Rroxscaffold_7G00198180

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0000503
Physical Location & Seq
Reverse (-)
43220904 .. 43232735
11832 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00198180.1

Sequence Viewer

Length: 2133 bp
ATGAGGATGGACCTTGAGAGTTGCATGGGATTAAATGACCCAAGACAGATGCTTCCACCTCCACCTGGATCTTTTGTGGATCGTGACGAACTAATTCAACATGTTGGGGACTTTGCTGTGTCACAGGGTTATGTTGTAACTATCAAGCAGTCTAAGAGGGATAGAGTAGTTATCCTTGGTTGTGACAGAGGAGGTGTTTACCGTAATAGGCAGAAACAGGTTGATGAGTCCTGTAGTGAACAGAACAAAAGGAGAAAAGCAGGATCTCGGCTGACAAATTGTCCTTTTGAAGCTGTGGGGAAAAAGGGTGATGGCTTGTGGGTACTTACTGTAAAAAATGGAACCCACAACCATGAACCCTTGAAGGATATTTCAGAACATCCCTCTGCTCGTCGTTTCAACGAGAGAGAAGTTTTGATGATTAAAGAGATGACAGAATCTGGTTTAAAACCTCGCCAAATTCTAAAGAGATTAAGACAAAGCAATCCAGATCTTTTATCAACTCCGAAGCATGTTTATAATGTTAAAGCAAAGCTTCGCCAAGGAAACACGGGAGTTAGAAACTTCAAGTCTTTGAGTCCACAGAAATCATTGGGAAGGAACGATTACTCTGTGGTCATCAAGCCATCTTGGAGGCAGCGCAACCCCCAGAGAGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATTTGCCTCCATTGATGTTTTAAACCCTGCAACACAGCAAGTTGCTTCTCAAGTACCTTTAACAACAAATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGTGCCTTTCCATTGTGGCGATGTACACCTATTACTACTCGTCAGCGTATTATGTTCAAGTTCCAAGAGCTTATACGCAGAGACATTGATAAGATTGCTATGACCATTACAAGTGAACATGGCAAAGCATTGAAGGATGCATATGATGATGTCTCACGTGGGCTAGAGGTGGTCGAACATGCTTGTGGACTTGCAACTCTGCAGATGGGAGATTTTATTTCCAATGTATCACATGGAATTGATAGCTACAGCATTAGGGAGCCACTTGGTGTTTGTGCTGGGATTTGCCCTTGTGATTTTCCAGCCATGATTCCCTTATGGATGTTCACTACTGCAGTGACATGTGGTAATTCATTTATTCTAAAGCCATCAGAGATGGATCCAGGTGCATCTGTGATGCTTGCAGAGTTGGCAATGGAGGCTGGCTTGCCAAGTGGGGTGTTAAATATTGTTCATGGCACTGATGAAACTTTTGATGCTATTTGTGATGATGATGACATTAAAGCTATCTCATTTGTTGGAACAAAAGCAGCAGGTGCTTACATTTATTCCCGAGCATCGGCTAAGGGGAAACGTATCCAGTCCAATGTTGGAGCGAAAAATCATGCTATTGTCATGCCTGATGCAAGCATGGACGCTACTCTGGATGCTCTAGTTGCTGCTGGCTTTGGTGCTGCAGGACAAAGGTGCACAGCACTTACAACAGTTGTTTTTGTTGGAGGCATACATCTATGGGAAGACAAACTTGTAGAGCGTGCCAAAGCACTCAAGGTTGATGCCGGATCACAAACAGATGTAGACATTGGTCCAGTGATTAGCAAGCAGGTAAAGGAACAGATATGCAGATTGATTCAAACAGGTGTTGAAAGTGGTGCAAAACTGGTGCTTGATGGTAGAAATATCTTGGTTCCCGGATTTGAGCATGGCAACTTCATTGGTCCCACCATCTTAGCCAATGTCACAGCAGAAATGGAGTGTTATAAGGAAGAAATCTTTGGCCCAGTTCTTCTCTGTATGGAGGCTGACAACATTGAAGATGCCATAAACATCGTCAACAAAAATAAATATGGCAATGGAGCTTCTATCTTTACAACGTCTGGTGTGGCTGCAAGAAAATTCCAGACTGAGATTGAAGTGGGCCAGGTTGGCATAAATGTTCCCATCTCAGTTGCATTGCCCTATTCCTTGTTTACGAGCTCCTGGCCATCTCTTGCCGGTGATCTTAATTTTGATGGCAAAGCAGGGATTCAGTTTTACACCCAGATGAAGACTGTGACTCAACAATGGAAGGATTTAGCTGACAGTGATGGACAAGCCTTGCTAATGTCAACTTGA

Protein Analysis

710

Amino Acids

77.74

Weight (kDa)

8.06

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 227 - 691 3.1e-130 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 519, 1779
AarI CACCTGC 1 cut(s) 1322
Acc36I ACCTGC 2 cut(s) 1322, 1612
AccI GTMKAC 1 cut(s) 1596
AclWI GGATC 6 cut(s) 76, 87, 271, 1172, 1185, 1588
AcoI YGGCCR 1 cut(s) 2000
AcsI RAATTY 2 cut(s) 459, 1913
AcvI CACGTG 1 cut(s) 956
AdeI CACNNNGTG 1 cut(s) 1067
AfaI GTAC 3 cut(s) 324, 750, 823
AfiI CCNNNNNNNGG 2 cut(s) 65, 1357
AflIII ACRYGT 2 cut(s) 100, 1139
AhdI GACNNNNNGTC 1 cut(s) 279
AjnI CCWGG 4 cut(s) 64, 1180, 1938, 1997
AjuI GAANNNNNNNTTGG 2 cut(s) 1776, 1808
AluBI AGCT 9 cut(s) 293, 535, 779, 868, 1044, 1304, 1877, 1995, 2096
AluI AGCT 9 cut(s) 293, 535, 779, 868, 1044, 1304, 1877, 1995, 2096
Alw21I GWGCWC 2 cut(s) 1490, 1997
Alw26I GTCTC 2 cut(s) 873, 955
Alw44I GTGCAC 1 cut(s) 1486
AlwI GGATC 6 cut(s) 76, 87, 271, 1172, 1185, 1588
AlwNI CAGNNNCTG 1 cut(s) 440
Ama87I CYCGRG 1 cut(s) 1350
AoxI GGCC 3 cut(s) 1795, 1936, 2000
ApaLI GTGCAC 1 cut(s) 1486
ApeKI GCWGC 6 cut(s) 637, 779, 1328, 1457, 1472, 1904
ApoI RAATTY 2 cut(s) 459, 1913
Asp700I GAANNNNTTC 1 cut(s) 93
AspLEI GCGC 1 cut(s) 642
AspS9I GGNCC 5 cut(s) 10, 1604, 1736, 1796, 1936
AsuC2I CCSGG 1 cut(s) 1710
AsuHPI GGTGA 2 cut(s) 320, 2027
AvaI CYCGRG 1 cut(s) 1350
AvaII GGWCC 3 cut(s) 10, 1604, 1736
BaeGI GKGCMC 1 cut(s) 1490
BalI TGGCCA 1 cut(s) 2002
BamHI GGATCC 1 cut(s) 1177
BanII GRGCYC 1 cut(s) 1997
BbrPI CACGTG 1 cut(s) 956
BbsI GAAGAC 2 cut(s) 1542, 2072
Bbv12I GWGCWC 2 cut(s) 1490, 1997
BbvI GCAGC 6 cut(s) 649, 766, 1340, 1444, 1459, 1891
BciT130I CCWGG 4 cut(s) 66, 1182, 1940, 1999
BciVI GTATCC 1 cut(s) 1385
BcnI CCSGG 1 cut(s) 1710
BcoDI GTCTC 2 cut(s) 873, 955
BfaI CTAG 2 cut(s) 962, 1451
BfmI CTRYAG 6 cut(s) 232, 780, 998, 1045, 1131, 1473
BfuAI ACCTGC 2 cut(s) 1322, 1612
BfuI GTATCC 1 cut(s) 1385
BglI GCCNNNNNGGC 1 cut(s) 1944
BglII AGATCT 1 cut(s) 490
BisI GCNGC 6 cut(s) 638, 780, 1329, 1458, 1473, 1905
BlsI GCNGC 6 cut(s) 639, 781, 1330, 1459, 1474, 1906
Bme1390I CCNGG 5 cut(s) 66, 1182, 1710, 1940, 1999
Bme18I GGWCC 3 cut(s) 10, 1604, 1736
BmeRI GACNNNNNGTC 1 cut(s) 279
BmeT110I CYCGRG 1 cut(s) 1350
BmgT120I GGNCC 5 cut(s) 10, 1604, 1736, 1796, 1936
BmiI GGNNCC 5 cut(s) 343, 1059, 1179, 1707, 1738
BmrFI CCNGG 5 cut(s) 66, 1182, 1710, 1940, 1999
BmrI ACTGGG 1 cut(s) 1793
BmuI ACTGGG 1 cut(s) 1793
BoxI GACNNNNGTC 1 cut(s) 1602
BpiI GAAGAC 2 cut(s) 1542, 2072
Bpu10I CCTNAGC 1 cut(s) 1362
BpuEI CTTGAG 3 cut(s) 35, 729, 1550
BpuMI CCSGG 1 cut(s) 1710
BsaAI YACGTR 1 cut(s) 956
BsaJI CCNNGG 2 cut(s) 175, 541
Bsc4I CCNNNNNNNGG 2 cut(s) 65, 1357
Bse118I RCCGGY 1 cut(s) 2012
Bse1I ACTGG 4 cut(s) 1378, 1607, 1683, 1799
Bse3DI GCAATG 3 cut(s) 1218, 1876, 1970
BseBI CCWGG 4 cut(s) 66, 1182, 1940, 1999
BseDI CCNNGG 2 cut(s) 175, 541
BseGI GGATG 5 cut(s) 12, 379, 940, 1125, 1450
BseLI CCNNNNNNNGG 2 cut(s) 65, 1357
BseMI GCAATG 3 cut(s) 1218, 1876, 1970
BseMII CTCAG 2 cut(s) 1914, 1977
BseNI ACTGG 4 cut(s) 1378, 1607, 1683, 1799
BseRI GAGGAG 2 cut(s) 204, 782
BseSI GKGCMC 1 cut(s) 1490
BseXI GCAGC 6 cut(s) 649, 766, 1340, 1444, 1459, 1891
BseYI CCCAGC 1 cut(s) 1076
BshFI GGCC 3 cut(s) 1797, 1938, 2002
BsiHKAI GWGCWC 2 cut(s) 1490, 1997
BsiHKCI CYCGRG 1 cut(s) 1350
BsiSI CCGG 3 cut(s) 1578, 1710, 2013
BslFI GGGAC 2 cut(s) 122, 1722
BslI CCNNNNNNNGG 2 cut(s) 65, 1357
BsmAI GTCTC 2 cut(s) 873, 955
BsmFI GGGAC 2 cut(s) 122, 1722
BsnI GGCC 3 cut(s) 1797, 1938, 2002
BsoBI CYCGRG 1 cut(s) 1350
Bsp1286I GDGCHC 2 cut(s) 1490, 1997
Bsp1407I TGTACA 1 cut(s) 821
Bsp143I GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
BspANI GGCC 3 cut(s) 1797, 1938, 2002
BspCNI CTCAG 2 cut(s) 1915, 1976
BspLI GGNNCC 5 cut(s) 343, 1059, 1179, 1707, 1738
BspMAI CTGCAG 4 cut(s) 784, 1002, 1135, 1477
BspMI ACCTGC 2 cut(s) 1322, 1612
BspPI GGATC 6 cut(s) 76, 87, 271, 1172, 1185, 1588
BsrDI GCAATG 3 cut(s) 1218, 1876, 1970
BsrFI RCCGGY 1 cut(s) 2012
BsrGI TGTACA 1 cut(s) 821
BsrI ACTGG 4 cut(s) 1378, 1607, 1683, 1799
BssAI RCCGGY 1 cut(s) 2012
BssECI CCNNGG 2 cut(s) 175, 541
BssMI GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
BssT1I CCWWGG 2 cut(s) 175, 541
Bst2UI CCWGG 4 cut(s) 66, 1182, 1940, 1999
Bst4CI ACNGT 6 cut(s) 203, 331, 693, 1504, 2071, 2102
BstAPI GCANNNNNTGC 2 cut(s) 800, 1334
BstAUI TGTACA 1 cut(s) 821
BstBAI YACGTR 1 cut(s) 956
BstC8I GCNNGC 7 cut(s) 1200, 1222, 1226, 1426, 1462, 1554, 1619
BstDEI CTNAG 5 cut(s) 153, 1362, 1747, 1923, 1963
BstF5I GGATG 5 cut(s) 12, 379, 940, 1125, 1450
BstHHI GCGC 1 cut(s) 642
BstKTI GATC 7 cut(s) 71, 82, 266, 493, 1180, 1583, 2020
BstMAI GTCTC 2 cut(s) 873, 955
BstMBI GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
BstMWI GCNNNNNNNGC 6 cut(s) 800, 1208, 1217, 1334, 1454, 1944
BstNI CCWGG 4 cut(s) 66, 1182, 1940, 1999
BstNSI RCATGY 4 cut(s) 104, 515, 980, 1143
BstPAI GACNNNNGTC 1 cut(s) 1602
BstSCI CCNGG 5 cut(s) 64, 1180, 1708, 1938, 1997
BstSFI CTRYAG 6 cut(s) 232, 780, 998, 1045, 1131, 1473
BstSLI GKGCMC 1 cut(s) 1490
BstV1I GCAGC 6 cut(s) 649, 766, 1340, 1444, 1459, 1891
BstV2I GAAGAC 2 cut(s) 1542, 2072
BstX2I RGATCY 4 cut(s) 68, 263, 490, 1177
BstYI RGATCY 4 cut(s) 68, 263, 490, 1177
BsuI GTATCC 1 cut(s) 1385
BsuRI GGCC 3 cut(s) 1797, 1938, 2002
BtgZI GCGATG 1 cut(s) 832
BtsCI GGATG 5 cut(s) 12, 379, 940, 1125, 1450
BtsI GCAGTG 1 cut(s) 1140
BtsIMutI CAGTG 4 cut(s) 1140, 1257, 1614, 2107
BveI ACCTGC 2 cut(s) 1322, 1612
Cac8I GCNNGC 7 cut(s) 1200, 1222, 1226, 1426, 1462, 1554, 1619
CaiI CAGNNNCTG 1 cut(s) 440
CfoI GCGC 1 cut(s) 642
Cfr10I RCCGGY 1 cut(s) 2012
Cfr13I GGNCC 5 cut(s) 10, 1604, 1736, 1796, 1936
CseI GACGC 1 cut(s) 1442
Csp6I GTAC 3 cut(s) 323, 749, 822
CviQI GTAC 3 cut(s) 323, 749, 822
DdeI CTNAG 5 cut(s) 153, 1362, 1747, 1923, 1963
DpnI GATC 7 cut(s) 70, 81, 265, 492, 1179, 1582, 2019
DpnII GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
DraI TTTAAA 2 cut(s) 447, 717
DraIII CACNNNGTG 1 cut(s) 1067
DriI GACNNNNNGTC 1 cut(s) 279
EaeI YGGCCR 1 cut(s) 2000
Eam1105I GACNNNNNGTC 1 cut(s) 279
Ecl136II GAGCTC 1 cut(s) 1995
Eco130I CCWWGG 2 cut(s) 175, 541
Eco24I GRGCYC 1 cut(s) 1997
Eco47I GGWCC 3 cut(s) 10, 1604, 1736
Eco53kI GAGCTC 1 cut(s) 1995
Eco72I CACGTG 1 cut(s) 956
Eco88I CYCGRG 1 cut(s) 1350
EcoICRI GAGCTC 1 cut(s) 1995
EcoRII CCWGG 4 cut(s) 64, 1180, 1938, 1997
EcoT14I CCWWGG 2 cut(s) 175, 541
EcoT22I ATGCAT 1 cut(s) 940
EcoT38I GRGCYC 1 cut(s) 1997
ErhI CCWWGG 2 cut(s) 175, 541
FalI AAGNNNNNCTT 4 cut(s) 519, 551, 1527, 1559
FaqI GGGAC 2 cut(s) 122, 1722
FauNDI CATATG 1 cut(s) 940
FblI GTMKAC 1 cut(s) 1596
Fnu4HI GCNGC 6 cut(s) 638, 780, 1329, 1458, 1473, 1905
FokI GGATG 5 cut(s) 19, 366, 947, 1132, 1457
FriOI GRGCYC 1 cut(s) 1997
Fsp4HI GCNGC 6 cut(s) 638, 780, 1329, 1458, 1473, 1905
FspBI CTAG 2 cut(s) 962, 1451
GlaI GCGC 1 cut(s) 641
GluI GCNGC 6 cut(s) 638, 780, 1329, 1458, 1473, 1905
GsaI CCCAGC 1 cut(s) 1080
HaeIII GGCC 3 cut(s) 1797, 1938, 2002
HapII CCGG 3 cut(s) 1578, 1710, 2013
HgaI GACGC 1 cut(s) 1442
HhaI GCGC 1 cut(s) 642
Hin6I GCGC 1 cut(s) 640
HinP1I GCGC 1 cut(s) 640
HincII GTYRAC 2 cut(s) 1852, 2127
HindII GTYRAC 2 cut(s) 1852, 2127
HindIII AAGCTT 1 cut(s) 533
HinfI GANTC 8 cut(s) 227, 437, 577, 686, 1108, 1648, 2044, 2074
HpaII CCGG 3 cut(s) 1578, 1710, 2013
HphI GGTGA 2 cut(s) 320, 2027
Hpy188I TCNGA 3 cut(s) 376, 507, 1171
Hpy188III TCNNGA 5 cut(s) 83, 488, 1350, 1442, 1918
Hpy99I CGWCG 1 cut(s) 396
HpyAV CCTTC 4 cut(s) 358, 591, 925, 2080
HpyCH4III ACNGT 6 cut(s) 203, 331, 693, 1504, 2071, 2102
HpyCH4IV ACGT 4 cut(s) 799, 955, 1372, 1892
HpyF10VI GCNNNNNNNGC 6 cut(s) 800, 1208, 1217, 1334, 1454, 1944
HpyF3I CTNAG 5 cut(s) 153, 1362, 1747, 1923, 1963
HpySE526I ACGT 4 cut(s) 799, 955, 1372, 1892
HspAI GCGC 1 cut(s) 640
Kzo9I GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
LmnI GCTCC 4 cut(s) 1057, 1391, 1874, 2000
Lsp1109I GCAGC 6 cut(s) 649, 766, 1340, 1444, 1459, 1891
MaeI CTAG 2 cut(s) 962, 1451
MaeII ACGT 4 cut(s) 799, 955, 1372, 1892
MaeIII GTNAC 7 cut(s) 83, 120, 136, 182, 1135, 1756, 2071
MalI GATC 7 cut(s) 70, 81, 265, 492, 1179, 1582, 2019
MboI GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
MboII GAAGA 5 cut(s) 1547, 1796, 1796, 1844, 2077
MflI RGATCY 4 cut(s) 68, 263, 490, 1177
MhlI GDGCHC 2 cut(s) 1490, 1997
MlsI TGGCCA 1 cut(s) 2002
MluCI AATT 7 cut(s) 93, 277, 459, 1035, 1147, 1913, 2023
MluNI TGGCCA 1 cut(s) 2002
MlyI GAGTC 3 cut(s) 236, 586, 2068
MmeI TCCRAC 3 cut(s) 1297, 1369, 1495
Mox20I TGGCCA 1 cut(s) 2002
Mph1103I ATGCAT 1 cut(s) 940
MroXI GAANNNNTTC 1 cut(s) 93
MscI TGGCCA 1 cut(s) 2002
MslI CAYNNNNRTG 3 cut(s) 351, 981, 2060
Msp20I TGGCCA 1 cut(s) 2002
MspI CCGG 3 cut(s) 1578, 1710, 2013
MspR9I CCNGG 5 cut(s) 66, 1182, 1710, 1940, 1999
MvaI CCWGG 4 cut(s) 66, 1182, 1940, 1999
MwoI GCNNNNNNNGC 6 cut(s) 800, 1208, 1217, 1334, 1454, 1944
NciI CCSGG 1 cut(s) 1710
NdeI CATATG 1 cut(s) 940
NdeII GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
NlaIV GGNNCC 5 cut(s) 343, 1059, 1179, 1707, 1738
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 6 cut(s) 83, 120, 182, 1135, 1756, 2071
NsiI ATGCAT 1 cut(s) 940
NspI RCATGY 4 cut(s) 104, 515, 980, 1143
PaqCI CACCTGC 1 cut(s) 1322
PciI ACATGT 2 cut(s) 100, 1139
PdmI GAANNNNTTC 1 cut(s) 93
PfeI GAWTC 5 cut(s) 437, 686, 1108, 1648, 2044
PfoI TCCNGGA 1 cut(s) 1708
PkrI GCNGC 6 cut(s) 639, 781, 1330, 1459, 1474, 1906
PleI GAGTC 3 cut(s) 235, 585, 2068
PmaCI CACGTG 1 cut(s) 956
PmlI CACGTG 1 cut(s) 956
PpsI GAGTC 3 cut(s) 235, 585, 2068
Ppu21I YACGTR 1 cut(s) 956
PscI ACATGT 2 cut(s) 100, 1139
PshAI GACNNNNGTC 1 cut(s) 1602
PsiI TTATAA 2 cut(s) 519, 1779
Psp124BI GAGCTC 1 cut(s) 1997
Psp6I CCWGG 4 cut(s) 64, 1180, 1938, 1997
PspCI CACGTG 1 cut(s) 956
PspFI CCCAGC 1 cut(s) 1076
PspGI CCWGG 4 cut(s) 64, 1180, 1938, 1997
PspN4I GGNNCC 5 cut(s) 343, 1059, 1179, 1707, 1738
PspPI GGNCC 5 cut(s) 10, 1604, 1736, 1796, 1936
PstI CTGCAG 4 cut(s) 784, 1002, 1135, 1477
PstNI CAGNNNCTG 1 cut(s) 440
PsuI RGATCY 4 cut(s) 68, 263, 490, 1177
RsaI GTAC 3 cut(s) 324, 750, 823
RsaNI GTAC 3 cut(s) 323, 749, 822
RseI CAYNNNNRTG 3 cut(s) 351, 981, 2060
SacI GAGCTC 1 cut(s) 1997
SatI GCNGC 6 cut(s) 638, 780, 1329, 1458, 1473, 1905
Sau3AI GATC 7 cut(s) 68, 79, 263, 490, 1177, 1580, 2017
Sau96I GGNCC 5 cut(s) 10, 1604, 1736, 1796, 1936
SchI GAGTC 3 cut(s) 236, 586, 2068
ScrFI CCNGG 5 cut(s) 66, 1182, 1710, 1940, 1999
SduI GDGCHC 2 cut(s) 1490, 1997
SfcI CTRYAG 6 cut(s) 232, 780, 998, 1045, 1131, 1473
SinI GGWCC 3 cut(s) 10, 1604, 1736
SmiMI CAYNNNNRTG 3 cut(s) 351, 981, 2060
SmlI CTYRAG 3 cut(s) 14, 744, 1565
SmoI CTYRAG 3 cut(s) 14, 744, 1565
Sse9I AATT 7 cut(s) 93, 277, 459, 1035, 1147, 1913, 2023
SspI AATATT 1 cut(s) 1246
SspMI CTAG 2 cut(s) 962, 1451
SstI GAGCTC 1 cut(s) 1997
StyD4I CCNGG 5 cut(s) 64, 1180, 1708, 1938, 1997
StyI CCWWGG 2 cut(s) 175, 541
TaaI ACNGT 6 cut(s) 203, 331, 693, 1504, 2071, 2102
TaiI ACGT 4 cut(s) 802, 958, 1375, 1895
TaqI TCGA 1 cut(s) 972
TasI AATT 7 cut(s) 93, 277, 459, 1035, 1147, 1913, 2023
TatI WGTACW 1 cut(s) 821
TfiI GAWTC 5 cut(s) 437, 686, 1108, 1648, 2044
TscAI CASTG 4 cut(s) 1140, 1264, 1614, 2107
TseFI GTSAC 6 cut(s) 83, 120, 182, 1135, 1756, 2071
TseI GCWGC 6 cut(s) 637, 779, 1328, 1457, 1472, 1904
Tsp45I GTSAC 6 cut(s) 83, 120, 182, 1135, 1756, 2071
TspDTI ATGAA 6 cut(s) 369, 1140, 1241, 1278, 1720, 2078
TspRI CASTG 4 cut(s) 1140, 1264, 1614, 2107
VneI GTGCAC 1 cut(s) 1486
VpaK11BI GGWCC 3 cut(s) 10, 1604, 1736
XapI RAATTY 2 cut(s) 459, 1913
XceI RCATGY 4 cut(s) 104, 515, 980, 1143
XcmI CCANNNNNNNNNTGG 1 cut(s) 1385
XmiI GTMKAC 1 cut(s) 1596
XmnI GAANNNNTTC 1 cut(s) 93
XspI CTAG 2 cut(s) 962, 1451
Zsp2I ATGCAT 1 cut(s) 940
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.