Rmu_sc0000918.1_g000033

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000918.1
OG0000503
Physical Location & Seq
Reverse (-)
157176 .. 172475
15300 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000918.1_g000033.1.cds

Sequence Viewer

Length: 2964 bp
atggactttgtgtttggggttttgttgtacggtcgtttctcgccgctttttgtgtcagggttgtctctcatgttcgggtttggtttgttataccattacaactatttgattaaattcctatgtgacaatagagcgaaagccagtgactttagtaatgggttttgctcaaaatgcggttctcatgaagtttgtccttcaaaggccgtgtcttccaaatctgaaccactgaaatcattggagaatttacagtcatcaaatgcagatggttttctgttaaccaaaattgtaaaggcagaagatgcaattgaaggaaaagatgataatgagggtggtaatgatgatgagaatgtttgttgtaaggaggatgaagtgtttgatgttctgtcattgaggaaattggtaaagattgagcgccggcgggggaatgaggcacgtgcagaactcgagaaggaaaggatggctgctgcatctgcagctgaggaagcaatggccatgatcttgcgtcttcagaacgagaagagttctactgaaatccaggctagtcattatcgccagatagctgagcagaagcagcaatatgatgaagcagtgattcagtccttgcagtggattataatgaaacacgaatctgagaggagtcaattggaagagcaactaaggctgtgcaggcaaatgtgcaatggtcagtctgagaaaggtgatccaagtaaaaacctgttcgattccaccaacatggaagatgatggcctcgaagatgtctttggtgcacattgtagcaatctgagattaagagcatgcatcactactgcagaggttttgtcttccagtaatatgaggatggaccttgagagttgcatgggattaaatgacccacgacagatgcttccacctccacctggatcttttgtggatcgtgacgaactcattcaacatgttggggactttgctgtgtcacaaggttatgttgtaactatcaagcagtctaagagggatagagtagttatccttggttgtgacagaggaggtgtttaccgtaataggcagaaacaggttgatgagtcctgtagtgaacagaacaaaaggagaaaagcaggatctcggctgacaaattgtccttttgaagctgtggggaaaaaaggtgatggcttgtgggtacttactgtaaaaaatggaacccacaaccatgaacccttgaaggatatttcagaacatccctctgctcgtcgtttcaacgagagagaagttttgatgattaaagagatgacagaatctggtttaaaacctcgccaaattctaaagagattaagacaaagcaatccagatcttttgtcaactccgaagcatgtttataatgttaaagcaaagcttcgccaaggaaacacgggagttagaaacttcaagtctttgagtccacagaaatcattgggaaggaacgattattctgtggtcatcgagccatcttggaggcagcgcaaccccccgagagttcccaatctcattggaggtagatttgttgattcacagtcatttgcctccattgatgttttaaaccctgcaacacagcaagttgcttctcaagtacctttaacaacaaatgaggagttcaaagctgcagtatttgcagcaaaacgtgcctttccattgtggcgatgtacacctattactactcgtcagcgtattatgttcaagttccaagagcttatacgcagagacattgataagattgctgtgaccattacaagtgaacatggcaaagcattgaaggatgcatatgatgatgtctcacgtgggctagaggtggtcgaacatgcttgtggacttgcaactctgcagatgggagattttatttccaatgtatcaaatggaattgatagctacagcattagggagccacttggtgtttgtgctgggatttgcccttttgattttccagccatgattcccttatggatgttcactactgcagtgacatgtggtaattcatttattctaaagccatcagagatggatccaggtgcatctgtgatgcttgcagagttggcaatggaggctggcttgccaagtggcgtgttaaatattgttcatggcactaatgaaacttttgatgcgatttgtgatgatgatgacattaaagctatctcatttgttggaacaaaagcagcaggtgcttacatttattcccgagcatcggctaaggggaaacgtattcagtcgaatgttggagtgaaaaatcatgctattgtcatgcctgatgcaaccatggacactactctgaatgctctagttgctgctggctttggtgctgcaggacaaaggtgcacagcacttacaacagttgtttttgttggaggcatacatctgtgggaagacaaacttgtagagcgtgccaaagcactcaaggttgatgccggatcacaagcagatgtagacattggtccagtgattagcaagcaggtaaaggaacagatatgcagattgattcaaacaggtgttgaaagtggtgcaaaactggtgcttgatggtagaaatatcttggttcccggatttgagcatggcaacttcattggtccctccatcttatcctatgtcacagcagagatggagtgttataaggaagaaatctttggcccagttcttctctgtatggaggctgacaacattgaagatgccataaacatcgtcaacaaaaataaatatggcaatggagcttctatctttacaaagtctggtctggctgcaagaaaattccagactgagattgaagtgggccaggttggcataaatgttcccatctcagttccattgccctattccttgtttacgagctcccggccatcttttgccggtgatcttaattttgatggcaaagcagggattcagttttacacccagatgaagactgtgactcaacaatggaaggatttacctgacagtgatggacaagccttgctaatgtctacttga

Protein Analysis

987

Amino Acids

108.95

Weight (kDa)

6.23

Isoelectric Point (pI)

45.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 614, 1350, 2610
AarI CACCTGC 1 cut(s) 2153
Acc36I ACCTGC 2 cut(s) 2153, 2443
AccI GTMKAC 2 cut(s) 2427, 2957
AciI CCGC 3 cut(s) 44, 174, 418
AclWI GGATC 7 cut(s) 695, 907, 918, 1102, 2003, 2016, 2419
AcoI YGGCCR 2 cut(s) 489, 2831
AcsI RAATTY 4 cut(s) 113, 241, 1290, 2744
AcuI CTGAAG 1 cut(s) 491
AcvI CACGTG 2 cut(s) 434, 1787
AdeI CACNNNGTG 1 cut(s) 1898
AfaI GTAC 4 cut(s) 29, 1155, 1581, 1654
AfiI CCNNNNNNNGG 3 cut(s) 606, 896, 2188
AflIII ACRYGT 2 cut(s) 931, 1970
AhdI GACNNNNNGTC 1 cut(s) 1110
AjnI CCWGG 4 cut(s) 534, 895, 2011, 2769
AjuI GAANNNNNNNTTGG 4 cut(s) 744, 776, 2607, 2639
Alw21I GWGCWC 3 cut(s) 769, 2321, 2828
Alw26I GTCTC 3 cut(s) 69, 1704, 1786
Alw44I GTGCAC 2 cut(s) 765, 2317
AlwI GGATC 7 cut(s) 695, 907, 918, 1102, 2003, 2016, 2419
AlwNI CAGNNNCTG 1 cut(s) 1271
Ama87I CYCGRG 3 cut(s) 443, 1480, 2181
AoxI GGCC 6 cut(s) 201, 489, 745, 2626, 2767, 2831
ApaLI GTGCAC 2 cut(s) 765, 2317
ApoI RAATTY 4 cut(s) 113, 241, 1290, 2744
ArsI GACNNNNNNTTYG 3 cut(s) 28, 191, 223
Asp700I GAANNNNTTC 1 cut(s) 924
AspLEI GCGC 2 cut(s) 414, 1473
AspS9I GGNCC 5 cut(s) 841, 2435, 2567, 2627, 2767
AsuC2I CCSGG 2 cut(s) 2541, 2830
AsuHPI GGTGA 3 cut(s) 710, 1151, 2858
AvaI CYCGRG 3 cut(s) 443, 1480, 2181
AvaII GGWCC 3 cut(s) 841, 2435, 2567
BaeGI GKGCMC 2 cut(s) 769, 2321
BalI TGGCCA 1 cut(s) 491
BamHI GGATCC 1 cut(s) 2008
BanII GRGCYC 1 cut(s) 2828
BbrPI CACGTG 2 cut(s) 434, 1787
BbsI GAAGAC 5 cut(s) 201, 497, 813, 2373, 2903
Bbv12I GWGCWC 3 cut(s) 769, 2321, 2828
BbvCI CCTCAGC 1 cut(s) 477
BceAI ACGGC 1 cut(s) 188
BciT130I CCWGG 4 cut(s) 536, 897, 2013, 2771
BcnI CCSGG 2 cut(s) 2541, 2830
BcoDI GTCTC 3 cut(s) 69, 1704, 1786
BfaI CTAG 3 cut(s) 540, 1793, 2282
BfmI CTRYAG 8 cut(s) 471, 807, 1063, 1611, 1829, 1876, 1962, 2304
BfoI RGCGCY 1 cut(s) 415
BfuAI ACCTGC 2 cut(s) 2153, 2443
BglI GCCNNNNNGGC 1 cut(s) 2775
BglII AGATCT 1 cut(s) 1321
BlpI GCTNAGC 1 cut(s) 561
Bme1390I CCNGG 6 cut(s) 536, 897, 2013, 2541, 2771, 2830
Bme18I GGWCC 3 cut(s) 841, 2435, 2567
BmeRI GACNNNNNGTC 1 cut(s) 1110
BmeT110I CYCGRG 3 cut(s) 443, 1480, 2181
BmgT120I GGNCC 5 cut(s) 841, 2435, 2567, 2627, 2767
BmiI GGNNCC 5 cut(s) 1174, 1890, 2010, 2538, 2569
BmrFI CCNGG 6 cut(s) 536, 897, 2013, 2541, 2771, 2830
BmrI ACTGGG 1 cut(s) 2624
BmuI ACTGGG 1 cut(s) 2624
BoxI GACNNNNGTC 1 cut(s) 2433
BpiI GAAGAC 5 cut(s) 201, 497, 813, 2373, 2903
Bpu10I CCTNAGC 2 cut(s) 477, 2193
Bpu1102I GCTNAGC 1 cut(s) 561
BpuEI CTTGAG 3 cut(s) 866, 1560, 2381
BpuMI CCSGG 2 cut(s) 2541, 2830
BsaAI YACGTR 2 cut(s) 434, 1787
BsaJI CCNNGG 3 cut(s) 1006, 1372, 2259
Bsc4I CCNNNNNNNGG 3 cut(s) 606, 896, 2188
Bse118I RCCGGY 2 cut(s) 414, 2843
Bse1I ACTGG 5 cut(s) 141, 825, 2438, 2514, 2630
Bse3DI GCAATG 5 cut(s) 492, 685, 2049, 2707, 2801
BseBI CCWGG 4 cut(s) 536, 897, 2013, 2771
BseDI CCNNGG 3 cut(s) 1006, 1372, 2259
BseGI GGATG 6 cut(s) 370, 462, 843, 1210, 1771, 1956
BseLI CCNNNNNNNGG 3 cut(s) 606, 896, 2188
BseMI GCAATG 5 cut(s) 492, 685, 2049, 2707, 2801
BseMII CTCAG 7 cut(s) 468, 552, 621, 681, 773, 2745, 2808
BseNI ACTGG 5 cut(s) 141, 825, 2438, 2514, 2630
BseRI GAGGAG 3 cut(s) 649, 1035, 1613
BseSI GKGCMC 2 cut(s) 769, 2321
BseYI CCCAGC 1 cut(s) 1907
BsgI GTGCAG 2 cut(s) 456, 685
Bsh1285I CGRYCG 1 cut(s) 34
BshFI GGCC 6 cut(s) 203, 491, 747, 2628, 2769, 2833
BsiEI CGRYCG 1 cut(s) 34
BsiHKAI GWGCWC 3 cut(s) 769, 2321, 2828
BsiHKCI CYCGRG 3 cut(s) 443, 1480, 2181
BsiSI CCGG 5 cut(s) 415, 2409, 2541, 2830, 2844
BslFI GGGAC 2 cut(s) 953, 2553
BslI CCNNNNNNNGG 3 cut(s) 606, 896, 2188
BsmAI GTCTC 3 cut(s) 69, 1704, 1786
BsmFI GGGAC 2 cut(s) 953, 2553
BsmI GAATGC 1 cut(s) 2281
BsnI GGCC 6 cut(s) 203, 491, 747, 2628, 2769, 2833
BsoBI CYCGRG 3 cut(s) 443, 1480, 2181
Bsp1286I GDGCHC 3 cut(s) 769, 2321, 2828
Bsp1407I TGTACA 1 cut(s) 1652
Bsp143I GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
Bsp1720I GCTNAGC 1 cut(s) 561
Bsp19I CCATGG 1 cut(s) 2259
BspACI CCGC 3 cut(s) 44, 174, 418
BspANI GGCC 6 cut(s) 203, 491, 747, 2628, 2769, 2833
BspCNI CTCAG 7 cut(s) 469, 553, 622, 682, 774, 2746, 2807
BspHI TCATGA 1 cut(s) 181
BspLI GGNNCC 5 cut(s) 1174, 1890, 2010, 2538, 2569
BspMAI CTGCAG 6 cut(s) 475, 811, 1615, 1833, 1966, 2308
BspMI ACCTGC 2 cut(s) 2153, 2443
BspPI GGATC 7 cut(s) 695, 907, 918, 1102, 2003, 2016, 2419
BspQI GCTCTTC 1 cut(s) 642
BsrDI GCAATG 5 cut(s) 492, 685, 2049, 2707, 2801
BsrFI RCCGGY 2 cut(s) 414, 2843
BsrGI TGTACA 1 cut(s) 1652
BsrI ACTGG 5 cut(s) 141, 825, 2438, 2514, 2630
BssAI RCCGGY 2 cut(s) 414, 2843
BssECI CCNNGG 3 cut(s) 1006, 1372, 2259
BssMI GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
BssT1I CCWWGG 3 cut(s) 1006, 1372, 2259
Bst2UI CCWGG 4 cut(s) 536, 897, 2013, 2771
Bst4CI ACNGT 8 cut(s) 32, 249, 1034, 1162, 1524, 2335, 2902, 2933
Bst6I CTCTTC 2 cut(s) 512, 642
BstAPI GCANNNNNTGC 4 cut(s) 299, 1619, 1631, 2165
BstAUI TGTACA 1 cut(s) 1652
BstBAI YACGTR 2 cut(s) 434, 1787
BstC8I GCNNGC 9 cut(s) 416, 668, 796, 2031, 2053, 2057, 2293, 2385, 2450
BstDSI CCRYGG 1 cut(s) 2259
BstF5I GGATG 6 cut(s) 370, 462, 843, 1210, 1771, 1956
BstH2I RGCGCY 1 cut(s) 415
BstHHI GCGC 2 cut(s) 414, 1473
BstKTI GATC 9 cut(s) 498, 703, 902, 913, 1097, 1324, 2011, 2414, 2851
BstMAI GTCTC 3 cut(s) 69, 1704, 1786
BstMBI GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
BstMCI CGRYCG 1 cut(s) 34
BstNI CCWGG 4 cut(s) 536, 897, 2013, 2771
BstNSI RCATGY 5 cut(s) 798, 935, 1346, 1811, 1974
BstPAI GACNNNNGTC 1 cut(s) 2433
BstSCI CCNGG 6 cut(s) 534, 895, 2011, 2539, 2769, 2828
BstSFI CTRYAG 8 cut(s) 471, 807, 1063, 1611, 1829, 1876, 1962, 2304
BstSLI GKGCMC 2 cut(s) 769, 2321
BstV2I GAAGAC 5 cut(s) 201, 497, 813, 2373, 2903
BstX2I RGATCY 4 cut(s) 899, 1094, 1321, 2008
BstXI CCANNNNNNTGG 1 cut(s) 733
BstYI RGATCY 4 cut(s) 899, 1094, 1321, 2008
BsuRI GGCC 6 cut(s) 203, 491, 747, 2628, 2769, 2833
BtgI CCRYGG 1 cut(s) 2259
BtgZI GCGATG 1 cut(s) 1663
BtsCI GGATG 6 cut(s) 370, 462, 843, 1210, 1771, 1956
BtsI GCAGTG 3 cut(s) 594, 611, 1971
BtsIMutI CAGTG 7 cut(s) 148, 224, 594, 611, 1971, 2445, 2938
BveI ACCTGC 2 cut(s) 2153, 2443
Cac8I GCNNGC 9 cut(s) 416, 668, 796, 2031, 2053, 2057, 2293, 2385, 2450
CaiI CAGNNNCTG 1 cut(s) 1271
CciI TCATGA 1 cut(s) 181
CfoI GCGC 2 cut(s) 414, 1473
Cfr10I RCCGGY 2 cut(s) 414, 2843
Cfr13I GGNCC 5 cut(s) 841, 2435, 2567, 2627, 2767
CseI GACGC 1 cut(s) 491
Csp6I GTAC 4 cut(s) 28, 1154, 1580, 1653
CviQI GTAC 4 cut(s) 28, 1154, 1580, 1653
DpnI GATC 9 cut(s) 497, 702, 901, 912, 1096, 1323, 2010, 2413, 2850
DpnII GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
DraI TTTAAA 2 cut(s) 1278, 1548
DraIII CACNNNGTG 1 cut(s) 1898
DriI GACNNNNNGTC 1 cut(s) 1110
EaeI YGGCCR 2 cut(s) 489, 2831
Eam1104I CTCTTC 2 cut(s) 512, 642
Eam1105I GACNNNNNGTC 1 cut(s) 1110
EarI CTCTTC 2 cut(s) 512, 642
Ecl136II GAGCTC 1 cut(s) 2826
Eco130I CCWWGG 3 cut(s) 1006, 1372, 2259
Eco24I GRGCYC 1 cut(s) 2828
Eco47I GGWCC 3 cut(s) 841, 2435, 2567
Eco53kI GAGCTC 1 cut(s) 2826
Eco57I CTGAAG 1 cut(s) 491
Eco72I CACGTG 2 cut(s) 434, 1787
Eco88I CYCGRG 3 cut(s) 443, 1480, 2181
EcoICRI GAGCTC 1 cut(s) 2826
EcoRII CCWGG 4 cut(s) 534, 895, 2011, 2769
EcoT14I CCWWGG 3 cut(s) 1006, 1372, 2259
EcoT22I ATGCAT 2 cut(s) 800, 1771
EcoT38I GRGCYC 1 cut(s) 2828
ErhI CCWWGG 3 cut(s) 1006, 1372, 2259
FalI AAGNNNNNCTT 4 cut(s) 1350, 1382, 2358, 2390
FaqI GGGAC 2 cut(s) 953, 2553
FauI CCCGC 1 cut(s) 411
FauNDI CATATG 1 cut(s) 1771
FblI GTMKAC 2 cut(s) 2427, 2957
FokI GGATG 6 cut(s) 377, 469, 850, 1197, 1778, 1963
FriOI GRGCYC 1 cut(s) 2828
FspBI CTAG 3 cut(s) 540, 1793, 2282
GlaI GCGC 2 cut(s) 413, 1472
GsaI CCCAGC 1 cut(s) 1911
HaeII RGCGCY 1 cut(s) 415
HaeIII GGCC 6 cut(s) 203, 491, 747, 2628, 2769, 2833
HapII CCGG 5 cut(s) 415, 2409, 2541, 2830, 2844
HgaI GACGC 1 cut(s) 491
HhaI GCGC 2 cut(s) 414, 1473
Hin6I GCGC 2 cut(s) 412, 1471
HinP1I GCGC 2 cut(s) 412, 1471
HincII GTYRAC 3 cut(s) 276, 1332, 2683
HindII GTYRAC 3 cut(s) 276, 1332, 2683
HindIII AAGCTT 1 cut(s) 1364
HpaI GTTAAC 1 cut(s) 276
HpaII CCGG 5 cut(s) 415, 2409, 2541, 2830, 2844
HphI GGTGA 3 cut(s) 710, 1151, 2858
Hpy188I TCNGA 9 cut(s) 220, 510, 631, 691, 783, 1207, 1338, 2002, 2274
Hpy188III TCNNGA 6 cut(s) 182, 445, 914, 1319, 2181, 2749
Hpy99I CGWCG 1 cut(s) 1227
HpyAV CCTTC 7 cut(s) 204, 302, 442, 1189, 1422, 1756, 2911
HpyCH4III ACNGT 8 cut(s) 32, 249, 1034, 1162, 1524, 2335, 2902, 2933
HpyCH4IV ACGT 4 cut(s) 433, 1630, 1786, 2203
HpySE526I ACGT 4 cut(s) 433, 1630, 1786, 2203
HspAI GCGC 2 cut(s) 412, 1471
KroI GCCGGC 1 cut(s) 414
KroNI GCCGGC 1 cut(s) 416
KspAI GTTAAC 1 cut(s) 276
Kzo9I GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
LguI GCTCTTC 1 cut(s) 642
LmnI GCTCC 3 cut(s) 1888, 2705, 2831
MaeI CTAG 3 cut(s) 540, 1793, 2282
MaeII ACGT 4 cut(s) 433, 1630, 1786, 2203
MalI GATC 9 cut(s) 497, 702, 901, 912, 1096, 1323, 2010, 2413, 2850
MboI GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
MfeI CAATTG 2 cut(s) 303, 641
MflI RGATCY 4 cut(s) 899, 1094, 1321, 2008
MhlI GDGCHC 3 cut(s) 769, 2321, 2828
MlsI TGGCCA 1 cut(s) 491
MluNI TGGCCA 1 cut(s) 491
MlyI GAGTC 4 cut(s) 646, 1067, 1417, 2899
MmeI TCCRAC 3 cut(s) 2128, 2200, 2326
Mox20I TGGCCA 1 cut(s) 491
Mph1103I ATGCAT 2 cut(s) 800, 1771
MreI CGCCGGCG 1 cut(s) 414
MroNI GCCGGC 1 cut(s) 414
MroXI GAANNNNTTC 1 cut(s) 924
MscI TGGCCA 1 cut(s) 491
MslI CAYNNNNRTG 4 cut(s) 731, 1182, 1812, 2891
Msp20I TGGCCA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 476
MspI CCGG 5 cut(s) 415, 2409, 2541, 2830, 2844
MspR9I CCNGG 6 cut(s) 536, 897, 2013, 2541, 2771, 2830
MunI CAATTG 2 cut(s) 303, 641
Mva1269I GAATGC 1 cut(s) 2281
MvaI CCWGG 4 cut(s) 536, 897, 2013, 2771
NaeI GCCGGC 1 cut(s) 416
NciI CCSGG 2 cut(s) 2541, 2830
NcoI CCATGG 1 cut(s) 2259
NdeI CATATG 1 cut(s) 1771
NdeII GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
NgoMIV GCCGGC 1 cut(s) 414
NlaIV GGNNCC 5 cut(s) 1174, 1890, 2010, 2538, 2569
NmeAIII GCCGAG 1 cut(s) 1078
NmuCI GTSAC 9 cut(s) 122, 143, 914, 951, 1013, 1729, 1966, 2587, 2902
NsiI ATGCAT 2 cut(s) 800, 1771
NspI RCATGY 5 cut(s) 798, 935, 1346, 1811, 1974
PaeI GCATGC 1 cut(s) 798
PaeR7I CTCGAG 1 cut(s) 443
PagI TCATGA 1 cut(s) 181
PaqCI CACCTGC 1 cut(s) 2153
PciI ACATGT 2 cut(s) 931, 1970
PciSI GCTCTTC 1 cut(s) 642
PctI GAATGC 1 cut(s) 2281
PdiI GCCGGC 1 cut(s) 416
PdmI GAANNNNTTC 1 cut(s) 924
PfeI GAWTC 8 cut(s) 592, 626, 722, 1268, 1517, 1939, 2479, 2875
PfoI TCCNGGA 1 cut(s) 2539
PleI GAGTC 4 cut(s) 645, 1066, 1416, 2899
PmaCI CACGTG 2 cut(s) 434, 1787
PmlI CACGTG 2 cut(s) 434, 1787
PpsI GAGTC 4 cut(s) 645, 1066, 1416, 2899
Ppu21I YACGTR 2 cut(s) 434, 1787
PscI ACATGT 2 cut(s) 931, 1970
PshAI GACNNNNGTC 1 cut(s) 2433
PsiI TTATAA 3 cut(s) 614, 1350, 2610
Psp124BI GAGCTC 1 cut(s) 2828
Psp6I CCWGG 4 cut(s) 534, 895, 2011, 2769
PspCI CACGTG 2 cut(s) 434, 1787
PspFI CCCAGC 1 cut(s) 1907
PspGI CCWGG 4 cut(s) 534, 895, 2011, 2769
PspN4I GGNNCC 5 cut(s) 1174, 1890, 2010, 2538, 2569
PspPI GGNCC 5 cut(s) 841, 2435, 2567, 2627, 2767
PstI CTGCAG 6 cut(s) 475, 811, 1615, 1833, 1966, 2308
PstNI CAGNNNCTG 1 cut(s) 1271
PsuI RGATCY 4 cut(s) 899, 1094, 1321, 2008
PvuII CAGCTG 1 cut(s) 476
RsaI GTAC 4 cut(s) 29, 1155, 1581, 1654
RsaNI GTAC 4 cut(s) 28, 1154, 1580, 1653
RseI CAYNNNNRTG 4 cut(s) 731, 1182, 1812, 2891
SacI GAGCTC 1 cut(s) 2828
SapI GCTCTTC 1 cut(s) 642
Sau3AI GATC 9 cut(s) 495, 700, 899, 910, 1094, 1321, 2008, 2411, 2848
Sau96I GGNCC 5 cut(s) 841, 2435, 2567, 2627, 2767
SchI GAGTC 4 cut(s) 646, 1067, 1417, 2899
ScrFI CCNGG 6 cut(s) 536, 897, 2013, 2541, 2771, 2830
SduI GDGCHC 3 cut(s) 769, 2321, 2828
SfcI CTRYAG 8 cut(s) 471, 807, 1063, 1611, 1829, 1876, 1962, 2304
Sfr274I CTCGAG 1 cut(s) 443
SgrAI CRCCGGYG 1 cut(s) 414
SinI GGWCC 3 cut(s) 841, 2435, 2567
SlaI CTCGAG 1 cut(s) 443
SmiMI CAYNNNNRTG 4 cut(s) 731, 1182, 1812, 2891
SmlI CTYRAG 4 cut(s) 443, 845, 1575, 2396
SmoI CTYRAG 4 cut(s) 443, 845, 1575, 2396
SphI GCATGC 1 cut(s) 798
SsiI CCGC 3 cut(s) 44, 174, 418
SspI AATATT 1 cut(s) 2077
SspMI CTAG 3 cut(s) 540, 1793, 2282
SstI GAGCTC 1 cut(s) 2828
StyD4I CCNGG 6 cut(s) 534, 895, 2011, 2539, 2769, 2828
StyI CCWWGG 3 cut(s) 1006, 1372, 2259
TaaI ACNGT 8 cut(s) 32, 249, 1034, 1162, 1524, 2335, 2902, 2933
TaiI ACGT 4 cut(s) 436, 1633, 1789, 2206
TaqI TCGA 6 cut(s) 444, 720, 750, 1452, 1803, 2213
TatI WGTACW 1 cut(s) 1652
TauI GCSGC 1 cut(s) 46
TfiI GAWTC 8 cut(s) 592, 626, 722, 1268, 1517, 1939, 2479, 2875
TscAI CASTG 7 cut(s) 148, 231, 594, 611, 1971, 2445, 2938
TseFI GTSAC 9 cut(s) 122, 143, 914, 951, 1013, 1729, 1966, 2587, 2902
Tsp45I GTSAC 9 cut(s) 122, 143, 914, 951, 1013, 1729, 1966, 2587, 2902
TspRI CASTG 7 cut(s) 148, 231, 594, 611, 1971, 2445, 2938
VneI GTGCAC 2 cut(s) 765, 2317
VpaK11BI GGWCC 3 cut(s) 841, 2435, 2567
XapI RAATTY 4 cut(s) 113, 241, 1290, 2744
XceI RCATGY 5 cut(s) 798, 935, 1346, 1811, 1974
XhoI CTCGAG 1 cut(s) 443
XmiI GTMKAC 2 cut(s) 2427, 2957
XmnI GAANNNNTTC 1 cut(s) 924
XspI CTAG 3 cut(s) 540, 1793, 2282
Zsp2I ATGCAT 2 cut(s) 800, 1771
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.