RchiOBHm_Chr6g0300261

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000864
Physical Location & Seq
Reverse (-)
61159448 .. 61161341
1894 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26964

Sequence Viewer

Length: 1512 bp
ATGGATGACACAGACTACATGAACGATGACAACTACTACGACGACGACGACGACGGCTTTAGCGATTGTGACGACGACGATGATGATCAGTCGATTGAAGAGGAATCAAATGATCGGCAAAACTACACTGTTCTGAAAGAAGAAGAGATTGCCAAGCTTCAAGAGGATGCTATCACTGAAGTGTCTGCTGTACTATCAATATCGCAATCCGCTGCCTGCTTCGTCCTCACTCAGTTCAACTGGAACGTGATCAATCTCAACGACGAGTGGTTCGCCGATGAAGATAGGATCCGGCAAAAGGTAGGTCTGTTGGAGCAGCCTGTGGTTCAATTCAATCCGAAAAACCAAAGAACTATTTGCGGTATATGTTTTGAGGTGTATGGCTATGGATCGATGTATTCGGCCGCCTGCGGTCATCGTTATTGTGGAGAGTGCTGGAGGGGTTACATCAGCACAGCGATCAAGGATGGCCCCGCGTGTTTGATGCTGAGGTGTCCCGAACCGCCGTGTAGGGCGGCGGTTGGTCCTGATTTGATCTCGGTCTTGGTGTCGAAACAGGAGTACGAGAGGTACAGGCACTACCTTTTGAGATCGTACGTCGAACAGCAGACCAAGATCAAGTGGTGTCCCGCCCCGGATTGTAAGTACGCTGTTAGGTTCGATAGTTATGAGACCAGAAGCTATGATGTTTCGTGTCTTTGTTCGCATAGCTATTGCTGGAATTGTACGGAGGAGAGTCACCGTCCGGTGGACTGTGAGACGGTGAGGAAGTGGATTATGAAGAACAAGGACAGCTCGCAAAATGCGCAGTGGATATTGGTTAACACCAAGCCTTGTCCAAAGTGCAAGAGACCAATTCAGAAGAACCAAGGGTGTCACCACATGACTTGCTCAGCTCCTTGTAGGTATGAGTTTTGCTGGTATTGTCTTGCGAAATTCGAAAGTTATTCTACTAGATGTTGTAACGCGTATAGGGCGAATACTGATGAGCTCAAGGAGTTGGATTTGGAGCCGGATCAGAAGAAGCTGAAGGAGTATTTAGATAGGTATCTTCATTATTATGAGCGATGGGCAAACAATCAGTCTTCGAAGGAAAAGGCTGTCGAGTCTTTAGAGGAGGTGCGAACCAAGCACATTATGGAGCTTATTAGGAAACAACAGTATCTGTCTGAGCTTGAACTCAATTTCATCATAGATGCATGGCAACAGATAATTGAATGTAGGCAGGTGCTGCGGTGGAGCTATGCGTATGGCTACTACATGCCTGAGGATGAGCGTCTTAAGGCTGATCTGTTTGAGCACTTGCAAGGTCATGCAGAGTACAGCCTCGAGAGGCTTCACAAATGCGCCGAGACTGAATTGCAACCATATCTGGCTTCTGAGGTAGAATTAAAGGAGAGCTTCCACGCATTTCGCTTAAAACTTGAAAATATGACGAGGGCCACTAAAGATTATTTCAGGAAGCTGGTTACAGCCTTGGAGAATGGCCTTTCGGAGGTGGACGGCGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
IBR zf-RanBP

Protein Analysis

503

Amino Acids

59.23

Weight (kDa)

4.98

Isoelectric Point (pI)

53.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_ARI1 PF21235 53 - 91 1.5e-07 E3 ubiquitin-protein ligase ARIH1, UBA-like domain
IBR PF01485 189 - 252 5.4e-16 IBR domain, a half RING-finger domain
IBR_2 PF22605 272 - 314 6.3e-10 IBR domain
IBR_1 PF22191 275 - 314 2.1e-11 IBR domain
Ariadne PF19422 349 - 497 3.7e-07 Ariadne domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1216
Acc16I TGCGCA 1 cut(s) 807
Acc36I ACCTGC 1 cut(s) 1216
AccII CGCG 2 cut(s) 476, 968
AclWI GGATC 4 cut(s) 283, 296, 397, 1023
AcoI YGGCCR 1 cut(s) 402
AcsI RAATTY 1 cut(s) 935
AcuI CTGAAG 2 cut(s) 198, 1049
AfaI GTAC 7 cut(s) 192, 563, 572, 596, 647, 727, 1322
AfiI CCNNNNNNNGG 3 cut(s) 298, 748, 1495
AflII CTTAAG 1 cut(s) 1280
AflIII ACRYGT 1 cut(s) 966
AgsI TTSAA 8 cut(s) 98, 161, 238, 329, 334, 1178, 1217, 1427
AleI CACNNNNGTG 1 cut(s) 179
Alw21I GWGCWC 2 cut(s) 993, 1302
Alw26I GTCTC 4 cut(s) 665, 752, 844, 1346
AlwI GGATC 4 cut(s) 283, 296, 397, 1023
AlwNI CAGNNNCTG 2 cut(s) 1165, 1231
Ama87I CYCGRG 1 cut(s) 1328
AoxI GGCC 4 cut(s) 402, 469, 1440, 1486
ApeKI GCWGC 3 cut(s) 212, 316, 1231
ApoI RAATTY 1 cut(s) 935
ArsI GACNNNNNNTTYG 6 cut(s) 254, 286, 289, 321, 1067, 1099
AspLEI GCGC 2 cut(s) 808, 1349
AspS9I GGNCC 3 cut(s) 470, 524, 1440
AsuC2I CCSGG 1 cut(s) 635
AsuHPI GGTGA 3 cut(s) 731, 775, 869
AsuII TTCGAA 2 cut(s) 939, 1088
AvaI CYCGRG 1 cut(s) 1328
AvaII GGWCC 1 cut(s) 524
AxyI CCTNAGG 1 cut(s) 1266
BaeI ACNNNNGTAYC 2 cut(s) 1145, 1178
BamHI GGATCC 1 cut(s) 288
BanII GRGCYC 1 cut(s) 993
BbsI GAAGAC 1 cut(s) 1077
Bbv12I GWGCWC 2 cut(s) 993, 1302
BbvCI CCTCAGC 1 cut(s) 488
BbvI GCAGC 3 cut(s) 199, 328, 1218
BccI CCATC 2 cut(s) 461, 1062
BceAI ACGGC 2 cut(s) 70, 490
BclI TGATCA 2 cut(s) 85, 249
BcnI CCSGG 1 cut(s) 635
BcoDI GTCTC 4 cut(s) 665, 752, 844, 1346
BfaI CTAG 1 cut(s) 954
BfrI CTTAAG 1 cut(s) 1280
BfuAI ACCTGC 1 cut(s) 1216
BisI GCNGC 5 cut(s) 213, 317, 405, 516, 1232
BlpI GCTNAGC 1 cut(s) 892
BlsI GCNGC 5 cut(s) 214, 318, 406, 517, 1233
Bme1390I CCNGG 1 cut(s) 635
Bme18I GGWCC 1 cut(s) 524
BmeT110I CYCGRG 1 cut(s) 1328
BmgT120I GGNCC 3 cut(s) 470, 524, 1440
BmiI GGNNCC 3 cut(s) 290, 472, 1011
BmrFI CCNGG 1 cut(s) 635
BmsI GCATC 3 cut(s) 157, 474, 1186
BpiI GAAGAC 1 cut(s) 1077
BpmI CTGGAG 1 cut(s) 457
Bpu10I CCTNAGC 1 cut(s) 488
Bpu1102I GCTNAGC 1 cut(s) 892
Bpu14I TTCGAA 2 cut(s) 939, 1088
BpuEI CTTGAG 1 cut(s) 977
BpuMI CCSGG 1 cut(s) 635
Bsa29I ATCGAT 1 cut(s) 392
BsaBI GATNNNNATC 2 cut(s) 84, 1047
BsaI GGTCTC 2 cut(s) 665, 844
BsaJI CCNNGG 3 cut(s) 633, 868, 1476
BsaWI WCCGGW 1 cut(s) 745
Bsc4I CCNNNNNNNGG 3 cut(s) 298, 748, 1495
Bse1I ACTGG 1 cut(s) 245
Bse21I CCTNAGG 1 cut(s) 1266
Bse8I GATNNNNATC 2 cut(s) 84, 1047
BseCI ATCGAT 1 cut(s) 392
BseDI CCNNGG 3 cut(s) 633, 868, 1476
BseGI GGATG 4 cut(s) 10, 172, 472, 1276
BseJI GATNNNNATC 2 cut(s) 84, 1047
BseLI CCNNNNNNNGG 3 cut(s) 298, 748, 1495
BseMII CTCAG 6 cut(s) 245, 479, 906, 1161, 1257, 1371
BseNI ACTGG 1 cut(s) 245
BseRI GAGGAG 2 cut(s) 746, 1130
BseX3I CGGCCG 1 cut(s) 402
BseXI GCAGC 3 cut(s) 199, 328, 1218
Bsh1236I CGCG 2 cut(s) 476, 968
Bsh1285I CGRYCG 1 cut(s) 405
BshFI GGCC 4 cut(s) 404, 471, 1442, 1488
BshVI ATCGAT 1 cut(s) 392
BsiEI CGRYCG 1 cut(s) 405
BsiHKAI GWGCWC 2 cut(s) 993, 1302
BsiHKCI CYCGRG 1 cut(s) 1328
BsiSI CCGG 4 cut(s) 292, 635, 746, 1013
BsiWI CGTACG 1 cut(s) 594
BslFI GGGAC 2 cut(s) 480, 612
BslI CCNNNNNNNGG 3 cut(s) 298, 748, 1495
BsmAI GTCTC 4 cut(s) 665, 752, 844, 1346
BsmBI CGTCTC 1 cut(s) 752
BsmFI GGGAC 2 cut(s) 480, 612
BsnI GGCC 4 cut(s) 404, 471, 1442, 1488
Bso31I GGTCTC 2 cut(s) 665, 844
BsoBI CYCGRG 1 cut(s) 1328
Bsp119I TTCGAA 2 cut(s) 939, 1088
Bsp1286I GDGCHC 2 cut(s) 993, 1302
Bsp1720I GCTNAGC 1 cut(s) 892
BspANI GGCC 4 cut(s) 404, 471, 1442, 1488
BspCNI CTCAG 6 cut(s) 244, 480, 905, 1162, 1258, 1372
BspDI ATCGAT 1 cut(s) 392
BspFNI CGCG 2 cut(s) 476, 968
BspLI GGNNCC 3 cut(s) 290, 472, 1011
BspMI ACCTGC 1 cut(s) 1216
BspPI GGATC 4 cut(s) 283, 296, 397, 1023
BspT104I TTCGAA 2 cut(s) 939, 1088
BspTI CTTAAG 1 cut(s) 1280
BspTNI GGTCTC 2 cut(s) 665, 844
BsrI ACTGG 1 cut(s) 245
BssECI CCNNGG 3 cut(s) 633, 868, 1476
BssT1I CCWWGG 2 cut(s) 868, 1476
Bst4CI ACNGT 5 cut(s) 130, 743, 755, 763, 1161
Bst6I CTCTTC 2 cut(s) 93, 138
BstAFI CTTAAG 1 cut(s) 1280
BstAPI GCANNNNNTGC 1 cut(s) 1231
BstBI TTCGAA 2 cut(s) 939, 1088
BstC8I GCNNGC 3 cut(s) 217, 409, 797
BstDEI CTNAG 6 cut(s) 231, 488, 892, 1170, 1266, 1380
BstENI CCTNNNNNAGG 1 cut(s) 1493
BstF5I GGATG 4 cut(s) 10, 172, 472, 1276
BstFNI CGCG 2 cut(s) 476, 968
BstHHI GCGC 2 cut(s) 808, 1349
BstMAI GTCTC 4 cut(s) 665, 752, 844, 1346
BstMCI CGRYCG 1 cut(s) 405
BstMWI GCNNNNNNNGC 4 cut(s) 805, 974, 1129, 1231
BstNSI RCATGY 1 cut(s) 1264
BstSCI CCNGG 1 cut(s) 633
BstUI CGCG 2 cut(s) 476, 968
BstV1I GCAGC 3 cut(s) 199, 328, 1218
BstV2I GAAGAC 1 cut(s) 1077
BstX2I RGATCY 1 cut(s) 288
BstYI RGATCY 1 cut(s) 288
BstZI CGGCCG 1 cut(s) 402
Bsu15I ATCGAT 1 cut(s) 392
Bsu36I CCTNAGG 1 cut(s) 1266
BsuRI GGCC 4 cut(s) 404, 471, 1442, 1488
BsuTUI ATCGAT 1 cut(s) 392
BtgZI GCGATG 1 cut(s) 1081
BtsCI GGATG 4 cut(s) 10, 172, 472, 1276
BtsI GCAGTG 1 cut(s) 815
BtsIMutI CAGTG 3 cut(s) 126, 174, 815
BveI ACCTGC 1 cut(s) 1216
Cac8I GCNNGC 3 cut(s) 217, 409, 797
CaiI CAGNNNCTG 2 cut(s) 1165, 1231
CfoI GCGC 2 cut(s) 808, 1349
Cfr13I GGNCC 3 cut(s) 470, 524, 1440
ClaI ATCGAT 1 cut(s) 392
CseI GACGC 1 cut(s) 1265
Csp6I GTAC 7 cut(s) 191, 562, 571, 595, 646, 726, 1321
CspCI CAANNNNNGTGG 2 cut(s) 869, 904
CviAII CATG 5 cut(s) 19, 883, 1200, 1261, 1313
CviQI GTAC 7 cut(s) 191, 562, 571, 595, 646, 726, 1321
DdeI CTNAG 6 cut(s) 231, 488, 892, 1170, 1266, 1380
EaeI YGGCCR 1 cut(s) 402
EagI CGGCCG 1 cut(s) 402
Eam1104I CTCTTC 2 cut(s) 93, 138
EarI CTCTTC 2 cut(s) 93, 138
Ecl136II GAGCTC 1 cut(s) 991
EclXI CGGCCG 1 cut(s) 402
Eco130I CCWWGG 2 cut(s) 868, 1476
Eco24I GRGCYC 1 cut(s) 993
Eco31I GGTCTC 2 cut(s) 665, 844
Eco47I GGWCC 1 cut(s) 524
Eco52I CGGCCG 1 cut(s) 402
Eco53kI GAGCTC 1 cut(s) 991
Eco57I CTGAAG 2 cut(s) 198, 1049
Eco81I CCTNAGG 1 cut(s) 1266
Eco88I CYCGRG 1 cut(s) 1328
EcoICRI GAGCTC 1 cut(s) 991
EcoNI CCTNNNNNAGG 1 cut(s) 1493
EcoT14I CCWWGG 2 cut(s) 868, 1476
EcoT22I ATGCAT 1 cut(s) 1201
EcoT38I GRGCYC 1 cut(s) 993
ErhI CCWWGG 2 cut(s) 868, 1476
Esp3I CGTCTC 1 cut(s) 752
FaeI CATG 5 cut(s) 22, 886, 1203, 1264, 1316
FalI AAGNNNNNCTT 2 cut(s) 1385, 1417
FaqI GGGAC 2 cut(s) 480, 612
FatI CATG 5 cut(s) 18, 882, 1199, 1260, 1312
FauI CCCGC 2 cut(s) 481, 637
FbaI TGATCA 2 cut(s) 85, 249
Fnu4HI GCNGC 5 cut(s) 213, 317, 405, 516, 1232
FokI GGATG 4 cut(s) 17, 179, 479, 1283
FriOI GRGCYC 1 cut(s) 993
Fsp4HI GCNGC 5 cut(s) 213, 317, 405, 516, 1232
FspBI CTAG 1 cut(s) 954
FspI TGCGCA 1 cut(s) 807
GlaI GCGC 2 cut(s) 807, 1348
GluI GCNGC 5 cut(s) 213, 317, 405, 516, 1232
GsuI CTGGAG 1 cut(s) 457
HaeIII GGCC 4 cut(s) 404, 471, 1442, 1488
HapII CCGG 4 cut(s) 292, 635, 746, 1013
HgaI GACGC 1 cut(s) 1265
HhaI GCGC 2 cut(s) 808, 1349
Hin1II CATG 5 cut(s) 22, 886, 1203, 1264, 1316
Hin6I GCGC 2 cut(s) 806, 1347
HinP1I GCGC 2 cut(s) 806, 1347
HincII GTYRAC 1 cut(s) 823
HindII GTYRAC 1 cut(s) 823
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 3 cut(s) 104, 736, 1106
HpaI GTTAAC 1 cut(s) 823
HpaII CCGG 4 cut(s) 292, 635, 746, 1013
HphI GGTGA 3 cut(s) 731, 775, 869
Hpy166II GTNNAC 3 cut(s) 751, 823, 1501
Hpy188I TCNGA 7 cut(s) 135, 339, 861, 1020, 1171, 1381, 1495
Hpy188III TCNNGA 5 cut(s) 161, 497, 527, 1330, 1459
Hpy8I GTNNAC 3 cut(s) 751, 823, 1501
Hpy99I CGWCG 9 cut(s) 44, 47, 50, 53, 56, 77, 80, 266, 602
HpyAV CCTTC 2 cut(s) 1024, 1084
HpyCH4III ACNGT 5 cut(s) 130, 743, 755, 763, 1161
HpyCH4IV ACGT 2 cut(s) 246, 597
HpyCH4V TGCA 5 cut(s) 846, 1199, 1306, 1316, 1363
HpyF10VI GCNNNNNNNGC 4 cut(s) 805, 974, 1129, 1231
HpyF3I CTNAG 6 cut(s) 231, 488, 892, 1170, 1266, 1380
HpySE526I ACGT 2 cut(s) 246, 597
Hsp92II CATG 5 cut(s) 22, 886, 1203, 1264, 1316
HspAI GCGC 2 cut(s) 806, 1347
Ksp22I TGATCA 2 cut(s) 85, 249
KspAI GTTAAC 1 cut(s) 823
LmnI GCTCC 5 cut(s) 313, 901, 1009, 1141, 1239
Lsp1109I GCAGC 3 cut(s) 199, 328, 1218
LweI GCATC 3 cut(s) 157, 474, 1186
MaeI CTAG 1 cut(s) 954
MaeII ACGT 2 cut(s) 246, 597
MaeIII GTNAC 6 cut(s) 68, 443, 737, 875, 962, 1468
MboII GAAGA 9 cut(s) 110, 152, 155, 293, 793, 874, 1033, 1043, 1077
MflI RGATCY 1 cut(s) 288
MhlI GDGCHC 2 cut(s) 993, 1302
MluCI AATT 8 cut(s) 329, 721, 855, 935, 1183, 1212, 1358, 1388
MluI ACGCGT 1 cut(s) 966
MlyI GAGTC 2 cut(s) 745, 1115
MmeI TCCRAC 2 cut(s) 291, 981
Mph1103I ATGCAT 1 cut(s) 1201
MseI TTAA 4 cut(s) 822, 1281, 1391, 1418
MslI CAYNNNNRTG 2 cut(s) 179, 1059
MspA1I CMGCKG 1 cut(s) 212
MspCI CTTAAG 1 cut(s) 1280
MspI CCGG 4 cut(s) 292, 635, 746, 1013
MspR9I CCNGG 1 cut(s) 635
MvnI CGCG 2 cut(s) 476, 968
MwoI GCNNNNNNNGC 4 cut(s) 805, 974, 1129, 1231
NciI CCSGG 1 cut(s) 635
NlaIII CATG 5 cut(s) 22, 886, 1203, 1264, 1316
NlaIV GGNNCC 3 cut(s) 290, 472, 1011
NmeAIII GCCGAG 1 cut(s) 1375
NmuCI GTSAC 3 cut(s) 68, 737, 875
NsbI TGCGCA 1 cut(s) 807
NsiI ATGCAT 1 cut(s) 1201
NspI RCATGY 1 cut(s) 1264
NspV TTCGAA 2 cut(s) 939, 1088
OliI CACNNNNGTG 1 cut(s) 179
PaeR7I CTCGAG 1 cut(s) 1328
PaqCI CACCTGC 1 cut(s) 1216
PcsI WCGNNNNNNNCGW 3 cut(s) 45, 48, 60
PfeI GAWTC 1 cut(s) 104
Pfl23II CGTACG 1 cut(s) 594
PkrI GCNGC 5 cut(s) 214, 318, 406, 517, 1233
PleI GAGTC 2 cut(s) 744, 1114
PpsI GAGTC 2 cut(s) 744, 1114
Psp124BI GAGCTC 1 cut(s) 993
PspLI CGTACG 1 cut(s) 594
PspN4I GGNNCC 3 cut(s) 290, 472, 1011
PspPI GGNCC 3 cut(s) 470, 524, 1440
PstNI CAGNNNCTG 2 cut(s) 1165, 1231
PsuI RGATCY 1 cut(s) 288
RsaI GTAC 7 cut(s) 192, 563, 572, 596, 647, 727, 1322
RsaNI GTAC 7 cut(s) 191, 562, 571, 595, 646, 726, 1321
RseI CAYNNNNRTG 2 cut(s) 179, 1059
SacI GAGCTC 1 cut(s) 993
SaqAI TTAA 4 cut(s) 822, 1281, 1391, 1418
SatI GCNGC 5 cut(s) 213, 317, 405, 516, 1232
Sau96I GGNCC 3 cut(s) 470, 524, 1440
SchI GAGTC 2 cut(s) 745, 1115
ScrFI CCNGG 1 cut(s) 635
SduI GDGCHC 2 cut(s) 993, 1302
SfaNI GCATC 3 cut(s) 157, 474, 1186
Sfr274I CTCGAG 1 cut(s) 1328
SfuI TTCGAA 2 cut(s) 939, 1088
SinI GGWCC 1 cut(s) 524
SlaI CTCGAG 1 cut(s) 1328
SmiMI CAYNNNNRTG 2 cut(s) 179, 1059
SmlI CTYRAG 3 cut(s) 992, 1280, 1328
SmoI CTYRAG 3 cut(s) 992, 1280, 1328
Sse9I AATT 8 cut(s) 329, 721, 855, 935, 1183, 1212, 1358, 1388
SspMI CTAG 1 cut(s) 954
SstI GAGCTC 1 cut(s) 993
StyD4I CCNGG 1 cut(s) 633
StyI CCWWGG 2 cut(s) 868, 1476
TaaI ACNGT 5 cut(s) 130, 743, 755, 763, 1161
TaiI ACGT 2 cut(s) 249, 600
TaqI TCGA 9 cut(s) 92, 392, 551, 600, 660, 939, 1088, 1104, 1329
TaqII GACCGA 1 cut(s) 529
TasI AATT 8 cut(s) 329, 721, 855, 935, 1183, 1212, 1358, 1388
TatI WGTACW 2 cut(s) 190, 1320
TauI GCSGC 2 cut(s) 407, 518
TfiI GAWTC 1 cut(s) 104
Tru1I TTAA 4 cut(s) 822, 1281, 1391, 1418
Tru9I TTAA 4 cut(s) 822, 1281, 1391, 1418
TscAI CASTG 3 cut(s) 133, 181, 815
TseFI GTSAC 3 cut(s) 68, 737, 875
TseI GCWGC 3 cut(s) 212, 316, 1231
Tsp45I GTSAC 3 cut(s) 68, 737, 875
TspDTI ATGAA 5 cut(s) 35, 294, 794, 1043, 1177
TspGWI ACGGA 1 cut(s) 743
TspRI CASTG 3 cut(s) 133, 181, 815
Vha464I CTTAAG 1 cut(s) 1280
VpaK11BI GGWCC 1 cut(s) 524
XagI CCTNNNNNAGG 1 cut(s) 1493
XapI RAATTY 1 cut(s) 935
XceI RCATGY 1 cut(s) 1264
XcmI CCANNNNNNNNNTGG 1 cut(s) 1135
XhoI CTCGAG 1 cut(s) 1328
XspI CTAG 1 cut(s) 954
Zsp2I ATGCAT 1 cut(s) 1201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.