Methylmalonate-semialdehyde dehydrogenase
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Aldedh | PF00171 | 53 - 516 | 4.8e-144 | Aldehyde dehydrogenase family |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 191 |
| AccB1I | GGYRCC | 1 cut(s) | 1145 |
| AciI | CCGC | 6 cut(s) | 93, 266, 935, 1178, 1295, 1380 |
| AclWI | GGATC | 2 cut(s) | 92, 647 |
| AcsI | RAATTY | 3 cut(s) | 31, 1388, 1498 |
| AcuI | CTGAAG | 2 cut(s) | 261, 927 |
| AdeI | CACNNNGTG | 1 cut(s) | 542 |
| AfaI | GTAC | 2 cut(s) | 151, 463 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 393, 481, 864 |
| AflIII | ACRYGT | 2 cut(s) | 319, 847 |
| AjnI | CCWGG | 2 cut(s) | 655, 1570 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1251, 1283 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1413, 1445 |
| Alw26I | GTCTC | 1 cut(s) | 348 |
| AlwI | GGATC | 2 cut(s) | 92, 647 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 263, 1064 |
| Ama87I | CYCGRG | 1 cut(s) | 1183 |
| ApeKI | GCWGC | 9 cut(s) | 7, 112, 254, 830, 833, 932, 947, 1028, 1575 |
| ApoI | RAATTY | 3 cut(s) | 31, 1388, 1498 |
| AseI | ATTAAT | 1 cut(s) | 1121 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 278 |
| AspS9I | GGNCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| AsuC2I | CCSGG | 3 cut(s) | 1184, 1185, 1372 |
| AvaI | CYCGRG | 1 cut(s) | 1183 |
| AvaII | GGWCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| BanI | GGYRCC | 1 cut(s) | 1145 |
| BbsI | GAAGAC | 1 cut(s) | 404 |
| BbvI | GCAGC | 9 cut(s) | 19, 124, 241, 817, 845, 919, 934, 1015, 1587 |
| BccI | CCATC | 5 cut(s) | 65, 188, 649, 701, 1157 |
| BceAI | ACGGC | 2 cut(s) | 324, 1522 |
| BciT130I | CCWGG | 2 cut(s) | 657, 1572 |
| BcnI | CCSGG | 3 cut(s) | 1184, 1185, 1372 |
| BcoDI | GTCTC | 1 cut(s) | 348 |
| BfaI | CTAG | 2 cut(s) | 437, 900 |
| BfmI | CTRYAG | 3 cut(s) | 255, 831, 948 |
| Bme1390I | CCNGG | 5 cut(s) | 657, 1184, 1185, 1372, 1572 |
| Bme18I | GGWCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| BmeT110I | CYCGRG | 1 cut(s) | 1183 |
| BmgT120I | GGNCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| BmiI | GGNNCC | 3 cut(s) | 733, 1147, 1182 |
| BmrFI | CCNGG | 5 cut(s) | 657, 1184, 1185, 1372, 1572 |
| BmrI | ACTGGG | 1 cut(s) | 596 |
| BmsI | GCATC | 5 cut(s) | 400, 886, 950, 1057, 1487 |
| BmuI | ACTGGG | 1 cut(s) | 596 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1077 |
| BpiI | GAAGAC | 1 cut(s) | 404 |
| BpuEI | CTTGAG | 1 cut(s) | 189 |
| BpuMI | CCSGG | 3 cut(s) | 1184, 1185, 1372 |
| BsaJI | CCNNGG | 5 cut(s) | 430, 656, 1075, 1183, 1371 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 393, 481, 864 |
| Bse118I | RCCGGY | 1 cut(s) | 551 |
| Bse1I | ACTGG | 4 cut(s) | 602, 1082, 1439, 1471 |
| Bse3DI | GCAATG | 5 cut(s) | 585, 693, 1351, 1562, 1602 |
| BseBI | CCWGG | 2 cut(s) | 657, 1572 |
| BseDI | CCNNGG | 5 cut(s) | 430, 656, 1075, 1183, 1371 |
| BseGI | GGATG | 2 cut(s) | 415, 600 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 393, 481, 864 |
| BseMI | GCAATG | 5 cut(s) | 585, 693, 1351, 1562, 1602 |
| BseMII | CTCAG | 3 cut(s) | 985, 1389, 1565 |
| BseNI | ACTGG | 4 cut(s) | 602, 1082, 1439, 1471 |
| BseXI | GCAGC | 9 cut(s) | 19, 124, 241, 817, 845, 919, 934, 1015, 1587 |
| BshNI | GGYRCC | 1 cut(s) | 1145 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1183 |
| BsiSI | CCGG | 3 cut(s) | 552, 1184, 1371 |
| BslFI | GGGAC | 2 cut(s) | 546, 1166 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 393, 481, 864 |
| BsmAI | GTCTC | 1 cut(s) | 348 |
| BsmFI | GGGAC | 2 cut(s) | 546, 1166 |
| BsmI | GAATGC | 1 cut(s) | 925 |
| BsoBI | CYCGRG | 1 cut(s) | 1183 |
| Bsp143I | GATC | 3 cut(s) | 97, 652, 1536 |
| BspACI | CCGC | 6 cut(s) | 93, 266, 935, 1178, 1295, 1380 |
| BspCNI | CTCAG | 3 cut(s) | 984, 1390, 1564 |
| BspLI | GGNNCC | 3 cut(s) | 733, 1147, 1182 |
| BspMAI | CTGCAG | 3 cut(s) | 259, 835, 952 |
| BspPI | GGATC | 2 cut(s) | 92, 647 |
| BspQI | GCTCTTC | 1 cut(s) | 48 |
| BspT107I | GGYRCC | 1 cut(s) | 1145 |
| BsrDI | GCAATG | 5 cut(s) | 585, 693, 1351, 1562, 1602 |
| BsrFI | RCCGGY | 1 cut(s) | 551 |
| BsrI | ACTGG | 4 cut(s) | 602, 1082, 1439, 1471 |
| BssAI | RCCGGY | 1 cut(s) | 551 |
| BssECI | CCNNGG | 5 cut(s) | 430, 656, 1075, 1183, 1371 |
| BssMI | GATC | 3 cut(s) | 97, 652, 1536 |
| BssT1I | CCWWGG | 1 cut(s) | 1075 |
| Bst2UI | CCWGG | 2 cut(s) | 657, 1572 |
| Bst4CI | ACNGT | 3 cut(s) | 524, 979, 1546 |
| Bst6I | CTCTTC | 3 cut(s) | 48, 237, 1254 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 263, 1484 |
| BstC8I | GCNNGC | 5 cut(s) | 369, 453, 808, 812, 937 |
| BstDEI | CTNAG | 4 cut(s) | 971, 1303, 1398, 1551 |
| BstDSI | CCRYGG | 1 cut(s) | 430 |
| BstF5I | GGATG | 2 cut(s) | 415, 600 |
| BstKTI | GATC | 3 cut(s) | 100, 655, 1539 |
| BstMAI | GTCTC | 1 cut(s) | 348 |
| BstMBI | GATC | 3 cut(s) | 97, 652, 1536 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 263, 275, 340, 683, 692, 929, 1484 |
| BstNI | CCWGG | 2 cut(s) | 657, 1572 |
| BstNSI | RCATGY | 2 cut(s) | 455, 814 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1077 |
| BstSCI | CCNGG | 5 cut(s) | 655, 1182, 1183, 1370, 1570 |
| BstSFI | CTRYAG | 3 cut(s) | 255, 831, 948 |
| BstV1I | GCAGC | 9 cut(s) | 19, 124, 241, 817, 845, 919, 934, 1015, 1587 |
| BstV2I | GAAGAC | 1 cut(s) | 404 |
| BstX2I | RGATCY | 1 cut(s) | 652 |
| BstYI | RGATCY | 1 cut(s) | 652 |
| BtgI | CCRYGG | 1 cut(s) | 430 |
| BtsCI | GGATG | 2 cut(s) | 415, 600 |
| BtsI | GCAGTG | 2 cut(s) | 264, 1585 |
| BtsIMutI | CAGTG | 2 cut(s) | 264, 1585 |
| Cac8I | GCNNGC | 5 cut(s) | 369, 453, 808, 812, 937 |
| CaiI | CAGNNNCTG | 2 cut(s) | 263, 1064 |
| Cfr10I | RCCGGY | 1 cut(s) | 551 |
| Cfr13I | GGNCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| Cfr9I | CCCGGG | 1 cut(s) | 1183 |
| CseI | GACGC | 1 cut(s) | 165 |
| Csp6I | GTAC | 2 cut(s) | 150, 462 |
| CviQI | GTAC | 2 cut(s) | 150, 462 |
| DdeI | CTNAG | 4 cut(s) | 971, 1303, 1398, 1551 |
| DpnI | GATC | 3 cut(s) | 99, 654, 1538 |
| DpnII | GATC | 3 cut(s) | 97, 652, 1536 |
| DraI | TTTAAA | 1 cut(s) | 250 |
| DraIII | CACNNNGTG | 1 cut(s) | 542 |
| Eam1104I | CTCTTC | 3 cut(s) | 48, 237, 1254 |
| EarI | CTCTTC | 3 cut(s) | 48, 237, 1254 |
| EciI | GGCGGA | 1 cut(s) | 1310 |
| Eco130I | CCWWGG | 1 cut(s) | 1075 |
| Eco32I | GATATC | 1 cut(s) | 772 |
| Eco47I | GGWCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| Eco57I | CTGAAG | 2 cut(s) | 261, 927 |
| Eco88I | CYCGRG | 1 cut(s) | 1183 |
| EcoRII | CCWGG | 2 cut(s) | 655, 1570 |
| EcoRV | GATATC | 1 cut(s) | 772 |
| EcoT14I | CCWWGG | 1 cut(s) | 1075 |
| EcoT22I | ATGCAT | 1 cut(s) | 965 |
| ErhI | CCWWGG | 1 cut(s) | 1075 |
| FaqI | GGGAC | 2 cut(s) | 546, 1166 |
| FauI | CCCGC | 1 cut(s) | 928 |
| FokI | GGATG | 2 cut(s) | 422, 607 |
| FspBI | CTAG | 2 cut(s) | 437, 900 |
| HapII | CCGG | 3 cut(s) | 552, 1184, 1371 |
| HgaI | GACGC | 1 cut(s) | 165 |
| HincII | GTYRAC | 3 cut(s) | 317, 1327, 1522 |
| HindII | GTYRAC | 3 cut(s) | 317, 1327, 1522 |
| HindIII | AAGCTT | 1 cut(s) | 365 |
| HinfI | GANTC | 4 cut(s) | 583, 995, 1422, 1564 |
| HpaI | GTTAAC | 2 cut(s) | 1327, 1522 |
| HpaII | CCGG | 3 cut(s) | 552, 1184, 1371 |
| Hpy166II | GTNNAC | 3 cut(s) | 317, 1327, 1522 |
| Hpy188I | TCNGA | 8 cut(s) | 21, 48, 71, 126, 646, 776, 1041, 1395 |
| Hpy188III | TCNNGA | 2 cut(s) | 206, 825 |
| Hpy8I | GTNNAC | 3 cut(s) | 317, 1327, 1522 |
| Hpy99I | CGWCG | 1 cut(s) | 188 |
| HpyAV | CCTTC | 3 cut(s) | 268, 400, 574 |
| HpyCH4III | ACNGT | 3 cut(s) | 524, 979, 1546 |
| HpyCH4IV | ACGT | 5 cut(s) | 186, 319, 498, 847, 1367 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 263, 275, 340, 683, 692, 929, 1484 |
| HpyF3I | CTNAG | 4 cut(s) | 971, 1303, 1398, 1551 |
| HpySE526I | ACGT | 5 cut(s) | 186, 319, 498, 847, 1367 |
| KspAI | GTTAAC | 2 cut(s) | 1327, 1522 |
| Kzo9I | GATC | 3 cut(s) | 97, 652, 1536 |
| LguI | GCTCTTC | 1 cut(s) | 48 |
| LmnI | GCTCC | 3 cut(s) | 339, 448, 1349 |
| Lsp1109I | GCAGC | 9 cut(s) | 19, 124, 241, 817, 845, 919, 934, 1015, 1587 |
| LweI | GCATC | 5 cut(s) | 400, 886, 950, 1057, 1487 |
| MaeI | CTAG | 2 cut(s) | 437, 900 |
| MaeII | ACGT | 5 cut(s) | 186, 319, 498, 847, 1367 |
| MaeIII | GTNAC | 4 cut(s) | 304, 610, 1231, 1546 |
| MalI | GATC | 3 cut(s) | 99, 654, 1538 |
| MboI | GATC | 3 cut(s) | 97, 652, 1536 |
| MboII | GAAGA | 6 cut(s) | 35, 254, 409, 1271, 1271, 1573 |
| MflI | RGATCY | 1 cut(s) | 652 |
| MmeI | TCCRAC | 2 cut(s) | 970, 1399 |
| MnlI | CCTC | 9 cut(s) | 31, 42, 132, 433, 685, 1018, 1285, 1303, 1399 |
| Mph1103I | ATGCAT | 1 cut(s) | 965 |
| MroXI | GAANNNNTTC | 1 cut(s) | 278 |
| MseI | TTAA | 9 cut(s) | 230, 249, 635, 716, 747, 1121, 1326, 1521, 1587 |
| MslI | CAYNNNNRTG | 3 cut(s) | 420, 456, 887 |
| MspA1I | CMGCKG | 1 cut(s) | 1238 |
| MspI | CCGG | 3 cut(s) | 552, 1184, 1371 |
| MspR9I | CCNGG | 5 cut(s) | 657, 1184, 1185, 1372, 1572 |
| Mva1269I | GAATGC | 1 cut(s) | 925 |
| MvaI | CCWGG | 2 cut(s) | 657, 1572 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 263, 275, 340, 683, 692, 929, 1484 |
| NciI | CCSGG | 3 cut(s) | 1184, 1185, 1372 |
| NdeII | GATC | 3 cut(s) | 97, 652, 1536 |
| NlaIV | GGNNCC | 3 cut(s) | 733, 1147, 1182 |
| NsiI | ATGCAT | 1 cut(s) | 965 |
| NspI | RCATGY | 2 cut(s) | 455, 814 |
| PaeI | GCATGC | 2 cut(s) | 455, 814 |
| PciSI | GCTCTTC | 1 cut(s) | 48 |
| PctI | GAATGC | 1 cut(s) | 925 |
| PdmI | GAANNNNTTC | 1 cut(s) | 278 |
| PfeI | GAWTC | 4 cut(s) | 583, 995, 1422, 1564 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1077 |
| PshBI | ATTAAT | 1 cut(s) | 1121 |
| PsiI | TTATAA | 1 cut(s) | 191 |
| Psp6I | CCWGG | 2 cut(s) | 655, 1570 |
| PspGI | CCWGG | 2 cut(s) | 655, 1570 |
| PspN4I | GGNNCC | 3 cut(s) | 733, 1147, 1182 |
| PspPI | GGNCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| PstI | CTGCAG | 3 cut(s) | 259, 835, 952 |
| PstNI | CAGNNNCTG | 2 cut(s) | 263, 1064 |
| PsuI | RGATCY | 1 cut(s) | 652 |
| PvuII | CAGCTG | 1 cut(s) | 1238 |
| RsaI | GTAC | 2 cut(s) | 151, 463 |
| RsaNI | GTAC | 2 cut(s) | 150, 462 |
| RseI | CAYNNNNRTG | 3 cut(s) | 420, 456, 887 |
| SapI | GCTCTTC | 1 cut(s) | 48 |
| SaqAI | TTAA | 9 cut(s) | 230, 249, 635, 716, 747, 1121, 1326, 1521, 1587 |
| Sau3AI | GATC | 3 cut(s) | 97, 652, 1536 |
| Sau96I | GGNCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| ScrFI | CCNGG | 5 cut(s) | 657, 1184, 1185, 1372, 1572 |
| SfaNI | GCATC | 5 cut(s) | 400, 886, 950, 1057, 1487 |
| SfcI | CTRYAG | 3 cut(s) | 255, 831, 948 |
| SinI | GGWCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| SmaI | CCCGGG | 1 cut(s) | 1185 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 420, 456, 887 |
| SmlI | CTYRAG | 1 cut(s) | 204 |
| SmoI | CTYRAG | 1 cut(s) | 204 |
| SphI | GCATGC | 2 cut(s) | 455, 814 |
| SsiI | CCGC | 6 cut(s) | 93, 266, 935, 1178, 1295, 1380 |
| SspI | AATATT | 2 cut(s) | 379, 721 |
| SspMI | CTAG | 2 cut(s) | 437, 900 |
| StyD4I | CCNGG | 5 cut(s) | 655, 1182, 1183, 1370, 1570 |
| StyI | CCWWGG | 1 cut(s) | 1075 |
| TaaI | ACNGT | 3 cut(s) | 524, 979, 1546 |
| TaiI | ACGT | 5 cut(s) | 189, 322, 501, 850, 1370 |
| TaqI | TCGA | 1 cut(s) | 183 |
| TauI | GCSGC | 3 cut(s) | 95, 269, 1382 |
| TfiI | GAWTC | 4 cut(s) | 583, 995, 1422, 1564 |
| Tru1I | TTAA | 9 cut(s) | 230, 249, 635, 716, 747, 1121, 1326, 1521, 1587 |
| Tru9I | TTAA | 9 cut(s) | 230, 249, 635, 716, 747, 1121, 1326, 1521, 1587 |
| TscAI | CASTG | 2 cut(s) | 264, 1585 |
| TseI | GCWGC | 9 cut(s) | 7, 112, 254, 830, 833, 932, 947, 1028, 1575 |
| TspDTI | ATGAA | 2 cut(s) | 716, 1195 |
| TspGWI | ACGGA | 4 cut(s) | 90, 364, 419, 1123 |
| TspMI | CCCGGG | 1 cut(s) | 1183 |
| TspRI | CASTG | 2 cut(s) | 264, 1585 |
| VpaK11BI | GGWCC | 4 cut(s) | 1079, 1180, 1211, 1271 |
| VspI | ATTAAT | 1 cut(s) | 1121 |
| XapI | RAATTY | 3 cut(s) | 31, 1388, 1498 |
| XceI | RCATGY | 2 cut(s) | 455, 814 |
| XmaI | CCCGGG | 1 cut(s) | 1183 |
| XmnI | GAANNNNTTC | 1 cut(s) | 278 |
| XspI | CTAG | 2 cut(s) | 437, 900 |
| Zsp2I | ATGCAT | 1 cut(s) | 965 |