Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0000503

Physical Location & Seq

Genomic Coordinates Reverse (-)

21303971 .. 21316342

Gene Structure 12372 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G205000.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3255 bp

ATGGAAGCTCAGAGTCAAATTGAGGTTACAAAGCTGAACAAGATGCTTCCTCCACAACCGGGTGCATTTGAAGATCGTGAAGATCTCATCAAATATGTTCGTGATTTTGGTGCTAGTCAAGGATATGTGGTGACCATCAAGAAGTCGAGGAAAGACAGAAGAGTCATACTTGGTTGTGATAGAGGAGGTGTTTATCGCAATAGGCGTAAAATTGATGAAAGCAAGCGCAAAAGGAAAGCAAGTTCACGCCTTATAAATTGTCCTTTTGAAGCCATTGGGAAAAAGGAAGACGATTTATGGGTACTTGCAATAAAAAATGGGGATCACAACCATGATGCGTTAAAGGACATGTCAGAGCATCCATATAGTCGTCGTTTCACTGAGGAAGAGGTCAGACAAATCAAGCAAATGACTGAAGCTGGTGTGAAACCACGTCAAGTTCTTAAGACTCTCAAGCAAATCAATCCTGAACTGCAGTCAACACCAAGGCATTTGTATAACCTCAAAGCCAAGATCCGTCAAGGAAATCTATCAGAAAAAAGTTTCAAGTCATGGAGACCTGACAGATCTGCTCTGGTGAGTACAAGTGCTACTACCAGTGGGGGGTCATCAGAACAGAACAACCAACCGCTGAAGGTTCCTAATTTTATTGGAGGGAAATTTGTTGATTCTCAAGGGTGTTCAATCATTGATGTAGTAAATCCTGCGACACAAGAGGTTGTTTCTCATGTTCCTTTAACTACCTATGAAGAGTTCAAAGCTGCAGTTAGTTCAGCCAAGCAGGCTTTTCCGTCATGGAAAAACACTCCTATTACCACTCGTCAACGTATCATGTTTAAGCTCCAGGAGCTCATTCGGAGAGATATCGACAAGCTTGCAATGAATATCACCATAGAACAGGGTAAGACGTTGAAGGGTGCCGAGAATGATGTGCTCCGTGGCTTAGAGGTGGTTGAACATGCTTGTGGGATGGCAACTCTACAAATGGGGGAGTTTGTTCCTAATGCATCCAATGGTATTGATACATACTGCATTAGGGAACCACTAGGTGTTTGTGCTGGGATATGCCCTTTCAACTTTCCAGCAATGATTCCCTTGTGGATGTTCCCAATTGCAGTTACATGTGGCAATACATTTGTTCTTAAGCCATGTGAAAATAATCCAGGGGCTTCAATGATACTTGCAGCACTTGCAAAGGAGGCTGGTTTACCCAATGGTGTCTTAAATATTGTTCATGGCACCCATGACGTTATTAATTATGTATGTGATGATGATGACATAAAAGCTGTATCACTTGTTGGCTCAAATACGGCTTGGATGCACATATATGCGAGAGCAGTTGCTAGGGGAAAACGTGTTCAGTCTAATATAGGAGGAAAAAATCATGCAATCATCATGCCTGATGCTAGCATGGATGCTACCTTGAATGCTCTGGTTACTGCTGGCTTTGGTGCTGCAGGACAAAGGTGTATGACTCTGAATACAGCTGTTTTTGTTGGAGGTTCAAGGCCATGGGAAAGCGAAATTTTGGAGCATGTCAGAGCCCTTAAAGTGAATGTAGGAACAGATCCCAGTGCAGACCTTGGCCCAGTTATTACAAAAGAGGTGAAGGATTGCATTTGCAGATTAGTTCAGAGCAGTGTTGAAAGTGGTGCTAGACTTCTGCTTGATGGGAGAAATGTTAGGGTTCCAGGATATGAGAATGGAAATTTTATAGGTCCTACAATCTTATGTGATGTTACAACCAACATGGATTGCTTTAAGGAAGAAATTTTTGGACCAGTTCTTCTTTGCATGCAGGCTGCCAGCCTAGAAGAGGCCATATCAATTATAAACAGAAACAGGTATGGTAATGGAGCTTCCATATTCACAACATCCGGCATTGCTGCAAGGAAGTTCCAGAATGAAGTTGAGGCAGGGCTGGTTGGAATCAATGTCCCTGTTCCAATTCCATTGCCATTTTCTTCATTTGATGGATCTAAGGCATCTTTTGGTAGCGATCTCAATTTTTGTGGTAAGGCAGGTGTGCAATTTTACACCCAGATCAAGACGGTTGCGCAGCAGTGGAAGGATTTACCTAGCTTAGAAGTGTCGCTACCTCTGCCTCCATCATCTGAGACAGATCTGACCGGTAGAGGCGTGTCTTCAGCTTTGCCTTCAACATCTGAGAGAGATTCACCTAGCCAAAGAGTGTCACCAGACATGCACCCAGAATCTGAGAGTGATTCACCAAGTCATGGAGCTCCACTGTCCATCACTCCCACGTCTGAGGCAGATCTACCGAACCCAGGAGTCTTATCCGTGTCTCCAACTGCTTATAGGAATTTGTCTAGTCAAGGAGTGCCCCTTGTCAGGCCAGCAACATCTGAGAGAGATCTATCCAGTGCAGAGATCTCACTAGCTACGCATCCAGAACCAGAAAGAGATATACCAAGTCAAGGTGTGTCAATGAGACCGACCCAGAGTTCAGAGAGGATGTATATGCCTCAAACATCTCGTTGGATGGAAGCGTCAATACTAACACCTAGAAGGACTGAGAATATGCCTCAAACTTCTCATTGGATGGAAACCTCAATACCAGCATCTCAAAGGACTCAAAATATTCCAAGTTCTGAAAGGAATCATGTGCCTACATCTCAGAGGAATGGCAACAAGGCACTGACATCTCAAAGGACTGATACTTCTATGGCATTGACTTCTGGGAGGGTATATGTGCCTGCGTCTCATGACAACATGGTTCCGATATCACACAGAAATGACGGGATAAGTGCAACATCTCAAAGAATGGATACAACACTACATCCAGCTTCGGAGAGGGTATACATGCTGGCAGGATCTCAGCTGAATGACAGTATGGGCCAAACATTTCAAAGCAATGACACCACCATGTTTTCAACATCTGAGAGGCTTTACATGCCTGAAACATCTCATCGGCATGACCACATGGGTTCAACATCTCAGAGAACTGATATTACTCTACATCCAACTTCGGAGAGGATATACATGTCCACAGCATCTCAAAGGAATGACGACTTGGCTGTGGCCTCTCAACATGCCGATGCTGTTCCTTCCACCTCGGAAAGATTGTATATGTCTCCATTGGTTCAGAGAAATCCTGGTATGTCACCAACATCCGAGAGATTATATATTCCGGGTGCACCTCAGAGGATGTTCCCTCAAAACTCGATGGTTTCGATGGATGAATTTCCCAGTCAAGGAGCATCACTGACTTTACCGACCTCTCAGAGGATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005507 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0006979 GO:0008150 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0046872 GO:0046914 GO:0050896

KEGG Pathways

Metabolic & Signaling

ko00280 ko00410 ko00562 ko00640 ko01100 ko01200 map00280 map00410 map00562 map00640 map01100 map01200

Pfam Domains

Protein Families

Aldedh

Protein Analysis

1085

Amino Acids

118.91

Weight (kDa)

7.58

Isoelectric Point (pI)

53.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G14170
fragaria_vesca	FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_1g19320 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11390 FvH4_2g11410 FvH4_2g11410
malus_domestica	MD09G1234200.v1.1 MD15G1309700.v1.1
prunus_persica	Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.6G205000_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073100_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1 Prupe.8G073300_v2.0.a1
pyrus_communis	pycom09g15250 pycom15g27380
rosa_chinensis	RchiOBHm_Chr2g0110691 RchiOBHm_Chr2g0137621 RchiOBHm_Chr6g0270041 RchiOBHm_Chr6g0270061 RchiOBHm_Chr6g0270141
rosa_laevigata	RLG00000013815 RLG00000013819 RLG00000017831 RLG00000019609
rosa_multiflora	Rmu_co8442727.1_g000001 Rmu_sc0000389.1_g000042 Rmu_sc0000918.1_g000033 Rmu_sc0003043.1_g000019 Rmu_sc0004376.1_g000013
rosa_roxburghii	Rroxscaffold_2G00133030 Rroxscaffold_5G00350410 Rroxscaffold_5G00350420 Rroxscaffold_5G00350430 Rroxscaffold_6G00398360 Rroxscaffold_7G00198140 Rroxscaffold_7G00198180
rosa_rugosa	Rorug02G0168700 Rorug02G0168800 Rorug02G0168800 Rorug02G0338300 Rorug06G0052100 Rorug06G0052200 Rorug06G0052800 Rorug06G0052900
rosa_samantha	Rh2AG221000 Rh2AG387100 Rh2AG387200 Rh2AG547100 Rh2BG231100 Rh2BG504800 Rh2CG223400 Rh2CG374500 Rh2DG227200 Rh2DG410100 Rh2DG516200 Rh5CG251300 Rh6AG171200 Rh6AG171700 Rh6BG175700 Rh6BG176100 Rh6CG170500 Rh6CG171200 Rh6CG216400 Rh6DG162700 Rh6DG163000
rosa_wichuraiana	Rw2G017050 Rw6G014700 Rw6G014740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	254, 1832
AarI	CACCTGC	1 cut(s)	2012
AasI	GACNNNNNNGTC	1 cut(s)	161
Acc16I	TGCGCA	1 cut(s)	2058
Acc36I	ACCTGC	1 cut(s)	2012
AccB1I	GGYRCC	2 cut(s)	917, 1238
AccB7I	CCANNNNNTGG	1 cut(s)	2237
AccI	GTMKAC	1 cut(s)	2820
AciI	CCGC	1 cut(s)	629
AclWI	GGATC	5 cut(s)	330, 508, 1562, 1984, 2842
AcsI	RAATTY	6 cut(s)	659, 1524, 1708, 1770, 2323, 3203
AcuI	CTGAAG	3 cut(s)	435, 653, 2130
AdeI	CACNNNGTG	1 cut(s)	1049
AfaI	GTAC	2 cut(s)	303, 583
AfiI	CCNNNNNNNGG	9 cut(s)	59, 603, 1816, 2237, 2288, 2352, 2438, 3215, 3246
AflII	CTTAAG	2 cut(s)	443, 1142
AflIII	ACRYGT	4 cut(s)	348, 1121, 1354, 3003
AgeI	ACCGGT	1 cut(s)	2129
AjiI	CACGTC	2 cut(s)	434, 2265
AjnI	CCWGG	5 cut(s)	843, 1162, 1690, 2287, 3115
AjuI	GAANNNNNNNTTGG	4 cut(s)	1758, 1790, 3017, 3049
AloI	GAACNNNNNNTCC	4 cut(s)	226, 258, 1341, 1373
Alw21I	GWGCWC	4 cut(s)	852, 936, 2245, 3160
Alw26I	GTCTC	6 cut(s)	550, 2111, 2310, 2446, 2727, 3099
Alw44I	GTGCAC	1 cut(s)	3156
AlwI	GGATC	5 cut(s)	330, 508, 1562, 1984, 2842
AlwNI	CAGNNNCTG	1 cut(s)	2216
AoxI	GGCC	6 cut(s)	1508, 1585, 1818, 2354, 2857, 3042
ApaLI	GTGCAC	1 cut(s)	3156
ApeKI	GCWGC	6 cut(s)	761, 1184, 1454, 1802, 1886, 2059
ApoI	RAATTY	6 cut(s)	659, 1524, 1708, 1770, 2323, 3203
AseI	ATTAAT	1 cut(s)	1254
AsiGI	ACCGGT	1 cut(s)	2129
AspLEI	GCGC	2 cut(s)	228, 2059
AspS9I	GGNCC	4 cut(s)	1586, 1718, 1778, 2857
AsuC2I	CCSGG	2 cut(s)	60, 3153
AsuHPI	GGTGA	8 cut(s)	142, 589, 880, 1618, 2169, 2187, 2220, 3117
AsuNHI	GCTAGC	1 cut(s)	1406
AvaII	GGWCC	2 cut(s)	1718, 1778
BaeGI	GKGCMC	2 cut(s)	2346, 3160
BanI	GGYRCC	2 cut(s)	917, 1238
BanII	GRGCYC	3 cut(s)	852, 1546, 2245
BarI	GAAGNNNNNNTAC	6 cut(s)	1843, 1875, 2079, 2111, 2499, 2531
BbsI	GAAGAC	2 cut(s)	294, 2136
Bbv12I	GWGCWC	4 cut(s)	852, 936, 2245, 3160
BbvI	GCAGC	6 cut(s)	748, 1196, 1441, 1789, 1873, 2071
BceAI	ACGGC	1 cut(s)	1326
BcgI	CGANNNNNNTGC	2 cut(s)	857, 891
BciT130I	CCWGG	5 cut(s)	845, 1164, 1692, 2289, 3117
BciVI	GTATCC	1 cut(s)	2782
BcnI	CCSGG	2 cut(s)	60, 3153
BcoDI	GTCTC	6 cut(s)	550, 2111, 2310, 2446, 2727, 3099
BfmI	CTRYAG	3 cut(s)	473, 762, 1455
BfrI	CTTAAG	2 cut(s)	443, 1142
BfuAI	ACCTGC	1 cut(s)	2012
BfuI	GTATCC	1 cut(s)	2782
BglI	GCCNNNNNGGC	1 cut(s)	782
BglII	AGATCT	6 cut(s)	82, 566, 2122, 2275, 2374, 2391
BisI	GCNGC	6 cut(s)	762, 1185, 1455, 1803, 1887, 2060
BlsI	GCNGC	6 cut(s)	763, 1186, 1456, 1804, 1888, 2061
Bme1390I	CCNGG	7 cut(s)	60, 845, 1164, 1692, 2289, 3117, 3153
Bme18I	GGWCC	2 cut(s)	1718, 1778
BmgBI	CACGTC	2 cut(s)	434, 2265
BmgT120I	GGNCC	4 cut(s)	1586, 1718, 1778, 2857
BmiI	GGNNCC	6 cut(s)	639, 919, 1041, 1240, 1689, 2739
BmrFI	CCNGG	7 cut(s)	60, 845, 1164, 1692, 2289, 3117, 3153
BmrI	ACTGGG	3 cut(s)	1566, 1583, 3204
BmtI	GCTAGC	1 cut(s)	1410
BmuI	ACTGGG	3 cut(s)	1566, 1583, 3204
BpiI	GAAGAC	2 cut(s)	294, 2136
BpmI	CTGGAG	1 cut(s)	827
BpuEI	CTTGAG	2 cut(s)	437, 657
BpuMI	CCSGG	2 cut(s)	60, 3153
BsaI	GGTCTC	2 cut(s)	550, 2446
BsaJI	CCNNGG	7 cut(s)	485, 937, 1163, 1511, 1582, 2287, 3075
BsaWI	WCCGGW	1 cut(s)	2129
Bsc4I	CCNNNNNNNGG	9 cut(s)	59, 603, 1816, 2237, 2288, 2352, 2438, 3215, 3246
Bse118I	RCCGGY	1 cut(s)	2129
Bse1I	ACTGG	6 cut(s)	597, 1572, 1589, 1781, 2382, 3210
Bse3DI	GCAATG	5 cut(s)	885, 1092, 1881, 1952, 2881
BseBI	CCWGG	5 cut(s)	845, 1164, 1692, 2289, 3117
BseDI	CCNNGG	7 cut(s)	485, 937, 1163, 1511, 1582, 2287, 3075
BseLI	CCNNNNNNNGG	9 cut(s)	59, 603, 1816, 2237, 2288, 2352, 2438, 3215, 3246
BseMI	GCAATG	5 cut(s)	885, 1092, 1881, 1952, 2881
BseNI	ACTGG	6 cut(s)	597, 1572, 1589, 1781, 2382, 3210
BseRI	GAGGAG	1 cut(s)	198
BseSI	GKGCMC	2 cut(s)	2346, 3160
BseXI	GCAGC	6 cut(s)	748, 1196, 1441, 1789, 1873, 2071
BseYI	CCCAGC	1 cut(s)	1058
BsgI	GTGCAG	2 cut(s)	1596, 2406
BshFI	GGCC	6 cut(s)	1510, 1587, 1820, 2356, 2859, 3044
BshNI	GGYRCC	2 cut(s)	917, 1238
BshTI	ACCGGT	1 cut(s)	2129
BsiHKAI	GWGCWC	4 cut(s)	852, 936, 2245, 3160
BsiSI	CCGG	4 cut(s)	59, 1878, 2130, 3152
BslFI	GGGAC	1 cut(s)	1922
BslI	CCNNNNNNNGG	9 cut(s)	59, 603, 1816, 2237, 2288, 2352, 2438, 3215, 3246
BsmAI	GTCTC	6 cut(s)	550, 2111, 2310, 2446, 2727, 3099
BsmBI	CGTCTC	1 cut(s)	2727
BsmFI	GGGAC	1 cut(s)	1922
BsmI	GAATGC	1 cut(s)	1432
BsnI	GGCC	6 cut(s)	1510, 1587, 1820, 2356, 2859, 3044
Bso31I	GGTCTC	2 cut(s)	550, 2446
Bsp1286I	GDGCHC	6 cut(s)	852, 936, 1546, 2245, 2346, 3160
Bsp19I	CCATGG	1 cut(s)	1511
BspACI	CCGC	1 cut(s)	629
BspANI	GGCC	6 cut(s)	1510, 1587, 1820, 2356, 2859, 3044
BspHI	TCATGA	1 cut(s)	2725
BspLI	GGNNCC	6 cut(s)	639, 919, 1041, 1240, 1689, 2739
BspMAI	CTGCAG	3 cut(s)	477, 766, 1459
BspMI	ACCTGC	1 cut(s)	2012
BspOI	GCTAGC	1 cut(s)	1410
BspPI	GGATC	5 cut(s)	330, 508, 1562, 1984, 2842
BspT107I	GGYRCC	2 cut(s)	917, 1238
BspTI	CTTAAG	2 cut(s)	443, 1142
BspTNI	GGTCTC	2 cut(s)	550, 2446
BsrDI	GCAATG	5 cut(s)	885, 1092, 1881, 1952, 2881
BsrFI	RCCGGY	1 cut(s)	2129
BsrI	ACTGG	6 cut(s)	597, 1572, 1589, 1781, 2382, 3210
BssAI	RCCGGY	1 cut(s)	2129
BssECI	CCNNGG	7 cut(s)	485, 937, 1163, 1511, 1582, 2287, 3075
BssNAI	GTATAC	1 cut(s)	2821
BssT1I	CCWWGG	3 cut(s)	485, 1511, 1582
Bst1107I	GTATAC	1 cut(s)	2821
Bst2UI	CCWGG	5 cut(s)	845, 1164, 1692, 2289, 3117
Bst4CI	ACNGT	3 cut(s)	2053, 2250, 2852
Bst6I	CTCTTC	4 cut(s)	154, 381, 744, 1809
BstAFI	CTTAAG	2 cut(s)	443, 1142
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstDSI	CCRYGG	2 cut(s)	937, 1511
BstEII	GGTNACC	1 cut(s)	130
BstENI	CCTNNNNNAGG	2 cut(s)	1814, 3244
BstHHI	GCGC	2 cut(s)	228, 2059
BstMAI	GTCTC	6 cut(s)	550, 2111, 2310, 2446, 2727, 3099
BstMWI	GCNNNNNNNGC	6 cut(s)	782, 847, 1190, 1199, 2101, 2914
BstNI	CCWGG	5 cut(s)	845, 1164, 1692, 2289, 3117
BstPI	GGTNACC	1 cut(s)	130
BstSCI	CCNGG	7 cut(s)	58, 843, 1162, 1690, 2287, 3115, 3151
BstSFI	CTRYAG	3 cut(s)	473, 762, 1455
BstSLI	GKGCMC	2 cut(s)	2346, 3160
BstV1I	GCAGC	6 cut(s)	748, 1196, 1441, 1789, 1873, 2071
BstV2I	GAAGAC	2 cut(s)	294, 2136
BstZ17I	GTATAC	1 cut(s)	2821
BsuI	GTATCC	1 cut(s)	2782
BsuRI	GGCC	6 cut(s)	1510, 1587, 1820, 2356, 2859, 3044
BtgI	CCRYGG	2 cut(s)	937, 1511
BtrI	CACGTC	2 cut(s)	434, 2265
BtsI	GCAGTG	2 cut(s)	1645, 2069
BtsIMutI	CAGTG	9 cut(s)	378, 604, 1579, 1645, 2069, 2246, 2389, 2657, 3224
BveI	ACCTGC	1 cut(s)	2012
CaiI	CAGNNNCTG	1 cut(s)	2216
CciI	TCATGA	1 cut(s)	2725
CfoI	GCGC	2 cut(s)	228, 2059
Cfr10I	RCCGGY	1 cut(s)	2129
Cfr13I	GGNCC	4 cut(s)	1586, 1718, 1778, 2857
CseI	GACGC	2 cut(s)	2499, 2709
Csp6I	GTAC	2 cut(s)	302, 582
CspAI	ACCGGT	1 cut(s)	2129
CspCI	CAANNNNNGTGG	2 cut(s)	1993, 2028
CviQI	GTAC	2 cut(s)	302, 582
DraIII	CACNNNGTG	1 cut(s)	1049
DrdI	GACNNNNNNGTC	1 cut(s)	161
DseDI	GACNNNNNNGTC	1 cut(s)	161
Eam1104I	CTCTTC	4 cut(s)	154, 381, 744, 1809
EarI	CTCTTC	4 cut(s)	154, 381, 744, 1809
Ecl136II	GAGCTC	2 cut(s)	850, 2243
Eco130I	CCWWGG	3 cut(s)	485, 1511, 1582
Eco24I	GRGCYC	3 cut(s)	852, 1546, 2245
Eco31I	GGTCTC	2 cut(s)	550, 2446
Eco32I	GATATC	2 cut(s)	865, 2745
Eco47I	GGWCC	2 cut(s)	1718, 1778
Eco53kI	GAGCTC	2 cut(s)	850, 2243
Eco57I	CTGAAG	3 cut(s)	435, 653, 2130
Eco91I	GGTNACC	1 cut(s)	130
EcoICRI	GAGCTC	2 cut(s)	850, 2243
EcoNI	CCTNNNNNAGG	2 cut(s)	1814, 3244
EcoO109I	RGGNCCY	1 cut(s)	1718
EcoO65I	GGTNACC	1 cut(s)	130
EcoRII	CCWGG	5 cut(s)	843, 1162, 1690, 2287, 3115
EcoRV	GATATC	2 cut(s)	865, 2745
EcoT14I	CCWWGG	3 cut(s)	485, 1511, 1582
EcoT22I	ATGCAT	1 cut(s)	1009
EcoT38I	GRGCYC	3 cut(s)	852, 1546, 2245
ErhI	CCWWGG	3 cut(s)	485, 1511, 1582
Esp3I	CGTCTC	1 cut(s)	2727
FaqI	GGGAC	1 cut(s)	1922
FblI	GTMKAC	1 cut(s)	2820
Fnu4HI	GCNGC	6 cut(s)	762, 1185, 1455, 1803, 1887, 2060
FriOI	GRGCYC	3 cut(s)	852, 1546, 2245
Fsp4HI	GCNGC	6 cut(s)	762, 1185, 1455, 1803, 1887, 2060
FspI	TGCGCA	1 cut(s)	2058
GlaI	GCGC	2 cut(s)	227, 2058
GluI	GCNGC	6 cut(s)	762, 1185, 1455, 1803, 1887, 2060
GsaI	CCCAGC	1 cut(s)	1062
GsuI	CTGGAG	1 cut(s)	827
HaeIII	GGCC	6 cut(s)	1510, 1587, 1820, 2356, 2859, 3044
HapII	CCGG	4 cut(s)	59, 1878, 2130, 3152
HgaI	GACGC	2 cut(s)	2499, 2709
HhaI	GCGC	2 cut(s)	228, 2059
Hin6I	GCGC	2 cut(s)	226, 2057
HinP1I	GCGC	2 cut(s)	226, 2057
HincII	GTYRAC	2 cut(s)	480, 824
HindII	GTYRAC	2 cut(s)	480, 824
HindIII	AAGCTT	1 cut(s)	872
HpaII	CCGG	4 cut(s)	59, 1878, 2130, 3152
HphI	GGTGA	8 cut(s)	142, 589, 880, 1618, 2169, 2187, 2220, 3117
Hpy166II	GTNNAC	7 cut(s)	245, 480, 824, 1208, 2821, 3009, 3158
Hpy188III	TCNNGA	8 cut(s)	77, 101, 139, 467, 1900, 2047, 2411, 2726
Hpy8I	GTNNAC	7 cut(s)	245, 480, 824, 1208, 2821, 3009, 3158
Hpy99I	CGWCG	1 cut(s)	375
HpyAV	CCTTC	7 cut(s)	628, 907, 1603, 2062, 2166, 2523, 3078
HpyCH4III	ACNGT	3 cut(s)	2053, 2250, 2852
HpyCH4IV	ACGT	6 cut(s)	433, 826, 908, 1248, 1354, 2264
HpyF10VI	GCNNNNNNNGC	6 cut(s)	782, 847, 1190, 1199, 2101, 2914
HpySE526I	ACGT	6 cut(s)	433, 826, 908, 1248, 1354, 2264
HspAI	GCGC	2 cut(s)	226, 2057
LmnI	GCTCC	8 cut(s)	846, 847, 939, 1531, 1856, 2240, 2248, 3218
Lsp1109I	GCAGC	6 cut(s)	748, 1196, 1441, 1789, 1873, 2071
MaeII	ACGT	6 cut(s)	433, 826, 908, 1248, 1354, 2264
MaeIII	GTNAC	7 cut(s)	25, 130, 1117, 1435, 1738, 2193, 3123
MfeI	CAATTG	1 cut(s)	1110
MhlI	GDGCHC	6 cut(s)	852, 936, 1546, 2245, 2346, 3160
MlyI	GAGTC	6 cut(s)	22, 171, 442, 1468, 2301, 2587
MmeI	TCCRAC	5 cut(s)	1477, 1906, 2333, 2480, 3008
Mph1103I	ATGCAT	1 cut(s)	1009
MseI	TTAA	9 cut(s)	341, 444, 737, 837, 1143, 1223, 1254, 1548, 1761
MslI	CAYNNNNRTG	7 cut(s)	330, 963, 1326, 2754, 2885, 2934, 3057
MspA1I	CMGCKG	3 cut(s)	631, 1487, 2842
MspCI	CTTAAG	2 cut(s)	443, 1142
MspI	CCGG	4 cut(s)	59, 1878, 2130, 3152
MspR9I	CCNGG	7 cut(s)	60, 845, 1164, 1692, 2289, 3117, 3153
MunI	CAATTG	1 cut(s)	1110
Mva1269I	GAATGC	1 cut(s)	1432
MvaI	CCWGG	5 cut(s)	845, 1164, 1692, 2289, 3117
MwoI	GCNNNNNNNGC	6 cut(s)	782, 847, 1190, 1199, 2101, 2914
NciI	CCSGG	2 cut(s)	60, 3153
NcoI	CCATGG	1 cut(s)	1511
NheI	GCTAGC	1 cut(s)	1406
NlaIV	GGNNCC	6 cut(s)	639, 919, 1041, 1240, 1689, 2739
NmeAIII	GCCGAG	1 cut(s)	946
NmuCI	GTSAC	3 cut(s)	130, 2193, 3123
NsbI	TGCGCA	1 cut(s)	2058
NsiI	ATGCAT	1 cut(s)	1009
PaeI	GCATGC	1 cut(s)	1798
PagI	TCATGA	1 cut(s)	2725
PaqCI	CACCTGC	1 cut(s)	2012
PciI	ACATGT	3 cut(s)	348, 1121, 3003
PcsI	WCGNNNNNNNCGW	2 cut(s)	202, 3191
PctI	GAATGC	1 cut(s)	1432
PfeI	GAWTC	7 cut(s)	668, 1090, 1929, 2174, 2213, 2225, 2620
PflMI	CCANNNNNTGG	1 cut(s)	2237
PfoI	TCCNGGA	2 cut(s)	843, 1690
PinAI	ACCGGT	1 cut(s)	2129
PkrI	GCNGC	6 cut(s)	763, 1186, 1456, 1804, 1888, 2061
PleI	GAGTC	6 cut(s)	21, 170, 442, 1468, 2300, 2587
PpsI	GAGTC	6 cut(s)	21, 170, 442, 1468, 2300, 2587
PpuMI	RGGWCCY	1 cut(s)	1718
PscI	ACATGT	3 cut(s)	348, 1121, 3003
PshBI	ATTAAT	1 cut(s)	1254
PsiI	TTATAA	2 cut(s)	254, 1832
Psp124BI	GAGCTC	2 cut(s)	852, 2245
Psp5II	RGGWCCY	1 cut(s)	1718
Psp6I	CCWGG	5 cut(s)	843, 1162, 1690, 2287, 3115
PspEI	GGTNACC	1 cut(s)	130
PspFI	CCCAGC	1 cut(s)	1058
PspGI	CCWGG	5 cut(s)	843, 1162, 1690, 2287, 3115
PspN4I	GGNNCC	6 cut(s)	639, 919, 1041, 1240, 1689, 2739
PspPI	GGNCC	4 cut(s)	1586, 1718, 1778, 2857
PspPPI	RGGWCCY	1 cut(s)	1718
PsrI	GAACNNNNNNTAC	2 cut(s)	2956, 2988
PstI	CTGCAG	3 cut(s)	477, 766, 1459
PstNI	CAGNNNCTG	1 cut(s)	2216
PvuII	CAGCTG	2 cut(s)	1487, 2842
RsaI	GTAC	2 cut(s)	303, 583
RsaNI	GTAC	2 cut(s)	302, 582
RseI	CAYNNNNRTG	7 cut(s)	330, 963, 1326, 2754, 2885, 2934, 3057
SacI	GAGCTC	2 cut(s)	852, 2245
SaqAI	TTAA	9 cut(s)	341, 444, 737, 837, 1143, 1223, 1254, 1548, 1761
SatI	GCNGC	6 cut(s)	762, 1185, 1455, 1803, 1887, 2060
Sau96I	GGNCC	4 cut(s)	1586, 1718, 1778, 2857
SchI	GAGTC	6 cut(s)	22, 171, 442, 1468, 2301, 2587
ScrFI	CCNGG	7 cut(s)	60, 845, 1164, 1692, 2289, 3117, 3153
SduI	GDGCHC	6 cut(s)	852, 936, 1546, 2245, 2346, 3160
SfcI	CTRYAG	3 cut(s)	473, 762, 1455
SinI	GGWCC	2 cut(s)	1718, 1778
SmiMI	CAYNNNNRTG	7 cut(s)	330, 963, 1326, 2754, 2885, 2934, 3057
SmlI	CTYRAG	4 cut(s)	443, 452, 672, 1142
SmoI	CTYRAG	4 cut(s)	443, 452, 672, 1142
SphI	GCATGC	1 cut(s)	1798
SsiI	CCGC	1 cut(s)	629
SspI	AATATT	2 cut(s)	1228, 2602
SstI	GAGCTC	2 cut(s)	852, 2245
StyD4I	CCNGG	7 cut(s)	58, 843, 1162, 1690, 2287, 3115, 3151
StyI	CCWWGG	3 cut(s)	485, 1511, 1582
TaaI	ACNGT	3 cut(s)	2053, 2250, 2852
TaiI	ACGT	6 cut(s)	436, 829, 911, 1251, 1357, 2267
TaqI	TCGA	4 cut(s)	146, 867, 3185, 3194
TaqII	GACCGA	1 cut(s)	2470
TatI	WGTACW	1 cut(s)	581
TfiI	GAWTC	7 cut(s)	668, 1090, 1929, 2174, 2213, 2225, 2620
Tru1I	TTAA	9 cut(s)	341, 444, 737, 837, 1143, 1223, 1254, 1548, 1761
Tru9I	TTAA	9 cut(s)	341, 444, 737, 837, 1143, 1223, 1254, 1548, 1761
TscAI	CASTG	9 cut(s)	385, 604, 1579, 1645, 2069, 2253, 2389, 2664, 3231
TseFI	GTSAC	3 cut(s)	130, 2193, 3123
TseI	GCWGC	6 cut(s)	761, 1184, 1454, 1802, 1886, 2059
Tsp45I	GTSAC	3 cut(s)	130, 2193, 3123
TspDTI	ATGAA	7 cut(s)	231, 762, 896, 1223, 1920, 1956, 3216
TspGWI	ACGGA	4 cut(s)	506, 780, 926, 2290
TspRI	CASTG	9 cut(s)	385, 604, 1579, 1645, 2069, 2253, 2389, 2664, 3231
Van91I	CCANNNNNTGG	1 cut(s)	2237
Vha464I	CTTAAG	2 cut(s)	443, 1142
VneI	GTGCAC	1 cut(s)	3156
VpaK11BI	GGWCC	2 cut(s)	1718, 1778
VspI	ATTAAT	1 cut(s)	1254
XagI	CCTNNNNNAGG	2 cut(s)	1814, 3244
XapI	RAATTY	6 cut(s)	659, 1524, 1708, 1770, 2323, 3203
XmiI	GTMKAC	1 cut(s)	2820
Zsp2I	ATGCAT	1 cut(s)	1009

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.