RchiOBHm_Chr2g0110691

Aldehyde dehydrogenase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000503
Physical Location & Seq
Forward (+)
22243596 .. 22258590
14995 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ48432

Sequence Viewer

Length: 4296 bp
ATGTGTTTCCTGTACTGTATTAATGATTGGGTTAATTCCTTAATCTCTGTTATTCTAAATTTGGGGTTGATTTTTCCCTTGAAATTTGATTGTGGGTTTGTTTCCACAGGTGTGTTTTTGTGTTGGAGGTGGGGTTTTGGGTCTCTGGTAGTGCAAGGTTTCACTGACGTAGTGGGATTTTCAATCAGATTCTTCTTACTGCCATCAATAATGGAAACTGAAAGTCAAATTGAGCTTACTATACAGAACAATATGCTTCCTCCACAAGCTGGAACATTTCAAGATCGTGAAGATCTCATCCAATATGTTCGTGATTTTGGTGCTAGTCAAGGATATGTGGTGACCATCAAAAAGTCAAGGAAAGACAGGAGAGTGATTTTAGGTTGTGATAGGGGAGGTGTTTATCGTAATAGGCGTAAAATTGATGAAAGCAAACGCAAAAGGAAGGCAAATTCACGCCTTATAAACTGTCCCTTTGAAGCCATTGGGAAAAGGGAAGATGATTTGTGGGTACTCACAATAAAGAATGGGGAGCATAATCATGAAGCATTAAGGGACATGTCAGAGCATCCTTATAGTCGTCGCTTTACTGAGGAAGAGGTCAGGCAAATCAAGCAAATGACCGAAGCTGGTATAAAACCACGTCAAGTTCTTAAGGCTCTCAAGCAAATGAATCCTGAACTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCAAAGATCCGTCAAGGAACTCTATCAGAGAAAAGTTTCAAGACGTGGAGACCTGACAGGTCCGCTTTGGTGAATACAAGTTCTGCTCCCAGTGGGGGGTCATTGATGCAAAGTAACCAGCCGTTGAAGGTTCCTAATTTCATAGGAGGAAAATTCGTTGATTCACAAGGGTGTTCAATCATTGACGTAGTAAATCCTGCAACACAAGAGATTGTTTCTCATGTTCCTTTAACTACCTATGAAGAGTTCAAAGCTGCAGTTAGTTCAGCCAAGCAAGCTTTTCCTTCATGGAAGAACACACCTATTACTATACGTCAAAGAATCCTGTTTAAGCTTCAGGAGCTCATCCGCAGAGATATTGATAAACTTGCTATGAATATCACCTTAGAGCAGGGTAAGACGTTGAAGGGTGCTGAGAGTGATGTGCTCCGTGGTATAGAGGTGGTCGAACATGCTTGTGGGATGGCAACTCTACAGATGGGTGAGTTTGTTCCTAATGCATCTTATGGTATTGATACATACAGCATTAGGGAACCACTTGGTGTTTGTGCCGGGATATGCCCCTTCAACTTTTCCTCAATGATTCCATTATGGATGTTCCCAGTTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAAAAATCCAGGAGTTTCGATGATACTTGCAGCACTTGCTAAGGAGGCTGGTTTGCCCGATGGTGTGTTAAATATAGTCCATGGCACTCACGACATTGTTAATTATATCTGTGATGATGATGATATAAAGGCTGTTTCACTTGTTGGCTCGAGTACAGCTGGAATGCACATACATGCAAAGGCAGTTGCTAGGGGAAAGCGTGTTCAGTCCAATATAGGAGGAAAAAATCATGCCATCATCATGCCTGATGCTAGCATGGATGCAACCTTGAATGCTCTAGTCACGGCTGGTTTTGGTGCTGCAGGACAGAGGTGTATGGCTCTTAATACAGCTGTTTTTGTTGGAAACTCAATAACATGGGAGCGCGAACTAGTGGAACGTGCCAAAGCCCTGAAAGTCAATGTGGGAACAGATCCTAGTGCAGACGTTGGTCCAGTTATTACCAAAGAGGTGAAGGATTGCATATGCAGATTAGTCCAGAGCAGTGTCGAAAGCGGTGCTAGACTCGTTCTTGATGGGAGAAATGTTATGGTTCGAGGCTATGAGAATGGAAATTTTATTGGTCCTACTATCTTATGCGATGTTACAACCAATATGGATTGTTTTAAGGAAGAAATTTTTGGACCAGTTCTTCTGTGCATGCAGGCTGCCAGCCTAGAAGAAGCGATCACAATTATAAACAGAAACAGGTGTGGGAATGGAGCTTCCATATTCACAACATCTGGCATTGCTGCAAGGAAGTTCCAGAATGAAGTTGAGGCTGGGCTGGTTGGGATCAATGTTCCTGTTCCGGTTCCGTTGCCACTGTCCTCCTTTAACGGATCTAAGGCATCTTTTGGCAGCGATCTGAATATCTCTGGTAAGGCAGGAGTGCAATTTTACACCCAGATCAAAGCGGTTGCACAACAGTGGAAGGATTTACCTAGCTTAGAATCATCATTAGCCTTGCGTCCATCATATGAGACAAATATGGCAAGCAGAGGTGTCTCTTCTTCTTTGCCTTCAACATCTGAGAGAGATTCACCTAGTCATAGAATATCAGGAGCCACAAACTCAGAATCTGAGAGTGATTCACCAAGCAAGTTGCCAAGTCGTGGAGCTCCATTGTCCCTCCCTTCCACATCTGAGGCAGCTCTTCCAACCCAAGGAGCCTCATCTATGTCTCCAACCGCATATAGGGATTTTTCTAGTCGGGGCCTGTCCCTTGTCCTGCCAGCAACATCCGAGAGAGATCTGTCCGGTGTGGATATGTCACTAGCCATGCCTCGAGCAACAGAAGGAGATATACCAAAACAAGGTTTGACATTGACAACTTCACAATCATCAGAGAGAATGTATATGCCTCAAACTTCTCATTGGATGGAAACCTCAAGACCAACATCTCAAAGGACTGAAAATATTTCACCAAGTTCTGAGAGGCATCTTGCCTCAACATCTCAGAGGAATGACAAGAATGGCAACACGTCACTGTCATCTCAAAGGACTGGTACTTCTATGGCATTGACTTCCGAGAGCGTCTATGCCCCTGCCTCTCATGACAATATGGCTCCAATATCACTCCGAAGTGATGGTATGACTGGAACATCTCACAGGACGGATCCCACTCTACGTCCAACCTCTGAGAGAGCATACATGCTGGGAGTAACTCACCTGAATGACAATATGGGTCAAACATTTCAAAGGCCCGACACCATGTTTTCAACATCTGAGAGGATGTACATGCCCGCAAAATCTCATCAGCATGACCATATGGGTTCAACATCTCGGAGAACTGATATTCCTATGCATTCAACTTCGGAGCGGATGTTCATGTCCACAGCATCTCAAAGGAATGAGGAGTTGGCTGTTGCTTCTCAACCTGCCTCCGAGAGACTATATTTGTCTCCATTAGTTCCGAGAAATGCTGTTTTACAGAAAATGCAATGCACGAGTATCATCTCAGTGCCCACAATCCACTCCAGAAAGCTCAAACTTGGGAGGAACTCACACTCACAATTATCAGTTGCTCATCCTCAGAGCAACTTTGAAGACTATGATGATGTGAAGCTTCCTCTGCCTTCCCATGTCAAATCCATAACCAGCACTTCAAACCCATTCGTCAAACACTGCCACAAGCTTCGCCTGTCTTCTTCTTATCGCCACACTCATGGTTCAGTTCTCGTTGTGGGTGCTACACCCATCAGGGAAATATGCGAGTTTCAGAAGTCATTGCAAGAGAAAACTGTTATGATGGATTGTTTGCTTCTACCGGATAATTGTGAGGTTCCCGAATGGATTGATGATTTATCTGTTCGTATTGTGCAAGTGAGCTCTCCAGTGATGAAAAAGCTTTCGGGGATGCAATCAACTGAATCTATTGAAGCAATGGCTCTAATGAGAATACCTACGAGTTTTTCAGATATCAATGCTGATGAAAAGGAGGCAAACTGTAGGGCTTGGTTCCCATCTCCACATCGAGTTCTGGTCCTTGATGGTGTTCAGGATCCGGGTAATCTTGGTACACTGCTCAGATCAGCTACAGCTTTTGGATGGAATGGTGCTTTTCTTCTTCCCGGGTGTTGTGATCCATTCAATGAAAAAGCACTCCGAGCAAGCCGAGGAGCATCATTCCAGCTTCCTATTATTTCTGGAACTTGGAATCATCTTGAATCCCTCATAAGTGAATTCCAAATAAAGATGCTAGCTGGCCATCCAGAGACTGATAAAAAGTCGACGCCATTTCACCTTTCTCAAAACCTTGCAGATTCTCTTGCAACAGTGCCACTCAGCTTGGTTTTGGGTAGCGAAGGAAGTGGTCTGTCTGAGCAATCTCGACGGCAATCTGAGCTTGTAACCATTCCAATGGCAGGAGATTTTGAGTCGCTTAATGTTTCAGTTGCTGGTGGGATTTTCTTGTATATGTTGCAACCTAAAAACCATATATCATTATGA

Protein Analysis

1431

Amino Acids

156.85

Weight (kDa)

8.29

Isoelectric Point (pI)

50.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aldedh PF00171 291 - 755 2.1e-132 Aldehyde dehydrogenase family
SpoU_methylase PF00588 1275 - 1421 3.3e-29 SpoU rRNA Methylase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000503)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G14170
fragaria_vesca FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis pycom09g15250 pycom15g27380
rosa_chinensis RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 464, 2042
Acc36I ACCTGC 1 cut(s) 3232
AccB7I CCANNNNNTGG 2 cut(s) 269, 2459
AccBSI CCGCTC 1 cut(s) 3166
AccI GTMKAC 1 cut(s) 4076
AccII CGCG 1 cut(s) 1731
AciI CCGC 7 cut(s) 780, 1066, 1860, 2261, 2535, 3090, 3166
AclWI GGATC 9 cut(s) 718, 1772, 2147, 2194, 2957, 2970, 3842, 3855, 3923
AcoI YGGCCR 1 cut(s) 4051
AcsI RAATTY 7 cut(s) 58, 83, 451, 869, 1918, 1980, 4028
AcuI CTGAAG 1 cut(s) 1037
AcyI GRCGYC 1 cut(s) 4079
AdeI CACNNNGTG 1 cut(s) 1259
AfaI GTAC 6 cut(s) 14, 513, 1519, 2854, 3083, 3865
AfiI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2459, 2510, 2541, 2660, 4211
AflII CTTAAG 2 cut(s) 653, 1352
AflIII ACRYGT 3 cut(s) 558, 1331, 2826
AhlI ACTAGT 1 cut(s) 1735
AjiI CACGTC 3 cut(s) 644, 762, 2829
AjnI CCWGG 1 cut(s) 1372
AjuI GAANNNNNNNTTGG 4 cut(s) 1968, 2000, 3188, 3220
AleI CACNNNNGTG 3 cut(s) 110, 886, 2272
AloI GAACNNNNNNTCC 6 cut(s) 1551, 1583, 3127, 3155, 3159, 3187
Alw21I GWGCWC 4 cut(s) 1062, 1146, 2467, 3677
Alw26I GTCTC 8 cut(s) 147, 760, 2321, 2356, 2532, 3229, 3252, 4055
AlwI GGATC 9 cut(s) 718, 1772, 2147, 2194, 2957, 2970, 3842, 3855, 3923
AlwNI CAGNNNCTG 3 cut(s) 2426, 4064, 4244
Ama87I CYCGRG 3 cut(s) 1513, 2631, 3917
AoxI GGCC 3 cut(s) 2560, 3047, 4051
ApeKI GCWGC 7 cut(s) 971, 1394, 1664, 2012, 2096, 2205, 2495
ApoI RAATTY 7 cut(s) 58, 83, 451, 869, 1918, 1980, 4028
AseI ATTAAT 1 cut(s) 21
Asp700I GAANNNNTTC 1 cut(s) 752
AspLEI GCGC 1 cut(s) 1731
AspS9I GGNCC 7 cut(s) 777, 1796, 1928, 1988, 2560, 3048, 3829
AsuC2I CCSGG 4 cut(s) 1270, 3852, 3918, 3919
AsuNHI GCTAGC 2 cut(s) 1616, 4045
AvaI CYCGRG 3 cut(s) 1513, 2631, 3917
AvaII GGWCC 5 cut(s) 777, 1796, 1928, 1988, 3829
BaeGI GKGCMC 1 cut(s) 3312
BalI TGGCCA 1 cut(s) 4053
BamHI GGATCC 2 cut(s) 2962, 3847
BanII GRGCYC 3 cut(s) 1062, 2467, 3677
BarI GAAGNNNNNNTAC 2 cut(s) 2634, 2666
BauI CACGAG 1 cut(s) 3292
BbsI GAAGAC 2 cut(s) 3399, 3483
Bbv12I GWGCWC 4 cut(s) 1062, 1146, 2467, 3677
BbvI GCAGC 7 cut(s) 958, 1406, 1651, 1999, 2083, 2217, 2507
BceAI ACGGC 3 cut(s) 823, 1665, 4196
BcgI CGANNNNNNTGC 2 cut(s) 1844, 1878
BciT130I CCWGG 1 cut(s) 1374
BcnI CCSGG 4 cut(s) 1270, 3852, 3918, 3919
BcoDI GTCTC 8 cut(s) 147, 760, 2321, 2356, 2532, 3229, 3252, 4055
BcuI ACTAGT 1 cut(s) 1735
BfmI CTRYAG 6 cut(s) 683, 972, 1190, 1665, 3793, 3882
BfrI CTTAAG 2 cut(s) 653, 1352
BfuAI ACCTGC 1 cut(s) 3232
BglII AGATCT 2 cut(s) 292, 2596
BisI GCNGC 7 cut(s) 972, 1395, 1665, 2013, 2097, 2206, 2496
BlsI GCNGC 7 cut(s) 973, 1396, 1666, 2014, 2098, 2207, 2497
Bme1390I CCNGG 5 cut(s) 1270, 1374, 3852, 3918, 3919
Bme18I GGWCC 5 cut(s) 777, 1796, 1928, 1988, 3829
BmeT110I CYCGRG 3 cut(s) 1513, 2631, 3917
BmgBI CACGTC 3 cut(s) 644, 762, 2829
BmgT120I GGNCC 7 cut(s) 777, 1796, 1928, 1988, 2560, 3048, 3829
BmrFI CCNGG 5 cut(s) 1270, 1374, 3852, 3918, 3919
BmrI ACTGGG 2 cut(s) 801, 1313
BmtI GCTAGC 2 cut(s) 1620, 4049
BmuI ACTGGG 2 cut(s) 801, 1313
BoxI GACNNNNGTC 1 cut(s) 1794
BpiI GAAGAC 2 cut(s) 3399, 3483
BpmI CTGGAG 2 cut(s) 3307, 3663
Bpu10I CCTNAGC 1 cut(s) 1404
BpuEI CTTGAG 2 cut(s) 647, 2719
BpuMI CCSGG 4 cut(s) 1270, 3852, 3918, 3919
BsaHI GRCGYC 1 cut(s) 4079
BsaI GGTCTC 2 cut(s) 147, 760
BsaJI CCNNGG 6 cut(s) 695, 1147, 1444, 2509, 3917, 3961
BsaWI WCCGGW 3 cut(s) 2155, 2603, 3613
BsaXI ACNNNNNCTCC 4 cut(s) 118, 148, 3155, 3185
Bsc4I CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2459, 2510, 2541, 2660, 4211
Bse1I ACTGG 7 cut(s) 807, 1319, 1799, 1991, 2854, 2947, 3680
Bse3DI GCAATG 4 cut(s) 2091, 3293, 3572, 3735
BseBI CCWGG 1 cut(s) 1374
BseDI CCNNGG 6 cut(s) 695, 1147, 1444, 2509, 3917, 3961
BseLI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2459, 2510, 2541, 2660, 4211
BseMI GCAATG 4 cut(s) 2091, 3293, 3572, 3735
BseNI ACTGG 7 cut(s) 807, 1319, 1799, 1991, 2854, 2947, 3680
BseRI GAGGAG 2 cut(s) 3215, 3978
BseSI GKGCMC 1 cut(s) 3312
BseXI GCAGC 7 cut(s) 958, 1406, 1651, 1999, 2083, 2217, 2507
BseYI CCCAGC 2 cut(s) 2126, 3001
BsgI GTGCAG 1 cut(s) 1806
Bsh1236I CGCG 1 cut(s) 1731
BshFI GGCC 3 cut(s) 2562, 3049, 4053
BsiHKAI GWGCWC 4 cut(s) 1062, 1146, 2467, 3677
BsiHKCI CYCGRG 3 cut(s) 1513, 2631, 3917
BsiSI CCGG 6 cut(s) 1269, 2156, 2604, 3614, 3851, 3918
BslFI GGGAC 4 cut(s) 456, 569, 2458, 2551
BslI CCNNNNNNNGG 8 cut(s) 269, 812, 813, 2459, 2510, 2541, 2660, 4211
BsmAI GTCTC 8 cut(s) 147, 760, 2321, 2356, 2532, 3229, 3252, 4055
BsmFI GGGAC 4 cut(s) 456, 569, 2458, 2551
BsmI GAATGC 3 cut(s) 1533, 1642, 3151
BsnI GGCC 3 cut(s) 2562, 3049, 4053
Bso31I GGTCTC 2 cut(s) 147, 760
BsoBI CYCGRG 3 cut(s) 1513, 2631, 3917
Bsp1286I GDGCHC 5 cut(s) 1062, 1146, 2467, 3312, 3677
Bsp1407I TGTACA 1 cut(s) 3081
Bsp19I CCATGG 1 cut(s) 1444
BspACI CCGC 7 cut(s) 780, 1066, 1860, 2261, 2535, 3090, 3166
BspANI GGCC 3 cut(s) 2562, 3049, 4053
BspFNI CGCG 1 cut(s) 1731
BspHI TCATGA 2 cut(s) 541, 2899
BspMAI CTGCAG 3 cut(s) 687, 976, 1669
BspMI ACCTGC 1 cut(s) 3232
BspOI GCTAGC 2 cut(s) 1620, 4049
BspPI GGATC 9 cut(s) 718, 1772, 2147, 2194, 2957, 2970, 3842, 3855, 3923
BspQI GCTCTTC 1 cut(s) 2505
BspTI CTTAAG 2 cut(s) 653, 1352
BspTNI GGTCTC 2 cut(s) 147, 760
BsrBI CCGCTC 1 cut(s) 3166
BsrDI GCAATG 4 cut(s) 2091, 3293, 3572, 3735
BsrGI TGTACA 1 cut(s) 3081
BsrI ACTGG 7 cut(s) 807, 1319, 1799, 1991, 2854, 2947, 3680
BssECI CCNNGG 6 cut(s) 695, 1147, 1444, 2509, 3917, 3961
BssNI GRCGYC 1 cut(s) 4079
BssSI CACGAG 1 cut(s) 3292
BssT1I CCWWGG 3 cut(s) 695, 1444, 2509
Bst2BI CACGAG 1 cut(s) 3292
Bst2UI CCWGG 1 cut(s) 1374
Bst4CI ACNGT 8 cut(s) 17, 470, 2172, 2274, 2835, 3589, 3794, 4123
Bst6I CTCTTC 4 cut(s) 591, 954, 2359, 2505
BstACI GRCGYC 1 cut(s) 4079
BstAFI CTTAAG 2 cut(s) 653, 1352
BstAPI GCANNNNNTGC 1 cut(s) 1400
BstAUI TGTACA 1 cut(s) 3081
BstDSI CCRYGG 2 cut(s) 1147, 1444
BstEII GGTNACC 1 cut(s) 340
BstFNI CGCG 1 cut(s) 1731
BstHHI GCGC 1 cut(s) 1731
BstMAI GTCTC 8 cut(s) 147, 760, 2321, 2356, 2532, 3229, 3252, 4055
BstMWI GCNNNNNNNGC 8 cut(s) 613, 992, 1057, 1400, 1409, 3418, 3953, 4189
BstNI CCWGG 1 cut(s) 1374
BstNSI RCATGY 7 cut(s) 562, 1172, 1335, 1541, 2008, 3001, 3088
BstPAI GACNNNNGTC 1 cut(s) 1794
BstPI GGTNACC 1 cut(s) 340
BstSCI CCNGG 5 cut(s) 1268, 1372, 3850, 3916, 3917
BstSFI CTRYAG 6 cut(s) 683, 972, 1190, 1665, 3793, 3882
BstSLI GKGCMC 1 cut(s) 3312
BstUI CGCG 1 cut(s) 1731
BstV1I GCAGC 7 cut(s) 958, 1406, 1651, 1999, 2083, 2217, 2507
BstV2I GAAGAC 2 cut(s) 3399, 3483
BstX2I RGATCY 7 cut(s) 292, 723, 1777, 2186, 2596, 2962, 3847
BstXI CCANNNNNNTGG 2 cut(s) 3512, 4207
BstYI RGATCY 7 cut(s) 292, 723, 1777, 2186, 2596, 2962, 3847
BsuRI GGCC 3 cut(s) 2562, 3049, 4053
BtgI CCRYGG 2 cut(s) 1147, 1444
BtgZI GCGATG 1 cut(s) 1959
BtrI CACGTC 3 cut(s) 644, 762, 2829
BtsI GCAGTG 3 cut(s) 1855, 3469, 3866
BveI ACCTGC 1 cut(s) 3232
CaiI CAGNNNCTG 3 cut(s) 2426, 4064, 4244
CciI TCATGA 2 cut(s) 541, 2899
CfoI GCGC 1 cut(s) 1731
Cfr13I GGNCC 7 cut(s) 777, 1796, 1928, 1988, 2560, 3048, 3829
Cfr9I CCCGGG 1 cut(s) 3917
CseI GACGC 3 cut(s) 2303, 2869, 4087
Csp6I GTAC 6 cut(s) 13, 512, 1518, 2853, 3082, 3864
CspCI CAANNNNNGTGG 2 cut(s) 4116, 4151
CviQI GTAC 6 cut(s) 13, 512, 1518, 2853, 3082, 3864
DraIII CACNNNGTG 1 cut(s) 1259
EaeI YGGCCR 1 cut(s) 4051
Eam1104I CTCTTC 4 cut(s) 591, 954, 2359, 2505
EarI CTCTTC 4 cut(s) 591, 954, 2359, 2505
Ecl136II GAGCTC 3 cut(s) 1060, 2465, 3675
Eco130I CCWWGG 3 cut(s) 695, 1444, 2509
Eco24I GRGCYC 3 cut(s) 1062, 2467, 3677
Eco31I GGTCTC 2 cut(s) 147, 760
Eco32I GATATC 1 cut(s) 3766
Eco47I GGWCC 5 cut(s) 777, 1796, 1928, 1988, 3829
Eco53kI GAGCTC 3 cut(s) 1060, 2465, 3675
Eco57I CTGAAG 1 cut(s) 1037
Eco88I CYCGRG 3 cut(s) 1513, 2631, 3917
Eco91I GGTNACC 1 cut(s) 340
EcoICRI GAGCTC 3 cut(s) 1060, 2465, 3675
EcoO109I RGGNCCY 1 cut(s) 2560
EcoO65I GGTNACC 1 cut(s) 340
EcoRI GAATTC 1 cut(s) 4028
EcoRII CCWGG 1 cut(s) 1372
EcoRV GATATC 1 cut(s) 3766
EcoT14I CCWWGG 3 cut(s) 695, 1444, 2509
EcoT22I ATGCAT 2 cut(s) 1219, 3153
EcoT38I GRGCYC 3 cut(s) 1062, 2467, 3677
ErhI CCWWGG 3 cut(s) 695, 1444, 2509
FaqI GGGAC 4 cut(s) 456, 569, 2458, 2551
FauI CCCGC 1 cut(s) 3097
FauNDI CATATG 3 cut(s) 1829, 2323, 3114
FblI GTMKAC 1 cut(s) 4076
Fnu4HI GCNGC 7 cut(s) 972, 1395, 1665, 2013, 2097, 2206, 2496
FriOI GRGCYC 3 cut(s) 1062, 2467, 3677
Fsp4HI GCNGC 7 cut(s) 972, 1395, 1665, 2013, 2097, 2206, 2496
GlaI GCGC 1 cut(s) 1730
GluI GCNGC 7 cut(s) 972, 1395, 1665, 2013, 2097, 2206, 2496
GsaI CCCAGC 2 cut(s) 2130, 3005
GsuI CTGGAG 2 cut(s) 3307, 3663
HaeIII GGCC 3 cut(s) 2562, 3049, 4053
HapII CCGG 6 cut(s) 1269, 2156, 2604, 3614, 3851, 3918
HgaI GACGC 3 cut(s) 2303, 2869, 4087
HhaI GCGC 1 cut(s) 1731
Hin1I GRCGYC 1 cut(s) 4079
Hin6I GCGC 1 cut(s) 1729
HinP1I GCGC 1 cut(s) 1729
HincII GTYRAC 2 cut(s) 690, 4077
HindII GTYRAC 2 cut(s) 690, 4077
HindIII AAGCTT 5 cut(s) 993, 1049, 3410, 3479, 3692
HpaII CCGG 6 cut(s) 1269, 2156, 2604, 3614, 3851, 3918
Hpy166II GTNNAC 4 cut(s) 690, 3180, 3866, 4077
Hpy8I GTNNAC 4 cut(s) 690, 3180, 3866, 4077
Hpy99I CGWCG 3 cut(s) 585, 4081, 4182
HpyCH4III ACNGT 8 cut(s) 17, 470, 2172, 2274, 2835, 3589, 3794, 4123
HpyF10VI GCNNNNNNNGC 8 cut(s) 613, 992, 1057, 1400, 1409, 3418, 3953, 4189
Hsp92I GRCGYC 1 cut(s) 4079
HspAI GCGC 1 cut(s) 1729
LguI GCTCTTC 1 cut(s) 2505
Lsp1109I GCAGC 7 cut(s) 958, 1406, 1651, 1999, 2083, 2217, 2507
MaeIII GTNAC 9 cut(s) 340, 830, 1327, 1645, 1948, 2616, 2829, 3007, 4195
MbiI CCGCTC 1 cut(s) 3166
MflI RGATCY 7 cut(s) 292, 723, 1777, 2186, 2596, 2962, 3847
MhlI GDGCHC 5 cut(s) 1062, 1146, 2467, 3312, 3677
MlsI TGGCCA 1 cut(s) 4053
MluNI TGGCCA 1 cut(s) 4053
MlyI GAGTC 2 cut(s) 1863, 4232
MmeI TCCRAC 5 cut(s) 104, 1687, 2528, 2555, 3002
Mox20I TGGCCA 1 cut(s) 4053
Mph1103I ATGCAT 2 cut(s) 1219, 3153
MroXI GAANNNNTTC 1 cut(s) 752
MscI TGGCCA 1 cut(s) 4053
Msp20I TGGCCA 1 cut(s) 4053
MspA1I CMGCKG 2 cut(s) 1523, 1697
MspCI CTTAAG 2 cut(s) 653, 1352
MspI CCGG 6 cut(s) 1269, 2156, 2604, 3614, 3851, 3918
MspR9I CCNGG 5 cut(s) 1270, 1374, 3852, 3918, 3919
Mva1269I GAATGC 3 cut(s) 1533, 1642, 3151
MvaI CCWGG 1 cut(s) 1374
MvnI CGCG 1 cut(s) 1731
MwoI GCNNNNNNNGC 8 cut(s) 613, 992, 1057, 1400, 1409, 3418, 3953, 4189
NciI CCSGG 4 cut(s) 1270, 3852, 3918, 3919
NcoI CCATGG 1 cut(s) 1444
NdeI CATATG 3 cut(s) 1829, 2323, 3114
NheI GCTAGC 2 cut(s) 1616, 4045
NmeAIII GCCGAG 1 cut(s) 3986
NmuCI GTSAC 4 cut(s) 340, 1645, 2616, 2829
NsiI ATGCAT 2 cut(s) 1219, 3153
NspI RCATGY 7 cut(s) 562, 1172, 1335, 1541, 2008, 3001, 3088
OliI CACNNNNGTG 3 cut(s) 110, 886, 2272
PaeI GCATGC 1 cut(s) 2008
PaeR7I CTCGAG 2 cut(s) 1513, 2631
PagI TCATGA 2 cut(s) 541, 2899
PciI ACATGT 2 cut(s) 558, 1331
PciSI GCTCTTC 1 cut(s) 2505
PcsI WCGNNNNNNNCGW 1 cut(s) 412
PctI GAATGC 3 cut(s) 1533, 1642, 3151
PdmI GAANNNNTTC 1 cut(s) 752
PflMI CCANNNNNTGG 2 cut(s) 269, 2459
PfoI TCCNGGA 1 cut(s) 1372
PkrI GCNGC 7 cut(s) 973, 1396, 1666, 2014, 2098, 2207, 2497
PleI GAGTC 2 cut(s) 1863, 4231
PpsI GAGTC 2 cut(s) 1863, 4231
PscI ACATGT 2 cut(s) 558, 1331
PshAI GACNNNNGTC 1 cut(s) 1794
PshBI ATTAAT 1 cut(s) 21
PsiI TTATAA 2 cut(s) 464, 2042
Psp124BI GAGCTC 3 cut(s) 1062, 2467, 3677
Psp6I CCWGG 1 cut(s) 1372
PspEI GGTNACC 1 cut(s) 340
PspFI CCCAGC 2 cut(s) 2126, 3001
PspGI CCWGG 1 cut(s) 1372
PspPI GGNCC 7 cut(s) 777, 1796, 1928, 1988, 2560, 3048, 3829
PspXI VCTCGAGB 2 cut(s) 1513, 2631
PstI CTGCAG 3 cut(s) 687, 976, 1669
PstNI CAGNNNCTG 3 cut(s) 2426, 4064, 4244
PsuI RGATCY 7 cut(s) 292, 723, 1777, 2186, 2596, 2962, 3847
PvuII CAGCTG 2 cut(s) 1523, 1697
RsaI GTAC 6 cut(s) 14, 513, 1519, 2854, 3083, 3865
RsaNI GTAC 6 cut(s) 13, 512, 1518, 2853, 3082, 3864
SacI GAGCTC 3 cut(s) 1062, 2467, 3677
SalI GTCGAC 1 cut(s) 4075
SapI GCTCTTC 1 cut(s) 2505
SatI GCNGC 7 cut(s) 972, 1395, 1665, 2013, 2097, 2206, 2496
Sau96I GGNCC 7 cut(s) 777, 1796, 1928, 1988, 2560, 3048, 3829
SchI GAGTC 2 cut(s) 1863, 4232
ScrFI CCNGG 5 cut(s) 1270, 1374, 3852, 3918, 3919
SduI GDGCHC 5 cut(s) 1062, 1146, 2467, 3312, 3677
SfcI CTRYAG 6 cut(s) 683, 972, 1190, 1665, 3793, 3882
Sfr274I CTCGAG 2 cut(s) 1513, 2631
SinI GGWCC 5 cut(s) 777, 1796, 1928, 1988, 3829
SlaI CTCGAG 2 cut(s) 1513, 2631
SmaI CCCGGG 1 cut(s) 3919
SmlI CTYRAG 6 cut(s) 653, 662, 1352, 1513, 2631, 2734
SmoI CTYRAG 6 cut(s) 653, 662, 1352, 1513, 2631, 2734
SpeI ACTAGT 1 cut(s) 1735
SphI GCATGC 1 cut(s) 2008
SsiI CCGC 7 cut(s) 780, 1066, 1860, 2261, 2535, 3090, 3166
SspI AATATT 1 cut(s) 2764
SstI GAGCTC 3 cut(s) 1062, 2467, 3677
StyD4I CCNGG 5 cut(s) 1268, 1372, 3850, 3916, 3917
StyI CCWWGG 3 cut(s) 695, 1444, 2509
TaaI ACNGT 8 cut(s) 17, 470, 2172, 2274, 2835, 3589, 3794, 4123
TaqI TCGA 9 cut(s) 1164, 1382, 1514, 1854, 1900, 2632, 3820, 4076, 4177
TaqII GACCGA 1 cut(s) 638
TatI WGTACW 3 cut(s) 12, 1517, 3081
TseFI GTSAC 4 cut(s) 340, 1645, 2616, 2829
TseI GCWGC 7 cut(s) 971, 1394, 1664, 2012, 2096, 2205, 2495
Tsp45I GTSAC 4 cut(s) 340, 1645, 2616, 2829
TspGWI ACGGA 5 cut(s) 716, 1136, 2151, 2199, 2975
TspMI CCCGGG 1 cut(s) 3917
Van91I CCANNNNNTGG 2 cut(s) 269, 2459
Vha464I CTTAAG 2 cut(s) 653, 1352
VpaK11BI GGWCC 5 cut(s) 777, 1796, 1928, 1988, 3829
VspI ATTAAT 1 cut(s) 21
XapI RAATTY 7 cut(s) 58, 83, 451, 869, 1918, 1980, 4028
XceI RCATGY 7 cut(s) 562, 1172, 1335, 1541, 2008, 3001, 3088
XhoI CTCGAG 2 cut(s) 1513, 2631
XmaI CCCGGG 1 cut(s) 3917
XmiI GTMKAC 1 cut(s) 4076
XmnI GAANNNNTTC 1 cut(s) 752
Zsp2I ATGCAT 2 cut(s) 1219, 3153
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.