Rorug06G0052800

Methylmalonate-semialdehyde dehydrogenase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000503
Physical Location & Seq
Reverse (-)
7388600 .. 7390627
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0052800.1

Sequence Viewer

Length: 2028 bp
ATGGCCGATCCCCAAGAAATCATCCCTGTTGACTTTCAAGATGACATCAATCTTGACCTGCTTGACCTAGCTGAGCTTGATGAATTCCCCCTTCAACTCATAGGGTATGTTATCTCTGATAAACACCTTAATGTAGCTGCTGTTATCCGAGTTCTCCAACAAGCCTGGCAGAACCTTGGTTGGTTTCATCTGGAACCAATTCAGGCCTACCGTATCTACTCTATCACAGTGGAGGATGAAGAAGCAGGACAGCGTCTTATGGATCTTGGTCCATGGTCCGTTATGGGGTGTAGCTTCAGCATCCACAAATGGCCTCTTGAAAGCAGGCTCTGTGACTTACCCCTACATCTGCTGTCTGTGTGGGTGCAAGTTCATGGCCTTCCAAGAAGTCAAATGACCTTCCAAAATGCTCATATCATTGGCGCTGCAATTGGTATCATTGAGACCGCTGAAGATCCTCATAATCCAGAAGGTTGGAGGGGTTTCTTAAGAATCAGAGTGCAAGTTGATTCACGAGAACCTCTTGTCTCGGGATTCGGCTTCCGCCGATCATCTGGACCACGGATGCGTGCTCAAATCAGATATGAAAGACTTTCAGATTTCTGTCACAACTGTGGCCGACTCGGTCATGCTACCCGCTATTGCACTCATGCAGCCAACTTATGTCGTCAAAAGGATGGTTCTCAGGTCTATAAATTCGGGAAGTGGATGCAGGCCTCGGTCCCTAGAAGATTCTTGCCTCCCCTCCTTGGCCCTGTTAATGCTCCAGACCATCCCAACAACAATGCTGATCACCAGATGGCTGCTGAACCACCTATCCATGTTGACCCCTTGTCATACAGCCCCCCAGAAGACCTCTCTGTCATACCTCAACAGGTTCTTTGCTCTTCCCATGATGACGAGGATCTGCCTTCCCCTCCATCACACCTCCCCTCTTCTCCCCAACCCTTGGGGCGAAGGAATGGAGCACTGATCATCCGAGAACCTGCTGATAGCCCTAACCTTGAAGAAGATGACGTTATGGCTGACTCATATTTGGACCAGCATAACTCTCTTCACATTACCCAAGTCGGCCCAAGAGACAAAGGAAAGACTAAAATGTTTGACGAACAGATGGAGGCTATCCTGTCAGCCAATCCATTTCTCAGGCCTACTATGCCTCCACCCTCCCCTGATGCTATGCTGGATTATCAATCTTCATTTGTTTTGGCCCAATCTCCTAATTTGCTCATAGGCTCCTCATCTGAGGAAAACTCTGACCCATACAGGCCTTCCCCGACCCAAACTGACCTCCCAATGGCCCATAACTTTGATATTACTCTTCCATCTTATCATCCCATTCTCACCCCGACAAACATAAATTCTCTACACCTACCCTATCAACCAGATCACTATCCCCACCAAATCGAATCTCCGTCCCCAGAACCCATACTCAGTCTCCCTTTCCCAATTACTGACCTTCCAAATACCACCTTCGAATCACCCCCCTCTGATCCTAACCCCCTCCCAACACCATCTGATGACACTACCATCACTCTCATATCCTCCTCATTTCATCATCTCAATCTCAAGCGGTGGGGGTCAGATGTGGAAGAAGTTCCTTCCCCGAAACGTCCCTGTATTACCCTATCAGCTGATATTAAGGATGAACCACTCCCCACTCGGGGACGAGGTCGTGGTCGTGGTCGTGGTGCAGGTAAAAACTCTTGTGGCAACTCTCGAAGTCCGGCAAACCGAGGTAGGGGCCGGGGCCGAGGCCGTGGAAGAGCTGCAAGAGGAAGAGGTTGCTCTGGTAAACATACCCAATCTGAAATCACTCTCGAACAAGCCACTCAATTCCAGAGCACAATCATTCAAGGAGAGACTCTTTTTGAGGTTCAAATCCAGGTAGCAGAACAAGTTCAAATCTTTTGTCAGGAACTCCCTATTCCTCCCCCTATTCCCACAGACCGGTTTGATGAATTGTCGGATTCGGATACTGTTAATGGCCGTGGTGGCTGGCCTGGGGCAGCCACAGACCACCCATGA

Protein Analysis

675

Amino Acids

75.03

Weight (kDa)

5.41

Isoelectric Point (pI)

59.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-CCHC_4 PF14392 169 - 216 3e-10 Zinc knuckle
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 860
Acc36I ACCTGC 3 cut(s) 66, 994, 1685
AccB7I CCANNNNNTGG 1 cut(s) 949
AciI CCGC 4 cut(s) 447, 544, 637, 1573
AclWI GGATC 5 cut(s) 2, 270, 449, 912, 1487
AcoI YGGCCR 3 cut(s) 3, 616, 1987
AcsI RAATTY 3 cut(s) 83, 695, 1360
AcuI CTGAAG 2 cut(s) 280, 471
AfiI CCNNNNNNNGG 8 cut(s) 285, 749, 949, 1297, 1663, 1664, 1741, 1950
AflII CTTAAG 1 cut(s) 487
AgeI ACCGGT 1 cut(s) 1950
AgsI TTSAA 7 cut(s) 38, 95, 320, 1007, 1856, 1880, 1904
AhdI GACNNNNNGTC 1 cut(s) 832
AjnI CCWGG 3 cut(s) 164, 1884, 2002
AleI CACNNNNGTG 1 cut(s) 612
AloI GAACNNNNNNTCC 2 cut(s) 801, 833
AluBI AGCT 6 cut(s) 71, 76, 137, 294, 1634, 1769
AluI AGCT 6 cut(s) 71, 76, 137, 294, 1634, 1769
Alw21I GWGCWC 3 cut(s) 574, 970, 1847
Alw26I GTCTC 5 cut(s) 437, 532, 1074, 1442, 1856
AlwI GGATC 5 cut(s) 2, 270, 449, 912, 1487
AlwNI CAGNNNCTG 1 cut(s) 330
Ama87I CYCGRG 2 cut(s) 529, 1662
ApeKI GCWGC 6 cut(s) 137, 425, 653, 803, 1769, 2009
ApoI RAATTY 3 cut(s) 83, 695, 1360
ArsI GACNNNNNNTTYG 2 cut(s) 1897, 1929
AsiGI ACCGGT 1 cut(s) 1950
Asp700I GAANNNNTTC 3 cut(s) 198, 1596, 1899
AspLEI GCGC 1 cut(s) 425
AsuC2I CCSGG 1 cut(s) 1748
AsuHPI GGTGA 3 cut(s) 785, 1336, 1473
AsuII TTCGAA 1 cut(s) 1476
AvaI CYCGRG 2 cut(s) 529, 1662
AvaII GGWCC 5 cut(s) 269, 276, 557, 721, 1039
BauI CACGAG 1 cut(s) 513
BbsI GAAGAC 1 cut(s) 858
Bbv12I GWGCWC 3 cut(s) 574, 970, 1847
BbvI GCAGC 6 cut(s) 124, 412, 665, 790, 1756, 2021
BccI CCATC 8 cut(s) 671, 780, 793, 928, 1108, 1333, 1522, 1538
BceAI ACGGC 2 cut(s) 1743, 1974
BciT130I CCWGG 3 cut(s) 166, 1886, 2004
BciVI GTATCC 1 cut(s) 1969
BclI TGATCA 2 cut(s) 790, 972
BcnI CCSGG 1 cut(s) 1748
BcoDI GTCTC 5 cut(s) 437, 532, 1074, 1442, 1856
BfaI CTAG 2 cut(s) 68, 726
BfoI RGCGCY 1 cut(s) 426
BfrI CTTAAG 1 cut(s) 487
BfuAI ACCTGC 3 cut(s) 66, 994, 1685
BfuI GTATCC 1 cut(s) 1969
BglI GCCNNNNNGGC 1 cut(s) 1995
BisI GCNGC 6 cut(s) 138, 426, 654, 804, 1770, 2010
BlpI GCTNAGC 1 cut(s) 72
BlsI GCNGC 6 cut(s) 139, 427, 655, 805, 1771, 2011
Bme1390I CCNGG 4 cut(s) 166, 1748, 1886, 2004
Bme18I GGWCC 5 cut(s) 269, 276, 557, 721, 1039
BmeRI GACNNNNNGTC 1 cut(s) 832
BmeT110I CYCGRG 2 cut(s) 529, 1662
BmiI GGNNCC 5 cut(s) 195, 723, 1237, 1745, 1751
BmrFI CCNGG 4 cut(s) 166, 1748, 1886, 2004
BmsI GCATC 4 cut(s) 309, 555, 699, 1165
BpiI GAAGAC 1 cut(s) 858
BplI GAGNNNNNCTC 2 cut(s) 1238, 1270
BpmI CTGGAG 1 cut(s) 750
Bpu1102I GCTNAGC 1 cut(s) 72
Bpu14I TTCGAA 1 cut(s) 1476
BpuEI CTTGAG 1 cut(s) 1553
BpuMI CCSGG 1 cut(s) 1748
BsaBI GATNNNNATC 1 cut(s) 1392
BsaI GGTCTC 1 cut(s) 437
BsaWI WCCGGW 1 cut(s) 1950
BsaXI ACNNNNNCTCC 4 cut(s) 1144, 1174, 1422, 1452
Bsc4I CCNNNNNNNGG 8 cut(s) 285, 749, 949, 1297, 1663, 1664, 1741, 1950
Bse118I RCCGGY 1 cut(s) 1950
Bse8I GATNNNNATC 1 cut(s) 1392
BseBI CCWGG 3 cut(s) 166, 1886, 2004
BseJI GATNNNNATC 1 cut(s) 1392
BseLI CCNNNNNNNGG 8 cut(s) 285, 749, 949, 1297, 1663, 1664, 1741, 1950
BseMII CTCAG 5 cut(s) 63, 698, 1159, 1236, 1447
BseRI GAGGAG 2 cut(s) 1228, 1537
BseXI GCAGC 6 cut(s) 124, 412, 665, 790, 1756, 2021
BsgI GTGCAG 1 cut(s) 1713
BshTI ACCGGT 1 cut(s) 1950
BsiHKAI GWGCWC 3 cut(s) 574, 970, 1847
BsiHKCI CYCGRG 2 cut(s) 529, 1662
BsiSI CCGG 3 cut(s) 1727, 1747, 1951
BslFI GGGAC 4 cut(s) 707, 1402, 1599, 1680
BslI CCNNNNNNNGG 8 cut(s) 285, 749, 949, 1297, 1663, 1664, 1741, 1950
BsmAI GTCTC 5 cut(s) 437, 532, 1074, 1442, 1856
BsmFI GGGAC 4 cut(s) 707, 1402, 1599, 1680
Bso31I GGTCTC 1 cut(s) 437
BsoBI CYCGRG 2 cut(s) 529, 1662
Bsp119I TTCGAA 1 cut(s) 1476
Bsp1286I GDGCHC 3 cut(s) 574, 970, 1847
Bsp143I GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
Bsp1720I GCTNAGC 1 cut(s) 72
Bsp19I CCATGG 1 cut(s) 272
BspACI CCGC 4 cut(s) 447, 544, 637, 1573
BspCNI CTCAG 5 cut(s) 64, 697, 1158, 1237, 1446
BspLI GGNNCC 5 cut(s) 195, 723, 1237, 1745, 1751
BspMI ACCTGC 3 cut(s) 66, 994, 1685
BspPI GGATC 5 cut(s) 2, 270, 449, 912, 1487
BspQI GCTCTTC 2 cut(s) 892, 1759
BspT104I TTCGAA 1 cut(s) 1476
BspTI CTTAAG 1 cut(s) 487
BspTNI GGTCTC 1 cut(s) 437
BsrFI RCCGGY 1 cut(s) 1950
BssAI RCCGGY 1 cut(s) 1950
BssMI GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
BssSI CACGAG 1 cut(s) 513
BssT1I CCWWGG 4 cut(s) 175, 272, 748, 948
Bst2BI CACGAG 1 cut(s) 513
Bst2UI CCWGG 3 cut(s) 166, 1886, 2004
Bst4CI ACNGT 4 cut(s) 212, 229, 614, 1981
Bst6I CTCTTC 6 cut(s) 892, 940, 1059, 1326, 1759, 1774
BstAFI CTTAAG 1 cut(s) 487
BstBI TTCGAA 1 cut(s) 1476
BstC8I GCNNGC 4 cut(s) 326, 570, 714, 2000
BstDEI CTNAG 5 cut(s) 72, 684, 1145, 1245, 1433
BstDSI CCRYGG 4 cut(s) 272, 560, 1759, 1990
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 1 cut(s) 425
BstKTI GATC 9 cut(s) 10, 265, 457, 551, 793, 907, 975, 1390, 1495
BstMAI GTCTC 5 cut(s) 437, 532, 1074, 1442, 1856
BstMBI GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
BstMWI GCNNNNNNNGC 2 cut(s) 1156, 1995
BstNI CCWGG 3 cut(s) 166, 1886, 2004
BstSCI CCNGG 4 cut(s) 164, 1746, 1884, 2002
BstV1I GCAGC 6 cut(s) 124, 412, 665, 790, 1756, 2021
BstV2I GAAGAC 1 cut(s) 858
BstX2I RGATCY 3 cut(s) 262, 454, 904
BstXI CCANNNNNNTGG 1 cut(s) 474
BstYI RGATCY 3 cut(s) 262, 454, 904
BsuI GTATCC 1 cut(s) 1969
BtgI CCRYGG 4 cut(s) 272, 560, 1759, 1990
BtsIMutI CAGTG 2 cut(s) 234, 968
BveI ACCTGC 3 cut(s) 66, 994, 1685
Cac8I GCNNGC 4 cut(s) 326, 570, 714, 2000
CaiI CAGNNNCTG 1 cut(s) 330
CfoI GCGC 1 cut(s) 425
Cfr10I RCCGGY 1 cut(s) 1950
CseI GACGC 1 cut(s) 242
CspAI ACCGGT 1 cut(s) 1950
CviAII CATG 7 cut(s) 273, 374, 629, 650, 821, 893, 2025
DdeI CTNAG 5 cut(s) 72, 684, 1145, 1245, 1433
DpnI GATC 9 cut(s) 9, 264, 456, 550, 792, 906, 974, 1389, 1494
DpnII GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
DrdI GACNNNNNNGTC 1 cut(s) 860
DriI GACNNNNNGTC 1 cut(s) 832
DseDI GACNNNNNNGTC 1 cut(s) 860
EaeI YGGCCR 3 cut(s) 3, 616, 1987
Eam1104I CTCTTC 6 cut(s) 892, 940, 1059, 1326, 1759, 1774
Eam1105I GACNNNNNGTC 1 cut(s) 832
EarI CTCTTC 6 cut(s) 892, 940, 1059, 1326, 1759, 1774
EciI GGCGGA 1 cut(s) 533
Eco130I CCWWGG 4 cut(s) 175, 272, 748, 948
Eco147I AGGCCT 4 cut(s) 206, 716, 1150, 1270
Eco31I GGTCTC 1 cut(s) 437
Eco47I GGWCC 5 cut(s) 269, 276, 557, 721, 1039
Eco57I CTGAAG 2 cut(s) 280, 471
Eco88I CYCGRG 2 cut(s) 529, 1662
EcoRI GAATTC 1 cut(s) 83
EcoRII CCWGG 3 cut(s) 164, 1884, 2002
EcoT14I CCWWGG 4 cut(s) 175, 272, 748, 948
ErhI CCWWGG 4 cut(s) 175, 272, 748, 948
FaeI CATG 7 cut(s) 276, 377, 632, 653, 824, 896, 2028
FaqI GGGAC 4 cut(s) 707, 1402, 1599, 1680
FatI CATG 7 cut(s) 272, 373, 628, 649, 820, 892, 2024
FauI CCCGC 1 cut(s) 644
FbaI TGATCA 2 cut(s) 790, 972
Fnu4HI GCNGC 6 cut(s) 138, 426, 654, 804, 1770, 2010
Fsp4HI GCNGC 6 cut(s) 138, 426, 654, 804, 1770, 2010
FspBI CTAG 2 cut(s) 68, 726
GlaI GCGC 1 cut(s) 424
GluI GCNGC 6 cut(s) 138, 426, 654, 804, 1770, 2010
GsuI CTGGAG 1 cut(s) 750
HaeII RGCGCY 1 cut(s) 426
HapII CCGG 3 cut(s) 1727, 1747, 1951
HgaI GACGC 1 cut(s) 242
HhaI GCGC 1 cut(s) 425
Hin1II CATG 7 cut(s) 276, 377, 632, 653, 824, 896, 2028
Hin6I GCGC 1 cut(s) 423
HinP1I GCGC 1 cut(s) 423
HincII GTYRAC 2 cut(s) 31, 826
HindII GTYRAC 2 cut(s) 31, 826
HpaII CCGG 3 cut(s) 1727, 1747, 1951
HphI GGTGA 3 cut(s) 785, 1336, 1473
Hpy166II GTNNAC 3 cut(s) 31, 826, 1796
Hpy8I GTNNAC 3 cut(s) 31, 826, 1796
HpyCH4III ACNGT 4 cut(s) 212, 229, 614, 1981
HpyCH4IV ACGT 2 cut(s) 1017, 1612
HpyCH4V TGCA 8 cut(s) 367, 428, 502, 645, 653, 712, 1694, 1772
HpyF10VI GCNNNNNNNGC 2 cut(s) 1156, 1995
HpyF3I CTNAG 5 cut(s) 72, 684, 1145, 1245, 1433
HpySE526I ACGT 2 cut(s) 1017, 1612
Hsp92II CATG 7 cut(s) 276, 377, 632, 653, 824, 896, 2028
HspAI GCGC 1 cut(s) 423
Ksp22I TGATCA 2 cut(s) 790, 972
Kzo9I GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
LguI GCTCTTC 2 cut(s) 892, 1759
LmnI GCTCC 3 cut(s) 769, 965, 1241
Lsp1109I GCAGC 6 cut(s) 124, 412, 665, 790, 1756, 2021
LweI GCATC 4 cut(s) 309, 555, 699, 1165
MaeI CTAG 2 cut(s) 68, 726
MaeII ACGT 2 cut(s) 1017, 1612
MaeIII GTNAC 2 cut(s) 332, 605
MalI GATC 9 cut(s) 9, 264, 456, 550, 792, 906, 974, 1389, 1494
MboI GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
MfeI CAATTG 1 cut(s) 429
MflI RGATCY 3 cut(s) 262, 454, 904
MhlI GDGCHC 3 cut(s) 574, 970, 1847
MluCI AATT 9 cut(s) 83, 198, 429, 695, 1222, 1360, 1449, 1835, 1961
MlyI GAGTC 3 cut(s) 615, 1022, 1858
MmeI TCCRAC 3 cut(s) 181, 455, 1947
MroXI GAANNNNTTC 3 cut(s) 198, 1596, 1899
MseI TTAA 5 cut(s) 129, 488, 759, 1641, 1983
MslI CAYNNNNRTG 2 cut(s) 129, 612
MspA1I CMGCKG 2 cut(s) 449, 1634
MspCI CTTAAG 1 cut(s) 487
MspI CCGG 3 cut(s) 1727, 1747, 1951
MspR9I CCNGG 4 cut(s) 166, 1748, 1886, 2004
MunI CAATTG 1 cut(s) 429
MvaI CCWGG 3 cut(s) 166, 1886, 2004
MwoI GCNNNNNNNGC 2 cut(s) 1156, 1995
NciI CCSGG 1 cut(s) 1748
NcoI CCATGG 1 cut(s) 272
NdeII GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
NlaIII CATG 7 cut(s) 276, 377, 632, 653, 824, 896, 2028
NlaIV GGNNCC 5 cut(s) 195, 723, 1237, 1745, 1751
NmeAIII GCCGAG 1 cut(s) 1778
NmuCI GTSAC 2 cut(s) 332, 605
NspV TTCGAA 1 cut(s) 1476
OliI CACNNNNGTG 1 cut(s) 612
PceI AGGCCT 4 cut(s) 206, 716, 1150, 1270
PciSI GCTCTTC 2 cut(s) 892, 1759
PdmI GAANNNNTTC 3 cut(s) 198, 1596, 1899
PfeI GAWTC 7 cut(s) 492, 509, 534, 732, 1409, 1478, 1970
PflFI GACNNNGTC 3 cut(s) 252, 624, 1671
PflMI CCANNNNNTGG 1 cut(s) 949
PinAI ACCGGT 1 cut(s) 1950
PkrI GCNGC 6 cut(s) 139, 427, 655, 805, 1771, 2011
PleI GAGTC 3 cut(s) 615, 1022, 1858
PpsI GAGTC 3 cut(s) 615, 1022, 1858
Psp6I CCWGG 3 cut(s) 164, 1884, 2002
PspGI CCWGG 3 cut(s) 164, 1884, 2002
PspN4I GGNNCC 5 cut(s) 195, 723, 1237, 1745, 1751
PstNI CAGNNNCTG 1 cut(s) 330
PsuI RGATCY 3 cut(s) 262, 454, 904
PsyI GACNNNGTC 3 cut(s) 252, 624, 1671
PvuII CAGCTG 1 cut(s) 1634
RseI CAYNNNNRTG 2 cut(s) 129, 612
SapI GCTCTTC 2 cut(s) 892, 1759
SaqAI TTAA 5 cut(s) 129, 488, 759, 1641, 1983
SatI GCNGC 6 cut(s) 138, 426, 654, 804, 1770, 2010
Sau3AI GATC 9 cut(s) 7, 262, 454, 548, 790, 904, 972, 1387, 1492
SchI GAGTC 3 cut(s) 615, 1022, 1858
ScrFI CCNGG 4 cut(s) 166, 1748, 1886, 2004
SduI GDGCHC 3 cut(s) 574, 970, 1847
SfaNI GCATC 4 cut(s) 309, 555, 699, 1165
SfuI TTCGAA 1 cut(s) 1476
SinI GGWCC 5 cut(s) 269, 276, 557, 721, 1039
SmiMI CAYNNNNRTG 2 cut(s) 129, 612
SmlI CTYRAG 2 cut(s) 487, 1568
SmoI CTYRAG 2 cut(s) 487, 1568
Sse9I AATT 9 cut(s) 83, 198, 429, 695, 1222, 1360, 1449, 1835, 1961
SseBI AGGCCT 4 cut(s) 206, 716, 1150, 1270
SsiI CCGC 4 cut(s) 447, 544, 637, 1573
SspMI CTAG 2 cut(s) 68, 726
StuI AGGCCT 4 cut(s) 206, 716, 1150, 1270
StyD4I CCNGG 4 cut(s) 164, 1746, 1884, 2002
StyI CCWWGG 4 cut(s) 175, 272, 748, 948
TaaI ACNGT 4 cut(s) 212, 229, 614, 1981
TaiI ACGT 2 cut(s) 1020, 1615
TaqI TCGA 4 cut(s) 1407, 1476, 1720, 1821
TaqII GACCGA 2 cut(s) 614, 709
TasI AATT 9 cut(s) 83, 198, 429, 695, 1222, 1360, 1449, 1835, 1961
TfiI GAWTC 7 cut(s) 492, 509, 534, 732, 1409, 1478, 1970
Tru1I TTAA 5 cut(s) 129, 488, 759, 1641, 1983
Tru9I TTAA 5 cut(s) 129, 488, 759, 1641, 1983
TscAI CASTG 2 cut(s) 234, 975
TseFI GTSAC 2 cut(s) 332, 605
TseI GCWGC 6 cut(s) 137, 425, 653, 803, 1769, 2009
Tsp45I GTSAC 2 cut(s) 332, 605
TspDTI ATGAA 9 cut(s) 96, 176, 252, 362, 600, 1188, 1544, 1662, 1974
TspGWI ACGGA 3 cut(s) 268, 577, 1404
TspRI CASTG 2 cut(s) 234, 975
Tth111I GACNNNGTC 3 cut(s) 252, 624, 1671
Van91I CCANNNNNTGG 1 cut(s) 949
Vha464I CTTAAG 1 cut(s) 487
VpaK11BI GGWCC 5 cut(s) 269, 276, 557, 721, 1039
XapI RAATTY 3 cut(s) 83, 695, 1360
XmnI GAANNNNTTC 3 cut(s) 198, 1596, 1899
XspI CTAG 2 cut(s) 68, 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.