RLG00000013819

Aldehyde dehydrogenase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
Physical Location & Seq
Reverse (-)
41811699 .. 41827769
16071 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013819

Sequence Viewer

Length: 2535 bp
ATGCAAAGTTTGGTTCAGTTTTACTTGTTTCTTATTTGTTTTTCTGCTGTTCTTGAGTCTGTTCAAAATTTTCTGGGATTCTTTGGGATGGATTTTGTGTTTGGGGTTTTGTTGTACGGTCGTTTCTCGCCGCTTTTTGTGTTAGGGTTGTCTCTCATGTTCGGGTTTGGGTTGTTATACCATTACAACTACTTGATTAAATTCCTATGTGACAATAGAGCGAAAGCGAGTGACTTTAGTAATGGGTTTTGCTCAAAATGCGGTTCTCATGAAGTTTGTGCTTCAAAGGCCGTGTATTGCAAATCTGAACCACCGAAATCATTGGAGAATTTACAGTCACCAAATACAGATGGTTTTCTGTTAACAAAAATTGTCAAGACAGAAGATACAATTGAAGGAAAAGATGATAATGACGGTGATAATGATGATGAGAATGTTTGTTGTAAGGAGGATGAAGTGTTTGATGTTCTGTCATTGAGGAAATTGGTGAAGATCGAGCGCCGGCGGGGGAATGAGGCACGTGCAGAACTCGAGAAGGAAAGGATGGCTGCTGCATCTGCAGCTGAGGAAGCAATGGCCATGATCTTGCGTCTTCAGAACGAGAAGAGTTCTACTGAAATCCAAGCTAATCATTATCGCCAGATAGGAGAGCAGAAGCAGCAATATGATGAAGCAGTCATTCAGTCCTTGCAGTGGATTATAATGAAACACGAATCCGAGAGGAGTCAATTGGAAGAGCAACTGAGGCTGTGCAGGCAAACGTGCAATGGTCAGTCTGAGGAAGGTGATCCAAGTAAAAACCTGTTCGATTCCACCAACATGGAACATGATGGTCTCGAAGATGTCTTTGGTGCACATTGTAGGGAAAGCAGGGAACTCCATCATTATTCTCCTAGTGTTGTTGAATGGTTTGTTATTGTGAACACAAATTTATTTGCAAATATGTGTGGGATTCTGGTTAGAAACTTCAAGTCTTTGAGTCCACAGAAATCATTGGCAAGGAATGATTACTCTGTGGTAATCGAGCCATCTTGGAGGCAGCGCAACCCGCCGAGAGTTCCCAATCTCATTGGAGGTAGATTTGTTGATTCACAGTCATTTGCCTCCATTGATGTTTTAAACCCTGCAACACAGCAAGTTGCTTCTCAAGTACCTGTAACAACAAATGAGGAGTTCAAAGCTGCAGTATTTTCAGCAAAACGTGCCTTTCCATTGTGGCGATGTACACCTATTACTACTCGTCAGCGTATTATGTTTAAGCTCCAAGAGCTTATACGCAGAGACATTGATAAGATTGCTATGACCATTACAAGTGAACATGGCAAACCATTGAAGGATGCATATGATGATGTCTTACGTGGGCTAGAGGTGGTCGAACATGCTTGTGGACTTGCAACTCTGCAGATGGGAGATTTTATTTCCAATGTATCAAATGGAATTGATCGCTACAGCATTAGGGAGCCACTTGGTGTTTGTGCTGGGATTTGCCCTTTTGATTTTCCAGCCATGACTCCCTTATGGATGTTCACTACTGCAGTGACATGTGGTAATTCATTTATTCTAAAGCCATCAGAGATGGATCCAGGTGCATCTGTCATGCTTGCAGAGTTGGCAATGGAGGCTGGCTTGCCAAGTGGCGTGTTAAATATTGTTCATGGCACTAATGAAACTTTTGATGCTATTTGTGATGATGATGACATTAAAGCTATCTCATTTGTTGGAACAAAAGCAGCAGGTGCTTACATTTATTCCCGAGCATCGGCTAAGGGGAAACGTATTCAGTCCAATGTTGGAGAGAAAAATCATGCAATTGTCATGCCTGATGCAAGCATGGACGCTACTCTGAATGCTCTAGTTGCTGCTGGCTTTGGTGCTGCAGGACAAAGATGCACAGCACTTGCGACGGTTGTTTTCGTTGGAGGCATACATCTATGGGAAGACAAACTTGTGGAGCGTGCCAAAGCACTCAAGGTTGATGCCGGATCACAAGCAGATGTAGACATTGGTCCAGTGATTAGCAAGCAGGTAAAGGAACAGATATGCAGATTGATTCAAACAGGTGTTGAAAGTGGTGCAAAACTGGTGCTTGATGGTAGAAATATCTTGGTTCCCGGATTTGAGCATGGCAACTTCATTGGTCCCACCATCTTATCCAATGTCACAGCAGAGATGGAGTGTTATAAGGAAGAAATCTTTGGCCCAGTTCTTCTCTGTATGGAGGCTGACAACATTGAAGATGCCATAAACATCGTCAACAAAAATAAATATGGCAATGGAGCTTCTATATTTACAACATCCGGTGTGGCTGCAAGAAAATTCCAGACTGAGATTGAAGTAGGCCAGGTTGGCATAAATGTTCCCATCTCAGTTCCATTGCCCCATTCCTTGTTTACGAGCTCCCGGCCATCTTTTGCCGGTGATCTTAATTTTGATGGCAAAGCAGGGATTCAGTTTTACACCCAGATGAAGACGGTGACTCAACGATGGAGGGATTTACCTGACAGTGATGGACAAGCCTTGCTAATGTCAACTTGA

Protein Analysis

845

Amino Acids

93.27

Weight (kDa)

5.26

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Zein-binding PF04576 158 - 248 6.5e-28 Zein-binding
Aldedh PF00171 361 - 825 3.5e-131 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 701, 2181
AarI CACCTGC 1 cut(s) 1724
Acc36I ACCTGC 2 cut(s) 1724, 2014
AccI GTMKAC 1 cut(s) 1998
AciI CCGC 4 cut(s) 131, 261, 505, 1049
AclWI GGATC 4 cut(s) 782, 1574, 1587, 1990
AcoI YGGCCR 2 cut(s) 576, 2402
AcsI RAATTY 5 cut(s) 67, 200, 328, 928, 2315
AcuI CTGAAG 1 cut(s) 578
AcvI CACGTG 1 cut(s) 521
AdeI CACNNNGTG 1 cut(s) 1469
AfaI GTAC 3 cut(s) 116, 1152, 1225
AfiI CCNNNNNNNGG 2 cut(s) 693, 1759
AflIII ACRYGT 1 cut(s) 1541
AjnI CCWGG 2 cut(s) 1582, 2340
AjuI GAANNNNNNNTTGG 4 cut(s) 831, 863, 2178, 2210
AluBI AGCT 8 cut(s) 563, 626, 1181, 1261, 1270, 1706, 2279, 2397
AluI AGCT 8 cut(s) 563, 626, 1181, 1261, 1270, 1706, 2279, 2397
Alw21I GWGCWC 2 cut(s) 856, 2399
Alw26I GTCTC 3 cut(s) 156, 839, 1275
Alw44I GTGCAC 1 cut(s) 852
AlwI GGATC 4 cut(s) 782, 1574, 1587, 1990
Ama87I CYCGRG 2 cut(s) 530, 1752
AoxI GGCC 5 cut(s) 288, 576, 2197, 2338, 2402
ApaLI GTGCAC 1 cut(s) 852
ApoI RAATTY 5 cut(s) 67, 200, 328, 928, 2315
AspLEI GCGC 2 cut(s) 501, 1044
AspS9I GGNCC 3 cut(s) 2006, 2138, 2198
AsuC2I CCSGG 2 cut(s) 2112, 2401
AsuHPI GGTGA 6 cut(s) 330, 428, 499, 797, 2429, 2485
AvaI CYCGRG 2 cut(s) 530, 1752
AvaII GGWCC 2 cut(s) 2006, 2138
BaeGI GKGCMC 1 cut(s) 856
BalI TGGCCA 1 cut(s) 578
BamHI GGATCC 1 cut(s) 1579
BanII GRGCYC 1 cut(s) 2399
BbrPI CACGTG 1 cut(s) 521
BbsI GAAGAC 3 cut(s) 584, 1944, 2474
Bbv12I GWGCWC 2 cut(s) 856, 2399
BbvCI CCTCAGC 1 cut(s) 564
BceAI ACGGC 1 cut(s) 275
BciT130I CCWGG 2 cut(s) 1584, 2342
BcnI CCSGG 2 cut(s) 2112, 2401
BcoDI GTCTC 3 cut(s) 156, 839, 1275
BfaI CTAG 3 cut(s) 894, 1364, 1853
BfmI CTRYAG 6 cut(s) 558, 1182, 1400, 1447, 1533, 1875
BfoI RGCGCY 1 cut(s) 502
BfuAI ACCTGC 2 cut(s) 1724, 2014
BglI GCCNNNNNGGC 1 cut(s) 2346
Bme1390I CCNGG 4 cut(s) 1584, 2112, 2342, 2401
Bme18I GGWCC 2 cut(s) 2006, 2138
BmeT110I CYCGRG 2 cut(s) 530, 1752
BmgT120I GGNCC 3 cut(s) 2006, 2138, 2198
BmiI GGNNCC 4 cut(s) 1461, 1581, 2109, 2140
BmrFI CCNGG 4 cut(s) 1584, 2112, 2342, 2401
BmrI ACTGGG 1 cut(s) 2195
BmsI GCATC 9 cut(s) 563, 1327, 1598, 1666, 1766, 1813, 1877, 1966, 2227
BmuI ACTGGG 1 cut(s) 2195
BoxI GACNNNNGTC 1 cut(s) 2004
BpiI GAAGAC 3 cut(s) 584, 1944, 2474
Bpu10I CCTNAGC 2 cut(s) 564, 1764
BpuEI CTTGAG 3 cut(s) 74, 1131, 1952
BpuMI CCSGG 2 cut(s) 2112, 2401
BsaAI YACGTR 2 cut(s) 521, 1358
BsaI GGTCTC 1 cut(s) 839
BsaWI WCCGGW 1 cut(s) 2297
Bsc4I CCNNNNNNNGG 2 cut(s) 693, 1759
Bse118I RCCGGY 2 cut(s) 501, 2414
Bse1I ACTGG 3 cut(s) 2009, 2085, 2201
Bse3DI GCAATG 5 cut(s) 579, 772, 1620, 2278, 2372
BseBI CCWGG 2 cut(s) 1584, 2342
BseGI GGATG 6 cut(s) 93, 457, 549, 1342, 1527, 2294
BseLI CCNNNNNNNGG 2 cut(s) 693, 1759
BseMI GCAATG 5 cut(s) 579, 772, 1620, 2278, 2372
BseMII CTCAG 5 cut(s) 555, 734, 768, 2316, 2379
BseNI ACTGG 3 cut(s) 2009, 2085, 2201
BseRI GAGGAG 2 cut(s) 736, 1184
BseSI GKGCMC 1 cut(s) 856
BseYI CCCAGC 1 cut(s) 1478
BsgI GTGCAG 2 cut(s) 543, 772
Bsh1285I CGRYCG 1 cut(s) 121
BshFI GGCC 5 cut(s) 290, 578, 2199, 2340, 2404
BsiEI CGRYCG 1 cut(s) 121
BsiHKAI GWGCWC 2 cut(s) 856, 2399
BsiHKCI CYCGRG 2 cut(s) 530, 1752
BsiSI CCGG 6 cut(s) 502, 1980, 2112, 2298, 2401, 2415
BslFI GGGAC 1 cut(s) 2124
BslI CCNNNNNNNGG 2 cut(s) 693, 1759
BsmAI GTCTC 3 cut(s) 156, 839, 1275
BsmFI GGGAC 1 cut(s) 2124
BsmI GAATGC 1 cut(s) 1852
BsnI GGCC 5 cut(s) 290, 578, 2199, 2340, 2404
Bso31I GGTCTC 1 cut(s) 839
BsoBI CYCGRG 2 cut(s) 530, 1752
Bsp1286I GDGCHC 2 cut(s) 856, 2399
Bsp1407I TGTACA 1 cut(s) 1223
Bsp143I GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
BspACI CCGC 4 cut(s) 131, 261, 505, 1049
BspANI GGCC 5 cut(s) 290, 578, 2199, 2340, 2404
BspCNI CTCAG 5 cut(s) 556, 735, 769, 2317, 2378
BspHI TCATGA 1 cut(s) 268
BspLI GGNNCC 4 cut(s) 1461, 1581, 2109, 2140
BspMAI CTGCAG 5 cut(s) 562, 1186, 1404, 1537, 1879
BspMI ACCTGC 2 cut(s) 1724, 2014
BspPI GGATC 4 cut(s) 782, 1574, 1587, 1990
BspQI GCTCTTC 1 cut(s) 729
BspTNI GGTCTC 1 cut(s) 839
BsrDI GCAATG 5 cut(s) 579, 772, 1620, 2278, 2372
BsrFI RCCGGY 2 cut(s) 501, 2414
BsrGI TGTACA 1 cut(s) 1223
BsrI ACTGG 3 cut(s) 2009, 2085, 2201
BssAI RCCGGY 2 cut(s) 501, 2414
BssMI GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
Bst2UI CCWGG 2 cut(s) 1584, 2342
Bst4CI ACNGT 7 cut(s) 119, 336, 416, 1095, 1906, 2473, 2504
Bst6I CTCTTC 2 cut(s) 599, 729
BstAPI GCANNNNNTGC 2 cut(s) 1202, 1736
BstAUI TGTACA 1 cut(s) 1223
BstBAI YACGTR 2 cut(s) 521, 1358
BstC8I GCNNGC 9 cut(s) 503, 755, 1602, 1624, 1628, 1828, 1864, 1956, 2021
BstDEI CTNAG 6 cut(s) 564, 743, 777, 1764, 2325, 2365
BstF5I GGATG 6 cut(s) 93, 457, 549, 1342, 1527, 2294
BstH2I RGCGCY 1 cut(s) 502
BstHHI GCGC 2 cut(s) 501, 1044
BstKTI GATC 7 cut(s) 495, 585, 790, 1444, 1582, 1985, 2422
BstMAI GTCTC 3 cut(s) 156, 839, 1275
BstMBI GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
BstMCI CGRYCG 1 cut(s) 121
BstNI CCWGG 2 cut(s) 1584, 2342
BstNSI RCATGY 2 cut(s) 1382, 1545
BstPAI GACNNNNGTC 1 cut(s) 2004
BstSCI CCNGG 4 cut(s) 1582, 2110, 2340, 2399
BstSFI CTRYAG 6 cut(s) 558, 1182, 1400, 1447, 1533, 1875
BstSLI GKGCMC 1 cut(s) 856
BstV2I GAAGAC 3 cut(s) 584, 1944, 2474
BstX2I RGATCY 1 cut(s) 1579
BstXI CCANNNNNNTGG 1 cut(s) 820
BstYI RGATCY 1 cut(s) 1579
BsuRI GGCC 5 cut(s) 290, 578, 2199, 2340, 2404
BtgZI GCGATG 1 cut(s) 1234
BtsCI GGATG 6 cut(s) 93, 457, 549, 1342, 1527, 2294
BtsI GCAGTG 2 cut(s) 698, 1542
BtsIMutI CAGTG 4 cut(s) 698, 1542, 2016, 2509
BveI ACCTGC 2 cut(s) 1724, 2014
Cac8I GCNNGC 9 cut(s) 503, 755, 1602, 1624, 1628, 1828, 1864, 1956, 2021
CciI TCATGA 1 cut(s) 268
CfoI GCGC 2 cut(s) 501, 1044
Cfr10I RCCGGY 2 cut(s) 501, 2414
Cfr13I GGNCC 3 cut(s) 2006, 2138, 2198
CseI GACGC 2 cut(s) 578, 1844
Csp6I GTAC 3 cut(s) 115, 1151, 1224
CviQI GTAC 3 cut(s) 115, 1151, 1224
DdeI CTNAG 6 cut(s) 564, 743, 777, 1764, 2325, 2365
DpnI GATC 7 cut(s) 494, 584, 789, 1443, 1581, 1984, 2421
DpnII GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
DraI TTTAAA 1 cut(s) 1119
DraIII CACNNNGTG 1 cut(s) 1469
EaeI YGGCCR 2 cut(s) 576, 2402
Eam1104I CTCTTC 2 cut(s) 599, 729
EarI CTCTTC 2 cut(s) 599, 729
Ecl136II GAGCTC 1 cut(s) 2397
Eco24I GRGCYC 1 cut(s) 2399
Eco31I GGTCTC 1 cut(s) 839
Eco47I GGWCC 2 cut(s) 2006, 2138
Eco53kI GAGCTC 1 cut(s) 2397
Eco57I CTGAAG 1 cut(s) 578
Eco72I CACGTG 1 cut(s) 521
Eco88I CYCGRG 2 cut(s) 530, 1752
EcoICRI GAGCTC 1 cut(s) 2397
EcoRII CCWGG 2 cut(s) 1582, 2340
EcoT22I ATGCAT 1 cut(s) 1342
EcoT38I GRGCYC 1 cut(s) 2399
FalI AAGNNNNNCTT 2 cut(s) 1929, 1961
FaqI GGGAC 1 cut(s) 2124
FauI CCCGC 2 cut(s) 498, 1056
FauNDI CATATG 1 cut(s) 1342
FblI GTMKAC 1 cut(s) 1998
FokI GGATG 6 cut(s) 100, 464, 556, 1349, 1534, 2281
FriOI GRGCYC 1 cut(s) 2399
FspBI CTAG 3 cut(s) 894, 1364, 1853
GlaI GCGC 2 cut(s) 500, 1043
GsaI CCCAGC 1 cut(s) 1482
HaeII RGCGCY 1 cut(s) 502
HaeIII GGCC 5 cut(s) 290, 578, 2199, 2340, 2404
HapII CCGG 6 cut(s) 502, 1980, 2112, 2298, 2401, 2415
HgaI GACGC 2 cut(s) 578, 1844
HhaI GCGC 2 cut(s) 501, 1044
Hin6I GCGC 2 cut(s) 499, 1042
HinP1I GCGC 2 cut(s) 499, 1042
HincII GTYRAC 3 cut(s) 363, 2254, 2529
HindII GTYRAC 3 cut(s) 363, 2254, 2529
HpaI GTTAAC 1 cut(s) 363
HpaII CCGG 6 cut(s) 502, 1980, 2112, 2298, 2401, 2415
HphI GGTGA 6 cut(s) 330, 428, 499, 797, 2429, 2485
Hpy188I TCNGA 6 cut(s) 307, 597, 718, 778, 1573, 1845
Hpy188III TCNNGA 7 cut(s) 53, 269, 376, 532, 836, 1752, 2320
Hpy99I CGWCG 1 cut(s) 1906
HpyAV CCTTC 4 cut(s) 389, 529, 776, 1327
HpyCH4III ACNGT 7 cut(s) 119, 336, 416, 1095, 1906, 2473, 2504
HpyCH4IV ACGT 5 cut(s) 520, 761, 1201, 1357, 1774
HpyF3I CTNAG 6 cut(s) 564, 743, 777, 1764, 2325, 2365
HpySE526I ACGT 5 cut(s) 520, 761, 1201, 1357, 1774
HspAI GCGC 2 cut(s) 499, 1042
KroI GCCGGC 1 cut(s) 501
KroNI GCCGGC 1 cut(s) 503
KspAI GTTAAC 1 cut(s) 363
Kzo9I GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
LguI GCTCTTC 1 cut(s) 729
LmnI GCTCC 5 cut(s) 1266, 1459, 1951, 2276, 2402
LweI GCATC 9 cut(s) 563, 1327, 1598, 1666, 1766, 1813, 1877, 1966, 2227
MaeI CTAG 3 cut(s) 894, 1364, 1853
MaeII ACGT 5 cut(s) 520, 761, 1201, 1357, 1774
MaeIII GTNAC 7 cut(s) 209, 230, 336, 1156, 1537, 2158, 2473
MalI GATC 7 cut(s) 494, 584, 789, 1443, 1581, 1984, 2421
MboI GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
MfeI CAATTG 3 cut(s) 390, 728, 1809
MflI RGATCY 1 cut(s) 1579
MhlI GDGCHC 2 cut(s) 856, 2399
MlsI TGGCCA 1 cut(s) 578
MluNI TGGCCA 1 cut(s) 578
MlyI GAGTC 5 cut(s) 65, 733, 988, 1504, 2470
MmeI TCCRAC 3 cut(s) 1699, 1771, 1897
Mox20I TGGCCA 1 cut(s) 578
Mph1103I ATGCAT 1 cut(s) 1342
MreI CGCCGGCG 1 cut(s) 501
MroNI GCCGGC 1 cut(s) 501
MscI TGGCCA 1 cut(s) 578
MseI TTAA 7 cut(s) 198, 362, 1118, 1257, 1643, 1701, 2424
MslI CAYNNNNRTG 3 cut(s) 818, 1383, 2462
Msp20I TGGCCA 1 cut(s) 578
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 6 cut(s) 502, 1980, 2112, 2298, 2401, 2415
MspR9I CCNGG 4 cut(s) 1584, 2112, 2342, 2401
MunI CAATTG 3 cut(s) 390, 728, 1809
Mva1269I GAATGC 1 cut(s) 1852
MvaI CCWGG 2 cut(s) 1584, 2342
NaeI GCCGGC 1 cut(s) 503
NciI CCSGG 2 cut(s) 2112, 2401
NdeI CATATG 1 cut(s) 1342
NdeII GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
NgoMIV GCCGGC 1 cut(s) 501
NlaIV GGNNCC 4 cut(s) 1461, 1581, 2109, 2140
NmeAIII GCCGAG 1 cut(s) 1077
NmuCI GTSAC 6 cut(s) 209, 230, 336, 1537, 2158, 2473
NsiI ATGCAT 1 cut(s) 1342
NspI RCATGY 2 cut(s) 1382, 1545
PaeR7I CTCGAG 1 cut(s) 530
PagI TCATGA 1 cut(s) 268
PaqCI CACCTGC 1 cut(s) 1724
PciI ACATGT 1 cut(s) 1541
PciSI GCTCTTC 1 cut(s) 729
PctI GAATGC 1 cut(s) 1852
PdiI GCCGGC 1 cut(s) 503
PfeI GAWTC 7 cut(s) 78, 713, 809, 952, 1088, 2050, 2446
PfoI TCCNGGA 1 cut(s) 2110
PleI GAGTC 5 cut(s) 64, 732, 987, 1504, 2470
PmaCI CACGTG 1 cut(s) 521
PmlI CACGTG 1 cut(s) 521
PpsI GAGTC 5 cut(s) 64, 732, 987, 1504, 2470
Ppu21I YACGTR 2 cut(s) 521, 1358
PscI ACATGT 1 cut(s) 1541
PshAI GACNNNNGTC 1 cut(s) 2004
PsiI TTATAA 2 cut(s) 701, 2181
Psp124BI GAGCTC 1 cut(s) 2399
Psp6I CCWGG 2 cut(s) 1582, 2340
PspCI CACGTG 1 cut(s) 521
PspFI CCCAGC 1 cut(s) 1478
PspGI CCWGG 2 cut(s) 1582, 2340
PspN4I GGNNCC 4 cut(s) 1461, 1581, 2109, 2140
PspPI GGNCC 3 cut(s) 2006, 2138, 2198
PstI CTGCAG 5 cut(s) 562, 1186, 1404, 1537, 1879
PsuI RGATCY 1 cut(s) 1579
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 3 cut(s) 116, 1152, 1225
RsaNI GTAC 3 cut(s) 115, 1151, 1224
RseI CAYNNNNRTG 3 cut(s) 818, 1383, 2462
SacI GAGCTC 1 cut(s) 2399
SapI GCTCTTC 1 cut(s) 729
SaqAI TTAA 7 cut(s) 198, 362, 1118, 1257, 1643, 1701, 2424
Sau3AI GATC 7 cut(s) 492, 582, 787, 1441, 1579, 1982, 2419
Sau96I GGNCC 3 cut(s) 2006, 2138, 2198
SchI GAGTC 5 cut(s) 65, 733, 988, 1504, 2470
ScrFI CCNGG 4 cut(s) 1584, 2112, 2342, 2401
SduI GDGCHC 2 cut(s) 856, 2399
SfaNI GCATC 9 cut(s) 563, 1327, 1598, 1666, 1766, 1813, 1877, 1966, 2227
SfcI CTRYAG 6 cut(s) 558, 1182, 1400, 1447, 1533, 1875
Sfr274I CTCGAG 1 cut(s) 530
SgrAI CRCCGGYG 1 cut(s) 501
SinI GGWCC 2 cut(s) 2006, 2138
SlaI CTCGAG 1 cut(s) 530
SmiMI CAYNNNNRTG 3 cut(s) 818, 1383, 2462
SmlI CTYRAG 4 cut(s) 53, 530, 1146, 1967
SmoI CTYRAG 4 cut(s) 53, 530, 1146, 1967
SsiI CCGC 4 cut(s) 131, 261, 505, 1049
SspI AATATT 1 cut(s) 1648
SspMI CTAG 3 cut(s) 894, 1364, 1853
SstI GAGCTC 1 cut(s) 2399
StyD4I CCNGG 4 cut(s) 1582, 2110, 2340, 2399
TaaI ACNGT 7 cut(s) 119, 336, 416, 1095, 1906, 2473, 2504
TaiI ACGT 5 cut(s) 523, 764, 1204, 1360, 1777
TaqI TCGA 6 cut(s) 495, 531, 807, 837, 1023, 1374
TatI WGTACW 1 cut(s) 1223
TauI GCSGC 1 cut(s) 133
TfiI GAWTC 7 cut(s) 78, 713, 809, 952, 1088, 2050, 2446
Tru1I TTAA 7 cut(s) 198, 362, 1118, 1257, 1643, 1701, 2424
Tru9I TTAA 7 cut(s) 198, 362, 1118, 1257, 1643, 1701, 2424
TscAI CASTG 4 cut(s) 698, 1542, 2016, 2509
TseFI GTSAC 6 cut(s) 209, 230, 336, 1537, 2158, 2473
Tsp45I GTSAC 6 cut(s) 209, 230, 336, 1537, 2158, 2473
TspDTI ATGAA 9 cut(s) 285, 468, 684, 719, 1542, 1643, 1680, 2122, 2480
TspRI CASTG 4 cut(s) 698, 1542, 2016, 2509
VneI GTGCAC 1 cut(s) 852
VpaK11BI GGWCC 2 cut(s) 2006, 2138
XapI RAATTY 5 cut(s) 67, 200, 328, 928, 2315
XceI RCATGY 2 cut(s) 1382, 1545
XhoI CTCGAG 1 cut(s) 530
XmiI GTMKAC 1 cut(s) 1998
XspI CTAG 3 cut(s) 894, 1364, 1853
Zsp2I ATGCAT 1 cut(s) 1342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.