RH2CG223400

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_samantha
Unknown
OG0000503
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG223400.1

Sequence Viewer

Length: 3351 bp
ATGTGTTTCCTGTACTGTATTAATGATTGGGTTAATTCCTTAATCTCTGTTATTCTAAATTTGGGGTTGATTTTTCCCTTGAAATTTGATTGTGGGTTTGTTTCCACAGGTGTGTTTTTGTGTTGGAGGTGGGGTTTTGGGTCTCTGGTAGTGCAAGGTTTCACTGACGTAGTGGGATTTTCAATCAGATTCTTCTTACTGCCATCAATAATGGAAACTGAAAGTCAAATTGAGCTTACTATACAGAACAATATGCTTCCTCCACAAGCTGGAACATTTCAAGATCGTGAAGATCTCATCCAATATGTTCGTGATTTTGGTGCTAGTCAAGGATATGTGGTGACCATCAAAAAGTCAAGGAAAGACAGGAGAGTGATTTTAGGTTGTGATAGGGGAGGTGTTTATCGTAATAGGCGTAAAATTGATGAAAGCAAACGCAAAAGGAAGGCAAATTCACGCCTTATAAACTGTCCCTTTGAAGCCATTGGGAAAAGGGAAGATGATTTGTGGGTACTCACAATAAAGAATGGGGAGCATAATCATGAAGCATTAAGGGACATGTCAGAGCATCCTTATAGTCGTCGCTTTACTGAGGAAGAGGTCAGGCAAATCAAGCAAATGACCGAAGCTGGTATAAAACCACGTCAAGTTCTTAAGGCTCTCAAGCAAATGAATCCTGAACTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCAAAGATCCGTCAAGGAACTCTATCAGAGAAAAGTTTCAAGACGTGGAGACCTGACAGGTCCGCTTTGGTGAATACAAGTTCTGCTCCCAGTGGGGGGTCATTGATGCAAAGTAACCAGCCGTTGAAGGTTCCTAATTTCATAGGAGGAAAATTCGTTGATTCACAAGGGTGTTCAATCATTGACGTAGTAAATCCTGCAACACAAGAGATTGTTTCTCATGTTCCTTTAACTACCTATGAAGAGTTCAAAGCTGCAGTTAGTTCAGCCAAGCAAGCTTTTCCTTCATGGAAGAACACACCTATTACTATACGTCAAAGAATCCTGTTTAAGCTTCAGGAGCTCATCCGCAGAGATATTGATAAACTTGCTATGAATATCACCTTAGAGCAGGGTAAGACGTTGAAGGGTGCTGAGAGTGATGTGCTCCGTGGTATAGAGGTGGTCGAACATGCTTGTGGGATGGCAACTCTACAGATGGGTGAGTTTGTTCCTAATGCATCTTATGGTATTGATACATACAGCATTAGGGAACCACTTGGTGTTTGTGCCGGGATATGCCCCTTCAACTTTTCCTCAATGATTCCATTATGGATGTTCCCAGTTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAAAATCCAGCACTTGCTAAGGAGGCTGGTTTGCCCGATGGTGTGTTAAATATAGTCCATGGCACTCACGACATTGTTAATTATATCTGTGATGATGATGATATAAAGGCTGTTTCACTTGTTGGCTCGAGTACAGCTGGAATGCACATACATGCAAAGGCAGTTGCTAGGGGAAAGCGTGTTCAGTCCAATATAGGAGGAAAAAATCATGCCATCATCATGCCTGATGCTAGCATGGATGCAACCTTGAATGCTCTAGTCACGGCTGGTTTTGGTGCTGCAGGACAGAGGTGTATGGCTCTTAATACAGCTGTTTTTGTTGGAAACTCAATAACATGGGAGCGCGAACTAGTGGAACGTGCCAAAGCCCTGAAAGTCAATGTGGGAACAGATCCTAGTGCAGACGTTGGTCCAGTTATTACCAAAGAGGTGAAGGATTGCATATGCAGATTAGTCCAGAGCAGTGTCGAAAGCGGTGCTAGACTCGTTCTTGATGGGAGAAATGTTATGGTTCGAGGCTATGAGAATGGAAATTTTATTGGTCCTACTATCTTATGCGATGTTACAACCAATATGGATTGTTTTAAGGAAGAAATTTTTGGACCAGTTCTTCTGTGCATGCAGGCTGCCAGCCTAGAAGAAGCGATCACAATTATAAACAGAAACAGGTGTGGGAATGGAGCTTCCATATTCACAACATCTGGCATTGCTGCAAGGAAGTTCCAGAATGAAGTTGAGGCTGGGCTGGTTGGGATCAATGTTCCTGTTCCGGTTCCGTTGCCACTGTCCTCCTTTAACGGATCTAAGGCATCTTTTGGCAGCGATCTGAATATCTCTGGTAAGGCAGGAGTGCAATTTTACACCCAGATCAAAGCGGTTGCACAACAGTGGAAGGATTTACCTAGCTTAGAATCATCATTAGCCTTGCGTCCATCATATGAGACAAATATGGCAAGCAGAGGTGTCTCTTCTTCTTTGCCTTCAACATCTGAGAGAGATTCACCTAGTCATAGAATATCAGGAGCCACAAACTCAGAATCTGAGAGTGATTCACCAAGCAAGTTGCCAAGTCGTGGAGCTCCATTGTCCCTCCCTTCCACATCTGAGGCAGCTCTTCCAACCCAAGGAGCCTCATCTATGTCTCCAACCGCATATAGGGATTTTTCTAGTCGGGGCCTGTCCCTTGTCCTGCCAGCAACATCCGAGAGAGATCTGTCCGGTGTGGATATGTCACTAGCCATGCCTCGAGCAACAGAAGGAGATATACCAAAACAAGGTTTGACATTGACAACTTCACAATCATCAGAGAGAATGTATATGCCTCAAACTTCTCATTGGATGGAAACCTCAAGACCAACATCTCAAAGGACTGAAAATATTTCACCAAGTTCTGAGAGGCATCTTGCCTCAACATCTCAGAGGAATGACAAGAATGGCAACACGTCACTGTCATCTCAAAGGACTGGTACTTCTATGGCATTGACTTCCGAGAGCGTCTATGCCCCTGCCTCTCATGACAATATGGCTCCAATATCACTCCGAAGTGATGGTATGACTGGAACATCTCACAGGACGGATCCCACTCTACGTCCAACCTCTGAGAGAGCATACATGCTGGGAGTAACTCACCTGAATGACAATATGGGTCAAACATTTCAAAGGCCCGACACCATGTTTTCAACATCTGAGAGGATGTACATGCCCGCAAAATCTCATCAGCATGACCATATGGGTTCAACATCTCGGAGAACTGATATTCCTATGCATTCAACTTCGGAGCGGATGTTCATGTCCACAGCATCTCAAAGGAATGAGGAGTTGGCTGTTGCTTCTCAACCTGCCTCCGAGAGACTATATTTGTCTCCATTAGTTCCGAGAAATGCTGGTACGCCTCAGAAGATGTTTCCCCAAAACTCTCTAATTTTGAGTGAGGAGTTTCCCTCCCAAGGAGCATCACTGACTTTACCCACATCTCAGAGGATATAG

Protein Analysis

1116

Amino Acids

122.27

Weight (kDa)

8.58

Isoelectric Point (pI)

51.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 291 - 748 1.5e-126 Aldehyde dehydrogenase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 464, 2021
Acc36I ACCTGC 1 cut(s) 3211
AccB7I CCANNNNNTGG 2 cut(s) 269, 2438
AccBSI CCGCTC 1 cut(s) 3145
AccII CGCG 1 cut(s) 1710
AciI CCGC 7 cut(s) 780, 1066, 1839, 2240, 2514, 3069, 3145
AclWI GGATC 6 cut(s) 718, 1751, 2126, 2173, 2936, 2949
AcsI RAATTY 6 cut(s) 58, 83, 451, 869, 1897, 1959
AcuI CTGAAG 1 cut(s) 1037
AdeI CACNNNGTG 1 cut(s) 1259
AfaI GTAC 6 cut(s) 14, 513, 1498, 2833, 3062, 3253
AfiI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2438, 2489, 2520, 2639, 3311
AflII CTTAAG 2 cut(s) 653, 1352
AflIII ACRYGT 3 cut(s) 558, 1331, 2805
AhlI ACTAGT 1 cut(s) 1714
AjiI CACGTC 3 cut(s) 644, 762, 2808
AjuI GAANNNNNNNTTGG 4 cut(s) 1947, 1979, 3167, 3199
AleI CACNNNNGTG 3 cut(s) 110, 886, 2251
AloI GAACNNNNNNTCC 6 cut(s) 1530, 1562, 3106, 3134, 3138, 3166
Alw21I GWGCWC 3 cut(s) 1062, 1146, 2446
Alw26I GTCTC 7 cut(s) 147, 760, 2300, 2335, 2511, 3208, 3231
AlwI GGATC 6 cut(s) 718, 1751, 2126, 2173, 2936, 2949
AlwNI CAGNNNCTG 1 cut(s) 2405
Ama87I CYCGRG 2 cut(s) 1492, 2610
AoxI GGCC 2 cut(s) 2539, 3026
ApeKI GCWGC 6 cut(s) 971, 1643, 1991, 2075, 2184, 2474
ApoI RAATTY 6 cut(s) 58, 83, 451, 869, 1897, 1959
AseI ATTAAT 1 cut(s) 21
Asp700I GAANNNNTTC 1 cut(s) 752
AspLEI GCGC 1 cut(s) 1710
AspS9I GGNCC 6 cut(s) 777, 1775, 1907, 1967, 2539, 3027
AsuC2I CCSGG 1 cut(s) 1270
AsuHPI GGTGA 9 cut(s) 352, 799, 1090, 1211, 1807, 2358, 2409, 2739, 2984
AsuNHI GCTAGC 1 cut(s) 1595
AvaI CYCGRG 2 cut(s) 1492, 2610
AvaII GGWCC 4 cut(s) 777, 1775, 1907, 1967
BamHI GGATCC 1 cut(s) 2941
BanII GRGCYC 2 cut(s) 1062, 2446
BarI GAAGNNNNNNTAC 2 cut(s) 2613, 2645
Bbv12I GWGCWC 3 cut(s) 1062, 1146, 2446
BbvI GCAGC 6 cut(s) 958, 1630, 1978, 2062, 2196, 2486
BceAI ACGGC 2 cut(s) 823, 1644
BcgI CGANNNNNNTGC 2 cut(s) 1823, 1857
BcnI CCSGG 1 cut(s) 1270
BcoDI GTCTC 7 cut(s) 147, 760, 2300, 2335, 2511, 3208, 3231
BcuI ACTAGT 1 cut(s) 1714
BfmI CTRYAG 4 cut(s) 683, 972, 1190, 1644
BfrI CTTAAG 2 cut(s) 653, 1352
BfuAI ACCTGC 1 cut(s) 3211
BglII AGATCT 2 cut(s) 292, 2575
BisI GCNGC 6 cut(s) 972, 1644, 1992, 2076, 2185, 2475
BlsI GCNGC 6 cut(s) 973, 1645, 1993, 2077, 2186, 2476
Bme1390I CCNGG 1 cut(s) 1270
Bme18I GGWCC 4 cut(s) 777, 1775, 1907, 1967
BmeT110I CYCGRG 2 cut(s) 1492, 2610
BmgBI CACGTC 3 cut(s) 644, 762, 2808
BmgT120I GGNCC 6 cut(s) 777, 1775, 1907, 1967, 2539, 3027
BmiI GGNNCC 8 cut(s) 849, 1251, 2139, 2389, 2494, 2540, 2892, 2943
BmrFI CCNGG 1 cut(s) 1270
BmrI ACTGGG 2 cut(s) 801, 1313
BmsI GCATC 9 cut(s) 577, 813, 1226, 1582, 1594, 2183, 2773, 3173, 3326
BmtI GCTAGC 1 cut(s) 1599
BmuI ACTGGG 2 cut(s) 801, 1313
BoxI GACNNNNGTC 1 cut(s) 1773
BplI GAGNNNNNCTC 2 cut(s) 3290, 3322
Bpu10I CCTNAGC 1 cut(s) 1383
BpuEI CTTGAG 2 cut(s) 647, 2698
BpuMI CCSGG 1 cut(s) 1270
BsaI GGTCTC 2 cut(s) 147, 760
BsaJI CCNNGG 5 cut(s) 695, 1147, 1423, 2488, 3310
BsaWI WCCGGW 2 cut(s) 2134, 2582
BsaXI ACNNNNNCTCC 4 cut(s) 118, 148, 3134, 3164
Bsc4I CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2438, 2489, 2520, 2639, 3311
Bse1I ACTGG 6 cut(s) 807, 1319, 1778, 1970, 2833, 2926
Bse3DI GCAATG 1 cut(s) 2070
BseDI CCNNGG 5 cut(s) 695, 1147, 1423, 2488, 3310
BseLI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2438, 2489, 2520, 2639, 3311
BseMI GCAATG 1 cut(s) 2070
BseNI ACTGG 6 cut(s) 807, 1319, 1778, 1970, 2833, 2926
BseRI GAGGAG 2 cut(s) 3194, 3311
BseXI GCAGC 6 cut(s) 958, 1630, 1978, 2062, 2196, 2486
BseYI CCCAGC 2 cut(s) 2105, 2980
BsgI GTGCAG 1 cut(s) 1785
Bsh1236I CGCG 1 cut(s) 1710
BshFI GGCC 2 cut(s) 2541, 3028
BsiHKAI GWGCWC 3 cut(s) 1062, 1146, 2446
BsiHKCI CYCGRG 2 cut(s) 1492, 2610
BsiSI CCGG 3 cut(s) 1269, 2135, 2583
BslFI GGGAC 4 cut(s) 456, 569, 2437, 2530
BslI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2438, 2489, 2520, 2639, 3311
BsmAI GTCTC 7 cut(s) 147, 760, 2300, 2335, 2511, 3208, 3231
BsmFI GGGAC 4 cut(s) 456, 569, 2437, 2530
BsmI GAATGC 3 cut(s) 1512, 1621, 3130
BsnI GGCC 2 cut(s) 2541, 3028
Bso31I GGTCTC 2 cut(s) 147, 760
BsoBI CYCGRG 2 cut(s) 1492, 2610
Bsp1286I GDGCHC 3 cut(s) 1062, 1146, 2446
Bsp1407I TGTACA 1 cut(s) 3060
Bsp19I CCATGG 1 cut(s) 1423
BspACI CCGC 7 cut(s) 780, 1066, 1839, 2240, 2514, 3069, 3145
BspANI GGCC 2 cut(s) 2541, 3028
BspFNI CGCG 1 cut(s) 1710
BspHI TCATGA 2 cut(s) 541, 2878
BspLI GGNNCC 8 cut(s) 849, 1251, 2139, 2389, 2494, 2540, 2892, 2943
BspMAI CTGCAG 3 cut(s) 687, 976, 1648
BspMI ACCTGC 1 cut(s) 3211
BspOI GCTAGC 1 cut(s) 1599
BspPI GGATC 6 cut(s) 718, 1751, 2126, 2173, 2936, 2949
BspQI GCTCTTC 1 cut(s) 2484
BspTI CTTAAG 2 cut(s) 653, 1352
BspTNI GGTCTC 2 cut(s) 147, 760
BsrBI CCGCTC 1 cut(s) 3145
BsrDI GCAATG 1 cut(s) 2070
BsrGI TGTACA 1 cut(s) 3060
BsrI ACTGG 6 cut(s) 807, 1319, 1778, 1970, 2833, 2926
BssECI CCNNGG 5 cut(s) 695, 1147, 1423, 2488, 3310
BssT1I CCWWGG 4 cut(s) 695, 1423, 2488, 3310
Bst4CI ACNGT 5 cut(s) 17, 470, 2151, 2253, 2814
Bst6I CTCTTC 4 cut(s) 591, 954, 2338, 2484
BstAFI CTTAAG 2 cut(s) 653, 1352
BstAUI TGTACA 1 cut(s) 3060
BstC8I GCNNGC 8 cut(s) 993, 1597, 1985, 1989, 1996, 2320, 2559, 3069
BstDSI CCRYGG 2 cut(s) 1147, 1423
BstEII GGTNACC 1 cut(s) 340
BstFNI CGCG 1 cut(s) 1710
BstHHI GCGC 1 cut(s) 1710
BstMAI GTCTC 7 cut(s) 147, 760, 2300, 2335, 2511, 3208, 3231
BstMWI GCNNNNNNNGC 4 cut(s) 613, 992, 1057, 1388
BstNSI RCATGY 7 cut(s) 562, 1172, 1335, 1520, 1987, 2980, 3067
BstPAI GACNNNNGTC 1 cut(s) 1773
BstPI GGTNACC 1 cut(s) 340
BstSCI CCNGG 1 cut(s) 1268
BstSFI CTRYAG 4 cut(s) 683, 972, 1190, 1644
BstUI CGCG 1 cut(s) 1710
BstV1I GCAGC 6 cut(s) 958, 1630, 1978, 2062, 2196, 2486
BstX2I RGATCY 6 cut(s) 292, 723, 1756, 2165, 2575, 2941
BstYI RGATCY 6 cut(s) 292, 723, 1756, 2165, 2575, 2941
BsuRI GGCC 2 cut(s) 2541, 3028
BtgI CCRYGG 2 cut(s) 1147, 1423
BtgZI GCGATG 1 cut(s) 1938
BtrI CACGTC 3 cut(s) 644, 762, 2808
BtsI GCAGTG 1 cut(s) 1834
BtsIMutI CAGTG 7 cut(s) 162, 814, 1834, 2147, 2258, 2810, 3320
BveI ACCTGC 1 cut(s) 3211
Cac8I GCNNGC 8 cut(s) 993, 1597, 1985, 1989, 1996, 2320, 2559, 3069
CaiI CAGNNNCTG 1 cut(s) 2405
CciI TCATGA 2 cut(s) 541, 2878
CfoI GCGC 1 cut(s) 1710
Cfr13I GGNCC 6 cut(s) 777, 1775, 1907, 1967, 2539, 3027
CseI GACGC 2 cut(s) 2282, 2848
Csp6I GTAC 6 cut(s) 13, 512, 1497, 2832, 3061, 3252
CviQI GTAC 6 cut(s) 13, 512, 1497, 2832, 3061, 3252
DraIII CACNNNGTG 1 cut(s) 1259
Eam1104I CTCTTC 4 cut(s) 591, 954, 2338, 2484
EarI CTCTTC 4 cut(s) 591, 954, 2338, 2484
Ecl136II GAGCTC 2 cut(s) 1060, 2444
Eco130I CCWWGG 4 cut(s) 695, 1423, 2488, 3310
Eco24I GRGCYC 2 cut(s) 1062, 2446
Eco31I GGTCTC 2 cut(s) 147, 760
Eco47I GGWCC 4 cut(s) 777, 1775, 1907, 1967
Eco53kI GAGCTC 2 cut(s) 1060, 2444
Eco57I CTGAAG 1 cut(s) 1037
Eco88I CYCGRG 2 cut(s) 1492, 2610
Eco91I GGTNACC 1 cut(s) 340
EcoICRI GAGCTC 2 cut(s) 1060, 2444
EcoO109I RGGNCCY 1 cut(s) 2539
EcoO65I GGTNACC 1 cut(s) 340
EcoT14I CCWWGG 4 cut(s) 695, 1423, 2488, 3310
EcoT22I ATGCAT 2 cut(s) 1219, 3132
EcoT38I GRGCYC 2 cut(s) 1062, 2446
ErhI CCWWGG 4 cut(s) 695, 1423, 2488, 3310
FaqI GGGAC 4 cut(s) 456, 569, 2437, 2530
FauI CCCGC 1 cut(s) 3076
FauNDI CATATG 3 cut(s) 1808, 2302, 3093
Fnu4HI GCNGC 6 cut(s) 972, 1644, 1992, 2076, 2185, 2475
FriOI GRGCYC 2 cut(s) 1062, 2446
Fsp4HI GCNGC 6 cut(s) 972, 1644, 1992, 2076, 2185, 2475
GlaI GCGC 1 cut(s) 1709
GluI GCNGC 6 cut(s) 972, 1644, 1992, 2076, 2185, 2475
GsaI CCCAGC 2 cut(s) 2109, 2984
HaeIII GGCC 2 cut(s) 2541, 3028
HapII CCGG 3 cut(s) 1269, 2135, 2583
HgaI GACGC 2 cut(s) 2282, 2848
HhaI GCGC 1 cut(s) 1710
Hin6I GCGC 1 cut(s) 1708
HinP1I GCGC 1 cut(s) 1708
HincII GTYRAC 1 cut(s) 690
HindII GTYRAC 1 cut(s) 690
HindIII AAGCTT 2 cut(s) 993, 1049
HpaII CCGG 3 cut(s) 1269, 2135, 2583
HphI GGTGA 9 cut(s) 352, 799, 1090, 1211, 1807, 2358, 2409, 2739, 2984
Hpy166II GTNNAC 2 cut(s) 690, 3159
Hpy8I GTNNAC 2 cut(s) 690, 3159
Hpy99I CGWCG 1 cut(s) 585
HpyCH4III ACNGT 5 cut(s) 17, 470, 2151, 2253, 2814
HpyF10VI GCNNNNNNNGC 4 cut(s) 613, 992, 1057, 1388
HspAI GCGC 1 cut(s) 1708
LguI GCTCTTC 1 cut(s) 2484
Lsp1109I GCAGC 6 cut(s) 958, 1630, 1978, 2062, 2196, 2486
LweI GCATC 9 cut(s) 577, 813, 1226, 1582, 1594, 2183, 2773, 3173, 3326
MaeIII GTNAC 8 cut(s) 340, 830, 1327, 1624, 1927, 2595, 2808, 2986
MbiI CCGCTC 1 cut(s) 3145
MflI RGATCY 6 cut(s) 292, 723, 1756, 2165, 2575, 2941
MhlI GDGCHC 3 cut(s) 1062, 1146, 2446
MlyI GAGTC 1 cut(s) 1842
MmeI TCCRAC 5 cut(s) 104, 1666, 2507, 2534, 2981
Mph1103I ATGCAT 2 cut(s) 1219, 3132
MroXI GAANNNNTTC 1 cut(s) 752
MslI CAYNNNNRTG 9 cut(s) 110, 540, 886, 1173, 1515, 1583, 2251, 2997, 3084
MspA1I CMGCKG 2 cut(s) 1502, 1676
MspCI CTTAAG 2 cut(s) 653, 1352
MspI CCGG 3 cut(s) 1269, 2135, 2583
MspR9I CCNGG 1 cut(s) 1270
Mva1269I GAATGC 3 cut(s) 1512, 1621, 3130
MvnI CGCG 1 cut(s) 1710
MwoI GCNNNNNNNGC 4 cut(s) 613, 992, 1057, 1388
NciI CCSGG 1 cut(s) 1270
NcoI CCATGG 1 cut(s) 1423
NdeI CATATG 3 cut(s) 1808, 2302, 3093
NheI GCTAGC 1 cut(s) 1595
NlaIV GGNNCC 8 cut(s) 849, 1251, 2139, 2389, 2494, 2540, 2892, 2943
NmuCI GTSAC 4 cut(s) 340, 1624, 2595, 2808
NsiI ATGCAT 2 cut(s) 1219, 3132
NspI RCATGY 7 cut(s) 562, 1172, 1335, 1520, 1987, 2980, 3067
OliI CACNNNNGTG 3 cut(s) 110, 886, 2251
PaeI GCATGC 1 cut(s) 1987
PaeR7I CTCGAG 2 cut(s) 1492, 2610
PagI TCATGA 2 cut(s) 541, 2878
PciI ACATGT 2 cut(s) 558, 1331
PciSI GCTCTTC 1 cut(s) 2484
PcsI WCGNNNNNNNCGW 1 cut(s) 412
PctI GAATGC 3 cut(s) 1512, 1621, 3130
PdmI GAANNNNTTC 1 cut(s) 752
PfeI GAWTC 9 cut(s) 189, 673, 878, 1038, 1300, 2276, 2363, 2402, 2414
PflMI CCANNNNNTGG 2 cut(s) 269, 2438
PkrI GCNGC 6 cut(s) 973, 1645, 1993, 2077, 2186, 2476
PleI GAGTC 1 cut(s) 1842
PpsI GAGTC 1 cut(s) 1842
PscI ACATGT 2 cut(s) 558, 1331
PshAI GACNNNNGTC 1 cut(s) 1773
PshBI ATTAAT 1 cut(s) 21
PsiI TTATAA 2 cut(s) 464, 2021
Psp124BI GAGCTC 2 cut(s) 1062, 2446
PspEI GGTNACC 1 cut(s) 340
PspFI CCCAGC 2 cut(s) 2105, 2980
PspN4I GGNNCC 8 cut(s) 849, 1251, 2139, 2389, 2494, 2540, 2892, 2943
PspPI GGNCC 6 cut(s) 777, 1775, 1907, 1967, 2539, 3027
PspXI VCTCGAGB 2 cut(s) 1492, 2610
PstI CTGCAG 3 cut(s) 687, 976, 1648
PstNI CAGNNNCTG 1 cut(s) 2405
PsuI RGATCY 6 cut(s) 292, 723, 1756, 2165, 2575, 2941
PvuII CAGCTG 2 cut(s) 1502, 1676
RsaI GTAC 6 cut(s) 14, 513, 1498, 2833, 3062, 3253
RsaNI GTAC 6 cut(s) 13, 512, 1497, 2832, 3061, 3252
RseI CAYNNNNRTG 9 cut(s) 110, 540, 886, 1173, 1515, 1583, 2251, 2997, 3084
SacI GAGCTC 2 cut(s) 1062, 2446
SapI GCTCTTC 1 cut(s) 2484
SatI GCNGC 6 cut(s) 972, 1644, 1992, 2076, 2185, 2475
Sau96I GGNCC 6 cut(s) 777, 1775, 1907, 1967, 2539, 3027
SchI GAGTC 1 cut(s) 1842
ScrFI CCNGG 1 cut(s) 1270
SduI GDGCHC 3 cut(s) 1062, 1146, 2446
SfaNI GCATC 9 cut(s) 577, 813, 1226, 1582, 1594, 2183, 2773, 3173, 3326
SfcI CTRYAG 4 cut(s) 683, 972, 1190, 1644
Sfr274I CTCGAG 2 cut(s) 1492, 2610
SinI GGWCC 4 cut(s) 777, 1775, 1907, 1967
SlaI CTCGAG 2 cut(s) 1492, 2610
SmiMI CAYNNNNRTG 9 cut(s) 110, 540, 886, 1173, 1515, 1583, 2251, 2997, 3084
SmlI CTYRAG 6 cut(s) 653, 662, 1352, 1492, 2610, 2713
SmoI CTYRAG 6 cut(s) 653, 662, 1352, 1492, 2610, 2713
SpeI ACTAGT 1 cut(s) 1714
SphI GCATGC 1 cut(s) 1987
SsiI CCGC 7 cut(s) 780, 1066, 1839, 2240, 2514, 3069, 3145
SspI AATATT 1 cut(s) 2743
SstI GAGCTC 2 cut(s) 1062, 2446
StyD4I CCNGG 1 cut(s) 1268
StyI CCWWGG 4 cut(s) 695, 1423, 2488, 3310
TaaI ACNGT 5 cut(s) 17, 470, 2151, 2253, 2814
TaqI TCGA 5 cut(s) 1164, 1493, 1833, 1879, 2611
TaqII GACCGA 1 cut(s) 638
TatI WGTACW 3 cut(s) 12, 1496, 3060
TfiI GAWTC 9 cut(s) 189, 673, 878, 1038, 1300, 2276, 2363, 2402, 2414
TscAI CASTG 7 cut(s) 169, 814, 1834, 2154, 2258, 2817, 3327
TseFI GTSAC 4 cut(s) 340, 1624, 2595, 2808
TseI GCWGC 6 cut(s) 971, 1643, 1991, 2075, 2184, 2474
Tsp45I GTSAC 4 cut(s) 340, 1624, 2595, 2808
TspDTI ATGAA 9 cut(s) 441, 558, 686, 847, 972, 993, 1106, 2109, 3142
TspGWI ACGGA 5 cut(s) 716, 1136, 2130, 2178, 2954
TspRI CASTG 7 cut(s) 169, 814, 1834, 2154, 2258, 2817, 3327
Van91I CCANNNNNTGG 2 cut(s) 269, 2438
Vha464I CTTAAG 2 cut(s) 653, 1352
VpaK11BI GGWCC 4 cut(s) 777, 1775, 1907, 1967
VspI ATTAAT 1 cut(s) 21
XapI RAATTY 6 cut(s) 58, 83, 451, 869, 1897, 1959
XceI RCATGY 7 cut(s) 562, 1172, 1335, 1520, 1987, 2980, 3067
XhoI CTCGAG 2 cut(s) 1492, 2610
XmnI GAANNNNTTC 1 cut(s) 752
Zsp2I ATGCAT 2 cut(s) 1219, 3132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.