Methylmalonate-semialdehyde dehydrogenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldedh | PF00171 | 50 - 514 | 5.8e-144 | Aldehyde dehydrogenase family |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 185 |
| AarI | CACCTGC | 1 cut(s) | 1499 |
| Acc16I | TGCGCA | 1 cut(s) | 408 |
| Acc36I | ACCTGC | 2 cut(s) | 1399, 1499 |
| AccB1I | GGYRCC | 2 cut(s) | 1139, 1568 |
| AccII | CGCG | 1 cut(s) | 843 |
| AccIII | TCCGGA | 1 cut(s) | 342 |
| AciI | CCGC | 4 cut(s) | 89, 248, 927, 952 |
| AclI | AACGTT | 1 cut(s) | 1422 |
| AclWI | GGATC | 1 cut(s) | 641 |
| AcsI | RAATTY | 2 cut(s) | 1257, 1382 |
| AcuI | CTGAAG | 1 cut(s) | 243 |
| AcyI | GRCGYC | 1 cut(s) | 286 |
| AdeI | CACNNNGTG | 1 cut(s) | 536 |
| AfaI | GTAC | 2 cut(s) | 663, 1022 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 858 |
| AflIII | ACRYGT | 3 cut(s) | 305, 510, 841 |
| AgeI | ACCGGT | 1 cut(s) | 295 |
| AjiI | CACGTC | 1 cut(s) | 308 |
| AjnI | CCWGG | 4 cut(s) | 649, 998, 1177, 1564 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1245, 1277 |
| AleI | CACNNNNGTG | 1 cut(s) | 1549 |
| AluBI | AGCT | 9 cut(s) | 10, 72, 328, 337, 773, 800, 1147, 1232, 1373 |
| AluI | AGCT | 9 cut(s) | 10, 72, 328, 337, 773, 800, 1147, 1232, 1373 |
| AlwI | GGATC | 1 cut(s) | 641 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 92 |
| Aor13HI | TCCGGA | 1 cut(s) | 342 |
| AoxI | GGCC | 1 cut(s) | 1204 |
| ApeKI | GCWGC | 5 cut(s) | 7, 199, 328, 941, 1373 |
| ApoI | RAATTY | 2 cut(s) | 1257, 1382 |
| AsiGI | ACCGGT | 1 cut(s) | 295 |
| AspLEI | GCGC | 3 cut(s) | 409, 1104, 1346 |
| AspS9I | GGNCC | 4 cut(s) | 1073, 1174, 1205, 1265 |
| AsuHPI | GGTGA | 2 cut(s) | 425, 1516 |
| AsuNHI | GCTAGC | 1 cut(s) | 667 |
| AvaII | GGWCC | 3 cut(s) | 1073, 1174, 1265 |
| BanI | GGYRCC | 2 cut(s) | 1139, 1568 |
| BbsI | GAAGAC | 3 cut(s) | 99, 249, 398 |
| BbvI | GCAGC | 5 cut(s) | 19, 211, 315, 928, 1360 |
| BccI | CCATC | 4 cut(s) | 106, 643, 695, 1151 |
| BciT130I | CCWGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| BfaI | CTAG | 5 cut(s) | 431, 668, 920, 1298, 1377 |
| BfmI | CTRYAG | 2 cut(s) | 378, 942 |
| BfoI | RGCGCY | 1 cut(s) | 1347 |
| BfuAI | ACCTGC | 2 cut(s) | 1399, 1499 |
| BisI | GCNGC | 8 cut(s) | 8, 90, 200, 249, 329, 927, 942, 1374 |
| BlpI | GCTNAGC | 1 cut(s) | 93 |
| BlsI | GCNGC | 8 cut(s) | 9, 91, 201, 250, 330, 928, 943, 1375 |
| Bme1390I | CCNGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| Bme18I | GGWCC | 3 cut(s) | 1073, 1174, 1265 |
| BmgBI | CACGTC | 1 cut(s) | 308 |
| BmgT120I | GGNCC | 4 cut(s) | 1073, 1174, 1205, 1265 |
| BmiI | GGNNCC | 5 cut(s) | 727, 1056, 1141, 1176, 1570 |
| BmrFI | CCNGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| BmsI | GCATC | 5 cut(s) | 394, 833, 880, 892, 1481 |
| BmtI | GCTAGC | 1 cut(s) | 671 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1071 |
| BpiI | GAAGAC | 3 cut(s) | 99, 249, 398 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 86, 118 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 93 |
| BpuEI | CTTGAG | 1 cut(s) | 20 |
| BsaAI | YACGTR | 1 cut(s) | 513 |
| BsaHI | GRCGYC | 1 cut(s) | 286 |
| BsaJI | CCNNGG | 4 cut(s) | 999, 1069, 1095, 1177 |
| BsaWI | WCCGGW | 2 cut(s) | 295, 342 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 858 |
| Bse118I | RCCGGY | 2 cut(s) | 295, 1460 |
| Bse1I | ACTGG | 2 cut(s) | 1268, 1433 |
| Bse3DI | GCAATG | 3 cut(s) | 579, 687, 1345 |
| BseAI | TCCGGA | 1 cut(s) | 342 |
| BseBI | CCWGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| BseDI | CCNNGG | 4 cut(s) | 999, 1069, 1095, 1177 |
| BseGI | GGATG | 4 cut(s) | 98, 409, 594, 1162 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 858 |
| BseMI | GCAATG | 3 cut(s) | 579, 687, 1345 |
| BseMII | CTCAG | 2 cut(s) | 84, 979 |
| BseNI | ACTGG | 2 cut(s) | 1268, 1433 |
| BseXI | GCAGC | 5 cut(s) | 19, 211, 315, 928, 1360 |
| BseYI | CCCAGC | 2 cut(s) | 545, 1403 |
| Bsh1236I | CGCG | 1 cut(s) | 843 |
| BshFI | GGCC | 1 cut(s) | 1206 |
| BshNI | GGYRCC | 2 cut(s) | 1139, 1568 |
| BshTI | ACCGGT | 1 cut(s) | 295 |
| BsiSI | CCGG | 4 cut(s) | 296, 343, 569, 1461 |
| BslFI | GGGAC | 1 cut(s) | 1160 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 858 |
| BsmFI | GGGAC | 1 cut(s) | 1160 |
| BsmI | GAATGC | 1 cut(s) | 919 |
| BsnI | GGCC | 1 cut(s) | 1206 |
| Bsp13I | TCCGGA | 1 cut(s) | 342 |
| Bsp143I | GATC | 3 cut(s) | 54, 646, 1530 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 93 |
| BspACI | CCGC | 4 cut(s) | 89, 248, 927, 952 |
| BspANI | GGCC | 1 cut(s) | 1206 |
| BspCNI | CTCAG | 2 cut(s) | 85, 978 |
| BspEI | TCCGGA | 1 cut(s) | 342 |
| BspFNI | CGCG | 1 cut(s) | 843 |
| BspLI | GGNNCC | 5 cut(s) | 727, 1056, 1141, 1176, 1570 |
| BspMAI | CTGCAG | 1 cut(s) | 946 |
| BspMI | ACCTGC | 2 cut(s) | 1399, 1499 |
| BspOI | GCTAGC | 1 cut(s) | 671 |
| BspPI | GGATC | 1 cut(s) | 641 |
| BspT107I | GGYRCC | 2 cut(s) | 1139, 1568 |
| BsrDI | GCAATG | 3 cut(s) | 579, 687, 1345 |
| BsrFI | RCCGGY | 2 cut(s) | 295, 1460 |
| BsrI | ACTGG | 2 cut(s) | 1268, 1433 |
| BssAI | RCCGGY | 2 cut(s) | 295, 1460 |
| BssECI | CCNNGG | 4 cut(s) | 999, 1069, 1095, 1177 |
| BssMI | GATC | 3 cut(s) | 54, 646, 1530 |
| BssNI | GRCGYC | 1 cut(s) | 286 |
| BssT1I | CCWWGG | 2 cut(s) | 1069, 1095 |
| Bst2UI | CCWGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| Bst4CI | ACNGT | 3 cut(s) | 973, 1295, 1540 |
| Bst6I | CTCTTC | 3 cut(s) | 231, 471, 1296 |
| BstACI | GRCGYC | 1 cut(s) | 286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1478 |
| BstBAI | YACGTR | 1 cut(s) | 513 |
| BstC8I | GCNNGC | 5 cut(s) | 669, 802, 806, 1088, 1092 |
| BstDEI | CTNAG | 2 cut(s) | 93, 965 |
| BstF5I | GGATG | 4 cut(s) | 98, 409, 594, 1162 |
| BstFNI | CGCG | 1 cut(s) | 843 |
| BstH2I | RGCGCY | 1 cut(s) | 1347 |
| BstHHI | GCGC | 3 cut(s) | 409, 1104, 1346 |
| BstKTI | GATC | 3 cut(s) | 57, 649, 1533 |
| BstMBI | GATC | 3 cut(s) | 54, 646, 1530 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 47, 269, 334, 677, 686, 923, 1159, 1478 |
| BstNI | CCWGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| BstNSI | RCATGY | 2 cut(s) | 449, 808 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1071 |
| BstSCI | CCNGG | 4 cut(s) | 649, 998, 1177, 1564 |
| BstSFI | CTRYAG | 2 cut(s) | 378, 942 |
| BstUI | CGCG | 1 cut(s) | 843 |
| BstV1I | GCAGC | 5 cut(s) | 19, 211, 315, 928, 1360 |
| BstV2I | GAAGAC | 3 cut(s) | 99, 249, 398 |
| BstX2I | RGATCY | 1 cut(s) | 646 |
| BstYI | RGATCY | 1 cut(s) | 646 |
| BsuRI | GGCC | 1 cut(s) | 1206 |
| BtrI | CACGTC | 1 cut(s) | 308 |
| BtsCI | GGATG | 4 cut(s) | 98, 409, 594, 1162 |
| BtsI | GCAGTG | 2 cut(s) | 258, 1556 |
| BtsIMutI | CAGTG | 3 cut(s) | 258, 1031, 1556 |
| BveI | ACCTGC | 2 cut(s) | 1399, 1499 |
| Cac8I | GCNNGC | 5 cut(s) | 669, 802, 806, 1088, 1092 |
| CaiI | CAGNNNCTG | 1 cut(s) | 92 |
| CfoI | GCGC | 3 cut(s) | 409, 1104, 1346 |
| Cfr10I | RCCGGY | 2 cut(s) | 295, 1460 |
| Cfr13I | GGNCC | 4 cut(s) | 1073, 1174, 1205, 1265 |
| CseI | GACGC | 4 cut(s) | 159, 205, 275, 1070 |
| Csp6I | GTAC | 2 cut(s) | 662, 1021 |
| CspAI | ACCGGT | 1 cut(s) | 295 |
| CviQI | GTAC | 2 cut(s) | 662, 1021 |
| DdeI | CTNAG | 2 cut(s) | 93, 965 |
| DpnI | GATC | 3 cut(s) | 56, 648, 1532 |
| DpnII | GATC | 3 cut(s) | 54, 646, 1530 |
| DraIII | CACNNNGTG | 1 cut(s) | 536 |
| Eam1104I | CTCTTC | 3 cut(s) | 231, 471, 1296 |
| EarI | CTCTTC | 3 cut(s) | 231, 471, 1296 |
| Eco130I | CCWWGG | 2 cut(s) | 1069, 1095 |
| Eco32I | GATATC | 1 cut(s) | 766 |
| Eco47I | GGWCC | 3 cut(s) | 1073, 1174, 1265 |
| Eco57I | CTGAAG | 1 cut(s) | 243 |
| EcoRII | CCWGG | 4 cut(s) | 649, 998, 1177, 1564 |
| EcoRV | GATATC | 1 cut(s) | 766 |
| EcoT14I | CCWWGG | 2 cut(s) | 1069, 1095 |
| ErhI | CCWWGG | 2 cut(s) | 1069, 1095 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 350, 382 |
| FaqI | GGGAC | 1 cut(s) | 1160 |
| FauNDI | CATATG | 1 cut(s) | 1106 |
| Fnu4HI | GCNGC | 8 cut(s) | 8, 90, 200, 249, 329, 927, 942, 1374 |
| FokI | GGATG | 4 cut(s) | 85, 416, 601, 1169 |
| Fsp4HI | GCNGC | 8 cut(s) | 8, 90, 200, 249, 329, 927, 942, 1374 |
| FspAI | RTGCGCAY | 1 cut(s) | 408 |
| FspBI | CTAG | 5 cut(s) | 431, 668, 920, 1298, 1377 |
| FspI | TGCGCA | 1 cut(s) | 408 |
| GlaI | GCGC | 3 cut(s) | 408, 1103, 1345 |
| GluI | GCNGC | 8 cut(s) | 8, 90, 200, 249, 329, 927, 942, 1374 |
| GsaI | CCCAGC | 2 cut(s) | 549, 1407 |
| HaeII | RGCGCY | 1 cut(s) | 1347 |
| HaeIII | GGCC | 1 cut(s) | 1206 |
| HapII | CCGG | 4 cut(s) | 296, 343, 569, 1461 |
| HgaI | GACGC | 4 cut(s) | 159, 205, 275, 1070 |
| HhaI | GCGC | 3 cut(s) | 409, 1104, 1346 |
| Hin1I | GRCGYC | 1 cut(s) | 286 |
| Hin6I | GCGC | 3 cut(s) | 407, 1102, 1344 |
| HinP1I | GCGC | 3 cut(s) | 407, 1102, 1344 |
| HincII | GTYRAC | 3 cut(s) | 225, 1321, 1516 |
| HindII | GTYRAC | 3 cut(s) | 225, 1321, 1516 |
| HinfI | GANTC | 1 cut(s) | 577 |
| HpaI | GTTAAC | 2 cut(s) | 1321, 1516 |
| HpaII | CCGG | 4 cut(s) | 296, 343, 569, 1461 |
| HphI | GGTGA | 2 cut(s) | 425, 1516 |
| Hpy166II | GTNNAC | 5 cut(s) | 225, 721, 1321, 1516, 1562 |
| Hpy188I | TCNGA | 4 cut(s) | 120, 640, 770, 1389 |
| Hpy188III | TCNNGA | 5 cut(s) | 343, 819, 899, 1047, 1298 |
| Hpy8I | GTNNAC | 5 cut(s) | 225, 721, 1321, 1516, 1562 |
| Hpy99I | CGWCG | 2 cut(s) | 55, 199 |
| HpyAV | CCTTC | 1 cut(s) | 262 |
| HpyCH4III | ACNGT | 3 cut(s) | 973, 1295, 1540 |
| HpyCH4IV | ACGT | 4 cut(s) | 307, 395, 512, 1422 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 47, 269, 334, 677, 686, 923, 1159, 1478 |
| HpyF3I | CTNAG | 2 cut(s) | 93, 965 |
| HpySE526I | ACGT | 4 cut(s) | 307, 395, 512, 1422 |
| Hsp92I | GRCGYC | 1 cut(s) | 286 |
| HspAI | GCGC | 3 cut(s) | 407, 1102, 1344 |
| Kpn2I | TCCGGA | 1 cut(s) | 342 |
| KspAI | GTTAAC | 2 cut(s) | 1321, 1516 |
| Kzo9I | GATC | 3 cut(s) | 54, 646, 1530 |
| LmnI | GCTCC | 1 cut(s) | 1099 |
| Lsp1109I | GCAGC | 5 cut(s) | 19, 211, 315, 928, 1360 |
| LweI | GCATC | 5 cut(s) | 394, 833, 880, 892, 1481 |
| MaeI | CTAG | 5 cut(s) | 431, 668, 920, 1298, 1377 |
| MaeII | ACGT | 4 cut(s) | 307, 395, 512, 1422 |
| MaeIII | GTNAC | 4 cut(s) | 287, 298, 1225, 1540 |
| MalI | GATC | 3 cut(s) | 56, 648, 1532 |
| MboI | GATC | 3 cut(s) | 54, 646, 1530 |
| MboII | GAAGA | 8 cut(s) | 99, 248, 249, 403, 458, 1265, 1265, 1313 |
| MfeI | CAATTG | 1 cut(s) | 597 |
| MflI | RGATCY | 1 cut(s) | 646 |
| MluCI | AATT | 9 cut(s) | 15, 135, 154, 504, 597, 747, 1195, 1257, 1382 |
| MluI | ACGCGT | 1 cut(s) | 841 |
| MmeI | TCCRAC | 1 cut(s) | 964 |
| MroI | TCCGGA | 1 cut(s) | 342 |
| MseI | TTAA | 8 cut(s) | 153, 324, 398, 710, 741, 1320, 1515, 1581 |
| MslI | CAYNNNNRTG | 3 cut(s) | 414, 450, 1549 |
| MspA1I | CMGCKG | 5 cut(s) | 89, 800, 929, 952, 1232 |
| MspI | CCGG | 4 cut(s) | 296, 343, 569, 1461 |
| MspR9I | CCNGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| MunI | CAATTG | 1 cut(s) | 597 |
| Mva1269I | GAATGC | 1 cut(s) | 919 |
| MvaI | CCWGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| MvnI | CGCG | 1 cut(s) | 843 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 47, 269, 334, 677, 686, 923, 1159, 1478 |
| NdeI | CATATG | 1 cut(s) | 1106 |
| NdeII | GATC | 3 cut(s) | 54, 646, 1530 |
| NheI | GCTAGC | 1 cut(s) | 667 |
| NlaIV | GGNNCC | 5 cut(s) | 727, 1056, 1141, 1176, 1570 |
| NmuCI | GTSAC | 1 cut(s) | 287 |
| NsbI | TGCGCA | 1 cut(s) | 408 |
| NspI | RCATGY | 2 cut(s) | 449, 808 |
| OliI | CACNNNNGTG | 1 cut(s) | 1549 |
| PaeI | GCATGC | 1 cut(s) | 808 |
| PaqCI | CACCTGC | 1 cut(s) | 1499 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 218 |
| PctI | GAATGC | 1 cut(s) | 919 |
| PfeI | GAWTC | 1 cut(s) | 577 |
| PinAI | ACCGGT | 1 cut(s) | 295 |
| PkrI | GCNGC | 8 cut(s) | 9, 91, 201, 250, 330, 928, 943, 1375 |
| Ppu21I | YACGTR | 1 cut(s) | 513 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1071 |
| PsiI | TTATAA | 1 cut(s) | 185 |
| Psp1406I | AACGTT | 1 cut(s) | 1422 |
| Psp6I | CCWGG | 4 cut(s) | 649, 998, 1177, 1564 |
| PspFI | CCCAGC | 2 cut(s) | 545, 1403 |
| PspGI | CCWGG | 4 cut(s) | 649, 998, 1177, 1564 |
| PspN4I | GGNNCC | 5 cut(s) | 727, 1056, 1141, 1176, 1570 |
| PspPI | GGNCC | 4 cut(s) | 1073, 1174, 1205, 1265 |
| PstI | CTGCAG | 1 cut(s) | 946 |
| PstNI | CAGNNNCTG | 1 cut(s) | 92 |
| PsuI | RGATCY | 1 cut(s) | 646 |
| PvuII | CAGCTG | 2 cut(s) | 800, 1232 |
| RsaI | GTAC | 2 cut(s) | 663, 1022 |
| RsaNI | GTAC | 2 cut(s) | 662, 1021 |
| RseI | CAYNNNNRTG | 3 cut(s) | 414, 450, 1549 |
| SaqAI | TTAA | 8 cut(s) | 153, 324, 398, 710, 741, 1320, 1515, 1581 |
| SatI | GCNGC | 8 cut(s) | 8, 90, 200, 249, 329, 927, 942, 1374 |
| Sau3AI | GATC | 3 cut(s) | 54, 646, 1530 |
| Sau96I | GGNCC | 4 cut(s) | 1073, 1174, 1205, 1265 |
| ScrFI | CCNGG | 4 cut(s) | 651, 1000, 1179, 1566 |
| SfaNI | GCATC | 5 cut(s) | 394, 833, 880, 892, 1481 |
| SfcI | CTRYAG | 2 cut(s) | 378, 942 |
| SinI | GGWCC | 3 cut(s) | 1073, 1174, 1265 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 414, 450, 1549 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| SphI | GCATGC | 1 cut(s) | 808 |
| Sse9I | AATT | 9 cut(s) | 15, 135, 154, 504, 597, 747, 1195, 1257, 1382 |
| SsiI | CCGC | 4 cut(s) | 89, 248, 927, 952 |
| SspI | AATATT | 2 cut(s) | 373, 715 |
| SspMI | CTAG | 5 cut(s) | 431, 668, 920, 1298, 1377 |
| StyD4I | CCNGG | 4 cut(s) | 649, 998, 1177, 1564 |
| StyI | CCWWGG | 2 cut(s) | 1069, 1095 |
| TaaI | ACNGT | 3 cut(s) | 973, 1295, 1540 |
| TaiI | ACGT | 4 cut(s) | 310, 398, 515, 1425 |
| TasI | AATT | 9 cut(s) | 15, 135, 154, 504, 597, 747, 1195, 1257, 1382 |
| TatI | WGTACW | 1 cut(s) | 661 |
| TauI | GCSGC | 3 cut(s) | 92, 251, 929 |
| TfiI | GAWTC | 1 cut(s) | 577 |
| Tru1I | TTAA | 8 cut(s) | 153, 324, 398, 710, 741, 1320, 1515, 1581 |
| Tru9I | TTAA | 8 cut(s) | 153, 324, 398, 710, 741, 1320, 1515, 1581 |
| TscAI | CASTG | 3 cut(s) | 258, 1038, 1556 |
| TseFI | GTSAC | 1 cut(s) | 287 |
| TseI | GCWGC | 5 cut(s) | 7, 199, 328, 941, 1373 |
| Tsp45I | GTSAC | 1 cut(s) | 287 |
| TspDTI | ATGAA | 1 cut(s) | 249 |
| TspGWI | ACGGA | 6 cut(s) | 56, 210, 546, 738, 1038, 1067 |
| TspRI | CASTG | 3 cut(s) | 258, 1038, 1556 |
| VpaK11BI | GGWCC | 3 cut(s) | 1073, 1174, 1265 |
| XapI | RAATTY | 2 cut(s) | 1257, 1382 |
| XbaI | TCTAGA | 1 cut(s) | 1297 |
| XceI | RCATGY | 2 cut(s) | 449, 808 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1150 |
| XspI | CTAG | 5 cut(s) | 431, 668, 920, 1298, 1377 |