FvH4_2g40460

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000864
Physical Location & Seq
Forward (+)
28805878 .. 28810289
4412 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40460.t1

Sequence Viewer

Length: 1854 bp
ATGAACAATCTGCACTATGCGAGCGACGAAGAAGCAGATGAGAATCTGCAGTATCAGTATGAGAGGGATGAAGAAGCAGATGATGAGGTAGGGGGAGATTATCCAGTAGATTACGATGTCGATGAGTATGGTGAGACTCTGCGGGAGAAAAATCATACTCTTATGAATGAAGAAGAAATTGCCAAACTTGAGGAGGACTATATTACAAAAGTGTCGACTGTCCTTTCTATATCTGTTTCTTATGCATGCTTGCTACTCCCTCACTTTAATTGGAGGGTTAATGATCTACAGGATGAATGGTTTGCTGATGAGGATAAAGTTCGAGACAGGGTAGGCTTGTTGAAGAAGCCAGTAGTCGACCATAGTGCCGCCGGAGATCTGAAACCAACTTGTGGAATATGTTTTGATGAGTACGACTATTCATCCACCGGTAGTGTTAGCAGTATTTTGACAGCCTCTTGTGGCCATCCTTACTGTCGTGATTGCTTGGCAGGTTATATCAGCACATCGATCAATGACCGTGGTCCTGCCTGTTTGATGCTCAGGTGTCCTGAACCGAAATGCAGCGCTGCAATTGGTCCGGATTTAATCCAAAATGTGTTGCTGATGTCAGAGAAGAAGGAAAAGGACTTGTATGACAAGTACAAGCGCTACCTGTTAAGATCTTATGTCGAAAATCACAAGAAGATCAAATGGTGTCCTGCTCCTAACTGCGAGTACGCCATTCATTTTGATGGTGTGGGGGAAATGGTGTCATATGATGTATCGTGTGCTTGTTCTCGTAAATATTGTTGGAATTGCACAGAGGAGAGTCATCGTCCTGTGGACTGCAAGACTGTTAAGAAATGGCTTTTGAAAAACCAGGATGATTCTCAGAATGGGAAGTGGATAATGGTCAATACAAAGCCTTGTCCCAAGTGCAACAGATCAATTGAAAAGAACTTAGGGTGTAATCATATGACCTGCAGAGCCCCTTGTCGGTATGAATTTTGCTGGTACTGTCTCGGTCCAATCAGATCAGGTTGCCATTGCAATGGATTTTCTAGAGTTAAATCTGATAAGGTGAACGTAGCTGAGATTGATAGAAGGAAAGCAAAGAGAGACTTAGAGAGATACATTCATTACTATGAGCGCTGGGCAAACAATGAAAGATCAAAGATAAAAGCTATAGAGGATTTCGAGAAGGTTAAAACATTGCACATTGGAAAACTTGGAGACCTACAAGAGAATACAGTAGAGCATTTATATAATTTCATTATAGATGCTTGGCAACAGATAATTGAGTGCAGGCAGGTACTGCGGTGGACATTTGTCTATGGCTATTACTTGAGTGAGGAGGAAGAGCAGACTAAGCAGGATTTTTTCGAGTGGTTGCAAGGTCATGCTGAATACAGCCTCGAGCAGCTTCACAACTGTGCTGAGACTGAACTGCATTCGTTTCTGGACTCGCCTAATGACATCAAGGACTCCAAATTCATAAACTTCAAGAGAAATCTTACAAGCTTAACAAAGGTGACCGGGAATTACTTTAACAAGCTGGCTAGAGCGTTGGAGGAGGGACTTCCAGAGGTAATGATCGCATCAGGAACAAAAAACAGAAAGCGCCTTCCAGAGACTGAGATTGAATCAGGAACAAAGAAAAAAATGCGCCAGGATGGGACCGCTTCTTCCAGCACTAACACAAGTCATGACTACGAGGAGGATAGTTGGTCTTGTCCGGATTGTACCTATGTAAATCCAGAAACTACCCGCAAGTGTCTGATGTGTTCTCCGGATTGGTTTTGTGGTAGCTGTACCTATCGAAATCCAGCTTCTTCAGTGAGGTGTGAGATGTGCAATAATGCTGAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RanBP

Protein Analysis

618

Amino Acids

71.42

Weight (kDa)

5.36

Isoelectric Point (pI)

54.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_ARI1 PF21235 66 - 101 3.5e-07 E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR PF01485 213 - 277 1.1e-15 IBR domain, a half RING-finger domain
IBR_2 PF22605 297 - 342 1.6e-09 IBR domain
IBR_1 PF22191 300 - 338 7.8e-11 IBR domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 482, 971, 1282
AccB7I CCANNNNNTGG 1 cut(s) 392
AccI GTMKAC 2 cut(s) 215, 357
AccIII TCCGGA 3 cut(s) 580, 1717, 1771
AciI CCGC 5 cut(s) 142, 369, 1300, 1662, 1750
AcoI YGGCCR 1 cut(s) 463
AcsI RAATTY 2 cut(s) 986, 1472
AcuI CTGAAG 1 cut(s) 1800
AfaI GTAC 7 cut(s) 413, 644, 719, 998, 1296, 1726, 1795
AfeI AGCGCT 3 cut(s) 568, 650, 1133
AfiI CCNNNNNNNGG 2 cut(s) 392, 978
AgeI ACCGGT 1 cut(s) 428
AgsI TTSAA 5 cut(s) 343, 856, 935, 1486, 1625
AjnI CCWGG 2 cut(s) 861, 1650
AleI CACNNNNGTG 1 cut(s) 1413
AluBI AGCT 7 cut(s) 1073, 1166, 1405, 1503, 1537, 1791, 1811
AluI AGCT 7 cut(s) 1073, 1166, 1405, 1503, 1537, 1791, 1811
Alw26I GTCTC 7 cut(s) 128, 318, 1007, 1095, 1209, 1415, 1607
AlwNI CAGNNNCTG 2 cut(s) 1297, 1616
Ama87I CYCGRG 1 cut(s) 1397
Aor13HI TCCGGA 3 cut(s) 580, 1717, 1771
Aor51HI AGCGCT 3 cut(s) 568, 650, 1133
AoxI GGCC 1 cut(s) 463
ApeKI GCWGC 3 cut(s) 564, 569, 1402
ApoI RAATTY 2 cut(s) 986, 1472
AsiGI ACCGGT 1 cut(s) 428
AspLEI GCGC 5 cut(s) 569, 651, 1134, 1605, 1650
AspS9I GGNCC 4 cut(s) 524, 578, 1007, 1659
AsuC2I CCSGG 1 cut(s) 1519
AsuHPI GGTGA 3 cut(s) 143, 1075, 1525
AvaI CYCGRG 1 cut(s) 1397
AvaII GGWCC 4 cut(s) 524, 578, 1007, 1659
BaeI ACNNNNGTAYC 2 cut(s) 1286, 1319
BalI TGGCCA 1 cut(s) 465
BanII GRGCYC 1 cut(s) 973
BbvI GCAGC 3 cut(s) 556, 576, 1414
BccI CCATC 3 cut(s) 474, 728, 1649
BcgI CGANNNNNNTGC 2 cut(s) 347, 381
BciT130I CCWGG 2 cut(s) 863, 1652
BcnI CCSGG 1 cut(s) 1519
BcoDI GTCTC 7 cut(s) 128, 318, 1007, 1095, 1209, 1415, 1607
BfaI CTAG 2 cut(s) 1044, 1542
BfmI CTRYAG 4 cut(s) 47, 287, 964, 1167
BfoI RGCGCY 4 cut(s) 570, 652, 1135, 1606
BfuAI ACCTGC 3 cut(s) 482, 971, 1282
BglII AGATCT 2 cut(s) 376, 662
BisI GCNGC 4 cut(s) 369, 565, 570, 1403
BlsI GCNGC 4 cut(s) 370, 566, 571, 1404
Bme1390I CCNGG 3 cut(s) 863, 1519, 1652
Bme18I GGWCC 4 cut(s) 524, 578, 1007, 1659
BmeT110I CYCGRG 1 cut(s) 1397
BmgT120I GGNCC 4 cut(s) 524, 578, 1007, 1659
BmiI GGNNCC 1 cut(s) 1660
BmrFI CCNGG 3 cut(s) 863, 1519, 1652
BmsI GCATC 3 cut(s) 528, 1252, 1589
BoxI GACNNNNGTC 2 cut(s) 522, 1310
Bpu10I CCTNAGC 1 cut(s) 542
BpuEI CTTGAG 2 cut(s) 209, 1348
BpuMI CCSGG 1 cut(s) 1519
Bsa29I ATCGAT 1 cut(s) 509
BsaBI GATNNNNATC 1 cut(s) 42
BsaI GGTCTC 1 cut(s) 1209
BsaJI CCNNGG 1 cut(s) 520
BsaWI WCCGGW 4 cut(s) 428, 580, 1717, 1771
Bsc4I CCNNNNNNNGG 2 cut(s) 392, 978
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 2 cut(s) 104, 350
Bse3DI GCAATG 3 cut(s) 1027, 1039, 1193
Bse8I GATNNNNATC 1 cut(s) 42
BseAI TCCGGA 3 cut(s) 580, 1717, 1771
BseBI CCWGG 2 cut(s) 863, 1652
BseCI ATCGAT 1 cut(s) 509
BseDI CCNNGG 1 cut(s) 520
BseGI GGATG 6 cut(s) 73, 298, 422, 466, 871, 1660
BseJI GATNNNNATC 1 cut(s) 42
BseLI CCNNNNNNNGG 2 cut(s) 392, 978
BseMI GCAATG 3 cut(s) 1027, 1039, 1193
BseMII CTCAG 5 cut(s) 556, 887, 1065, 1410, 1608
BseNI ACTGG 2 cut(s) 104, 350
BseRI GAGGAG 5 cut(s) 206, 821, 1349, 1568, 1712
BseXI GCAGC 3 cut(s) 556, 576, 1414
BseYI CCCAGC 1 cut(s) 1134
BsgI GTGCAG 1 cut(s) 1306
BshFI GGCC 1 cut(s) 465
BshTI ACCGGT 1 cut(s) 428
BshVI ATCGAT 1 cut(s) 509
BsiHKCI CYCGRG 1 cut(s) 1397
BsiSI CCGG 6 cut(s) 372, 429, 581, 1518, 1718, 1772
BslFI GGGAC 3 cut(s) 897, 1572, 1672
BslI CCNNNNNNNGG 2 cut(s) 392, 978
BsmAI GTCTC 7 cut(s) 128, 318, 1007, 1095, 1209, 1415, 1607
BsmFI GGGAC 3 cut(s) 897, 1572, 1672
BsmI GAATGC 1 cut(s) 1432
BsnI GGCC 1 cut(s) 465
Bso31I GGTCTC 1 cut(s) 1209
BsoBI CYCGRG 1 cut(s) 1397
Bsp1286I GDGCHC 1 cut(s) 973
Bsp13I TCCGGA 3 cut(s) 580, 1717, 1771
Bsp143I GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
BspACI CCGC 5 cut(s) 142, 369, 1300, 1662, 1750
BspANI GGCC 1 cut(s) 465
BspCNI CTCAG 5 cut(s) 555, 886, 1066, 1411, 1609
BspDI ATCGAT 1 cut(s) 509
BspEI TCCGGA 3 cut(s) 580, 1717, 1771
BspHI TCATGA 1 cut(s) 1687
BspLI GGNNCC 1 cut(s) 1660
BspMAI CTGCAG 2 cut(s) 51, 968
BspMI ACCTGC 3 cut(s) 482, 971, 1282
BspQI GCTCTTC 1 cut(s) 1335
BspTNI GGTCTC 1 cut(s) 1209
BsrDI GCAATG 3 cut(s) 1027, 1039, 1193
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 2 cut(s) 104, 350
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 1 cut(s) 520
BssMI GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
Bst2UI CCWGG 2 cut(s) 863, 1652
Bst4CI ACNGT 7 cut(s) 220, 476, 521, 838, 1001, 1234, 1415
Bst6I CTCTTC 1 cut(s) 1335
BstAPI GCANNNNNTGC 1 cut(s) 1297
BstC8I GCNNGC 5 cut(s) 22, 247, 251, 1289, 1539
BstDEI CTNAG 8 cut(s) 542, 873, 943, 1074, 1105, 1350, 1419, 1617
BstDSI CCRYGG 1 cut(s) 520
BstEII GGTNACC 1 cut(s) 1513
BstF5I GGATG 6 cut(s) 73, 298, 422, 466, 871, 1660
BstH2I RGCGCY 4 cut(s) 570, 652, 1135, 1606
BstHHI GCGC 5 cut(s) 569, 651, 1134, 1605, 1650
BstKTI GATC 9 cut(s) 286, 379, 513, 665, 690, 929, 1019, 1154, 1578
BstMAI GTCTC 7 cut(s) 128, 318, 1007, 1095, 1209, 1415, 1607
BstMBI GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
BstMWI GCNNNNNNNGC 2 cut(s) 1297, 1351
BstNI CCWGG 2 cut(s) 863, 1652
BstNSI RCATGY 1 cut(s) 249
BstPAI GACNNNNGTC 2 cut(s) 522, 1310
BstPI GGTNACC 1 cut(s) 1513
BstSCI CCNGG 3 cut(s) 861, 1517, 1650
BstSFI CTRYAG 4 cut(s) 47, 287, 964, 1167
BstV1I GCAGC 3 cut(s) 556, 576, 1414
BstX2I RGATCY 2 cut(s) 376, 662
BstXI CCANNNNNNTGG 1 cut(s) 1034
BstYI RGATCY 2 cut(s) 376, 662
Bsu15I ATCGAT 1 cut(s) 509
BsuRI GGCC 1 cut(s) 465
BsuTUI ATCGAT 1 cut(s) 509
BtgI CCRYGG 1 cut(s) 520
BtsCI GGATG 6 cut(s) 73, 298, 422, 466, 871, 1660
BtsIMutI CAGTG 1 cut(s) 1824
BveI ACCTGC 3 cut(s) 482, 971, 1282
Cac8I GCNNGC 5 cut(s) 22, 247, 251, 1289, 1539
CaiI CAGNNNCTG 2 cut(s) 1297, 1616
CciI TCATGA 1 cut(s) 1687
CfoI GCGC 5 cut(s) 569, 651, 1134, 1605, 1650
Cfr10I RCCGGY 1 cut(s) 428
Cfr13I GGNCC 4 cut(s) 524, 578, 1007, 1659
ClaI ATCGAT 1 cut(s) 509
Csp6I GTAC 7 cut(s) 412, 643, 718, 997, 1295, 1725, 1794
CspAI ACCGGT 1 cut(s) 428
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviAII CATG 3 cut(s) 246, 1382, 1688
CviQI GTAC 7 cut(s) 412, 643, 718, 997, 1295, 1725, 1794
DdeI CTNAG 8 cut(s) 542, 873, 943, 1074, 1105, 1350, 1419, 1617
DpnI GATC 9 cut(s) 285, 378, 512, 664, 689, 928, 1018, 1153, 1577
DpnII GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
EaeI YGGCCR 1 cut(s) 463
Eam1104I CTCTTC 1 cut(s) 1335
EarI CTCTTC 1 cut(s) 1335
Eco24I GRGCYC 1 cut(s) 973
Eco31I GGTCTC 1 cut(s) 1209
Eco47I GGWCC 4 cut(s) 524, 578, 1007, 1659
Eco47III AGCGCT 3 cut(s) 568, 650, 1133
Eco57I CTGAAG 1 cut(s) 1800
Eco88I CYCGRG 1 cut(s) 1397
Eco91I GGTNACC 1 cut(s) 1513
EcoO65I GGTNACC 1 cut(s) 1513
EcoRII CCWGG 2 cut(s) 861, 1650
EcoT22I ATGCAT 1 cut(s) 247
EcoT38I GRGCYC 1 cut(s) 973
FaeI CATG 3 cut(s) 249, 1385, 1691
FalI AAGNNNNNCTT 2 cut(s) 1088, 1120
FaqI GGGAC 3 cut(s) 897, 1572, 1672
FatI CATG 3 cut(s) 245, 1381, 1687
FauI CCCGC 2 cut(s) 135, 1757
FauNDI CATATG 2 cut(s) 757, 957
FblI GTMKAC 2 cut(s) 215, 357
Fnu4HI GCNGC 4 cut(s) 369, 565, 570, 1403
FokI GGATG 6 cut(s) 80, 305, 409, 453, 878, 1667
FriOI GRGCYC 1 cut(s) 973
Fsp4HI GCNGC 4 cut(s) 369, 565, 570, 1403
FspBI CTAG 2 cut(s) 1044, 1542
GlaI GCGC 5 cut(s) 568, 650, 1133, 1604, 1649
GluI GCNGC 4 cut(s) 369, 565, 570, 1403
GsaI CCCAGC 1 cut(s) 1138
HaeII RGCGCY 4 cut(s) 570, 652, 1135, 1606
HaeIII GGCC 1 cut(s) 465
HapII CCGG 6 cut(s) 372, 429, 581, 1518, 1718, 1772
HhaI GCGC 5 cut(s) 569, 651, 1134, 1605, 1650
Hin1II CATG 3 cut(s) 249, 1385, 1691
Hin6I GCGC 5 cut(s) 567, 649, 1132, 1603, 1648
HinP1I GCGC 5 cut(s) 567, 649, 1132, 1603, 1648
HincII GTYRAC 2 cut(s) 216, 358
HindII GTYRAC 2 cut(s) 216, 358
HindIII AAGCTT 1 cut(s) 1501
HinfI GANTC 7 cut(s) 43, 136, 811, 869, 1445, 1466, 1625
HpaII CCGG 6 cut(s) 372, 429, 581, 1518, 1718, 1772
HphI GGTGA 3 cut(s) 143, 1075, 1525
Hpy166II GTNNAC 5 cut(s) 216, 358, 826, 1066, 1305
Hpy188I TCNGA 6 cut(s) 381, 613, 876, 1016, 1057, 1761
Hpy8I GTNNAC 5 cut(s) 216, 358, 826, 1066, 1305
Hpy99I CGWCG 1 cut(s) 29
HpyAV CCTTC 4 cut(s) 613, 1080, 1177, 1616
HpyCH4III ACNGT 7 cut(s) 220, 476, 521, 838, 1001, 1234, 1415
HpyCH4IV ACGT 1 cut(s) 1068
HpyF10VI GCNNNNNNNGC 2 cut(s) 1297, 1351
HpyF3I CTNAG 8 cut(s) 542, 873, 943, 1074, 1105, 1350, 1419, 1617
HpySE526I ACGT 1 cut(s) 1068
Hsp92II CATG 3 cut(s) 249, 1385, 1691
HspAI GCGC 5 cut(s) 567, 649, 1132, 1603, 1648
Kpn2I TCCGGA 3 cut(s) 580, 1717, 1771
Kzo9I GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
LguI GCTCTTC 1 cut(s) 1335
LmnI GCTCC 1 cut(s) 709
Lsp1109I GCAGC 3 cut(s) 556, 576, 1414
LweI GCATC 3 cut(s) 528, 1252, 1589
MaeI CTAG 2 cut(s) 1044, 1542
MaeII ACGT 1 cut(s) 1068
MaeIII GTNAC 1 cut(s) 1513
MalI GATC 9 cut(s) 285, 378, 512, 664, 689, 928, 1018, 1153, 1577
MboI GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
MfeI CAATTG 2 cut(s) 573, 930
MflI RGATCY 2 cut(s) 376, 662
MhlI GDGCHC 1 cut(s) 973
MlsI TGGCCA 1 cut(s) 465
MluNI TGGCCA 1 cut(s) 465
MlyI GAGTC 4 cut(s) 130, 820, 1439, 1460
MmeI TCCRAC 2 cut(s) 773, 1530
Mox20I TGGCCA 1 cut(s) 465
Mph1103I ATGCAT 1 cut(s) 247
MroI TCCGGA 3 cut(s) 580, 1717, 1771
MscI TGGCCA 1 cut(s) 465
MseI TTAA 9 cut(s) 267, 279, 587, 659, 840, 1050, 1188, 1505, 1530
MslI CAYNNNNRTG 4 cut(s) 732, 1032, 1125, 1413
Msp20I TGGCCA 1 cut(s) 465
MspI CCGG 6 cut(s) 372, 429, 581, 1518, 1718, 1772
MspR9I CCNGG 3 cut(s) 863, 1519, 1652
MunI CAATTG 2 cut(s) 573, 930
Mva1269I GAATGC 1 cut(s) 1432
MvaI CCWGG 2 cut(s) 863, 1652
MwoI GCNNNNNNNGC 2 cut(s) 1297, 1351
NciI CCSGG 1 cut(s) 1519
NdeI CATATG 2 cut(s) 757, 957
NdeII GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
NlaIII CATG 3 cut(s) 249, 1385, 1691
NlaIV GGNNCC 1 cut(s) 1660
NmuCI GTSAC 1 cut(s) 1513
NsiI ATGCAT 1 cut(s) 247
NspI RCATGY 1 cut(s) 249
OliI CACNNNNGTG 1 cut(s) 1413
PaeI GCATGC 1 cut(s) 249
PaeR7I CTCGAG 1 cut(s) 1397
PagI TCATGA 1 cut(s) 1687
PciSI GCTCTTC 1 cut(s) 1335
PctI GAATGC 1 cut(s) 1432
PfeI GAWTC 3 cut(s) 43, 869, 1625
PflMI CCANNNNNTGG 1 cut(s) 392
PinAI ACCGGT 1 cut(s) 428
PkrI GCNGC 4 cut(s) 370, 566, 571, 1404
PleI GAGTC 4 cut(s) 130, 819, 1439, 1460
PpsI GAGTC 4 cut(s) 130, 819, 1439, 1460
PshAI GACNNNNGTC 2 cut(s) 522, 1310
Psp6I CCWGG 2 cut(s) 861, 1650
PspEI GGTNACC 1 cut(s) 1513
PspFI CCCAGC 1 cut(s) 1134
PspGI CCWGG 2 cut(s) 861, 1650
PspN4I GGNNCC 1 cut(s) 1660
PspPI GGNCC 4 cut(s) 524, 578, 1007, 1659
PspXI VCTCGAGB 1 cut(s) 1397
PstI CTGCAG 2 cut(s) 51, 968
PstNI CAGNNNCTG 2 cut(s) 1297, 1616
PsuI RGATCY 2 cut(s) 376, 662
RsaI GTAC 7 cut(s) 413, 644, 719, 998, 1296, 1726, 1795
RsaNI GTAC 7 cut(s) 412, 643, 718, 997, 1295, 1725, 1794
RseI CAYNNNNRTG 4 cut(s) 732, 1032, 1125, 1413
SalI GTCGAC 2 cut(s) 214, 356
SapI GCTCTTC 1 cut(s) 1335
SaqAI TTAA 9 cut(s) 267, 279, 587, 659, 840, 1050, 1188, 1505, 1530
SatI GCNGC 4 cut(s) 369, 565, 570, 1403
Sau3AI GATC 9 cut(s) 283, 376, 510, 662, 687, 926, 1016, 1151, 1575
Sau96I GGNCC 4 cut(s) 524, 578, 1007, 1659
SchI GAGTC 4 cut(s) 130, 820, 1439, 1460
ScrFI CCNGG 3 cut(s) 863, 1519, 1652
SduI GDGCHC 1 cut(s) 973
SfaNI GCATC 3 cut(s) 528, 1252, 1589
SfcI CTRYAG 4 cut(s) 47, 287, 964, 1167
Sfr274I CTCGAG 1 cut(s) 1397
SinI GGWCC 4 cut(s) 524, 578, 1007, 1659
SlaI CTCGAG 1 cut(s) 1397
SmiMI CAYNNNNRTG 4 cut(s) 732, 1032, 1125, 1413
SmlI CTYRAG 3 cut(s) 188, 1327, 1397
SmoI CTYRAG 3 cut(s) 188, 1327, 1397
SphI GCATGC 1 cut(s) 249
SsiI CCGC 5 cut(s) 142, 369, 1300, 1662, 1750
SspI AATATT 1 cut(s) 788
SspMI CTAG 2 cut(s) 1044, 1542
StyD4I CCNGG 3 cut(s) 861, 1517, 1650
TaaI ACNGT 7 cut(s) 220, 476, 521, 838, 1001, 1234, 1415
TaiI ACGT 1 cut(s) 1071
TaqII GACCGA 1 cut(s) 995
TatI WGTACW 1 cut(s) 642
TauI GCSGC 1 cut(s) 371
TfiI GAWTC 3 cut(s) 43, 869, 1625
Tru1I TTAA 9 cut(s) 267, 279, 587, 659, 840, 1050, 1188, 1505, 1530
Tru9I TTAA 9 cut(s) 267, 279, 587, 659, 840, 1050, 1188, 1505, 1530
TscAI CASTG 1 cut(s) 1824
TseFI GTSAC 1 cut(s) 1513
TseI GCWGC 3 cut(s) 564, 569, 1402
Tsp45I GTSAC 1 cut(s) 1513
TspRI CASTG 1 cut(s) 1824
Van91I CCANNNNNTGG 1 cut(s) 392
VpaK11BI GGWCC 4 cut(s) 524, 578, 1007, 1659
XapI RAATTY 2 cut(s) 986, 1472
XbaI TCTAGA 1 cut(s) 1043
XceI RCATGY 1 cut(s) 249
XhoI CTCGAG 1 cut(s) 1397
XmiI GTMKAC 2 cut(s) 215, 357
XspI CTAG 2 cut(s) 1044, 1542
Zsp2I ATGCAT 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.