 cut(s) 412, 1254, 2880
BcgI CGANNNNNNTGC 2 cut(s) 1433, 1467
BciT130I CCWGG 1 cut(s) 963
BcnI CCSGG 1 cut(s) 859
BcoDI GTCTC 6 cut(s) 117, 349, 1910, 1945, 2121, 2841
BcuI ACTAGT 1 cut(s) 1324
BfmI CTRYAG 3 cut(s) 561, 779, 1254
BfrI CTTAAG 1 cut(s) 941
BfuAI ACCTGC 1 cut(s) 2821
BglII AGATCT 2 cut(s) 262, 2185
BisI GCNGC 7 cut(s) 561, 984, 1254, 1602, 1686, 1795, 2085
BlsI GCNGC 7 cut(s) 562, 985, 1255, 1603, 1687, 1796, 2086
Bme1390I CCNGG 2 cut(s) 859, 963
Bme18I GGWCC 3 cut(s) 1385, 1517, 1577
BmeT110I CYCGRG 2 cut(s) 1102, 2220
BmgBI CACGTC 2 cut(s) 620, 2418
BmgT120I GGNCC 5 cut(s) 1385, 1517, 1577, 2149, 2637
BmiI GGNNCC 8 cut(s) 63, 438, 840, 1749, 1999, 2104, 2502, 2553
BmrFI CCNGG 2 cut(s) 859, 963
BmrI ACTGGG 2 cut(s) 902, 1365
BmsI GCATC 8 cut(s) 402, 815, 1192, 1204, 1793, 2383, 2783, 2936
BmtI GCTAGC 1 cut(s) 1209
BmuI ACTGGG 2 cut(s) 902, 1365
BoxI GACNNNNGTC 1 cut(s) 1383
BplI GAGNNNNNCTC 2 cut(s) 2900, 2932
BpmI CTGGAG 1 cut(s) 51
Bpu10I CCTNAGC 1 cut(s) 993
BpuEI CTTGAG 1 cut(s) 2308
BpuMI CCSGG 1 cut(s) 859
BsaI GGTCTC 2 cut(s) 117, 349
BsaJI CCNNGG 5 cut(s) 284, 736, 1033, 2098, 2920
BsaWI WCCGGW 4 cut(s) 1579, 1744, 2192, 2531
BsaXI ACNNNNNCTCC 2 cut(s) 2744, 2774
Bsc4I CCNNNNNNNGG 8 cut(s) 23, 239, 401, 2048, 2099, 2249, 2577, 2921
Bse118I RCCGGY 1 cut(s) 1579
Bse1I ACTGG 4 cut(s) 908, 1371, 1388, 2443
Bse3DI GCAATG 2 cut(s) 1680, 1751
BseBI CCWGG 1 cut(s) 963
BseDI CCNNGG 5 cut(s) 284, 736, 1033, 2098, 2920
BseGI GGATG 9 cut(s) 267, 651, 774, 906, 1219, 2174, 2319, 2673, 2763
BseLI CCNNNNNNNGG 8 cut(s) 23, 239, 401, 2048, 2099, 2249, 2577, 2921
BseMI GCAATG 2 cut(s) 1680, 1751
BseNI ACTGG 4 cut(s) 908, 1371, 1388, 2443
BseRI GAGGAG 3 cut(s) 1950, 2804, 2921
BseXI GCAGC 7 cut(s) 547, 995, 1240, 1588, 1672, 1806, 2096
BseYI CCCAGC 2 cut(s) 1715, 2590
BsgI GTGCAG 1 cut(s) 1395
Bsh1236I CGCG 1 cut(s) 13
BshFI GGCC 2 cut(s) 2151, 2638
BshNI GGYRCC 1 cut(s) 61
BshTI ACCGGT 1 cut(s) 1579
BsiHKAI GWGCWC 3 cut(s) 651, 735, 2056
BsiHKCI CYCGRG 2 cut(s) 1102, 2220
BsiSI CCGG 5 cut(s) 858, 1580, 1745, 2193, 2532
BslFI GGGAC 2 cut(s) 2047, 2140
BslI CCNNNNNNNGG 8 cut(s) 23, 239, 401, 2048, 2099, 2249, 2577, 2921
BsmAI GTCTC 6 cut(s) 117, 349, 1910, 1945, 2121, 2841
BsmFI GGGAC 2 cut(s) 2047, 2140
BsmI GAATGC 3 cut(s) 1122, 1231, 2740
BsnI GGCC 2 cut(s) 2151, 2638
Bso31I GGTCTC 2 cut(s) 117, 349
BsoBI CYCGRG 2 cut(s) 1102, 2220
Bsp1286I GDGCHC 3 cut(s) 651, 735, 2056
Bsp1407I TGTACA 1 cut(s) 2670
Bsp19I CCATGG 1 cut(s) 1033
BspACI CCGC 5 cut(s) 655, 1449, 1850, 2679, 2755
BspANI GGCC 2 cut(s) 2151, 2638
BspFNI CGCG 1 cut(s) 13
BspHI TCATGA 1 cut(s) 2488
BspLI GGNNCC 8 cut(s) 63, 438, 840, 1749, 1999, 2104, 2502, 2553
BspMAI CTGCAG 2 cut(s) 565, 1258
BspMI ACCTGC 1 cut(s) 2821
BspOI GCTAGC 1 cut(s) 1209
BspPI GGATC 8 cut(s) 307, 412, 869, 1361, 1736, 1783, 2546, 2559
BspQI GCTCTTC 1 cut(s) 2094
BspT107I GGYRCC 1 cut(s) 61
BspTI CTTAAG 1 cut(s) 941
BspTNI GGTCTC 2 cut(s) 117, 349
BsrBI CCGCTC 1 cut(s) 2755
BsrDI GCAATG 2 cut(s) 1680, 1751
BsrFI RCCGGY 1 cut(s) 1579
BsrGI TGTACA 1 cut(s) 2670
BsrI ACTGG 4 cut(s) 908, 1371, 1388, 2443
BssAI RCCGGY 1 cut(s) 1579
BssECI CCNNGG 5 cut(s) 284, 736, 1033, 2098, 2920
BssT1I CCWWGG 4 cut(s) 284, 1033, 2098, 2920
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 3 cut(s) 1016, 1863, 2424
Bst6I CTCTTC 3 cut(s) 543, 1948, 2094
BstAFI CTTAAG 1 cut(s) 941
BstAPI GCANNNNNTGC 1 cut(s) 989
BstAUI TGTACA 1 cut(s) 2670
BstC8I GCNNGC 7 cut(s) 582, 1207, 1595, 1599, 1606, 2169, 2679
BstDSI CCRYGG 2 cut(s) 736, 1033
BstENI CCTNNNNNAGG 1 cut(s) 2575
BstF5I GGATG 9 cut(s) 267, 651, 774, 906, 1219, 2174, 2319, 2673, 2763
BstFNI CGCG 1 cut(s) 13
BstHHI GCGC 2 cut(s) 15, 75
BstMAI GTCTC 6 cut(s) 117, 349, 1910, 1945, 2121, 2841
BstMWI GCNNNNNNNGC 6 cut(s) 70, 581, 646, 989, 998, 2864
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 6 cut(s) 761, 924, 1130, 1597, 2590, 2677
BstPAI GACNNNNGTC 1 cut(s) 1383
BstSCI CCNGG 2 cut(s) 857, 961
BstSFI CTRYAG 3 cut(s) 561, 779, 1254
BstUI CGCG 1 cut(s) 13
BstV1I GCAGC 7 cut(s) 547, 995, 1240, 1588, 1672, 1806, 2096
BstX2I RGATCY 7 cut(s) 262, 312, 861, 1366, 1775, 2185, 2551
BstYI RGATCY 7 cut(s) 262, 312, 861, 1366, 1775, 2185, 2551
BsuRI GGCC 2 cut(s) 2151, 2638
BtgI CCRYGG 2 cut(s) 736, 1033
BtrI CACGTC 2 cut(s) 620, 2418
BtsCI GGATG 9 cut(s) 267, 651, 774, 906, 1219, 2174, 2319, 2673, 2763
BtsI GCAGTG 1 cut(s) 1444
BtsIMutI CAGTG 6 cut(s) 132, 1378, 1444, 1868, 2420, 2930
BveI ACCTGC 1 cut(s) 2821
Cac8I GCNNGC 7 cut(s) 582, 1207, 1595, 1599, 1606, 2169, 2679
CaiI CAGNNNCTG 2 cut(s) 2015, 2152
CciI TCATGA 1 cut(s) 2488
CfoI GCGC 2 cut(s) 15, 75
Cfr10I RCCGGY 1 cut(s) 1579
Cfr13I GGNCC 5 cut(s) 1385, 1517, 1577, 2149, 2637
CseI GACGC 2 cut(s) 1892, 2458
Csp6I GTAC 4 cut(s) 1107, 2442, 2671, 2862
CspAI ACCGGT 1 cut(s) 1579
CviQI GTAC 4 cut(s) 1107, 2442, 2671, 2862
DraIII CACNNNGTG 1 cut(s) 848
Eam1104I CTCTTC 3 cut(s) 543, 1948, 2094
EarI CTCTTC 3 cut(s) 543, 1948, 2094
Ecl136II GAGCTC 2 cut(s) 649, 2054
Eco130I CCWWGG 4 cut(s) 284, 1033, 2098, 2920
Eco24I GRGCYC 2 cut(s) 651, 2056
Eco31I GGTCTC 2 cut(s) 117, 349
Eco47I GGWCC 3 cut(s) 1385, 1517, 1577
Eco53kI GAGCTC 2 cut(s) 649, 2054
Eco57I CTGAAG 1 cut(s) 626
Eco88I CYCGRG 2 cut(s) 1102, 2220
EcoICRI GAGCTC 2 cut(s) 649, 2054
EcoNI CCTNNNNNAGG 1 cut(s) 2575
EcoO109I RGGNCCY 1 cut(s) 2149
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 961
EcoT14I CCWWGG 4 cut(s) 284, 1033, 2098, 2920
EcoT22I ATGCAT 2 cut(s) 808, 2742
EcoT38I GRGCYC 2 cut(s) 651, 2056
ErhI CCWWGG 4 cut(s) 284, 1033, 2098, 2920
FaqI GGGAC 2 cut(s) 2047, 2140
FauI CCCGC 1 cut(s) 2686
FauNDI CATATG 3 cut(s) 1418, 1912, 2703
Fnu4HI GCNGC 7 cut(s) 561, 984, 1254, 1602, 1686, 1795, 2085
FokI GGATG 9 cut(s) 254, 638, 781, 913, 1226, 2161, 2326, 2680, 2770
FriOI GRGCYC 2 cut(s) 651, 2056
Fsp4HI GCNGC 7 cut(s) 561, 984, 1254, 1602, 1686, 1795, 2085
GlaI GCGC 2 cut(s) 14, 74
GluI GCNGC 7 cut(s) 561, 984, 1254, 1602, 1686, 1795, 2085
GsaI CCCAGC 2 cut(s) 1719, 2594
GsuI CTGGAG 1 cut(s) 51
HaeIII GGCC 2 cut(s) 2151, 2638
HapII CCGG 5 cut(s) 858, 1580, 1745, 2193, 2532
HgaI GACGC 2 cut(s) 1892, 2458
HhaI GCGC 2 cut(s) 15, 75
Hin6I GCGC 2 cut(s) 13, 73
HinP1I GCGC 2 cut(s) 13, 73
HindIII AAGCTT 2 cut(s) 582, 638
HpaII CCGG 5 cut(s) 858, 1580, 1745, 2193, 2532
HphI GGTGA 7 cut(s) 388, 679, 800, 1417, 1968, 2019, 2349
Hpy166II GTNNAC 2 cut(s) 1322, 2769
Hpy8I GTNNAC 2 cut(s) 1322, 2769
Hpy99I CGWCG 1 cut(s) 1016
HpyAV CCTTC 8 cut(s) 427, 600, 706, 880, 1402, 1861, 1965, 2079
HpyCH4III ACNGT 3 cut(s) 1016, 1863, 2424
HpyCH4IV ACGT 8 cut(s) 48, 492, 619, 707, 1333, 1380, 2417, 2563
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 581, 646, 989, 998, 2864
HpySE526I ACGT 8 cut(s) 48, 492, 619, 707, 1333, 1380, 2417, 2563
HspAI GCGC 2 cut(s) 13, 73
LguI GCTCTTC 1 cut(s) 2094
Lsp1109I GCAGC 7 cut(s) 547, 995, 1240, 1588, 1672, 1806, 2096
LweI GCATC 8 cut(s) 402, 815, 1192, 1204, 1793, 2383, 2783, 2936
MaeII ACGT 8 cut(s) 48, 492, 619, 707, 1333, 1380, 2417, 2563
MaeIII GTNAC 7 cut(s) 419, 916, 1234, 1537, 2205, 2418, 2596
MbiI CCGCTC 1 cut(s) 2755
MflI RGATCY 7 cut(s) 262, 312, 861, 1366, 1775, 2185, 2551
MhlI GDGCHC 3 cut(s) 651, 735, 2056
MlyI GAGTC 2 cut(s) 1452, 1947
MmeI TCCRAC 4 cut(s) 1276, 2117, 2144, 2591
Mph1103I ATGCAT 2 cut(s) 808, 2742
MroXI GAANNNNTTC 1 cut(s) 341
MseI TTAA 9 cut(s) 536, 636, 942, 1022, 1053, 1278, 1353, 1560, 1770
MslI CAYNNNNRTG 8 cut(s) 80, 475, 762, 1125, 1193, 1861, 2607, 2694
MspA1I CMGCKG 2 cut(s) 1112, 1286
MspCI CTTAAG 1 cut(s) 941
MspI CCGG 5 cut(s) 858, 1580, 1745, 2193, 2532
MspR9I CCNGG 2 cut(s) 859, 963
Mva1269I GAATGC 3 cut(s) 1122, 1231, 2740
MvaI CCWGG 1 cut(s) 963
MvnI CGCG 1 cut(s) 13
MwoI GCNNNNNNNGC 6 cut(s) 70, 581, 646, 989, 998, 2864
NciI CCSGG 1 cut(s) 859
NcoI CCATGG 1 cut(s) 1033
NdeI CATATG 3 cut(s) 1418, 1912, 2703
NheI GCTAGC 1 cut(s) 1205
NlaIV GGNNCC 8 cut(s) 63, 438, 840, 1749, 1999, 2104, 2502, 2553
NmuCI GTSAC 3 cut(s) 1234, 2205, 2418
NsiI ATGCAT 2 cut(s) 808, 2742
NspI RCATGY 6 cut(s) 761, 924, 1130, 1597, 2590, 2677
OliI CACNNNNGTG 2 cut(s) 475, 1861
PaeI GCATGC 1 cut(s) 1597
PaeR7I CTCGAG 2 cut(s) 1102, 2220
PagI TCATGA 1 cut(s) 2488
PciI ACATGT 1 cut(s) 920
PciSI GCTCTTC 1 cut(s) 2094
PctI GAATGC 3 cut(s) 1122, 1231, 2740
PdmI GAANNNNTTC 1 cut(s) 341
PfeI GAWTC 8 cut(s) 159, 467, 627, 889, 1886, 1973, 2012, 2024
PflMI CCANNNNNTGG 2 cut(s) 239, 2048
PfoI TCCNGGA 1 cut(s) 961
PinAI ACCGGT 1 cut(s) 1579
PkrI GCNGC 7 cut(s) 562, 985, 1255, 1603, 1687, 1796, 2086
PleI GAGTC 2 cut(s) 1452, 1946
PpsI GAGTC 2 cut(s) 1452, 1946
PscI ACATGT 1 cut(s) 920
PshAI GACNNNNGTC 1 cut(s) 1383
PsiI TTATAA 1 cut(s) 1631
Psp124BI GAGCTC 2 cut(s) 651, 2056
Psp6I CCWGG 1 cut(s) 961
PspFI CCCAGC 2 cut(s) 1715, 2590
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 8 cut(s) 63, 438, 840, 1749, 1999, 2104, 2502, 2553
PspPI GGNCC 5 cut(s) 1385, 1517, 1577, 2149, 2637
PspXI VCTCGAGB 2 cut(s) 1102, 2220
PstI CTGCAG 2 cut(s) 565, 1258
PstNI CAGNNNCTG 2 cut(s) 2015, 2152
PsuI RGATCY 7 cut(s) 262, 312, 861, 1366, 1775, 2185, 2551
PvuII CAGCTG 2 cut(s) 1112, 1286
RsaI GTAC 4 cut(s) 1108, 2443, 2672, 2863
RsaNI GTAC 4 cut(s) 1107, 2442, 2671, 2862
RseI CAYNNNNRTG 8 cut(s) 80, 475, 762, 1125, 1193, 1861, 2607, 2694
SacI GAGCTC 2 cut(s) 651, 2056
SapI GCTCTTC 1 cut(s) 2094
SaqAI TTAA 9 cut(s) 536, 636, 942, 1022, 1053, 1278, 1353, 1560, 1770
SatI GCNGC 7 cut(s) 561, 984, 1254, 1602, 1686, 1795, 2085
Sau96I GGNCC 5 cut(s) 1385, 1517, 1577, 2149, 2637
SchI GAGTC 2 cut(s) 1452, 1947
ScrFI CCNGG 2 cut(s) 859, 963
SduI GDGCHC 3 cut(s) 651, 735, 2056
SfaNI GCATC 8 cut(s) 402, 815, 1192, 1204, 1793, 2383, 2783, 2936
SfcI CTRYAG 3 cut(s) 561, 779, 1254
Sfr274I CTCGAG 2 cut(s) 1102, 2220
SinI GGWCC 3 cut(s) 1385, 1517, 1577
SlaI CTCGAG 2 cut(s) 1102, 2220
SmiMI CAYNNNNRTG 8 cut(s) 80, 475, 762, 1125, 1193, 1861, 2607, 2694
SmlI CTYRAG 4 cut(s) 941, 1102, 2220, 2323
SmoI CTYRAG 4 cut(s) 941, 1102, 2220, 2323
SpeI ACTAGT 1 cut(s) 1324
SphI GCATGC 1 cut(s) 1597
SsiI CCGC 5 cut(s) 655, 1449, 1850, 2679, 2755
SspI AATATT 2 cut(s) 275, 2353
SstI GAGCTC 2 cut(s) 651, 2056
StyD4I CCNGG 2 cut(s) 857, 961
StyI CCWWGG 4 cut(s) 284, 1033, 2098, 2920
TaaI ACNGT 3 cut(s) 1016, 1863, 2424
TaiI ACGT 8 cut(s) 51, 495, 622, 710, 1336, 1383, 2420, 2566
TaqI TCGA 6 cut(s) 753, 971, 1103, 1443, 1489, 2221
TatI WGTACW 2 cut(s) 1106, 2670
TfiI GAWTC 8 cut(s) 159, 467, 627, 889, 1886, 1973, 2012, 2024
Tru1I TTAA 9 cut(s) 536, 636, 942, 1022, 1053, 1278, 1353, 1560, 1770
Tru9I TTAA 9 cut(s) 536, 636, 942, 1022, 1053, 1278, 1353, 1560, 1770
TscAI CASTG 6 cut(s) 139, 1378, 1444, 1868, 2427, 2937
TseFI GTSAC 3 cut(s) 1234, 2205, 2418
TseI GCWGC 7 cut(s) 560, 983, 1253, 1601, 1685, 1794, 2084
Tsp45I GTSAC 3 cut(s) 1234, 2205, 2418
TspDTI ATGAA 8 cut(s) 17, 436, 451, 561, 582, 695, 1719, 2752
TspGWI ACGGA 5 cut(s) 305, 725, 1788, 2046, 2564
TspRI CASTG 6 cut(s) 139, 1378, 1444, 1868, 2427, 2937
Van91I CCANNNNNTGG 2 cut(s) 239, 2048
Vha464I CTTAAG 1 cut(s) 941
VpaK11BI GGWCC 3 cut(s) 1385, 1517, 1577
XagI CCTNNNNNAGG 1 cut(s) 2575
XapI RAATTY 4 cut(s) 4, 458, 1507, 1569
XceI RCATGY 6 cut(s) 761, 924, 1130, 1597, 2590, 2677
XhoI CTCGAG 2 cut(s) 1102, 2220
XmnI GAANNNNTTC 1 cut(s) 341
Zsp2I ATGCAT 2 cut(s) 808, 2742
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.