RH6CG170500

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000503
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG170500.1

Sequence Viewer

Length: 3105 bp
ATGGATTTTGTGTTTGGGGTTTTGTTGTACGGTCGTTTCTCGCCGCTTTTTGTGTCAGGGTTGTCTCTCATGTTCGGGTTTGGTTTGTTATACCATTACAACTATTTGATTAAATTCCTATGTGACTATAGAGCGAAAGCCAGTGACTTTAGTAATGGGTTTTGCTCAAAATGCGGTTCTCATGAAGTTTGTGCTTCAAAGGCCGTGTCTTGCAAATCTGAACAACTGAAATCATTGGAGAATTTACAGTCATTAAATACAGATGGTTTTCTGTTAACCAAAATTGTCAAGGCAGAAGATGCAATTGAAGGAAAAGATGATAATGAGGGTGACATTGATGATGAGAATGTTTGTTGTAAGGAGAATGAAGTGTTTGATGTTCTGTCATTGAGGAAATTGGTAAAGATTGAGCGCCGGCGGGGGAATGAGGCACGTGCAGAACTCGAGAAGGAAAGGATGGCTGCTGCATCTGCAGCTGAGGAAGCAATGGCCATGATCTTGCGTCTTCAGAACGAGAAGAGTTCTACTGAAATCCAAGCTAGTCATTATCGCCAGATAGCTGAGCAGAAGCAGCAATATGATGAAGCAGTGATTCAGTCCTTGCAGTGGATTATAATGAAACACGAATCTGAGAGGAGTCAATTGGAAGAGCAACTAAGGCTGTGCAGGCAAATGTGCAATGGTCAGTCTGTGGAAGGTGATCCAAGTAAAAACCTGTTCGATTCCACCAACATGGAAGATGATGGCCTCGAAGGTGTCTTTGGTGCACATTTAGAAGTGAGTAGTACAACCAGGTATATGATATTGCAGGGAAGCCCCCCATATAGGGAAAGCAGGGAACTCCATTATTCTCCTAGTGTTGTTGAATGTTTGGCAGGTTTCTTCTTCTTGTTTTATTTTTTGGTTACCGAGAAAACACCAGAACGAAGGTCCAACTATTTCGGTAAACAAGTTTCAGAGCGACACAGGGTCGTAGCCATTTGCCGAAGAACCAAAAGCTCTGGCTTTCCCGGACTTCCGTCACCGTCTATTCTCCCGGTTTTGTCTTCCAGTAATATGAGGATGGACCTTGAGAGTTGCATGGGATTAAATGACCCACGACAAATGCTTCCACCTCCACCTGGATCTTTTGTGGATCGTGACGAACTCATTCAACATGTTGGGGACTTTGCTGTGTCACAGGGTTATGTTGTAACTATCAAGCAGTCTAAGAGGGATAGAGTAGTTATCCTTGGTTGTGACAGAGGAGGTGTTTACCGTAATAGGCAGAAACAGGTTGATGAGTCCTGTAGTGAACAGAACAAAAGGAGAAAAGCAGGATCTCGGCTGACAAATTGTCCTTTTGAAGCTGTGGGGAAAAAGGGTGATGGCTTGTGGGTACTTACTGTAAAAAATGGAACCCACAACCATGAACCCTTGAAGGATATTTCAGAACATCCCTCTGCTCGTCGTTTCAACGAGAGAGAAGTTTTGATGATTAAAGAGATGACAGAATCTGGTTTAAAACCTCGCCAAATTCTAAAGAGATTAAGACAAAGCAATCCAGATCTTTTATCAACTCCGAAGCATGTTTATAATGTTAAAGCAAAGCTTCGCCAAGGAAACACGGGAGTTAGAAACTTCAAGTCTTTGAGTCCACAGAAATCATTGGGAAGGAACGATTACTCTGTGGTCATTGAGCCATCTTGGAGGCAGCGCAAACCCCCGAGAGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATTTGCCTCCATTGATGTTTTAAACCCTGCAACACAGCAAGTTGCTTCTCAAGTACCTTTAACAACAAATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACATGCCTTTCCATTGTGGCGATGTACACCTATTACTACTCGTCAGCGTATTATGTTCAAGTTCCAAGAGCTTATACACAGAGACATTGATAAGATTGCTATGACCATTACAAGTGAACATGGCAAAGCATTGAAGGATGCATATGATGATGTCTCACGTGGGCTAGAGGTGGTCGAACATGCTTGTGGACTTGCAACTCTGCAGATGGGAGATTTTATTTCCAATGTATCAAATGGAATTGATAGCTACAGCATTAGGGAGCCACTTGGTGTTTGTGCTGGGATTTGCCCTTTTGATTTTCCAGCCATGATTCCCTTATGGATGTTCACTACTGCAGTGACATGTGGTAATTCATTTATTCTAAAGCCATCAGAGATGGATCCAGGTGCATCTGTGATGCTTGCAGAGTTGGCAATGGAGGCTGGCTTGCCAAGTGGCGTGTTAAATATTGTTCATGGCACTAATGAAACTTTTGATGCTATTTGTGATGATGATGACATTAAAGCTATCTCATTTGTTGGAACAAAAGCAGCAGGTGCTTACATTTATTCCCGAGCATCGGCTAAGGGGAAACGTATTCAGTCCAATGTTGGAGCGAAAAATCATGCTATTGTCATGCCTGATGCAAGCATGGACGCTACTCTGAATGCTCTAGTTGCTGCTGGCTTTGGTGCTGCAGGGCAAAGCTGCACAGCACTTACAACAGTTGTTTTCATTGGAGGCATACATCTATGGGAAGACAAACTTGTAGAGCGTGCCAAAGCACTCAAGGTTGATGCCGGATCACAAGCAGATGTAGACATTGGTCCAGTGATTAGCAAGCAGGTAAAGGAACAGATATGCAGATTGATTCAAACAGGTGTTGAAAGTGGTGCAAAACTGGTGCTTGATGGTAGAAATATCTTGGTTCCCGGATTTGAGCATGGCAACTTCATTGGTCCCACCATCTTATCCGATGTCACAGCAGAGATGGAGTGTTATAAGGAAGAAATCTTTGGCCCAGTTCTTCTCTGTATGGAGGCTGACAACATTGAAGATGCCATAAACATCGTCAACAAAAATAAATATGGCAATGGAGCTTCTATCTTTACAACGTCTGGTGTGGCTGCAAGAAAATTCCAGACTGAGATTGAAGTGGGCCAGGTTGGCATAAATGTTCCCATCTCAGTTCCATTGCCCTATTCCTTGTTTACAAGCTCCCGGCCATCTTTTGCCGGTGATCTTAATTTTGATGAGATCTTTGAACTGTAG

Protein Analysis

1034

Amino Acids

114.51

Weight (kDa)

6.2

Isoelectric Point (pI)

49.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zein-binding PF04576 129 - 219 3.3e-28 Zein-binding
Aldedh PF00171 579 - 1025 2.6e-127 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 614, 1575, 2835
AarI CACCTGC 1 cut(s) 2378
Acc36I ACCTGC 3 cut(s) 866, 2378, 2668
AccI GTMKAC 1 cut(s) 2652
AciI CCGC 3 cut(s) 44, 174, 418
AclWI GGATC 7 cut(s) 695, 1132, 1143, 1327, 2228, 2241, 2644
AcoI YGGCCR 2 cut(s) 489, 3056
AcsI RAATTY 4 cut(s) 113, 241, 1515, 2969
AcuI CTGAAG 1 cut(s) 491
AcvI CACGTG 2 cut(s) 434, 2012
AdeI CACNNNGTG 1 cut(s) 2123
AfaI GTAC 5 cut(s) 29, 787, 1380, 1806, 1879
AfiI CCNNNNNNNGG 5 cut(s) 606, 825, 826, 1121, 2413
AflIII ACRYGT 2 cut(s) 1156, 2195
AhdI GACNNNNNGTC 2 cut(s) 968, 1335
AjnI CCWGG 4 cut(s) 791, 1120, 2236, 2994
AjuI GAANNNNNNNTTGG 4 cut(s) 744, 776, 2832, 2864
Alw21I GWGCWC 1 cut(s) 769
Alw26I GTCTC 3 cut(s) 69, 1929, 2011
Alw44I GTGCAC 1 cut(s) 765
AlwI GGATC 7 cut(s) 695, 1132, 1143, 1327, 2228, 2241, 2644
AlwNI CAGNNNCTG 1 cut(s) 1496
Ama87I CYCGRG 3 cut(s) 443, 1705, 2406
AoxI GGCC 6 cut(s) 201, 489, 745, 2851, 2992, 3056
ApaLI GTGCAC 1 cut(s) 765
ApoI RAATTY 4 cut(s) 113, 241, 1515, 2969
ArsI GACNNNNNNTTYG 2 cut(s) 191, 223
Asp700I GAANNNNTTC 1 cut(s) 1149
AspLEI GCGC 2 cut(s) 414, 1698
AspS9I GGNCC 6 cut(s) 930, 1066, 2660, 2792, 2852, 2992
AsuC2I CCSGG 4 cut(s) 1011, 1037, 2766, 3055
AsuHPI GGTGA 5 cut(s) 341, 710, 1014, 1376, 3083
AvaI CYCGRG 3 cut(s) 443, 1705, 2406
AvaII GGWCC 4 cut(s) 930, 1066, 2660, 2792
BaeGI GKGCMC 1 cut(s) 769
BalI TGGCCA 1 cut(s) 491
BamHI GGATCC 1 cut(s) 2233
BbrPI CACGTG 2 cut(s) 434, 2012
BbsI GAAGAC 3 cut(s) 497, 1038, 2598
Bbv12I GWGCWC 1 cut(s) 769
BbvCI CCTCAGC 1 cut(s) 477
BceAI ACGGC 1 cut(s) 188
BciT130I CCWGG 4 cut(s) 793, 1122, 2238, 2996
BcnI CCSGG 4 cut(s) 1011, 1037, 2766, 3055
BcoDI GTCTC 3 cut(s) 69, 1929, 2011
BfaI CTAG 4 cut(s) 540, 855, 2018, 2507
BfmI CTRYAG 9 cut(s) 127, 471, 1288, 1836, 2054, 2101, 2187, 2529, 3101
BfoI RGCGCY 1 cut(s) 415
BfuAI ACCTGC 3 cut(s) 866, 2378, 2668
BglI GCCNNNNNGGC 1 cut(s) 3000
BglII AGATCT 2 cut(s) 1546, 3090
BlpI GCTNAGC 1 cut(s) 561
Bme1390I CCNGG 8 cut(s) 793, 1011, 1037, 1122, 2238, 2766, 2996, 3055
Bme18I GGWCC 4 cut(s) 930, 1066, 2660, 2792
BmeRI GACNNNNNGTC 2 cut(s) 968, 1335
BmeT110I CYCGRG 3 cut(s) 443, 1705, 2406
BmgT120I GGNCC 6 cut(s) 930, 1066, 2660, 2792, 2852, 2992
BmiI GGNNCC 5 cut(s) 1399, 2115, 2235, 2763, 2794
BmrFI CCNGG 8 cut(s) 793, 1011, 1037, 1122, 2238, 2766, 2996, 3055
BmrI ACTGGG 1 cut(s) 2849
BmuI ACTGGG 1 cut(s) 2849
BoxI GACNNNNGTC 2 cut(s) 1018, 2658
BpiI GAAGAC 3 cut(s) 497, 1038, 2598
Bpu10I CCTNAGC 2 cut(s) 477, 2418
Bpu1102I GCTNAGC 1 cut(s) 561
BpuEI CTTGAG 3 cut(s) 1091, 1785, 2606
BpuMI CCSGG 4 cut(s) 1011, 1037, 2766, 3055
BsaAI YACGTR 2 cut(s) 434, 2012
BsaJI CCNNGG 2 cut(s) 1231, 1597
Bsc4I CCNNNNNNNGG 5 cut(s) 606, 825, 826, 1121, 2413
Bse118I RCCGGY 2 cut(s) 414, 3068
Bse1I ACTGG 5 cut(s) 141, 1050, 2663, 2739, 2855
Bse3DI GCAATG 5 cut(s) 492, 685, 2274, 2932, 3026
BseBI CCWGG 4 cut(s) 793, 1122, 2238, 2996
BseDI CCNNGG 2 cut(s) 1231, 1597
BseGI GGATG 5 cut(s) 462, 1068, 1435, 1996, 2181
BseLI CCNNNNNNNGG 5 cut(s) 606, 825, 826, 1121, 2413
BseMI GCAATG 5 cut(s) 492, 685, 2274, 2932, 3026
BseMII CTCAG 5 cut(s) 468, 552, 621, 2970, 3033
BseNI ACTGG 5 cut(s) 141, 1050, 2663, 2739, 2855
BseRI GAGGAG 3 cut(s) 649, 1260, 1838
BseSI GKGCMC 1 cut(s) 769
BseYI CCCAGC 1 cut(s) 2132
BsgI GTGCAG 3 cut(s) 456, 685, 2527
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 6 cut(s) 203, 491, 747, 2853, 2994, 3058
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 1 cut(s) 769
BsiHKCI CYCGRG 3 cut(s) 443, 1705, 2406
BsiSI CCGG 7 cut(s) 415, 1011, 1037, 2634, 2766, 3055, 3069
BslFI GGGAC 2 cut(s) 1178, 2778
BslI CCNNNNNNNGG 5 cut(s) 606, 825, 826, 1121, 2413
BsmAI GTCTC 3 cut(s) 69, 1929, 2011
BsmFI GGGAC 2 cut(s) 1178, 2778
BsmI GAATGC 1 cut(s) 2506
BsnI GGCC 6 cut(s) 203, 491, 747, 2853, 2994, 3058
BsoBI CYCGRG 3 cut(s) 443, 1705, 2406
Bsp1286I GDGCHC 1 cut(s) 769
Bsp1407I TGTACA 1 cut(s) 1877
Bsp1720I GCTNAGC 1 cut(s) 561
BspACI CCGC 3 cut(s) 44, 174, 418
BspANI GGCC 6 cut(s) 203, 491, 747, 2853, 2994, 3058
BspCNI CTCAG 5 cut(s) 469, 553, 622, 2971, 3032
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 5 cut(s) 1399, 2115, 2235, 2763, 2794
BspMAI CTGCAG 5 cut(s) 475, 1840, 2058, 2191, 2533
BspMI ACCTGC 3 cut(s) 866, 2378, 2668
BspPI GGATC 7 cut(s) 695, 1132, 1143, 1327, 2228, 2241, 2644
BspQI GCTCTTC 1 cut(s) 642
BsrDI GCAATG 5 cut(s) 492, 685, 2274, 2932, 3026
BsrFI RCCGGY 2 cut(s) 414, 3068
BsrGI TGTACA 1 cut(s) 1877
BsrI ACTGG 5 cut(s) 141, 1050, 2663, 2739, 2855
BssAI RCCGGY 2 cut(s) 414, 3068
BssECI CCNNGG 2 cut(s) 1231, 1597
BssT1I CCWWGG 2 cut(s) 1231, 1597
Bst2UI CCWGG 4 cut(s) 793, 1122, 2238, 2996
Bst4CI ACNGT 8 cut(s) 32, 249, 1026, 1259, 1387, 1749, 2560, 3102
Bst6I CTCTTC 2 cut(s) 512, 642
BstAPI GCANNNNNTGC 3 cut(s) 299, 1856, 2390
BstAUI TGTACA 1 cut(s) 1877
BstBAI YACGTR 2 cut(s) 434, 2012
BstC8I GCNNGC 9 cut(s) 416, 668, 2256, 2278, 2282, 2482, 2518, 2610, 2675
BstDEI CTNAG 8 cut(s) 477, 561, 630, 656, 1209, 2418, 2979, 3019
BstEII GGTNACC 1 cut(s) 904
BstF5I GGATG 5 cut(s) 462, 1068, 1435, 1996, 2181
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 2 cut(s) 414, 1698
BstMAI GTCTC 3 cut(s) 69, 1929, 2011
BstMCI CGRYCG 1 cut(s) 34
BstNI CCWGG 4 cut(s) 793, 1122, 2238, 2996
BstNSI RCATGY 5 cut(s) 1160, 1571, 1859, 2036, 2199
BstPAI GACNNNNGTC 2 cut(s) 1018, 2658
BstPI GGTNACC 1 cut(s) 904
BstSCI CCNGG 8 cut(s) 791, 1009, 1035, 1120, 2236, 2764, 2994, 3053
BstSFI CTRYAG 9 cut(s) 127, 471, 1288, 1836, 2054, 2101, 2187, 2529, 3101
BstSLI GKGCMC 1 cut(s) 769
BstV2I GAAGAC 3 cut(s) 497, 1038, 2598
BstX2I RGATCY 5 cut(s) 1124, 1319, 1546, 2233, 3090
BstXI CCANNNNNNTGG 1 cut(s) 733
BstYI RGATCY 5 cut(s) 1124, 1319, 1546, 2233, 3090
BsuRI GGCC 6 cut(s) 203, 491, 747, 2853, 2994, 3058
BtgZI GCGATG 1 cut(s) 1888
BtsCI GGATG 5 cut(s) 462, 1068, 1435, 1996, 2181
BtsI GCAGTG 3 cut(s) 594, 611, 2196
BtsIMutI CAGTG 5 cut(s) 148, 594, 611, 2196, 2670
BveI ACCTGC 3 cut(s) 866, 2378, 2668
Cac8I GCNNGC 9 cut(s) 416, 668, 2256, 2278, 2282, 2482, 2518, 2610, 2675
CaiI CAGNNNCTG 1 cut(s) 1496
CciI TCATGA 1 cut(s) 181
CfoI GCGC 2 cut(s) 414, 1698
Cfr10I RCCGGY 2 cut(s) 414, 3068
Cfr13I GGNCC 6 cut(s) 930, 1066, 2660, 2792, 2852, 2992
CseI GACGC 2 cut(s) 491, 2498
CsiI ACCWGGT 1 cut(s) 791
Csp6I GTAC 5 cut(s) 28, 786, 1379, 1805, 1878
CviQI GTAC 5 cut(s) 28, 786, 1379, 1805, 1878
DdeI CTNAG 8 cut(s) 477, 561, 630, 656, 1209, 2418, 2979, 3019
DraI TTTAAA 2 cut(s) 1503, 1773
DraIII CACNNNGTG 1 cut(s) 2123
DriI GACNNNNNGTC 2 cut(s) 968, 1335
EaeI YGGCCR 2 cut(s) 489, 3056
Eam1104I CTCTTC 2 cut(s) 512, 642
Eam1105I GACNNNNNGTC 2 cut(s) 968, 1335
EarI CTCTTC 2 cut(s) 512, 642
Eco130I CCWWGG 2 cut(s) 1231, 1597
Eco47I GGWCC 4 cut(s) 930, 1066, 2660, 2792
Eco57I CTGAAG 1 cut(s) 491
Eco72I CACGTG 2 cut(s) 434, 2012
Eco88I CYCGRG 3 cut(s) 443, 1705, 2406
Eco91I GGTNACC 1 cut(s) 904
EcoO65I GGTNACC 1 cut(s) 904
EcoRII CCWGG 4 cut(s) 791, 1120, 2236, 2994
EcoT14I CCWWGG 2 cut(s) 1231, 1597
EcoT22I ATGCAT 1 cut(s) 1996
ErhI CCWWGG 2 cut(s) 1231, 1597
FalI AAGNNNNNCTT 4 cut(s) 1575, 1607, 2583, 2615
FaqI GGGAC 2 cut(s) 1178, 2778
FauI CCCGC 1 cut(s) 411
FauNDI CATATG 1 cut(s) 1996
FblI GTMKAC 1 cut(s) 2652
FokI GGATG 5 cut(s) 469, 1075, 1422, 2003, 2188
FspBI CTAG 4 cut(s) 540, 855, 2018, 2507
GlaI GCGC 2 cut(s) 413, 1697
GsaI CCCAGC 1 cut(s) 2136
HaeII RGCGCY 1 cut(s) 415
HaeIII GGCC 6 cut(s) 203, 491, 747, 2853, 2994, 3058
HapII CCGG 7 cut(s) 415, 1011, 1037, 2634, 2766, 3055, 3069
HgaI GACGC 2 cut(s) 491, 2498
HhaI GCGC 2 cut(s) 414, 1698
Hin6I GCGC 2 cut(s) 412, 1696
HinP1I GCGC 2 cut(s) 412, 1696
HincII GTYRAC 2 cut(s) 276, 2908
HindII GTYRAC 2 cut(s) 276, 2908
HindIII AAGCTT 1 cut(s) 1589
HpaI GTTAAC 1 cut(s) 276
HpaII CCGG 7 cut(s) 415, 1011, 1037, 2634, 2766, 3055, 3069
HphI GGTGA 5 cut(s) 341, 710, 1014, 1376, 3083
Hpy188I TCNGA 9 cut(s) 220, 510, 631, 958, 1432, 1563, 2227, 2499, 2809
Hpy188III TCNNGA 6 cut(s) 182, 445, 1139, 1544, 2406, 2974
Hpy99I CGWCG 1 cut(s) 1452
HpyAV CCTTC 8 cut(s) 302, 442, 689, 746, 921, 1414, 1647, 1981
HpyCH4III ACNGT 8 cut(s) 32, 249, 1026, 1259, 1387, 1749, 2560, 3102
HpyCH4IV ACGT 4 cut(s) 433, 2011, 2428, 2948
HpyF3I CTNAG 8 cut(s) 477, 561, 630, 656, 1209, 2418, 2979, 3019
HpySE526I ACGT 4 cut(s) 433, 2011, 2428, 2948
HspAI GCGC 2 cut(s) 412, 1696
KroI GCCGGC 1 cut(s) 414
KroNI GCCGGC 1 cut(s) 416
KspAI GTTAAC 1 cut(s) 276
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 4 cut(s) 2113, 2447, 2930, 3056
MabI ACCWGGT 1 cut(s) 791
MaeI CTAG 4 cut(s) 540, 855, 2018, 2507
MaeII ACGT 4 cut(s) 433, 2011, 2428, 2948
MfeI CAATTG 2 cut(s) 303, 641
MflI RGATCY 5 cut(s) 1124, 1319, 1546, 2233, 3090
MhlI GDGCHC 1 cut(s) 769
MlsI TGGCCA 1 cut(s) 491
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 3 cut(s) 646, 1292, 1642
MmeI TCCRAC 3 cut(s) 957, 2353, 2425
Mox20I TGGCCA 1 cut(s) 491
Mph1103I ATGCAT 1 cut(s) 1996
MreI CGCCGGCG 1 cut(s) 414
MroNI GCCGGC 1 cut(s) 414
MroXI GAANNNNTTC 1 cut(s) 1149
MscI TGGCCA 1 cut(s) 491
MslI CAYNNNNRTG 3 cut(s) 731, 1407, 2037
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 7 cut(s) 415, 1011, 1037, 2634, 2766, 3055, 3069
MspR9I CCNGG 8 cut(s) 793, 1011, 1037, 1122, 2238, 2766, 2996, 3055
MunI CAATTG 2 cut(s) 303, 641
Mva1269I GAATGC 1 cut(s) 2506
MvaI CCWGG 4 cut(s) 793, 1122, 2238, 2996
NaeI GCCGGC 1 cut(s) 416
NciI CCSGG 4 cut(s) 1011, 1037, 2766, 3055
NdeI CATATG 1 cut(s) 1996
NgoMIV GCCGGC 1 cut(s) 414
NlaIV GGNNCC 5 cut(s) 1399, 2115, 2235, 2763, 2794
NmeAIII GCCGAG 1 cut(s) 1303
NmuCI GTSAC 9 cut(s) 122, 143, 329, 1020, 1139, 1176, 1238, 2191, 2812
NsiI ATGCAT 1 cut(s) 1996
NspI RCATGY 5 cut(s) 1160, 1571, 1859, 2036, 2199
PaeR7I CTCGAG 1 cut(s) 443
PagI TCATGA 1 cut(s) 181
PaqCI CACCTGC 1 cut(s) 2378
PciI ACATGT 2 cut(s) 1156, 2195
PciSI GCTCTTC 1 cut(s) 642
PctI GAATGC 1 cut(s) 2506
PdiI GCCGGC 1 cut(s) 416
PdmI GAANNNNTTC 1 cut(s) 1149
PfeI GAWTC 7 cut(s) 592, 626, 722, 1493, 1742, 2164, 2704
PfoI TCCNGGA 2 cut(s) 1009, 2764
PleI GAGTC 3 cut(s) 645, 1291, 1641
PmaCI CACGTG 2 cut(s) 434, 2012
PmlI CACGTG 2 cut(s) 434, 2012
PpsI GAGTC 3 cut(s) 645, 1291, 1641
Ppu21I YACGTR 2 cut(s) 434, 2012
PscI ACATGT 2 cut(s) 1156, 2195
PshAI GACNNNNGTC 2 cut(s) 1018, 2658
PsiI TTATAA 3 cut(s) 614, 1575, 2835
Psp6I CCWGG 4 cut(s) 791, 1120, 2236, 2994
PspCI CACGTG 2 cut(s) 434, 2012
PspEI GGTNACC 1 cut(s) 904
PspFI CCCAGC 1 cut(s) 2132
PspGI CCWGG 4 cut(s) 791, 1120, 2236, 2994
PspN4I GGNNCC 5 cut(s) 1399, 2115, 2235, 2763, 2794
PspPI GGNCC 6 cut(s) 930, 1066, 2660, 2792, 2852, 2992
PstI CTGCAG 5 cut(s) 475, 1840, 2058, 2191, 2533
PstNI CAGNNNCTG 1 cut(s) 1496
PsuI RGATCY 5 cut(s) 1124, 1319, 1546, 2233, 3090
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 5 cut(s) 29, 787, 1380, 1806, 1879
RsaNI GTAC 5 cut(s) 28, 786, 1379, 1805, 1878
RseI CAYNNNNRTG 3 cut(s) 731, 1407, 2037
SapI GCTCTTC 1 cut(s) 642
Sau96I GGNCC 6 cut(s) 930, 1066, 2660, 2792, 2852, 2992
SchI GAGTC 3 cut(s) 646, 1292, 1642
ScrFI CCNGG 8 cut(s) 793, 1011, 1037, 1122, 2238, 2766, 2996, 3055
SduI GDGCHC 1 cut(s) 769
SexAI ACCWGGT 1 cut(s) 791
SfcI CTRYAG 9 cut(s) 127, 471, 1288, 1836, 2054, 2101, 2187, 2529, 3101
Sfr274I CTCGAG 1 cut(s) 443
SgrAI CRCCGGYG 1 cut(s) 414
SinI GGWCC 4 cut(s) 930, 1066, 2660, 2792
SlaI CTCGAG 1 cut(s) 443
SmiMI CAYNNNNRTG 3 cut(s) 731, 1407, 2037
SmlI CTYRAG 4 cut(s) 443, 1070, 1800, 2621
SmoI CTYRAG 4 cut(s) 443, 1070, 1800, 2621
SsiI CCGC 3 cut(s) 44, 174, 418
SspI AATATT 1 cut(s) 2302
SspMI CTAG 4 cut(s) 540, 855, 2018, 2507
StyD4I CCNGG 8 cut(s) 791, 1009, 1035, 1120, 2236, 2764, 2994, 3053
StyI CCWWGG 2 cut(s) 1231, 1597
TaaI ACNGT 8 cut(s) 32, 249, 1026, 1259, 1387, 1749, 2560, 3102
TaiI ACGT 4 cut(s) 436, 2014, 2431, 2951
TaqI TCGA 4 cut(s) 444, 720, 750, 2028
TatI WGTACW 2 cut(s) 785, 1877
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 7 cut(s) 592, 626, 722, 1493, 1742, 2164, 2704
TscAI CASTG 5 cut(s) 148, 594, 611, 2196, 2670
TseFI GTSAC 9 cut(s) 122, 143, 329, 1020, 1139, 1176, 1238, 2191, 2812
Tsp45I GTSAC 9 cut(s) 122, 143, 329, 1020, 1139, 1176, 1238, 2191, 2812
TspGWI ACGGA 1 cut(s) 1008
TspRI CASTG 5 cut(s) 148, 594, 611, 2196, 2670
VneI GTGCAC 1 cut(s) 765
VpaK11BI GGWCC 4 cut(s) 930, 1066, 2660, 2792
XapI RAATTY 4 cut(s) 113, 241, 1515, 2969
XceI RCATGY 5 cut(s) 1160, 1571, 1859, 2036, 2199
XhoI CTCGAG 1 cut(s) 443
XmiI GTMKAC 1 cut(s) 2652
XmnI GAANNNNTTC 1 cut(s) 1149
XspI CTAG 4 cut(s) 540, 855, 2018, 2507
Zsp2I ATGCAT 1 cut(s) 1996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.