RchiOBHm_Chr6g0270041

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000503
Physical Location & Seq
Forward (+)
27705966 .. 27718666
12701 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ24225

Sequence Viewer

Length: 2388 bp
ATGTCAAATGCCCAATGGTTATTGGTTGATGCTTCATTTTCAGTTTGGCAGGTTAATCTGAGAACCTCTTCTTCTTCTTTTTTTTATTTTTTTTATTTTTTGGTTACCGAGAAAACACCAGAACGAAGGTCCAACTATTTCGGTAAACAAGTTTTAGAGCGACACAGAGTCGTAGCCATTTGCCGAAGAACCAAAAGGTCTGGCTTTCCCGGACTTCCGTCACCGTCTATTCTCCCGGTTTTGTCTTCCAGTAATATGAGGATGGACCTTGAGAGTTGCATGGGATTAAATGACCCACGACAGATGCTTCCACCTCCACCTGGATCTTTTGTGGATCGTGACGAACTCATTCAACATGTTGGGGACTTTGCTGTGTCACAGGGTTATGTTGTAACTATCAAGCAGTCTAAGAGGGATAGAGTAGTTATCCTTGGTTGTGACAGAGGAGGTGTTTACCGTAATAGGCAGAAACAGGTTGATGAGTCCTGTAGTGAACAGAACAAAAGGAGAAAAGCAGGATCTCGGCTGACAAATTGTCCTTTTGAAGCTGTGGGGAAAAAGGGTGATGGCTTGTGGGTACTTACTGTCAAAAATGGAACCCACAACCATGAACCCTTGAAGGATATTTCAGAACATCCCTCTGCTCGTCGTTTCAACGAGAGAGAAGTTTTGATGATTAAAGAGATGACAGAATCTGGTTTAAAACCTCGCCAAATTCTAAAGAGATTAAGACAAAGCAATCCAGATCTTTTGTCAACTCCGAAGCATGTTTATAATGTTAAAGCAAAGCTTCGCCAAGGAAACACGGGAGTTAGAAACTTCAAGTCTTTGAGTCCACAGAAATCATTGGGAAGGAACGATTACTCTGTGGTCATCGAGCCATCTTGGAGGCAGCGCAACCCCCCGAGAGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATATGCCTCCATTGATGTTTTAAACCCTGCAACACAGCAAGTTGCTTCTCAAGTACCTTTAACAACAAATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGTGCCTTTCCATTGTGGCGATGTACACCTATTACTACTCGTCAGCGTATTATGTTCAAGTTCCAAGAGCTTATACGCAGAGACATTGATAAGATTGCTATGACCATTACAAGTGAACATGGCAAAGCATTGAAGGATGCATATGATGATGTCTCACATGGGCTAGAGGTGGTCGAACATGCTTGTGGACTTGCAACTCTGCAGATGGGAGATTTTATTTCCAATGTATCAAATGGAATTGATAGCTACAGCATTAGGGAGCCACTTGGTGTTTGTGCTGGGATTTGCCCTTTTGATTTTCCAGCCATGATTCCCTTATGGATGTTCACTACTGCAGTGACATGTGGTAATTCATTTATTCTAAAGCCATCAGAGATGGATCCAGGTGCATCTGTGATGCTTGCAGAGTTGGCAATGGAGGCTGGCTTGCCAAGTGGCGTGTTAAATATTGTTCATGGCACTAATGAAACTTTTGATGCGATTTGTGATGATGATGACATTAAAGCTATCTCATTTGTTGGAACAAAAGCAGCAGGTGCTTACATTTATTCCCGAGCATCGGCTAAGGGGAAACGTATTCAGTCCAATGTTGGAGTGAAAAATCATGCTATTGTCATGCCTGATGCAAGCATGGACGCTACTCTGAATGCTCTAGTTGCTGCTGGCTTTGGTGCTGCAGGACAAAGGTGCACAGCACTTACAACAGTTGTTTTTGTTGGAGGCATACATCTATGGGAAGACAAACTTGTAGAGCGTGCCAAAGCACTCAAGGTTGATGCCGGATCACAAGCAGATGTAGACATTGGTCCAGTGATTAGCAAGCAGGTAAAGGAACAGATATGCAGATTGATTCAAACAGGTGTTGAAAGTGGTGCAAAACTGGTGCTTGATGGTAGAAATATCTTGGTTCCCGGATTTGAGCATGGCAACTTCATTGGTCCCTCCATCTTATCCGATGTCACAGCAGAGATGGAGTGTTATAAGGAAGAAATCTTTGGCCCAGTTCTTCTCTGTATGGAGGTTGACAACATTGAAGATGCCATAAACATCGTCAACAAAAATAAATATGGCAATGGAGCTTCTATCTTTACAAAGTCTGGTCTGGCTGCAAGAAAATTCCAGACTGAGATTGAAGTGGGCCAGGTTGGCATAAATGTTCCCATCTCAGTTCCATTGCCCTATTCCTTGTTTACGAGCTCCCGGCCATCTTTTGCCGGTGATCTTAATTTTGATGGCAAAGCAGGGATTCAGTTTTACACCCAGATGAAGACTGTGACTCAACAATGGAAGGATTTACCTGACAGTGATGGACAAGCCTTGCTAATGTCAACTTGA

Protein Analysis

795

Amino Acids

87.65

Weight (kDa)

8.77

Isoelectric Point (pI)

47.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 312 - 776 2.8e-131 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 774, 2034
AarI CACCTGC 1 cut(s) 1577
Acc36I ACCTGC 3 cut(s) 40, 1577, 1867
AccI GTMKAC 1 cut(s) 1851
AclWI GGATC 6 cut(s) 331, 342, 526, 1427, 1440, 1843
AcoI YGGCCR 1 cut(s) 2255
AcsI RAATTY 2 cut(s) 714, 2168
AdeI CACNNNGTG 1 cut(s) 1322
AfaI GTAC 3 cut(s) 579, 1005, 1078
AfiI CCNNNNNNNGG 2 cut(s) 320, 1612
AflIII ACRYGT 2 cut(s) 355, 1394
AhdI GACNNNNNGTC 2 cut(s) 167, 534
AjnI CCWGG 3 cut(s) 319, 1435, 2193
AjuI GAANNNNNNNTTGG 2 cut(s) 2031, 2063
AluBI AGCT 8 cut(s) 548, 790, 1034, 1123, 1299, 1559, 2132, 2250
AluI AGCT 8 cut(s) 548, 790, 1034, 1123, 1299, 1559, 2132, 2250
Alw21I GWGCWC 2 cut(s) 1745, 2252
Alw26I GTCTC 2 cut(s) 1128, 1210
Alw44I GTGCAC 1 cut(s) 1741
AlwI GGATC 6 cut(s) 331, 342, 526, 1427, 1440, 1843
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 2 cut(s) 904, 1605
AoxI GGCC 3 cut(s) 2050, 2191, 2255
ApaLI GTGCAC 1 cut(s) 1741
ApeKI GCWGC 6 cut(s) 892, 1034, 1583, 1712, 1727, 2159
ApoI RAATTY 2 cut(s) 714, 2168
Asp700I GAANNNNTTC 2 cut(s) 67, 348
AspLEI GCGC 1 cut(s) 897
AspS9I GGNCC 6 cut(s) 129, 265, 1859, 1991, 2051, 2191
AsuC2I CCSGG 4 cut(s) 210, 236, 1965, 2254
AsuHPI GGTGA 3 cut(s) 213, 575, 2282
AvaI CYCGRG 2 cut(s) 904, 1605
AvaII GGWCC 4 cut(s) 129, 265, 1859, 1991
BaeGI GKGCMC 1 cut(s) 1745
BamHI GGATCC 1 cut(s) 1432
BanII GRGCYC 1 cut(s) 2252
BbsI GAAGAC 3 cut(s) 237, 1797, 2327
Bbv12I GWGCWC 2 cut(s) 1745, 2252
BbvI GCAGC 6 cut(s) 904, 1021, 1595, 1699, 1714, 2146
BciT130I CCWGG 3 cut(s) 321, 1437, 2195
BcnI CCSGG 4 cut(s) 210, 236, 1965, 2254
BcoDI GTCTC 2 cut(s) 1128, 1210
BfaI CTAG 2 cut(s) 1217, 1706
BfmI CTRYAG 6 cut(s) 487, 1035, 1253, 1300, 1386, 1728
BfuAI ACCTGC 3 cut(s) 40, 1577, 1867
BglI GCCNNNNNGGC 1 cut(s) 2199
BglII AGATCT 1 cut(s) 745
BisI GCNGC 6 cut(s) 893, 1035, 1584, 1713, 1728, 2160
BlsI GCNGC 6 cut(s) 894, 1036, 1585, 1714, 1729, 2161
Bme1390I CCNGG 7 cut(s) 210, 236, 321, 1437, 1965, 2195, 2254
Bme18I GGWCC 4 cut(s) 129, 265, 1859, 1991
BmeRI GACNNNNNGTC 2 cut(s) 167, 534
BmeT110I CYCGRG 2 cut(s) 904, 1605
BmgT120I GGNCC 6 cut(s) 129, 265, 1859, 1991, 2051, 2191
BmiI GGNNCC 5 cut(s) 598, 1314, 1434, 1962, 1993
BmrFI CCNGG 7 cut(s) 210, 236, 321, 1437, 1965, 2195, 2254
BmrI ACTGGG 1 cut(s) 2048
BmuI ACTGGG 1 cut(s) 2048
BoxI GACNNNNGTC 2 cut(s) 217, 1857
BpiI GAAGAC 3 cut(s) 237, 1797, 2327
Bpu10I CCTNAGC 1 cut(s) 1617
BpuEI CTTGAG 3 cut(s) 290, 984, 1805
BpuMI CCSGG 4 cut(s) 210, 236, 1965, 2254
BsaJI CCNNGG 2 cut(s) 430, 796
Bsc4I CCNNNNNNNGG 2 cut(s) 320, 1612
Bse118I RCCGGY 1 cut(s) 2267
Bse1I ACTGG 4 cut(s) 249, 1862, 1938, 2054
Bse3DI GCAATG 3 cut(s) 1473, 2131, 2225
BseBI CCWGG 3 cut(s) 321, 1437, 2195
BseDI CCNNGG 2 cut(s) 430, 796
BseGI GGATG 4 cut(s) 267, 634, 1195, 1380
BseLI CCNNNNNNNGG 2 cut(s) 320, 1612
BseMI GCAATG 3 cut(s) 1473, 2131, 2225
BseMII CTCAG 3 cut(s) 50, 2169, 2232
BseNI ACTGG 4 cut(s) 249, 1862, 1938, 2054
BseRI GAGGAG 2 cut(s) 459, 1037
BseSI GKGCMC 1 cut(s) 1745
BseXI GCAGC 6 cut(s) 904, 1021, 1595, 1699, 1714, 2146
BseYI CCCAGC 1 cut(s) 1331
BshFI GGCC 3 cut(s) 2052, 2193, 2257
BsiHKAI GWGCWC 2 cut(s) 1745, 2252
BsiHKCI CYCGRG 2 cut(s) 904, 1605
BsiSI CCGG 6 cut(s) 210, 236, 1833, 1965, 2254, 2268
BslFI GGGAC 2 cut(s) 377, 1977
BslI CCNNNNNNNGG 2 cut(s) 320, 1612
BsmAI GTCTC 2 cut(s) 1128, 1210
BsmFI GGGAC 2 cut(s) 377, 1977
BsmI GAATGC 1 cut(s) 1705
BsnI GGCC 3 cut(s) 2052, 2193, 2257
BsoBI CYCGRG 2 cut(s) 904, 1605
Bsp1286I GDGCHC 2 cut(s) 1745, 2252
Bsp1407I TGTACA 1 cut(s) 1076
Bsp143I GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
BspANI GGCC 3 cut(s) 2052, 2193, 2257
BspCNI CTCAG 3 cut(s) 51, 2170, 2231
BspLI GGNNCC 5 cut(s) 598, 1314, 1434, 1962, 1993
BspMAI CTGCAG 4 cut(s) 1039, 1257, 1390, 1732
BspMI ACCTGC 3 cut(s) 40, 1577, 1867
BspPI GGATC 6 cut(s) 331, 342, 526, 1427, 1440, 1843
BsrDI GCAATG 3 cut(s) 1473, 2131, 2225
BsrFI RCCGGY 1 cut(s) 2267
BsrGI TGTACA 1 cut(s) 1076
BsrI ACTGG 4 cut(s) 249, 1862, 1938, 2054
BssAI RCCGGY 1 cut(s) 2267
BssECI CCNNGG 2 cut(s) 430, 796
BssMI GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
BssT1I CCWWGG 2 cut(s) 430, 796
Bst2UI CCWGG 3 cut(s) 321, 1437, 2195
Bst4CI ACNGT 7 cut(s) 225, 458, 586, 948, 1759, 2326, 2357
Bst6I CTCTTC 1 cut(s) 73
BstAPI GCANNNNNTGC 2 cut(s) 1055, 1589
BstAUI TGTACA 1 cut(s) 1076
BstC8I GCNNGC 7 cut(s) 1455, 1477, 1481, 1681, 1717, 1809, 1874
BstDEI CTNAG 5 cut(s) 59, 408, 1617, 2178, 2218
BstEII GGTNACC 1 cut(s) 103
BstF5I GGATG 4 cut(s) 267, 634, 1195, 1380
BstHHI GCGC 1 cut(s) 897
BstKTI GATC 7 cut(s) 326, 337, 521, 748, 1435, 1838, 2275
BstMAI GTCTC 2 cut(s) 1128, 1210
BstMBI GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
BstMWI GCNNNNNNNGC 6 cut(s) 1055, 1463, 1472, 1589, 1709, 2199
BstNI CCWGG 3 cut(s) 321, 1437, 2195
BstNSI RCATGY 4 cut(s) 359, 770, 1235, 1398
BstPAI GACNNNNGTC 2 cut(s) 217, 1857
BstPI GGTNACC 1 cut(s) 103
BstSCI CCNGG 7 cut(s) 208, 234, 319, 1435, 1963, 2193, 2252
BstSFI CTRYAG 6 cut(s) 487, 1035, 1253, 1300, 1386, 1728
BstSLI GKGCMC 1 cut(s) 1745
BstV1I GCAGC 6 cut(s) 904, 1021, 1595, 1699, 1714, 2146
BstV2I GAAGAC 3 cut(s) 237, 1797, 2327
BstX2I RGATCY 4 cut(s) 323, 518, 745, 1432
BstYI RGATCY 4 cut(s) 323, 518, 745, 1432
BsuRI GGCC 3 cut(s) 2052, 2193, 2257
BtgZI GCGATG 1 cut(s) 1087
BtsCI GGATG 4 cut(s) 267, 634, 1195, 1380
BtsI GCAGTG 1 cut(s) 1395
BtsIMutI CAGTG 3 cut(s) 1395, 1869, 2362
BveI ACCTGC 3 cut(s) 40, 1577, 1867
Cac8I GCNNGC 7 cut(s) 1455, 1477, 1481, 1681, 1717, 1809, 1874
CaiI CAGNNNCTG 1 cut(s) 695
CfoI GCGC 1 cut(s) 897
Cfr10I RCCGGY 1 cut(s) 2267
Cfr13I GGNCC 6 cut(s) 129, 265, 1859, 1991, 2051, 2191
CseI GACGC 1 cut(s) 1697
Csp6I GTAC 3 cut(s) 578, 1004, 1077
CviQI GTAC 3 cut(s) 578, 1004, 1077
DdeI CTNAG 5 cut(s) 59, 408, 1617, 2178, 2218
DpnI GATC 7 cut(s) 325, 336, 520, 747, 1434, 1837, 2274
DpnII GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
DraI TTTAAA 2 cut(s) 702, 972
DraIII CACNNNGTG 1 cut(s) 1322
DriI GACNNNNNGTC 2 cut(s) 167, 534
EaeI YGGCCR 1 cut(s) 2255
Eam1104I CTCTTC 1 cut(s) 73
Eam1105I GACNNNNNGTC 2 cut(s) 167, 534
EarI CTCTTC 1 cut(s) 73
Ecl136II GAGCTC 1 cut(s) 2250
Eco130I CCWWGG 2 cut(s) 430, 796
Eco24I GRGCYC 1 cut(s) 2252
Eco47I GGWCC 4 cut(s) 129, 265, 1859, 1991
Eco53kI GAGCTC 1 cut(s) 2250
Eco88I CYCGRG 2 cut(s) 904, 1605
Eco91I GGTNACC 1 cut(s) 103
EcoICRI GAGCTC 1 cut(s) 2250
EcoO65I GGTNACC 1 cut(s) 103
EcoRII CCWGG 3 cut(s) 319, 1435, 2193
EcoT14I CCWWGG 2 cut(s) 430, 796
EcoT22I ATGCAT 1 cut(s) 1195
EcoT38I GRGCYC 1 cut(s) 2252
ErhI CCWWGG 2 cut(s) 430, 796
FalI AAGNNNNNCTT 4 cut(s) 774, 806, 1782, 1814
FaqI GGGAC 2 cut(s) 377, 1977
FauNDI CATATG 2 cut(s) 952, 1195
FblI GTMKAC 1 cut(s) 1851
Fnu4HI GCNGC 6 cut(s) 893, 1035, 1584, 1713, 1728, 2160
FokI GGATG 4 cut(s) 274, 621, 1202, 1387
FriOI GRGCYC 1 cut(s) 2252
Fsp4HI GCNGC 6 cut(s) 893, 1035, 1584, 1713, 1728, 2160
FspBI CTAG 2 cut(s) 1217, 1706
GlaI GCGC 1 cut(s) 896
GluI GCNGC 6 cut(s) 893, 1035, 1584, 1713, 1728, 2160
GsaI CCCAGC 1 cut(s) 1335
HaeIII GGCC 3 cut(s) 2052, 2193, 2257
HapII CCGG 6 cut(s) 210, 236, 1833, 1965, 2254, 2268
HgaI GACGC 1 cut(s) 1697
HhaI GCGC 1 cut(s) 897
Hin6I GCGC 1 cut(s) 895
HinP1I GCGC 1 cut(s) 895
HincII GTYRAC 4 cut(s) 756, 2077, 2107, 2382
HindII GTYRAC 4 cut(s) 756, 2077, 2107, 2382
HindIII AAGCTT 1 cut(s) 788
HinfI GANTC 9 cut(s) 168, 482, 692, 832, 941, 1363, 1903, 2299, 2329
HpaII CCGG 6 cut(s) 210, 236, 1833, 1965, 2254, 2268
HphI GGTGA 3 cut(s) 213, 575, 2282
Hpy188I TCNGA 6 cut(s) 60, 631, 762, 1426, 1698, 2008
Hpy188III TCNNGA 4 cut(s) 338, 743, 1605, 2173
Hpy99I CGWCG 1 cut(s) 651
HpyAV CCTTC 5 cut(s) 120, 613, 846, 1180, 2335
HpyCH4III ACNGT 7 cut(s) 225, 458, 586, 948, 1759, 2326, 2357
HpyCH4IV ACGT 2 cut(s) 1054, 1627
HpyF10VI GCNNNNNNNGC 6 cut(s) 1055, 1463, 1472, 1589, 1709, 2199
HpyF3I CTNAG 5 cut(s) 59, 408, 1617, 2178, 2218
HpySE526I ACGT 2 cut(s) 1054, 1627
HspAI GCGC 1 cut(s) 895
Kzo9I GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
LmnI GCTCC 3 cut(s) 1312, 2129, 2255
Lsp1109I GCAGC 6 cut(s) 904, 1021, 1595, 1699, 1714, 2146
MaeI CTAG 2 cut(s) 1217, 1706
MaeII ACGT 2 cut(s) 1054, 1627
MaeIII GTNAC 9 cut(s) 103, 219, 338, 375, 391, 437, 1390, 2011, 2326
MalI GATC 7 cut(s) 325, 336, 520, 747, 1434, 1837, 2274
MboI GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
MflI RGATCY 4 cut(s) 323, 518, 745, 1432
MhlI GDGCHC 2 cut(s) 1745, 2252
MluCI AATT 6 cut(s) 532, 714, 1290, 1402, 2168, 2278
MlyI GAGTC 4 cut(s) 177, 491, 841, 2323
MmeI TCCRAC 4 cut(s) 156, 1552, 1624, 1750
Mph1103I ATGCAT 1 cut(s) 1195
MroXI GAANNNNTTC 2 cut(s) 67, 348
MslI CAYNNNNRTG 3 cut(s) 606, 1236, 2315
MspI CCGG 6 cut(s) 210, 236, 1833, 1965, 2254, 2268
MspR9I CCNGG 7 cut(s) 210, 236, 321, 1437, 1965, 2195, 2254
Mva1269I GAATGC 1 cut(s) 1705
MvaI CCWGG 3 cut(s) 321, 1437, 2195
MwoI GCNNNNNNNGC 6 cut(s) 1055, 1463, 1472, 1589, 1709, 2199
NciI CCSGG 4 cut(s) 210, 236, 1965, 2254
NdeI CATATG 2 cut(s) 952, 1195
NdeII GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
NlaIV GGNNCC 5 cut(s) 598, 1314, 1434, 1962, 1993
NmeAIII GCCGAG 1 cut(s) 502
NmuCI GTSAC 7 cut(s) 219, 338, 375, 437, 1390, 2011, 2326
NsiI ATGCAT 1 cut(s) 1195
NspI RCATGY 4 cut(s) 359, 770, 1235, 1398
PaqCI CACCTGC 1 cut(s) 1577
PciI ACATGT 2 cut(s) 355, 1394
PctI GAATGC 1 cut(s) 1705
PdmI GAANNNNTTC 2 cut(s) 67, 348
PfeI GAWTC 5 cut(s) 692, 941, 1363, 1903, 2299
PfoI TCCNGGA 2 cut(s) 208, 1963
PkrI GCNGC 6 cut(s) 894, 1036, 1585, 1714, 1729, 2161
PleI GAGTC 4 cut(s) 176, 490, 840, 2323
PpsI GAGTC 4 cut(s) 176, 490, 840, 2323
PscI ACATGT 2 cut(s) 355, 1394
PshAI GACNNNNGTC 2 cut(s) 217, 1857
PsiI TTATAA 2 cut(s) 774, 2034
Psp124BI GAGCTC 1 cut(s) 2252
Psp6I CCWGG 3 cut(s) 319, 1435, 2193
PspEI GGTNACC 1 cut(s) 103
PspFI CCCAGC 1 cut(s) 1331
PspGI CCWGG 3 cut(s) 319, 1435, 2193
PspN4I GGNNCC 5 cut(s) 598, 1314, 1434, 1962, 1993
PspPI GGNCC 6 cut(s) 129, 265, 1859, 1991, 2051, 2191
PstI CTGCAG 4 cut(s) 1039, 1257, 1390, 1732
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 4 cut(s) 323, 518, 745, 1432
RsaI GTAC 3 cut(s) 579, 1005, 1078
RsaNI GTAC 3 cut(s) 578, 1004, 1077
RseI CAYNNNNRTG 3 cut(s) 606, 1236, 2315
SacI GAGCTC 1 cut(s) 2252
SatI GCNGC 6 cut(s) 893, 1035, 1584, 1713, 1728, 2160
Sau3AI GATC 7 cut(s) 323, 334, 518, 745, 1432, 1835, 2272
Sau96I GGNCC 6 cut(s) 129, 265, 1859, 1991, 2051, 2191
SchI GAGTC 4 cut(s) 177, 491, 841, 2323
ScrFI CCNGG 7 cut(s) 210, 236, 321, 1437, 1965, 2195, 2254
SduI GDGCHC 2 cut(s) 1745, 2252
SfcI CTRYAG 6 cut(s) 487, 1035, 1253, 1300, 1386, 1728
SinI GGWCC 4 cut(s) 129, 265, 1859, 1991
SmiMI CAYNNNNRTG 3 cut(s) 606, 1236, 2315
SmlI CTYRAG 3 cut(s) 269, 999, 1820
SmoI CTYRAG 3 cut(s) 269, 999, 1820
Sse9I AATT 6 cut(s) 532, 714, 1290, 1402, 2168, 2278
SspI AATATT 1 cut(s) 1501
SspMI CTAG 2 cut(s) 1217, 1706
SstI GAGCTC 1 cut(s) 2252
StyD4I CCNGG 7 cut(s) 208, 234, 319, 1435, 1963, 2193, 2252
StyI CCWWGG 2 cut(s) 430, 796
TaaI ACNGT 7 cut(s) 225, 458, 586, 948, 1759, 2326, 2357
TaiI ACGT 2 cut(s) 1057, 1630
TaqI TCGA 2 cut(s) 876, 1227
TasI AATT 6 cut(s) 532, 714, 1290, 1402, 2168, 2278
TatI WGTACW 1 cut(s) 1076
TfiI GAWTC 5 cut(s) 692, 941, 1363, 1903, 2299
TscAI CASTG 3 cut(s) 1395, 1869, 2362
TseFI GTSAC 7 cut(s) 219, 338, 375, 437, 1390, 2011, 2326
TseI GCWGC 6 cut(s) 892, 1034, 1583, 1712, 1727, 2159
Tsp45I GTSAC 7 cut(s) 219, 338, 375, 437, 1390, 2011, 2326
TspDTI ATGAA 7 cut(s) 24, 624, 1395, 1496, 1533, 1975, 2333
TspGWI ACGGA 1 cut(s) 207
TspRI CASTG 3 cut(s) 1395, 1869, 2362
VneI GTGCAC 1 cut(s) 1741
VpaK11BI GGWCC 4 cut(s) 129, 265, 1859, 1991
XapI RAATTY 2 cut(s) 714, 2168
XceI RCATGY 4 cut(s) 359, 770, 1235, 1398
XmiI GTMKAC 1 cut(s) 1851
XmnI GAANNNNTTC 2 cut(s) 67, 348
XspI CTAG 2 cut(s) 1217, 1706
Zsp2I ATGCAT 1 cut(s) 1195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.